IVF0026066 (gene) Melon (IVF77) v1

Overview


Name	IVF0026066
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	54S ribosomal protein L37
Location	chr10: 11991582 .. 11992924 (-)
RNA-Seq Expression	IVF0026066
Synteny	IVF0026066

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCCTGCTCCTATTTATCTATATGAAAAACGTGAGCTTTCTCTTTTCCTTATGTTTATTTATCCTGTTTGCTTCTTGCTCGAAAAAGGTTGTGTAGCAATGCTAAAGTCTTATAGTTTTCTTTTTCTCTTTAACACAAGTTAATTCTTCATCATTTTTGTTCCACTATTTAAATCGATACTCTGTTTCATATGGATCCCTACATTCCTACATCCCATTTGGGTTTGCTTGAGGACCCTAAAAGTTTGGGAAATTAGGCAGCAATTGATTTGATTGCAATTTAGGCAGATTGAGTGATATCTTTTGTTTTTCTTTTAGCTTCATTGGTAGATGTCTCCATTTGAGAGATCAACATTGTCCCATATTATATAATGTTGTATAGTTTATGTGATAAAGACATAAGCTATTGAGGAGAGAAATGGTTTCTAGTGAACAGAGATTTGGAAAGATGGTATTATGCACTATTCCCGACTCTCAAAAAGAAATGCAGAAGCTTTGCTATATAAAAAACAACTTATTTTTCATACTTCATACGTTCATACTCAAAACTTGATCCAGTAGAAAGTTGAAGAGGATGTGGCTGGTAAAGAAATTATTTATTTCCTTCTTTCTATGGATTGGAGTAACTACTAAGTTCTATTATACTTCAAGAAGAAGTTGTTTTGGCACATGTTTTCAAGAAGTTCAGACATTGTGATGCATTTTGTTTGTTTTTTTCTTTCTGTTTGAAACCATATCTGGAAGGTTTATGGTTAGCTTGTAAGATAAACAAGCCCTAAATTATACATGGCCTTCGAGGTGTTAGTGTTGTATCAAACTGTTGGATTCTTACTATAGCTGATTCAAAGAAAGATTGACTACCATAGCTGTTGAATTAGTTCATCAGAACTAATGAATTTGTTCGTTTTTGTGTTGCAGAGAAGAAAAATATGGGTTTGAACCAAATTAGTTTGTTTAGAAGAAGCATTATTGTCAATAGCAAAAACCTAATACAACTGACATCTGTTCGAACATTTGCTGCCGGAGGCAAATCAAAGAAGGGATCTAAAGGGGGTGCAGCTGCTAATGCTCCTAAAGCGTCGATACTAAGTAAAGAGGTGACGTCTACTACTGTAATTGGTGCCAAAATTCTCAAAGAAGTTGCAGACTCGAAAGTTATGGCAGACTCAAAGTACTACTCTGTTTGGCTGTGGCATTTGCTTGATAAACATCCACCTCTAAGCAAGCACATTGCGGAGGAAGAATGTCGAAACCCTTTCCTAACGGATCTCAAACGCTTTGGTAAATTGGATAGTCGAGAAAGAATCAAGGAAAACAGCTTTATTAAGGCCAAGAGTTGA

mRNA sequence

ATGCCTCCTGCTCCTATTTATCTATATGAAAAACAGAAGAAAAATATGGGTTTGAACCAAATTAGTTTGTTTAGAAGAAGCATTATTGTCAATAGCAAAAACCTAATACAACTGACATCTGTTCGAACATTTGCTGCCGGAGGCAAATCAAAGAAGGGATCTAAAGGGGGTGCAGCTGCTAATGCTCCTAAAGCGTCGATACTAAGTAAAGAGGTGACGTCTACTACTGTAATTGGTGCCAAAATTCTCAAAGAAGTTGCAGACTCGAAAGTTATGGCAGACTCAAAGTACTACTCTGTTTGGCTGTGGCATTTGCTTGATAAACATCCACCTCTAAGCAAGCACATTGCGGAGGAAGAATGTCGAAACCCTTTCCTAACGGATCTCAAACGCTTTGGTAAATTGGATAGTCGAGAAAGAATCAAGGAAAACAGCTTTATTAAGGCCAAGAGTTGA

