IVF0026090 (gene) Melon (IVF77) v1

Overview


Name	IVF0026090
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Anaphase-promoting complex subunit 4
Location	chr02: 15536472 .. 15540032 (+)
RNA-Seq Expression	IVF0026090
Synteny	IVF0026090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACCAAGTTTCAACATTGAATCATGGTAAAACATGAAGTGTCCAAATTATCAACTCATAGATTAAAGAGGGTTATGTTGGCTGGTATATTGCTTTGGTTCTTATGCTCTGTCGAGCACATTTTATTTTGGTTCTTACTCTAAGTTGTTCCTCGATAATTTGCATTTTGTGATTAAACATTTACATTAATCCTCACCATCACGGTTAGCACTGCTATACTAAAAGAAATAAACTTAAGACCAGATGCCTGGTGCAGTCTGGTGGTCAGTTCCATTCCATGCATCCTCCCATAAGCTTATGAGCGGATGTCTGGTGCAGTCTGGTGGTCAATTACATTCCATGCATCCTCCCATAAGCTTATTGGCCACGAGATTGCAATCTCGTACTTAAGAAGAAATATGAATGATGGAGAGACAGAGAAGTGGGGTAGATTACTTTTGACAGAGAGTTTTTAGCCCAACCTAGAAGGACCCTAGGAAGTGCTTCTTTCTCTCACGTTGGGCATACCTGGTTCCCTGTAGGAAGGAAAGGAAAGGAAGGAAACATCCTCTTTCTCTTTGGAATACTTGCGTATAAGAATGTGGAGATTCAGTTATGTTCTGCCCTGTTTGTAGTAAGGTTTATATGCCTTTTATTGTTTCAAACAAGGTCTTTGGATGTAGAATTTGCAAATGAATGAGAATATTTTTTCCTTTTGGTGTACATATGTATGTGTGTCAATAGATTATGGTGGCATACTTATGTGGTAAAGAGATCTATCTCTTAGATATCCTGATTTCTGTTCAAAATAGATTGTGTCAGCATGAATCTGCATTGAACGATACCTTAAAGAAAGGAAAATAGTGAATATATGGTTTTGATGGAAATCTGGGAATCAGAGAAAACATCGAAGTTCTGTATTGTCTACTCTTGGCATGATGAGGACTAAAATTCTCAAGTTTCATAACGTTCTCAAATTCATCTTTTCCATAAGAATAACATTAATGACCCAACATTGTAACTGTCCAGCATGATTTCTTTGATTGCCCCACTTCTAGAGGTATCTGGTCAGAGGTTTTTTCTGCCTTCAATTGGTTTGTTGCTTTTCCAAGTGATACTGTCAACTGTGTTAGCCCCGATTGTTGATCATCTATCCACCTTTGAAGCTGCCAAAGAACGTTTATGATTATGCATTATTTGTGCTGTTTTGTGGAAAATATGGGAGGAAAGAAATGCTAGAATCTTCTGGGATAAGAACAAGAAAACCAAGGATATAATAGATACTATCATTCAGAACGTCGTTTTTGGTGCAAAGATACAGTTGCCGTACATAGTCATAGTTCTTTCCTTGCAAATTAGAAACACATTTTGTACAGATTGGGCCCCTTTTGTATACTCTTTGATTGAGTTCCTGTTTCATTGATTGAGTTCCTGTTTCATTCAATCAATGAAATTATTTCTTATATATAAAAAAACAGAACATGTCTCTGACTCTAAGAGGCATTTGGCTCTCAAGTTGGGTTGGGTTGGGTAAAAGAGACCCCCCCTCCCCAGTCCCCACCTTTTGGTTTGCCAATAATTAAATAGGTGGTTATTCAACCCACCTATGTCAATATAGAAGAAAATTTACCCAAAAAAAAAAAGAAAACCGTTGTGGGAAGGTATCACCCTCCTAAAGGGATTCTTAAGAAACGCCCAACGATGTTAACCTTTTTTTTTTTGATCCAGTACTATTATGCATTAATTACTCTCGTAGTCCTTCCACATATCTTTAAGCAATAAACTGGTGATCAAATTTTCACACCGATATTTCTTTAAGAGCTCGTTGTAGATCAGAATAGTTAAGAATTTACAAATACGTACTCGGTATTTCCTTAAACTGTTATCTAACCATTGATTTACTTCCACAGTTTTAAGGAAGCTTTTCTTATGCCCTTTATTACAATCTCAAGAAAAATACTTTGTGAAGATATAATATCCCTGTTCCCCTTTCCATCCTCGTCAAGTTGCCTGTCTTCACATGTTCCTCTCTCCGTTTCATACTATGAGGTATTTATTCTGCTATTGAGCTGTTCTATTTATGCTTGTCTCTTGTTTACTTTTTTACTGAGGTTTGGCAGTTGTTCACACAACGAGTCGATTGTTATACAACTATTATCCTCAATGTTAATTGTTAATAAGTAGTTTTTATTACCATGGCTAACAGTTTTTGAAGGCATGATGTCCACTAATGCACACTGTTCCTTTCGATATGGCGTTTGTTAATTTTTCAATTTGCTTTTAAACCCCATATAGGATTCCTCTGAAGTTGTTCCTGCCGATCTAAGTTGTGAGCAGAAGTTTATAGATTATATATCTTTCAGAGTCCCCGATGATTCTTTTGCAGAAATTGCAAATTGTGTAGGCATAGTCAGGAGATTCATCCATGACCAGAGCTGCTCAAACGAGGACCATTCCTCATCGGAAGCAGTCTTAATATCTATTCCTGATGGTTCTCAGTGTGTTGATCTTTCTTTGTACAAGGTAATGGTTCAAGTTAGCAAGCTTTTATTCTCTGCACCCTAGTTATATATATAAAGAAGAGGGTAAAAGATTGACAGATCCTGTGTGAATAATCTGTGAACCTATTTGGTTGTAAACAGGATGGACAGATTGTTTTGTTATTAAATGAAACTGCTTCTACTCCTGAAAGCTCTGTTGGTTCCTATATGATGGTTGTGCAAGTAGATGACCTTCCGTTTGTATCTGTGCCAAGATCTCCCTGTCTGGACAATTGGAAGATCCTTCAACTTAAGGTTTTCCCTTTTGCTTAAATCTCATTGAAAAGATTCATCATGAGTGTATAGTCTTTCATACAACCATTATTTCTGAAGTCAATTCCCCAAAGATTACTTCATATCTTCATAAATCGACTTCTGCAAATGTGCTATAATGCAAGGGCTTAATCTGATTTAAATGTAATTAATTCTTCCAGCTCGGATGTTAATTAGAATTATATCTTTTAGTGGCTCATAAAAGAAAATTTATACATCTTTTAAATATCCTGGAGATGGGAGGTTTTCTATAGGTTTCATCCTCAAAATGTTATTTTTTCTTGTATTAATGTTCCTTTTCTTCTCTAGGATAATGTTGTCCCTCTGCAAATGGAGAATGAGAAAGTTCGCAACATTTCTCATGCTGTCATTTCTCCTTTGGCTGTTAGTGGTGAGTGTTCATCGTTGTAGTATTTTTTTACTATTTTATGTATACTAATGGTGTGTTTGGAATACATTTTTAAATGTTTAAATTAAAAAAAAAACAAGTTTTTTTCTTTAACAAATTTGAGTATTTGACGATCACTCAAAATAGCTTTTAAAATACTTTTAAACCGTTTTTATCAAAAGAGTTTAAATAAAATTAAATTTTAAGAAACACTTTTCTCTGGTCAATCAATCCAAATGGGTTTAAATGTTATCAATATAAGCACTTGGTGTTCTTGTTCCAGCATCAAGAGGAGTGGCTTGTGTTTTTGCTGCGAGAAAGCGAGCGTTGGTCTACATCCTAGAGGAAGATGAGGATGACGTATCAGATGCTGAGTGA

