
IVF0025996 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTTTAGGATGTGTCCAATGGCAGCAAGTAATCGAGAATTCACTGTTGACGACAACGACGACGACGACGTAAATGCCGTTCGCGTCCTTCCTCTTTCTTGTTAACTTACCTCATATGTCTGAGTCCTTTGACCTCTCTCCCATCCCATTTTCAGGACTTCGACTGGGAAGCAGCCGTCAAAGAAATTGACGTGGCCTGCCTATCAGGAATTCACTCTGCTTCATCACATTCACTTCATCCTTCCCTAACGGAATCCTCCGACGCCACTGCAGAAACTCCAGCTTCATTTCCACTTTCCGAGGAGAATGAAAAACGCGGGACTTCTCGCCAGTCTACACTTCACAGATTTATCATGAATGCAAAGTTTCAAAAGAAAACAATGGACGTCGAAAAACCGGTTCAAGATCCCGGCCTTGTTGAAGACTCGGTTGGTCTTGTTGACATAGATGAGGAGGCAGCAAAGACCTGGATATATCCAGGTCGTCTTTGAACTCCGGACTAATTTTGATTTCCATCATTTTGGGATTGTTATCCACGGACTCATTTTGTTCTATTCTCACCATGATTTTCTGTGAAACGTACTCCTCACTTACCCCAAGCAACTAGAACATGTAAAATACAAAAGATAACCTAAATTTGTCAACTGATTGTTTAGATCAACTACAAGCTTCTTCAGGTGGCATATGTTTTACTGCAAGAGTTGTAGTCCTATTTTGGAATGCAACGAGTCCAATTTACTTCCTCAAACCATATAGTTTTTGATAGCCTTTCTTTTGTTTCAACTCTAAGTTTGTTTAATATGCCAACATATTCCTTAGAATTTCTTGAGTTCACTGTTTGATATGTAGGCTATAAATTTCATGAAGTCAGTAGATAAGGAGATTTATTGCGTATATACAGTATTTTGCATCATTGACTGCTTGATGAATTATTTCTTTTCTTAGAAGTTAGGTGTTAATAGAATTATAATCTGATGTGATGTCAGTTAAATCATGTAGTTAATGTTCCTCTTCGGGATTATCAGCTGGCTATTACAAAGACAGCACTATTTTCAAATACGTTGGTGGCTTTGCCTACAGGACTTGGAAAGACTCTTATTGCTGCAGTTGTTATGTATAACTACTTCAGATGGTTTCCTGAGGGTAAGGGAAAACTTTTGCTATCTTGCTGA ATGGCGTTTAGGATGTGTCCAATGGCAGCAAGTAATCGAGAATTCACTGTTGACGACAACGACGACGACGACGACTTCGACTGGGAAGCAGCCGTCAAAGAAATTGACGTGGCCTGCCTATCAGGAATTCACTCTGCTTCATCACATTCACTTCATCCTTCCCTAACGGAATCCTCCGACGCCACTGCAGAAACTCCAGCTTCATTTCCACTTTCCGAGGAGAATGAAAAACGCGGGACTTCTCGCCAGTCTACACTTCACAGATTTATCATGAATGCAAAGTTTCAAAAGAAAACAATGGACGTCGAAAAACCGGTTCAAGATCCCGGCCTTGTTGAAGACTCGGTTGGTCTTGTTGACATAGATGAGGAGGCAGCAAAGACCTGGATATATCCAGTTAATGTTCCTCTTCGGGATTATCAGCTGGCTATTACAAAGACAGCACTATTTTCAAATACGTTGGTGGCTTTGCCTACAGGACTTGGAAAGACTCTTATTGCTGCAGTTGTTATGTATAACTACTTCAGATGGTTTCCTGAGGGTAAGGGAAAACTTTTGCTATCTTGCTGA ATGGCGTTTAGGATGTGTCCAATGGCAGCAAGTAATCGAGAATTCACTGTTGACGACAACGACGACGACGACGACTTCGACTGGGAAGCAGCCGTCAAAGAAATTGACGTGGCCTGCCTATCAGGAATTCACTCTGCTTCATCACATTCACTTCATCCTTCCCTAACGGAATCCTCCGACGCCACTGCAGAAACTCCAGCTTCATTTCCACTTTCCGAGGAGAATGAAAAACGCGGGACTTCTCGCCAGTCTACACTTCACAGATTTATCATGAATGCAAAGTTTCAAAAGAAAACAATGGACGTCGAAAAACCGGTTCAAGATCCCGGCCTTGTTGAAGACTCGGTTGGTCTTGTTGACATAGATGAGGAGGCAGCAAAGACCTGGATATATCCAGTTAATGTTCCTCTTCGGGATTATCAGCTGGCTATTACAAAGACAGCACTATTTTCAAATACGTTGGTGGCTTTGCCTACAGGACTTGGAAAGACTCTTATTGCTGCAGTTGTTATGTATAACTACTTCAGATGGTTTCCTGAGGGTAAGGGAAAACTTTTGCTATCTTGCTGA MAFRMCPMAASNREFTVDDNDDDDDFDWEAAVKEIDVACLSGIHSASSHSLHPSLTESSDATAETPASFPLSEENEKRGTSRQSTLHRFIMNAKFQKKTMDVEKPVQDPGLVEDSVGLVDIDEEAAKTWIYPVNVPLRDYQLAITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPEGKGKLLLSC Homology
BLAST of IVF0025996 vs. ExPASy Swiss-Prot
Match: I3XHK1 (DEAD-box ATP-dependent RNA helicase FANCM OS=Arabidopsis thaliana OX=3702 GN=FANCM PE=2 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 8.5e-38 Identity = 96/170 (56.47%), Postives = 117/170 (68.82%), Query Frame = 0
BLAST of IVF0025996 vs. ExPASy Swiss-Prot
Match: Q8BGE5 (Fanconi anemia group M protein homolog OS=Mus musculus OX=10090 GN=Fancm PE=1 SV=3) HSP 1 Score: 95.9 bits (237), Expect = 5.2e-19 Identity = 42/58 (72.41%), Postives = 48/58 (82.76%), Query Frame = 0
BLAST of IVF0025996 vs. ExPASy Swiss-Prot
Match: Q8IYD8 (Fanconi anemia group M protein OS=Homo sapiens OX=9606 GN=FANCM PE=1 SV=2) HSP 1 Score: 95.5 bits (236), Expect = 6.8e-19 Identity = 42/58 (72.41%), Postives = 47/58 (81.03%), Query Frame = 0
BLAST of IVF0025996 vs. ExPASy Swiss-Prot
Match: Q9UT23 (ATP-dependent DNA helicase fml1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=fml1 PE=1 SV=2) HSP 1 Score: 92.8 bits (229), Expect = 4.4e-18 Identity = 41/61 (67.21%), Postives = 48/61 (78.69%), Query Frame = 0
