IVF0026074 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTTATTGTCTACTCCATGATTTAATAAATCTTGAGATGACGAATGCTGACATATTGGACGACAAAGATAAGGGTGACTCGACATACACAACTACTAGCGATGACAACATCAACTACATTGAGGCCTCAAACAAATGGACTCAATGGAGAGATGCCCTTGCGGAATTGATGTTCAACGAATGGCAGTTGCCTAATGATTAG ATGACTTATTGTCTACTCCATGATTTAATAAATCTTGAGATGACGAATGCTGACATATTGGACGACAAAGATAAGGGTGACTCGACATACACAACTACTAGCGATGACAACATCAACTACATTGAGGCCTCAAACAAATGGACTCAATGGAGAGATGCCCTTGCGGAATTGATGTTCAACGAATGGCAGTTGCCTAATGATTAG ATGACTTATTGTCTACTCCATGATTTAATAAATCTTGAGATGACGAATGCTGACATATTGGACGACAAAGATAAGGGTGACTCGACATACACAACTACTAGCGATGACAACATCAACTACATTGAGGCCTCAAACAAATGGACTCAATGGAGAGATGCCCTTGCGGAATTGATGTTCAACGAATGGCAGTTGCCTAATGATTAG MTYCLLHDLINLEMTNADILDDKDKGDSTYTTTSDDNINYIEASNKWTQWRDALAELMFNEWQLPND Homology
BLAST of IVF0026074 vs. ExPASy TrEMBL
Match: A0A5D3BZZ3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G002080 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 8.1e-18 Identity = 47/59 (79.66%), Postives = 52/59 (88.14%), Query Frame = 0
BLAST of IVF0026074 vs. ExPASy TrEMBL
Match: A0A5D3DG22 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold523G00290 PE=3 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 6.8e-17 Identity = 42/64 (65.62%), Postives = 53/64 (82.81%), Query Frame = 0
BLAST of IVF0026074 vs. ExPASy TrEMBL
Match: A0A5A7V6M3 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold178G00030 PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 3.4e-16 Identity = 41/64 (64.06%), Postives = 52/64 (81.25%), Query Frame = 0
BLAST of IVF0026074 vs. ExPASy TrEMBL
Match: A0A5D3CHV9 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G00220 PE=3 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 9.8e-16 Identity = 41/64 (64.06%), Postives = 52/64 (81.25%), Query Frame = 0
BLAST of IVF0026074 vs. ExPASy TrEMBL
Match: A0A5D3BQ11 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00510 PE=3 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.3e-15 Identity = 42/66 (63.64%), Postives = 54/66 (81.82%), Query Frame = 0
BLAST of IVF0026074 vs. NCBI nr
Match: XP_031742024.1 (uncharacterized protein LOC105435527 [Cucumis sativus] >KAE8648564.1 hypothetical protein Csa_009116 [Cucumis sativus]) HSP 1 Score: 99.8 bits (247), Expect = 3.78e-24 Identity = 47/68 (69.12%), Postives = 54/68 (79.41%), Query Frame = 0
BLAST of IVF0026074 vs. NCBI nr
Match: KAA0051984.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK04574.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 100 bits (248), Expect = 3.86e-24 Identity = 47/59 (79.66%), Postives = 52/59 (88.14%), Query Frame = 0
BLAST of IVF0026074 vs. NCBI nr
Match: KAA0063753.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK05505.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 94.7 bits (234), Expect = 7.78e-22 Identity = 41/64 (64.06%), Postives = 52/64 (81.25%), Query Frame = 0
BLAST of IVF0026074 vs. NCBI nr
Match: TYK10940.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 93.2 bits (230), Expect = 1.05e-21 Identity = 41/64 (64.06%), Postives = 52/64 (81.25%), Query Frame = 0
BLAST of IVF0026074 vs. NCBI nr
Match: KAA0035628.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK30914.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 90.5 bits (223), Expect = 1.23e-21 Identity = 42/66 (63.64%), Postives = 54/66 (81.82%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|