mRNA sequence

ATGAAACCAAGTTTCAACATTGAATCATGTTTTAAGGAAGCTTTTCTTATGCCCTTTATTACAATCTCAAGAAAAATACTTTGTGAAGATATAATATCCCTGTTCCCCTTTCCATCCTCGTCAAGTTGCCTGTCTTCACATGTTCCTCTCTCCGTTTCATACTATGAGGATTCCTCTGAAGTTGTTCCTGCCGATCTAAGTTGTGAGCAGAAGTTTATAGATTATATATCTTTCAGAGTCCCCGATGATTCTTTTGCAGAAATTGCAAATTGTGTAGGCATAGTCAGGAGATTCATCCATGACCAGAGCTGCTCAAACGAGGACCATTCCTCATCGGAAGCAGTCTTAATATCTATTCCTGATGGTTCTCAGTGTGTTGATCTTTCTTTGTACAAGGATGGACAGATTGTTTTGTTATTAAATGAAACTGCTTCTACTCCTGAAAGCTCTGTTGGTTCCTATATGATGGTTGTGCAAGTAGATGACCTTCCGTTTGTATCTGTGCCAAGATCTCCCTGTCTGGACAATTGGAAGATCCTTCAACTTAAGGATAATGTTGTCCCTCTGCAAATGGAGAATGAGAAAGTTCGCAACATTTCTCATGCTGTCATTTCTCCTTTGGCTGTTAGTGCATCAAGAGGAGTGGCTTGTGTTTTTGCTGCGAGAAAGCGAGCGTTGGTCTACATCCTAGAGGAAGATGAGGATGACGTATCAGATGCTGAGTGA

Coding sequence (CDS)

ATGAAACCAAGTTTCAACATTGAATCATGTTTTAAGGAAGCTTTTCTTATGCCCTTTATTACAATCTCAAGAAAAATACTTTGTGAAGATATAATATCCCTGTTCCCCTTTCCATCCTCGTCAAGTTGCCTGTCTTCACATGTTCCTCTCTCCGTTTCATACTATGAGGATTCCTCTGAAGTTGTTCCTGCCGATCTAAGTTGTGAGCAGAAGTTTATAGATTATATATCTTTCAGAGTCCCCGATGATTCTTTTGCAGAAATTGCAAATTGTGTAGGCATAGTCAGGAGATTCATCCATGACCAGAGCTGCTCAAACGAGGACCATTCCTCATCGGAAGCAGTCTTAATATCTATTCCTGATGGTTCTCAGTGTGTTGATCTTTCTTTGTACAAGGATGGACAGATTGTTTTGTTATTAAATGAAACTGCTTCTACTCCTGAAAGCTCTGTTGGTTCCTATATGATGGTTGTGCAAGTAGATGACCTTCCGTTTGTATCTGTGCCAAGATCTCCCTGTCTGGACAATTGGAAGATCCTTCAACTTAAGGATAATGTTGTCCCTCTGCAAATGGAGAATGAGAAAGTTCGCAACATTTCTCATGCTGTCATTTCTCCTTTGGCTGTTAGTGCATCAAGAGGAGTGGCTTGTGTTTTTGCTGCGAGAAAGCGAGCGTTGGTCTACATCCTAGAGGAAGATGAGGATGACGTATCAGATGCTGAGTGA

Protein sequence

MKPSFNIESCFKEAFLMPFITISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDHSSSEAVLISIPDGSQCVDLSLYKDGQIVLLLNETASTPESSVGSYMMVVQVDDLPFVSVPRSPCLDNWKILQLKDNVVPLQMENEKVRNISHAVISPLAVSASRGVACVFAARKRALVYILEEDEDDVSDAE

Homology

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BLAST of IVF0026090 vs. ExPASy Swiss-Prot
Match: O65418 (Anaphase-promoting complex subunit 4 OS=Arabidopsis thaliana OX=3702 GN=APC4 PE=2 SV=2)

HSP 1 Score: 233.0 bits (593), Expect = 3.5e-60
Identity = 121/235 (51.49%), Postives = 170/235 (72.34%), Query Frame = 0


Query: 6   NIESCFKEAFLMPFITISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPAD 65
           ++ES FK AF MPF TISRKI C  ++ L P   S++   + +P+S+S+Y++    +  D
Sbjct: 544 HMESSFKMAFQMPFTTISRKISCMKLLPLCPLQLSTTQTPTTIPMSLSFYKNE---LSDD 603

Query: 66  LSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDHSSSEAVLISIPDGSQC 125
             C+  + DYISF+VPD++F EI+NC+GI + +  + +     ++S EAVL+S+P+G  C
Sbjct: 604 TPCQSGYTDYISFQVPDETFPEISNCIGIAKGYKQNSNNEKNGYTSLEAVLLSVPNGYTC 663