Coding sequence (CDS)

ATGCCTCCTGCTCCTATTTATCTATATGAAAAACAGAAGAAAAATATGGGTTTGAACCAAATTAGTTTGTTTAGAAGAAGCATTATTGTCAATAGCAAAAACCTAATACAACTGACATCTGTTCGAACATTTGCTGCCGGAGGCAAATCAAAGAAGGGATCTAAAGGGGGTGCAGCTGCTAATGCTCCTAAAGCGTCGATACTAAGTAAAGAGGTGACGTCTACTACTGTAATTGGTGCCAAAATTCTCAAAGAAGTTGCAGACTCGAAAGTTATGGCAGACTCAAAGTACTACTCTGTTTGGCTGTGGCATTTGCTTGATAAACATCCACCTCTAAGCAAGCACATTGCGGAGGAAGAATGTCGAAACCCTTTCCTAACGGATCTCAAACGCTTTGGTAAATTGGATAGTCGAGAAAGAATCAAGGAAAACAGCTTTATTAAGGCCAAGAGTTGA

Protein sequence

MPPAPIYLYEKQKKNMGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKHIAEEECRNPFLTDLKRFGKLDSRERIKENSFIKAKS

Homology

[Close]

BLAST of IVF0026066 vs. ExPASy TrEMBL
Match: A0A5D3DQ60 (54S ribosomal protein L37 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00160 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.7e-66
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 16  MGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTST 75
           MGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTST
Sbjct: 1   MGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTST 60

Query: 76  TVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKHIAEEECRNPFLTDLKRFGKL 135
           TVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKHIAEEECRNPFLTDLKRFGKL
Sbjct: 61  TVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKHIAEEECRNPFLTDLKRFGKL 120

Query: 136 DSRERIKENSFIKAKS 152
           DSRERIKENSFIKAKS
Sbjct: 121 DSRERIKENSFIKAKS 136

[Close]

BLAST of IVF0026066 vs. ExPASy TrEMBL
Match: A0A1S4E228 (uncharacterized protein LOC103496726 OS=Cucumis melo OX=3656 GN=LOC103496726 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.7e-66
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 16  MGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTST 75
           MGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTST
Sbjct: 1   MGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTST 60

Query: 76  TVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKHIAEEECRNPFLTDLKRFGKL 135
           TVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKHIAEEECRNPFLTDLKRFGKL
Sbjct: 61  TVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKHIAEEECRNPFLTDLKRFGKL 120

Query: 136 DSRERIKENSFIKAKS 152
           DSRERIKENSFIKAKS
Sbjct: 121 DSRERIKENSFIKAKS 136

[Close]

BLAST of IVF0026066 vs. ExPASy TrEMBL
Match: A0A5D3CXE8 (39S ribosomal protein L54 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00130 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.8e-41
Identity = 99/139 (71.22%), Postives = 116/139 (83.45%), Query Frame = 0


Query: 12  QKKNMGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKE 71
           +KK MGL+QI  FRR+IIV+SK+LIQLTSVR+FAAGGKSKKGSKGGAAA+APKASILSKE
Sbjct: 24  KKKKMGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKE 83

Query: 72  VTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKHIAEEECRNPFLTDLKR 131
           V STTV+GA ILKE AD K+MADS+ Y  WLWHLLDKHPPLS+ +  +   +    DL+R
Sbjct: 84  VKSTTVVGANILKEGADPKIMADSE-YPAWLWHLLDKHPPLSE-LRRKNAESLPYADLRR 143

Query: 132 FGKLDSRERIKENSFIKAK 151
           F KLD+R RIKEN+ IKAK
Sbjct: 144 FVKLDTRARIKENNSIKAK 160

[Close]

BLAST of IVF0026066 vs. ExPASy TrEMBL
Match: A0A1S4DUD4 (39S ribosomal protein L54, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486119 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.8e-41
Identity = 99/139 (71.22%), Postives = 116/139 (83.45%), Query Frame = 0