BLAST of IVF0025996 vs. ExPASy Swiss-Prot
Match: Q7SDF3 (ATP-dependent DNA helicase mph1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=mph1 PE=3 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 3.2e-16 Identity = 51/126 (40.48%), Postives = 67/126 (53.17%), Query Frame = 0
BLAST of IVF0025996 vs. ExPASy TrEMBL
Match: A0A5D3C5Y0 (Fanconi anemia group M protein isoform X6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G00300 PE=4 SV=1) HSP 1 Score: 364.0 bits (933), Expect = 3.8e-97 Identity = 185/188 (98.40%), Postives = 185/188 (98.40%), Query Frame = 0
BLAST of IVF0025996 vs. ExPASy TrEMBL
Match: A0A1S3B3H7 (Fanconi anemia group M protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485372 PE=3 SV=1) HSP 1 Score: 363.2 bits (931), Expect = 6.5e-97 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of IVF0025996 vs. ExPASy TrEMBL
Match: A0A1S4DTZ2 (Fanconi anemia group M protein isoform X5 OS=Cucumis melo OX=3656 GN=LOC103485372 PE=3 SV=1) HSP 1 Score: 363.2 bits (931), Expect = 6.5e-97 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of IVF0025996 vs. ExPASy TrEMBL
Match: A0A1S4DUR1 (Fanconi anemia group M protein isoform X3 OS=Cucumis melo OX=3656 GN=LOC103485372 PE=3 SV=1) HSP 1 Score: 363.2 bits (931), Expect = 6.5e-97 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of IVF0025996 vs. ExPASy TrEMBL
Match: A0A1S3B2A7 (Fanconi anemia group M protein isoform X4 OS=Cucumis melo OX=3656 GN=LOC103485372 PE=3 SV=1) HSP 1 Score: 363.2 bits (931), Expect = 6.5e-97 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of IVF0025996 vs. NCBI nr
Match: TYK06568.1 (Fanconi anemia group M protein isoform X6 [Cucumis melo var. makuwa]) HSP 1 Score: 365 bits (938), Expect = 2.85e-127 Identity = 185/188 (98.40%), Postives = 185/188 (98.40%), Query Frame = 0
BLAST of IVF0025996 vs. NCBI nr
Match: XP_008441148.1 (PREDICTED: Fanconi anemia group M protein isoform X6 [Cucumis melo]) HSP 1 Score: 363 bits (933), Expect = 2.96e-115 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of IVF0025996 vs. NCBI nr
Match: XP_016899456.1 (PREDICTED: Fanconi anemia group M protein isoform X5 [Cucumis melo]) HSP 1 Score: 363 bits (933), Expect = 3.46e-115 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of IVF0025996 vs. NCBI nr
Match: XP_008441147.1 (PREDICTED: Fanconi anemia group M protein isoform X4 [Cucumis melo]) HSP 1 Score: 363 bits (933), Expect = 3.46e-115 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of IVF0025996 vs. NCBI nr
Match: XP_016899455.1 (PREDICTED: Fanconi anemia group M protein isoform X3 [Cucumis melo]) HSP 1 Score: 363 bits (933), Expect = 3.62e-115 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of IVF0025996 vs. TAIR 10
Match: AT1G35530.1 (DEAD/DEAH box RNA helicase family protein ) HSP 1 Score: 157.1 bits (396), Expect = 1.4e-38 Identity = 94/168 (55.95%), Postives = 115/168 (68.45%), Query Frame = 0
BLAST of IVF0025996 vs. TAIR 10
Match: AT1G35530.2 (DEAD/DEAH box RNA helicase family protein ) HSP 1 Score: 157.1 bits (396), Expect = 1.4e-38 Identity = 94/168 (55.95%), Postives = 115/168 (68.45%), Query Frame = 0
BLAST of IVF0025996 vs. TAIR 10
Match: AT1G36020.1 (BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein (TAIR:AT1G35530.1); Has 18 Blast hits to 18 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.8 bits (138), Expect = 1.1e-08 Identity = 42/115 (36.52%), Postives = 60/115 (52.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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