Query: 126 VDLSLYKDGQIVLLLNETASTPESSVGSYMMVVQVDDLPFVSVPRSPCLDNWKILQLKDN 185
           VDLSLYKD ++VLLLN+T +  E S  + MMVVQ  DL F+S+  S  L+ W++  LK +
Sbjct: 664 VDLSLYKDKELVLLLNKTNTDSEGSGEACMMVVQTGDLAFISISGSSSLNQWELEDLKGS 723

Query: 186 VVPLQMENEKVRNISHAVISPLAVSASRGVACVFAARKRALVYILEEDED-DVSD 240
           +V L+MENEKVR + H+VI+PLAVSASRGVACVFA R+RALVYILEEDED ++SD
Sbjct: 724 IVNLEMENEKVRKVPHSVIAPLAVSASRGVACVFAERRRALVYILEEDEDEEISD 775

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BLAST of IVF0026090 vs. ExPASy TrEMBL
Match: A0A5D3BMY3 (Anaphase-promoting complex subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold596G00330 PE=4 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 1.3e-123
Identity = 231/235 (98.30%), Postives = 233/235 (99.15%), Query Frame = 0


Query: 7   IESCFKEAFLMPFITISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADL 66
           +ES FKEAFLMPFITISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADL
Sbjct: 610 MESSFKEAFLMPFITISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADL 669

Query: 67  SCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDHSSSEAVLISIPDGSQCV 126
           SCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDHSSSEAVLISIPDG QCV
Sbjct: 670 SCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDHSSSEAVLISIPDGCQCV 729

Query: 127 DLSLYKDGQIVLLLNETASTPESSVGSYMMVVQVDDLPFVSVPRSPCLDNWKILQLKDNV 186
           DLSLYKDGQIVLLLNETASTPESSVGSYMMVVQVDDLPFVSVPRSPCLDNWKILQLKDNV
Sbjct: 730 DLSLYKDGQIVLLLNETASTPESSVGSYMMVVQVDDLPFVSVPRSPCLDNWKILQLKDNV 789

Query: 187 VPLQMENEKVRNISHAVISPLAVSASRGVACVFAARKRALVYILEEDEDDVSDAE 242
           VPLQMENEKVRNISHAVISPLAVSASRGVACVFAARKRALVYILEEDED+VSDAE
Sbjct: 790 VPLQMENEKVRNISHAVISPLAVSASRGVACVFAARKRALVYILEEDEDEVSDAE 844

[Close]

BLAST of IVF0026090 vs. ExPASy TrEMBL
Match: A0A5A7TZ68 (Anaphase-promoting complex subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001730 PE=4 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 8.7e-123
Identity = 230/235 (97.87%), Postives = 233/235 (99.15%), Query Frame = 0


Query: 7   IESCFKEAFLMPFITISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADL 66
           +ES FKEAFLMPFITISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADL
Sbjct: 604 MESSFKEAFLMPFITISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADL 663

Query: 67  SCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDHSSSEAVLISIPDGSQCV 126
           SCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDHSSSEAVLISIPDGSQCV
Sbjct: 664 SCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDHSSSEAVLISIPDGSQCV 723

Query: 127 DLSLYKDGQIVLLLNETASTPESSVGSYMMVVQVDDLPFVSVPRSPCLDNWKILQLKDNV 186
           DLSLYKDGQIVLLLNETAST ESSVGSYMMVV+VDDLPFVSVPRSPCLDNWKILQLKDNV
Sbjct: 724 DLSLYKDGQIVLLLNETASTSESSVGSYMMVVKVDDLPFVSVPRSPCLDNWKILQLKDNV 783

Query: 187 VPLQMENEKVRNISHAVISPLAVSASRGVACVFAARKRALVYILEEDEDDVSDAE 242
           VPLQMENEKVRNISHAVISPLAVSASRGVACVFAARKRALVYILEEDED+VSDAE
Sbjct: 784 VPLQMENEKVRNISHAVISPLAVSASRGVACVFAARKRALVYILEEDEDEVSDAE 838

[Close]

BLAST of IVF0026090 vs. ExPASy TrEMBL
Match: A0A1S3CJ41 (Anaphase-promoting complex subunit 4 OS=Cucumis melo OX=3656 GN=LOC103501540 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 3.3e-122
Identity = 229/235 (97.45%), Postives = 233/235 (99.15%), Query Frame = 0


Query: 7   IESCFKEAFLMPFITISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADL 66
           +ES FKEAFLMPFITISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADL
Sbjct: 540 MESSFKEAFLMPFITISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADL 599