Query: 12  QKKNMGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKE 71
           +KK MGL+QI  FRR+IIV+SK+LIQLTSVR+FAAGGKSKKGSKGGAAA+APKASILSKE
Sbjct: 24  KKKKMGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKE 83

Query: 72  VTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKHIAEEECRNPFLTDLKR 131
           V STTV+GA ILKE AD K+MADS+ Y  WLWHLLDKHPPLS+ +  +   +    DL+R
Sbjct: 84  VKSTTVVGANILKEGADPKIMADSE-YPAWLWHLLDKHPPLSE-LRRKNAESLPYADLRR 143

Query: 132 FGKLDSRERIKENSFIKAK 151
           F KLD+R RIKEN+ IKAK
Sbjct: 144 FVKLDTRARIKENNSIKAK 160

[Close]

BLAST of IVF0026066 vs. ExPASy TrEMBL
Match: A0A1S3B544 (54S ribosomal protein L37, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486119 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 2.6e-40
Identity = 97/135 (71.85%), Postives = 113/135 (83.70%), Query Frame = 0


Query: 16  MGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTST 75
           MGL+QI  FRR+IIV+SK+LIQLTSVR+FAAGGKSKKGSKGGAAA+APKASILSKEV ST
Sbjct: 1   MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST 60

Query: 76  TVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKHIAEEECRNPFLTDLKRFGKL 135
           TV+GA ILKE AD K+MADS+ Y  WLWHLLDKHPPLS+ +  +   +    DL+RF KL
Sbjct: 61  TVVGANILKEGADPKIMADSE-YPAWLWHLLDKHPPLSE-LRRKNAESLPYADLRRFVKL 120

Query: 136 DSRERIKENSFIKAK 151
           D+R RIKEN+ IKAK
Sbjct: 121 DTRARIKENNSIKAK 133

[Close]

BLAST of IVF0026066 vs. NCBI nr
Match: XP_016902030.1 (PREDICTED: uncharacterized protein LOC103496726 [Cucumis melo] >TYK25811.1 54S ribosomal protein L37 [Cucumis melo var. makuwa])

HSP 1 Score: 259 bits (661), Expect = 1.74e-86
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 16  MGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTST 75
           MGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTST
Sbjct: 1   MGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTST 60

Query: 76  TVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKHIAEEECRNPFLTDLKRFGKL 135
           TVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKHIAEEECRNPFLTDLKRFGKL
Sbjct: 61  TVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKHIAEEECRNPFLTDLKRFGKL 120

Query: 136 DSRERIKENSFIKAKS 151
           DSRERIKENSFIKAKS
Sbjct: 121 DSRERIKENSFIKAKS 136

[Close]

BLAST of IVF0026066 vs. NCBI nr
Match: XP_016899597.1 (PREDICTED: 39S ribosomal protein L54, mitochondrial isoform X1 [Cucumis melo] >KAA0041217.1 39S ribosomal protein L54 [Cucumis melo var. makuwa] >TYK16020.1 39S ribosomal protein L54 [Cucumis melo var. makuwa])

HSP 1 Score: 177 bits (449), Expect = 7.40e-54
Identity = 100/139 (71.94%), Postives = 116/139 (83.45%), Query Frame = 0


Query: 12  QKKNMGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKE 71
           +KK MGL+QI  FRR+IIV+SK+LIQLTSVR+FAAGGKSKKGSKGGAAA+APKASILSKE
Sbjct: 24  KKKKMGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKE 83

Query: 72  VTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKHIAEEECRNPFLTDLKR 131
           V STTV+GA ILKE AD K+MADS+Y   WLWHLLDKHPPLS+   +     P+  DL+R
Sbjct: 84  VKSTTVVGANILKEGADPKIMADSEY-PAWLWHLLDKHPPLSELRRKNAESLPY-ADLRR 143

Query: 132 FGKLDSRERIKENSFIKAK 150
           F KLD+R RIKEN+ IKAK
Sbjct: 144 FVKLDTRARIKENNSIKAK 160

[Close]

