IVF0026012 (gene) Melon (IVF77) v1

Overview
NameIVF0026012
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr04: 13122165 .. 13122350 (-)
RNA-Seq ExpressionIVF0026012
SyntenyIVF0026012
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGAATTCAACATCAAGAGATCAGAATTAGAAAGTCAAATAGTAGCAATCATGAGCTCAACATGGACTGTAGCTAGTATGATCATAGAGACATGGGCAGAATATGCAAAGAGAGAAGTTGAACATTATTATGAGGTGCGTCGAGAGAAATATGAGGTTGCTTCAAACAAAAACAACCCTTAG

mRNA sequence

ATGGATGAATTCAACATCAAGAGATCAGAATTAGAAAGTCAAATAGTAGCAATCATGAGCTCAACATGGACTGTAGCTAGTATGATCATAGAGACATGGGCAGAATATGCAAAGAGAGAAGTTGAACATTATTATGAGGTGCGTCGAGAGAAATATGAGGTTGCTTCAAACAAAAACAACCCTTAG

Coding sequence (CDS)

ATGGATGAATTCAACATCAAGAGATCAGAATTAGAAAGTCAAATAGTAGCAATCATGAGCTCAACATGGACTGTAGCTAGTATGATCATAGAGACATGGGCAGAATATGCAAAGAGAGAAGTTGAACATTATTATGAGGTGCGTCGAGAGAAATATGAGGTTGCTTCAAACAAAAACAACCCTTAG

Protein sequence

MDEFNIKRSELESQIVAIMSSTWTVASMIIETWAEYAKREVEHYYEVRREKYEVASNKNNP
Homology
BLAST of IVF0026012 vs. ExPASy TrEMBL
Match: A0A5D3DFG8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold482G00720 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.5e-07
Identity = 31/37 (83.78%), Postives = 34/37 (91.89%), Query Frame = 0

Query: 24 TVASMIIETWAEYAKREVEHYYEVRREKYEVASNKNN 61
          TVASMII TWAE AKR+VEHYY+ RREKYEVASN+NN
Sbjct: 2  TVASMIIGTWAECAKRKVEHYYKARREKYEVASNRNN 38

BLAST of IVF0026012 vs. ExPASy TrEMBL
Match: A0A5A7SR74 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold269G00040 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.5e-07
Identity = 31/37 (83.78%), Postives = 34/37 (91.89%), Query Frame = 0

Query: 24 TVASMIIETWAEYAKREVEHYYEVRREKYEVASNKNN 61
          TVASMII TWAE AKR+VEHYY+ RREKYEVASN+NN
Sbjct: 2  TVASMIIGTWAECAKRKVEHYYKARREKYEVASNRNN 38

BLAST of IVF0026012 vs. ExPASy TrEMBL
Match: A0A5A7TWH6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001050 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 7.6e-07
Identity = 31/37 (83.78%), Postives = 33/37 (89.19%), Query Frame = 0

Query: 24 TVASMIIETWAEYAKREVEHYYEVRREKYEVASNKNN 61
          TVASMIIETWA  AKREVEHYYE RR K+EVASN+NN
Sbjct: 51 TVASMIIETWARCAKREVEHYYEHRRRKFEVASNRNN 87

BLAST of IVF0026012 vs. ExPASy TrEMBL
Match: A0A0A0M0F2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G502890 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.7e-04
Identity = 25/35 (71.43%), Postives = 30/35 (85.71%), Query Frame = 0

Query: 27 SMIIETWAEYAKREVEHYYEVRREKYEVASNKNNP 62
          SM+I TWAE A+R++EHYYEV R KYEVASN+N P
Sbjct: 3  SMVIGTWAECARRKIEHYYEVCRGKYEVASNRNGP 37

BLAST of IVF0026012 vs. NCBI nr
Match: KAA0045599.1 (hypothetical protein E6C27_scaffold243G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 62.0 bits (149), Expect = 1.76e-10
Identity = 31/37 (83.78%), Postives = 33/37 (89.19%), Query Frame = 0

Query: 24 TVASMIIETWAEYAKREVEHYYEVRREKYEVASNKNN 60
          TVASMIIETWA  AKREVEHYYE RR K+EVASN+NN
Sbjct: 51 TVASMIIETWARCAKREVEHYYEHRRRKFEVASNRNN 87

BLAST of IVF0026012 vs. NCBI nr
Match: TYK22029.1 (uncharacterized protein E5676_scaffold482G00720 [Cucumis melo var. makuwa])

HSP 1 Score: 62.8 bits (151), Expect = 3.45e-10
Identity = 31/37 (83.78%), Postives = 34/37 (91.89%), Query Frame = 0

Query: 24 TVASMIIETWAEYAKREVEHYYEVRREKYEVASNKNN 60
          TVASMII TWAE AKR+VEHYY+ RREKYEVASN+NN
Sbjct: 2  TVASMIIGTWAECAKRKVEHYYKARREKYEVASNRNN 38

BLAST of IVF0026012 vs. NCBI nr
Match: KAA0032933.1 (uncharacterized protein E6C27_scaffold269G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 62.8 bits (151), Expect = 3.69e-10
Identity = 31/37 (83.78%), Postives = 34/37 (91.89%), Query Frame = 0

Query: 24 TVASMIIETWAEYAKREVEHYYEVRREKYEVASNKNN 60
          TVASMII TWAE AKR+VEHYY+ RREKYEVASN+NN
Sbjct: 2  TVASMIIGTWAECAKRKVEHYYKARREKYEVASNRNN 38

BLAST of IVF0026012 vs. NCBI nr
Match: KGN65701.1 (hypothetical protein Csa_019881 [Cucumis sativus])

HSP 1 Score: 53.5 bits (127), Expect = 3.17e-07
Identity = 25/35 (71.43%), Postives = 30/35 (85.71%), Query Frame = 0

Query: 27 SMIIETWAEYAKREVEHYYEVRREKYEVASNKNNP 61
          SM+I TWAE A+R++EHYYEV R KYEVASN+N P
Sbjct: 3  SMVIGTWAECARRKIEHYYEVCRGKYEVASNRNGP 37

BLAST of IVF0026012 vs. NCBI nr
Match: KAA0037849.1 (uncharacterized protein E6C27_scaffold113G00420 [Cucumis melo var. makuwa])

HSP 1 Score: 51.2 bits (121), Expect = 2.71e-06
Identity = 24/30 (80.00%), Postives = 27/30 (90.00%), Query Frame = 0

Query: 32 TWAEYAKREVEHYYEVRREKYEVASNKNNP 61
          TW E AKREVEHYYE+ R+K+EVASNKNNP
Sbjct: 50 TWVECAKREVEHYYELCRKKHEVASNKNNP 79

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DFG84.5e-0783.78Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7SR744.5e-0783.78Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TWH67.6e-0783.78Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0M0F22.7e-0471.43Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G502890 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAA0045599.11.76e-1083.78hypothetical protein E6C27_scaffold243G001050 [Cucumis melo var. makuwa][more]
TYK22029.13.45e-1083.78uncharacterized protein E5676_scaffold482G00720 [Cucumis melo var. makuwa][more]
KAA0032933.13.69e-1083.78uncharacterized protein E6C27_scaffold269G00040 [Cucumis melo var. makuwa][more]
KGN65701.13.17e-0771.43hypothetical protein Csa_019881 [Cucumis sativus][more]
KAA0037849.12.71e-0680.00uncharacterized protein E6C27_scaffold113G00420 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0026012.1IVF0026012.1mRNA