Query: 67  SCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDHSSSEAVLISIPDGSQCV 126
           SCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDHSSSEAVLISIPDGSQCV
Sbjct: 600 SCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDHSSSEAVLISIPDGSQCV 659

Query: 127 DLSLYKDGQIVLLLNETASTPESSVGSYMMVVQVDDLPFVSVPRSPCLDNWKILQLKDNV 186
           DLSLYKDGQIVLLLNETAST ESSVGSYMMVV+VDDLPFVSVPRSPCLDNWKILQLKDNV
Sbjct: 660 DLSLYKDGQIVLLLNETASTSESSVGSYMMVVKVDDLPFVSVPRSPCLDNWKILQLKDNV 719

Query: 187 VPLQMENEKVRNISHAVISPLAVSASRGVACVFAARKRALVYILEEDEDDVSDAE 242
           VPLQMENEKVRNISHAVISPLAVSASRGVACVFAARKRALVYILEE+ED+VSDAE
Sbjct: 720 VPLQMENEKVRNISHAVISPLAVSASRGVACVFAARKRALVYILEENEDEVSDAE 774

[Close]

BLAST of IVF0026090 vs. ExPASy TrEMBL
Match: A0A0A0LWY6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G385570 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 4.8e-121
Identity = 227/235 (96.60%), Postives = 231/235 (98.30%), Query Frame = 0


Query: 7   IESCFKEAFLMPFITISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADL 66
           +ES FK+AFLMPFITISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVV ADL
Sbjct: 1   MESSFKDAFLMPFITISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVSADL 60

Query: 67  SCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDHSSSEAVLISIPDGSQCV 126
           SCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDHSSSEAVLISIPDGSQCV
Sbjct: 61  SCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDHSSSEAVLISIPDGSQCV 120

Query: 127 DLSLYKDGQIVLLLNETASTPESSVGSYMMVVQVDDLPFVSVPRSPCLDNWKILQLKDNV 186
           DLSLYKDGQIVLLLNETAST ESSVGSYMMVVQVDDLPFVS+PRSPCLDNWKILQLKDNV
Sbjct: 121 DLSLYKDGQIVLLLNETASTSESSVGSYMMVVQVDDLPFVSMPRSPCLDNWKILQLKDNV 180

Query: 187 VPLQMENEKVRNISHAVISPLAVSASRGVACVFAARKRALVYILEEDEDDVSDAE 242
           VPLQMENEKVRNISHAVI PLAVSASRGVACVFAARKRALVYILEEDED+VSDAE
Sbjct: 181 VPLQMENEKVRNISHAVIPPLAVSASRGVACVFAARKRALVYILEEDEDEVSDAE 235

[Close]

BLAST of IVF0026090 vs. ExPASy TrEMBL
Match: A0A6J1IJW1 (Anaphase-promoting complex subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC111478105 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.5e-106
Identity = 200/235 (85.11%), Postives = 215/235 (91.49%), Query Frame = 0


Query: 7   IESCFKEAFLMPFITISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPADL 66
           +ES FKEAFLMPF TISRKILCED++SLFP  SSSSCLSS VPLSVSYYEDSSE V ADL
Sbjct: 540 MESSFKEAFLMPFSTISRKILCEDLLSLFPLQSSSSCLSSSVPLSVSYYEDSSEAVSADL 599

Query: 67  SCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDHSSSEAVLISIPDGSQCV 126
           SC+QKFIDYISF+VPDDSF +IANC+GI R FIHDQSCSNED+SS EAVLISIPDGS+CV
Sbjct: 600 SCQQKFIDYISFKVPDDSFTDIANCIGIARGFIHDQSCSNEDYSSFEAVLISIPDGSRCV 659

Query: 127 DLSLYKDGQIVLLLNETASTPESSVGSYMMVVQVDDLPFVSVPRSPCLDNWKILQLKDNV 186
           DLSLYKDGQIVLLLNETAST ESSVGSYMM++Q D+LPFVS+PRSPCL NWK+ QLKD V
Sbjct: 660 DLSLYKDGQIVLLLNETASTSESSVGSYMMIMQADELPFVSMPRSPCLINWKVHQLKDYV 719

Query: 187 VPLQMENEKVRNISHAVISPLAVSASRGVACVFAARKRALVYILEEDEDDVSDAE 242
           VPLQMENEKVRNI HAVI PLAVSASRGVACVFAARKRALVYILEEDED+ SD E
Sbjct: 720 VPLQMENEKVRNIPHAVIPPLAVSASRGVACVFAARKRALVYILEEDEDEASDGE 774

[Close]

BLAST of IVF0026090 vs. NCBI nr
Match: TYK00082.1 (anaphase-promoting complex subunit 4 [Cucumis melo var. makuwa])

HSP 1 Score: 453 bits (1166), Expect = 7.76e-152
Identity = 231/236 (97.88%), Postives = 233/236 (98.73%), Query Frame = 0


Query: 6   NIESCFKEAFLMPFITISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPAD 65
            +ES FKEAFLMPFITISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPAD
Sbjct: 609 QMESSFKEAFLMPFITISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPAD 668

Query: 66  LSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDHSSSEAVLISIPDGSQC 125
           LSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDHSSSEAVLISIPDG QC
Sbjct: 669 LSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDHSSSEAVLISIPDGCQC 728

Query: 126 VDLSLYKDGQIVLLLNETASTPESSVGSYMMVVQVDDLPFVSVPRSPCLDNWKILQLKDN 185
           VDLSLYKDGQIVLLLNETASTPESSVGSYMMVVQVDDLPFVSVPRSPCLDNWKILQLKDN
Sbjct: 729 VDLSLYKDGQIVLLLNETASTPESSVGSYMMVVQVDDLPFVSVPRSPCLDNWKILQLKDN 788

Query: 186 VVPLQMENEKVRNISHAVISPLAVSASRGVACVFAARKRALVYILEEDEDDVSDAE 241
           VVPLQMENEKVRNISHAVISPLAVSASRGVACVFAARKRALVYILEEDED+VSDAE
Sbjct: 789 VVPLQMENEKVRNISHAVISPLAVSASRGVACVFAARKRALVYILEEDEDEVSDAE 844

[Close]

BLAST of IVF0026090 vs. NCBI nr
Match: XP_008463366.1 (PREDICTED: anaphase-promoting complex subunit 4 [Cucumis melo])

HSP 1 Score: 449 bits (1154), Expect = 7.12e-151
Identity = 229/236 (97.03%), Postives = 233/236 (98.73%), Query Frame = 0


Query: 6   NIESCFKEAFLMPFITISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPAD 65
            +ES FKEAFLMPFITISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPAD
Sbjct: 539 QMESSFKEAFLMPFITISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPAD 598

Query: 66  LSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDHSSSEAVLISIPDGSQC 125
           LSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDHSSSEAVLISIPDGSQC
Sbjct: 599 LSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDHSSSEAVLISIPDGSQC 658

Query: 126 VDLSLYKDGQIVLLLNETASTPESSVGSYMMVVQVDDLPFVSVPRSPCLDNWKILQLKDN 185
           VDLSLYKDGQIVLLLNETAST ESSVGSYMMVV+VDDLPFVSVPRSPCLDNWKILQLKDN
Sbjct: 659 VDLSLYKDGQIVLLLNETASTSESSVGSYMMVVKVDDLPFVSVPRSPCLDNWKILQLKDN 718

Query: 186 VVPLQMENEKVRNISHAVISPLAVSASRGVACVFAARKRALVYILEEDEDDVSDAE 241
           VVPLQMENEKVRNISHAVISPLAVSASRGVACVFAARKRALVYILEE+ED+VSDAE
Sbjct: 719 VVPLQMENEKVRNISHAVISPLAVSASRGVACVFAARKRALVYILEENEDEVSDAE 774

[Close]

BLAST of IVF0026090 vs. NCBI nr
Match: KAA0046621.1 (anaphase-promoting complex subunit 4 [Cucumis melo var. makuwa])

HSP 1 Score: 451 bits (1159), Expect = 7.42e-151
Identity = 230/236 (97.46%), Postives = 233/236 (98.73%), Query Frame = 0


Query: 6   NIESCFKEAFLMPFITISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPAD 65
            +ES FKEAFLMPFITISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPAD
Sbjct: 603 QMESSFKEAFLMPFITISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPAD 662

Query: 66  LSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDHSSSEAVLISIPDGSQC 125
           LSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDHSSSEAVLISIPDGSQC
Sbjct: 663 LSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDHSSSEAVLISIPDGSQC 722

Query: 126 VDLSLYKDGQIVLLLNETASTPESSVGSYMMVVQVDDLPFVSVPRSPCLDNWKILQLKDN 185
           VDLSLYKDGQIVLLLNETAST ESSVGSYMMVV+VDDLPFVSVPRSPCLDNWKILQLKDN
Sbjct: 723 VDLSLYKDGQIVLLLNETASTSESSVGSYMMVVKVDDLPFVSVPRSPCLDNWKILQLKDN 782

Query: 186 VVPLQMENEKVRNISHAVISPLAVSASRGVACVFAARKRALVYILEEDEDDVSDAE 241
           VVPLQMENEKVRNISHAVISPLAVSASRGVACVFAARKRALVYILEEDED+VSDAE
Sbjct: 783 VVPLQMENEKVRNISHAVISPLAVSASRGVACVFAARKRALVYILEEDEDEVSDAE 838

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BLAST of IVF0026090 vs. NCBI nr
Match: XP_011656470.1 (anaphase-promoting complex subunit 4 [Cucumis sativus] >KAE8653136.1 hypothetical protein Csa_019535 [Cucumis sativus])

HSP 1 Score: 445 bits (1144), Expect = 2.28e-149
Identity = 227/236 (96.19%), Postives = 231/236 (97.88%), Query Frame = 0


Query: 6   NIESCFKEAFLMPFITISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPAD 65
            +ES FK+AFLMPFITISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVV AD
Sbjct: 539 QMESSFKDAFLMPFITISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVSAD 598

Query: 66  LSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDHSSSEAVLISIPDGSQC 125
           LSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDHSSSEAVLISIPDGSQC
Sbjct: 599 LSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDHSSSEAVLISIPDGSQC 658

Query: 126 VDLSLYKDGQIVLLLNETASTPESSVGSYMMVVQVDDLPFVSVPRSPCLDNWKILQLKDN 185
           VDLSLYKDGQIVLLLNETAST ESSVGSYMMVVQVDDLPFVS+PRSPCLDNWKILQLKDN
Sbjct: 659 VDLSLYKDGQIVLLLNETASTSESSVGSYMMVVQVDDLPFVSMPRSPCLDNWKILQLKDN 718

Query: 186 VVPLQMENEKVRNISHAVISPLAVSASRGVACVFAARKRALVYILEEDEDDVSDAE 241
           VVPLQMENEKVRNISHAVI PLAVSASRGVACVFAARKRALVYILEEDED+VSDAE
Sbjct: 719 VVPLQMENEKVRNISHAVIPPLAVSASRGVACVFAARKRALVYILEEDEDEVSDAE 774

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BLAST of IVF0026090 vs. NCBI nr
Match: KAG7033900.1 (Anaphase-promoting complex subunit 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 401 bits (1030), Expect = 1.14e-134
Identity = 203/238 (85.29%), Postives = 218/238 (91.60%), Query Frame = 0


Query: 4   SFNIESCFKEAFLMPFITISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVP 63
           +FNIE  FKEAFLMPF TISRKILCED++SLFP  SSSSCLSS VPLSVSYYEDSSEVV 
Sbjct: 341 NFNIELRFKEAFLMPFSTISRKILCEDLLSLFPLQSSSSCLSSSVPLSVSYYEDSSEVVS 400

Query: 64  ADLSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDHSSSEAVLISIPDGS 123
           ADLSC+QKFIDYISF+VPDDSF +IANC+GI R FIHDQSCSNED+SS EAVLISIPDGS
Sbjct: 401 ADLSCQQKFIDYISFKVPDDSFTDIANCIGIARGFIHDQSCSNEDYSSFEAVLISIPDGS 460

Query: 124 QCVDLSLYKDGQIVLLLNETASTPESSVGSYMMVVQVDDLPFVSVPRSPCLDNWKILQLK 183
           +CVDLSLYKDGQIVLLLNETAST ESSVGSYMM++Q D+LPFVS+PRSPCL NWK+ QLK
Sbjct: 461 RCVDLSLYKDGQIVLLLNETASTSESSVGSYMMIMQADELPFVSMPRSPCLINWKVHQLK 520

Query: 184 DNVVPLQMENEKVRNISHAVISPLAVSASRGVACVFAARKRALVYILEEDEDDVSDAE 241
           D VVPLQMENEKVRNI HAVI PLAVSASRGVACVFAARKRALVYILEEDED+ SD E
Sbjct: 521 DYVVPLQMENEKVRNIPHAVIPPLAVSASRGVACVFAARKRALVYILEEDEDEASDGE 578