BLAST of IVF0026066 vs. NCBI nr
Match: XP_008442187.1 (PREDICTED: 54S ribosomal protein L37, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 173 bits (438), Expect = 1.48e-52
Identity = 98/135 (72.59%), Postives = 113/135 (83.70%), Query Frame = 0


Query: 16  MGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTST 75
           MGL+QI  FRR+IIV+SK+LIQLTSVR+FAAGGKSKKGSKGGAAA+APKASILSKEV ST
Sbjct: 1   MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST 60

Query: 76  TVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKHIAEEECRNPFLTDLKRFGKL 135
           TV+GA ILKE AD K+MADS+Y   WLWHLLDKHPPLS+   +     P+  DL+RF KL
Sbjct: 61  TVVGANILKEGADPKIMADSEY-PAWLWHLLDKHPPLSELRRKNAESLPY-ADLRRFVKL 120

Query: 136 DSRERIKENSFIKAK 150
           D+R RIKEN+ IKAK
Sbjct: 121 DTRARIKENNSIKAK 133

[Close]

BLAST of IVF0026066 vs. NCBI nr
Match: XP_004144674.3 (39S ribosomal protein L54, mitochondrial [Cucumis sativus])

HSP 1 Score: 169 bits (427), Expect = 6.53e-51
Identity = 97/133 (72.93%), Postives = 112/133 (84.21%), Query Frame = 0


Query: 18  LNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTSTTV 77
           ++QI LFRR+IIV+SKNLIQLTSVRTFAAGGKSKKGSKGGAAA+APKASILSKEV STTV
Sbjct: 1   MSQIRLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTV 60

Query: 78  IGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKHIAEEECRNPFLTDLKRFGKLDS 137
           +GA ILKE AD K+MADS+Y   WLW+LL+KHPPLS+   +     P+  DLKRF KLD+
Sbjct: 61  VGANILKEGADPKIMADSEY-PAWLWNLLNKHPPLSELRRKNAESLPY-ADLKRFIKLDT 120

Query: 138 RERIKENSFIKAK 150
           R RIKEN+ IKAK
Sbjct: 121 RARIKENNSIKAK 131

[Close]

BLAST of IVF0026066 vs. NCBI nr
Match: XP_038883606.1 (39S ribosomal protein L54, mitochondrial isoform X1 [Benincasa hispida])

HSP 1 Score: 169 bits (427), Expect = 8.96e-51
Identity = 99/138 (71.74%), Postives = 114/138 (82.61%), Query Frame = 0


Query: 14  KNMGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVT 73
           K M ++QI LFRRSI VNSK+LIQLTSVRTFAAGGKSKKGSKGGAAA+APKAS LSKEV 
Sbjct: 7   KKMVMSQIRLFRRSI-VNSKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASTLSKEVK 66

Query: 74  STTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKHIAEEECRNPFLTDLKRFG 133
           STTV+GA ILKE AD K+MADS+Y  VWLWHLLDKHPPLS+   +     P++ DLKRF 
Sbjct: 67  STTVVGANILKEGADPKIMADSEY-PVWLWHLLDKHPPLSELRRKNVETLPYV-DLKRFV 126

Query: 134 KLDSRERIKENSFIKAKS 151
           KLD+R +IKEN+  KAK+
Sbjct: 127 KLDTRAKIKENNSTKAKN 141

[Close]

BLAST of IVF0026066 vs. TAIR 10
Match: AT3G01740.1 (Mitochondrial ribosomal protein L37 )

HSP 1 Score: 108.2 bits (269), Expect = 5.8e-24
Identity = 69/135 (51.11%), Postives = 93/135 (68.89%), Query Frame = 0


Query: 18  LNQISLFRRSIIVNSKNLIQLTSVRTF-AAGGKSKKGSKGGAAANAPKASILSKEVTSTT 77
           +N+I L R S   +SK++++    RTF AA  K+KKG KGG A++APK S L+KE+ STT
Sbjct: 1   MNRIGLIRGS---SSKDVVR----RTFAAAASKAKKGGKGGGASDAPKGSSLTKEIKSTT 60