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BLAST of IVF0026090 vs. TAIR 10
Match: AT4G21530.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 233.0 bits (593), Expect = 2.5e-61
Identity = 121/235 (51.49%), Postives = 170/235 (72.34%), Query Frame = 0


Query: 6   NIESCFKEAFLMPFITISRKILCEDIISLFPFPSSSSCLSSHVPLSVSYYEDSSEVVPAD 65
           ++ES FK AF MPF TISRKI C  ++ L P   S++   + +P+S+S+Y++    +  D
Sbjct: 544 HMESSFKMAFQMPFTTISRKISCMKLLPLCPLQLSTTQTPTTIPMSLSFYKNE---LSDD 603

Query: 66  LSCEQKFIDYISFRVPDDSFAEIANCVGIVRRFIHDQSCSNEDHSSSEAVLISIPDGSQC 125
             C+  + DYISF+VPD++F EI+NC+GI + +  + +     ++S EAVL+S+P+G  C
Sbjct: 604 TPCQSGYTDYISFQVPDETFPEISNCIGIAKGYKQNSNNEKNGYTSLEAVLLSVPNGYTC 663

Query: 126 VDLSLYKDGQIVLLLNETASTPESSVGSYMMVVQVDDLPFVSVPRSPCLDNWKILQLKDN 185
           VDLSLYKD ++VLLLN+T +  E S  + MMVVQ  DL F+S+  S  L+ W++  LK +
Sbjct: 664 VDLSLYKDKELVLLLNKTNTDSEGSGEACMMVVQTGDLAFISISGSSSLNQWELEDLKGS 723

Query: 186 VVPLQMENEKVRNISHAVISPLAVSASRGVACVFAARKRALVYILEEDED-DVSD 240
           +V L+MENEKVR + H+VI+PLAVSASRGVACVFA R+RALVYILEEDED ++SD
Sbjct: 724 IVNLEMENEKVRKVPHSVIAPLAVSASRGVACVFAERRRALVYILEEDEDEEISD 775

The following BLAST results are available for this feature:

BLAST of IVF0026090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65418	3.5e-60	51.49	Anaphase-promoting complex subunit 4 OS=Arabidopsis thaliana OX=3702 GN=APC4 PE=...	[more]

BLAST of IVF0026090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BMY3	1.3e-123	98.30	Anaphase-promoting complex subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5A7TZ68	8.7e-123	97.87	Anaphase-promoting complex subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3CJ41	3.3e-122	97.45	Anaphase-promoting complex subunit 4 OS=Cucumis melo OX=3656 GN=LOC103501540 PE=...	[more]
A0A0A0LWY6	4.8e-121	96.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G385570 PE=4 SV=1	[more]
A0A6J1IJW1	1.5e-106	85.11	Anaphase-promoting complex subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC111478105...	[more]

BLAST of IVF0026090 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK00082.1	7.76e-152	97.88	anaphase-promoting complex subunit 4 [Cucumis melo var. makuwa]	[more]
XP_008463366.1	7.12e-151	97.03	PREDICTED: anaphase-promoting complex subunit 4 [Cucumis melo]	[more]
KAA0046621.1	7.42e-151	97.46	anaphase-promoting complex subunit 4 [Cucumis melo var. makuwa]	[more]
XP_011656470.1	2.28e-149	96.19	anaphase-promoting complex subunit 4 [Cucumis sativus] >KAE8653136.1 hypothetica...	[more]
KAG7033900.1	1.14e-134	85.29	Anaphase-promoting complex subunit 4, partial [Cucurbita argyrosperma subsp. arg...	[more]

BLAST of IVF0026090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21530.1	2.5e-61	51.49	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024789	Anaphase-promoting complex subunit 4	PANTHER	PTHR13260	ANAPHASE PROMOTING COMPLEX SUBUNIT 4 APC4	coord: 7..237

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0026090.1	IVF0026090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031145	anaphase-promoting complex-dependent catabolic process
biological_process	GO:0051301	cell division
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0048481	plant ovule development
biological_process	GO:0030071	regulation of mitotic metaphase/anaphase transition
cellular_component	GO:0005680	anaphase-promoting complex