Query: 78  VIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKHIAEEECRNPFLTDLKRFGKLD 137
           V+GA  LK+ +D K++ DS Y   WLWHLLDK P LS+   +     P+  DLKRF KLD
Sbjct: 61  VVGANTLKDGSDPKILPDSDYPD-WLWHLLDKRPALSELRRKNVETLPY-DDLKRFVKLD 120

Query: 138 SRERIKENSFIKAKS 152
           +R +IKEN+ IKAK+
Sbjct: 121 TRGKIKENNSIKAKN 126

[Close]

BLAST of IVF0026066 vs. TAIR 10
Match: AT5G14290.1 (Mitochondrial ribosomal protein L37 )

HSP 1 Score: 92.4 bits (228), Expect = 3.3e-19
Identity = 62/135 (45.93%), Postives = 85/135 (62.96%), Query Frame = 0


Query: 18  LNQISLFRRSIIVNSKNLIQLTSVRTFA-AGGKSKKGSKGGAAANAPKASILSKEVTSTT 77
           +N I +F  S I  SK++++    RTFA A GK+KK  +G    +APKAS LSKE+ S+ 
Sbjct: 1   MNLIRMFGDS-ISRSKDVMRFVCQRTFATAAGKAKKVGRGDGGNDAPKASNLSKEIKSSM 60

Query: 78  VIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKHIAEEECRNPFLTDLKRFGKLD 137
           V+ A  LK+  D K++ +S +   +LWHLLDK P LS+ +  +        DLKRF KLD
Sbjct: 61  VVSANTLKDGLDPKILPNSDHPD-YLWHLLDKRPALSE-LRRKNVETLSFDDLKRFVKLD 120

Query: 138 SRERIKENSFIKAKS 152
           +R RIKEN  IKAK+
Sbjct: 121 TRARIKENHSIKAKN 132

The following BLAST results are available for this feature:

BLAST of IVF0026066 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0026066 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DQ60	4.7e-66	100.00	54S ribosomal protein L37 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S4E228	4.7e-66	100.00	uncharacterized protein LOC103496726 OS=Cucumis melo OX=3656 GN=LOC103496726 PE=...	[more]
A0A5D3CXE8	1.8e-41	71.22	39S ribosomal protein L54 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S4DUD4	1.8e-41	71.22	39S ribosomal protein L54, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=L...	[more]
A0A1S3B544	2.6e-40	71.85	54S ribosomal protein L37, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=L...	[more]

BLAST of IVF0026066 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902030.1	1.74e-86	100.00	PREDICTED: uncharacterized protein LOC103496726 [Cucumis melo] >TYK25811.1 54S r...	[more]
XP_016899597.1	7.40e-54	71.94	PREDICTED: 39S ribosomal protein L54, mitochondrial isoform X1 [Cucumis melo] >K...	[more]
XP_008442187.1	1.48e-52	72.59	PREDICTED: 54S ribosomal protein L37, mitochondrial isoform X2 [Cucumis melo]	[more]
XP_004144674.3	6.53e-51	72.93	39S ribosomal protein L54, mitochondrial [Cucumis sativus]	[more]
XP_038883606.1	8.96e-51	71.74	39S ribosomal protein L54, mitochondrial isoform X1 [Benincasa hispida]	[more]

BLAST of IVF0026066 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01740.1	5.8e-24	51.11	Mitochondrial ribosomal protein L37	[more]
AT5G14290.1	3.3e-19	45.93	Mitochondrial ribosomal protein L37	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013870	Ribosomal protein L37, mitochondrial	PFAM	PF08561	Ribosomal_L37	coord: 69..109 e-value: 2.1E-5 score: 25.1
IPR013870	Ribosomal protein L37, mitochondrial	PANTHER	PTHR28595	39S RIBOSOMAL PROTEIN L54, MITOCHONDRIAL	coord: 32..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0026066.1	IVF0026066.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome