IVF0025937 (gene) Melon (IVF77) v1

Overview


Name	IVF0025937
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	protein PALE CRESS, chloroplastic
Location	chr05: 3379968 .. 3391350 (-)
RNA-Seq Expression	IVF0025937
Synteny	IVF0025937

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATATTTAAAAGTTAAATGGATTAAAAATTAAGTACATATAACATTGAACCTCTCAAATTTAAAATTTGAATACGTCAATTAGCAACTATTTGTACTCGGGGACAAAAGGTAAAATAAAAAGTTGAATATGTTTAGTTATGTTTTCTTATGAACATATTATACAACTTGGATGGACTTGATGCATCTATGATTAAATAAATTACATGAAGTTGTGGCATTTTGGAGAATGTGATGAAAGAATTTGTGTAATTTTAATTTTTAGGGATAATATCTCAAAGAAGTTTTAGAGGGATAATGATATTTTCTTCTTGCCTTTGTGTTGTTGGCTTTGATGGGGCGTTATTTTCCAGCTTCCTTTCTTTGTTTGGGAAACTAGAAAATGGAGGCACAGGTACTTTGCCTGAGGTTCTCATCACTTCCACAATTGCTCTCCACTACCCCAATCTTATCAAAGCTTTGGACATCTCGTTCCTCCAAGCACTATTCATCTGGTCTTGGTTAGCCCTCTTTCAGCTTCCTCAATCACTCTTTTTCACCTGCAAATTTTCATCCTAACTTTTCATTTTGGTGACCGTTTGATGCCTAGTTTTACGGAGGAGCTTCAGCAAAGAAGAGCCGCTTATTGATGGGCTCCCTAAAGAGTATTACGATGATGTATGTGTTTACCTAATTTGGTTTTTTTTTTTTTTTTTTTGGCTTGATTCAGCTTCTGCTTCTTCCGCTATAGCTTCTTGTTTACAATTGTGTGTGTTATCTGGTATTTTCTATTTTCTGGTACTGGGGCAGGGCAAAAGCATGAAGACTTACAGAGATGAAAATGATGAATTTTCCTTCTGACGCATACTTGTTGTCAATACCCGGTTGAAGCTGAATCATTTTCGAACATATATAAAAAGACAATTGCTATACTTGGCGATTTTTGGGGAGATTTCCTGTTCTACCAATTTTTTTTTTTTTTTTTTTTTTGTTAAAATGCTTCTCCTCACGTTTGTGACCATGAGAACGATGAAGAGCAATGGAGCAGGGGCGAATGAGAGGGAGAGACAGTACAACGGATTTATAGGGAAATGAGTTGAAAGGTTATTTTACAAAGCTGACAGATGCAAATTATGTTTGATTTCATTAATTTATTTTTGAGGGAGGGTGGGTAGATTTCATCGAAGTAGTCAAAACCGTGTGATAGTCATTTGAGGGAATCAATACGTTTCTCTATGTTAACTGACCATTAGAAAGGAAATATGTTGGTCAAAGAATTGTGGTTTGAATTTTGGTTAAAAGGAAGCGATTATTATGTACCTTTCTAATCGTTTCACAATATTATCTGGCAGAAATTTTTAGGCAAACAGTAATAGAAAAGGATAATATGTGCTGCCCTGGATGACGAAGAAGAAAAGGTATCTTTTTCGACTGAGAAATGGATAACTTGGACATCCTTACTTTGTTGCTGGAAAATGTTAGGCTGGGTCAAATAGTGACGTTTTTCTATTGTGGAAGTTCTAAAACTCTGCCTTTTTTCAGTCATAATCAGCCTCTTTAGCCCTCCACGAAGAGAGAAGAATTGGACAGCTGCTTTAGTAGCACAAGTATCATTGATAAAGTTCAAAGAGGTCATGCTTATTCAACTGACCCCCCTTACTAGTGTCGTGCAATAGTAACGAAGAATCTCTTCCACCTTTTCATTCACTGCAGTTTTATCTCATGTTTTTCTGTGGGAACTTAGAATAAAAGCTTTGGGCCATACAAAGTGCTTGATTAAAAATAATTAAACATAATTTTGTATCGCCATTTAAACTTTGCAAAGCTTTTTGTAGTTTACGTACTCTGGCTAATTAGAAGGTTTTCTTGTAGCCTCATTTAGCTGGGTTGGGTTTCCTCCCCTTCTTTCGTTAATGAAATATCATGTTTGTGTTGTTTTTTTGTTTTGTTTTGTTCTGTTTTGTTTTTTAAAATTAAACTATAAAGAAAAAAGGTTAAAAATCAGATATTAACCTGTTCTACGTTAGGAATGGCAAGCTCGGCAAAGAGAGAAGACGAAGGAGTTACATCGAAGGCGTCAAGAGGAAGATGAAGAAGAGGACAGAAAGGTACAAGAATATCATGAAATTGGAATGCGTCTGAAAGAATTTCCAGAAGAAGATGTCAGAAAAGCTCGAAAACTGGTTTCAAGCTTTATTAGAGCTGCTGAAGAAGTTGAAGAGGTAATCAATGGTTAGGAGTAGATTTCATGCTGTTTTAATCATTAACTTGATCTTTCAAAAAACAAGGCGCTATCTTTAATCCAACATAAGGTTTTCTTGTTCTTTCTTATGGGCAATCTTCTATGGAATGCCCTAAAAGATGGTCATCCAAAAAATACAAACCATGATTTTCTCTGTTATACTATTATTATTATTATTTTTGTAAGAAACTAGAATATGCATTCTGCAACAAAACAAAGAAGACTGCCTAAGGGATAGGGGATGAGATAGTCCCCACCCAATAAAAACTACTTATAAACTACCTTCCAGTCAAAAAAGTCATTGGTGAAGGCGAATTACAAAAGATTTTTCTATAGCTATGGCACCACCAAGAAGCATTAAGCTGTGCAAAATCTAAAATACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAGACGTGGACTTATCTTCAAAGGTTCTTCCCTTTTCTTTCAACCAAAAACACCACGAAAGAGCTCTCGAGGCAAACTTCAATAATGTTCCAGCCTTGTTCTTAAAATTCCATCCTCTCTAGGAATGAAATTACCTAGGGTTGATTCCTTATTAATAAAATCTATTTGGAGCTCCTCTTTCATTGGTTAGACAGTGCGATTGATTATGTTAAATAGTAGAAAAGAGAACACAAGAGTTACATGGAAAATCCTAGAACAGGGAGAAAAACTACGATAGAAAGTCGCTTTTATTATTTTCACACCTGATGAAAGTTACAAGATAAAAGACAATTTTATAGGCTCTAGCAAGCCTTAATTAAAAAAAAAAAGGAAATATTCTCTTGTATATAGAGTTCTTATATTAATAAAGAAGTTTGTCTCCGTTTAAAAAAAAATAAAAAAAGGGAAATAAACTTAGAGTAAAATAAAATACTAGAATACCCTCAGAGGTTATAAACTATGAATAAAGTCCTTTATTTTCAACACTCTCTCTCAAGCTGGGGCGTAGATGTCAATCAGGCTTAACTTGCTAGTACATGAGTCAAAACTTGGCTTGAGTAACCCTTTGGTGAGAACATCATCAACTTGTTGACAAGATGGTATGGAATACAGATACTGCTGTTGTCTAGTTTAACTTTGCTGCAAAGGAGAAAGTCTCAGAATGATCTATCCTATCAGTTTAAGTAAACCCTTTTACTACAAATCTAGCCTTGTACCTGTCTAAAGTTCCATCTGGTTTATACTATAGAGTGAACACCCACTTGCACTCAACTATTTTATGCCCTTTAGGAAAAACACAAACATCCAACGTATTATTTTTTTCAAGAGCTCATGTTTCTTCCATGACGATTGTCTTCCATCCAGGAAATTCCATAGCCATATGTATGCTTGAACTCACAAGTTAGTATTATCGAGGCCTGTAGTACCGTGAGCTTCTGTTGGCTCAGATCCATGGATTGCAACCGACAAAGTAGGAGGGGACACCATTTATATTTTGAGATTCTTCCTCTAGTAAGTGTTAGTGATATATAATTAAATAAAATTTACCTTCGACCAATAGCTTAAGCTCTTGGGTGAATTGGTGGTTTAATATGGTATTAGAGCAGGTGGTCTAGGAAGGTCTCGTGTTCAAGCCCCTATGTTGCTGTTTCTATCCCAATTAAAATTGATTTCCACTTGTTGGGCTTTAAATAAAATTGATTTCCCTATATTTCAAGCCCACAAGTGAGGGGGAGTGTTAGTGATATATAATTAAATTTACCTTTAACCACTAGCTTAAGTTTTTAGTTCTCCTTTTGGTCATGAACAAATCATGTTTGGCATCCTAAATTAGGACATCCCAACTTTCATTATCTTAAACATTTGTTCCCAAATTTGTTAAAAAATATGGATTATTCTTCTCTTTAATGTGAAAGTCGCATTTTTGCAAAATGTCATCGATCCACCTATTTTCCAAAACCATACAAAAGCCTGCCAATCGTTTTATCTCATTCGCGGTGATGTTTGGGGTCTTTCTAAAATTTTGACTCAATGGAAAAAAGTGGTTTGTTACCTTTATTGATGATCACATACGTCTATCTTGGGTCTATTTAATGACAAATAAATCTGAGGTGAAAGATCTTTTTAAAATTTTTATGATATGATTGAAACTCAATTTCAAACCAAAATCAGCATTTTAGACTTCGATAATGGAACAGAGTATTTCCCTATTTGAGTGATTTTTTAAAAGAAAAAGGCATTTTACATCAGTCGACTTGTCGTGATACTCCAAACAAAATGGAATTGTTGAATGGAAAAATAGATATTTACTTGAGGTTGCACGTGCCATAATGTTTTCTATGCATGTTCTTGAGTATTTATGGGGGGAAGGTGCACTCATGACTAGCAAAGTCTTAAAATTTAGAACCCCTCTTGAATGTCTTAGAACTAGTTTTTCAACTTGTCGCATATACTCCGACTTACACTTAAAGGTTTTGGTTGCACTGCATATGTTCACATACCTACTCTTTTTCGATCAAACTTGATCATAGAGCTACAAAGTGCATTTTTTGGGTTATGCCTCAAATAAAAAAGGGTACAAATGTTTTGATCCTGCGTAAAAAAATTCATGTGAGTATTGATGTGTAGGATAGATAACTATTGAAGTTTTCCTCGAGAGCTCTTTCTATTAGTCATCTTGACATGTTCGTCCCAAGTCCTTCAAAGTCAACTATAGAAATTTCTCATTTAGGGGAAGAAATACTACAAATGGCCCTACAGGTCAAATTCTTGAGTTAAAGTTTTATACTAGAAGAGCAGACAATCAAAGGAACCAAGACAAGAGAGTTGATTTTACACAAAACCAATTTGAAACCCTGATAAATGATGCTGTAAGTCCTCCCTAAGTTCTCAATGATGAAAGTTGGTAATCCTTCTTCTCCTTTTATTCCCAGTATTTCGAATGTTCAAAATACCTCACCTATTATCTCTAATCTTGAAGTTCCTATTGCTATTATAATAGAGACTAGAACATGTATTGAATATTCCATTGCAAATTACATCTCATATGCAAAATTGTCAAATAGTCAGAAGCCTTCACATCTAGGATAGATAGCTTATTTGTTCCTAGGAATACACAGGAAGCTGTAGATGATCCGAATTGGAAACTAGCAGTTATGGAAGAAATGGATCCTCTACGACAAAGTGAAACTTGGGAAGTAACAAACTTACTAAAAGATACGATGACTGTGAGGTGCAAATAGGTGTTTACAATAAAGTGTAATGCTGACAATGGTATTGAAAGATACAAGGTCAGACTAGTAACTAAAGGCTTCACTCAAACCTATGGAGTCGATCATCAGGAGACTTTTGCTTCGGTTGCAAAAGACCAACTCAATTAGAGTCCTGCTTTTGTTTCCTGTGGCTAATTTAGATTGACCTCTTCATCAATTAGACGTTAAGAATGCTTGTCTCAATGGTGATTTAGAAGTAGAAGTGTTTATGTGTTTACCGCAAGGATTTGAAATGGAATTGGAAAATAACAAAGCTTGCAGATTAAAGAAATCATTATATGGTTTGAACGCTTTGGAAAGACAATCACCAGCAAAGTCAAGCAGATCATACAATCTTTTACAAACATTATGAGAATAATAAAACTACTATTTTACTTGTCTATGTTGATGACATTATTCTTACAGGAAATGATGAAGAAGGTGTGGTTGATTTTTAAGAACAAGCTTGCAAGTGAGTTTCAAATTGAAGACTTGGGGGCCTTAAAATATTTTTTAAAGATAGAGTTTGCAAGGTCTAAGAAAGAGATTTTTTTAATCAGGGGAAATATGTTATCGACTTGCTTCAAGTTACTGGCTTACTTGGCTGTCGAACAACAAAAACCCCTATTAAACCAAATATGAAATTACTAGATGTAAACCTTGAGGAAGTCAAGGACAAAGTTGGATACCAAAGTCTTGTAGGTAGATTGATCTATTTATCTCACACACGTCCAGATATAGCTTTTGTTGTAAGTATGGTGAGTCAAGTTATGCACTATAGAATCTTGAGATACTTGAAGGGAACATCAGGTAAAGGTATATTGTTTAAAAAACATGATCACTTTCAAGTTGAAGTGTACACTGATGTTGATTGGGTTGGAATTACTATTGATAGAAGATCTACTTCTAGTTATTGTTCATTTGTTGGAGAAAATTTAGTTACATGGCACGGTAAAAAGCAAAATGTAGTAGTTAGGAGCAGTGCTAAAGCAAAATTTAGCGCCTTAGTCCATAGAATTTGTGAAGGCATATGGATTAATAGTCCATAGAATTTGTGAAGGCATATGGATTAACAGGATCTTTGAAGAACCGAAAGTATCTCCAAAGACATTTATACGAGTTTATTGTGATAATAAGACTGCCATTGTTAGTTCATAATTCTGTTCTACATGATAGGACGAAGCACATTGAAATTGACAAGCATTTCATAAAGGAGAAGGTTGATGCAAGTGTAATATGCATATCTTATCTTCCTAACAAACAGTGGATATGCTAACTAAAGGTCTTTCGAAAAAACAATTTGATAAATGTCTTAGCAAGTTGCCTATGGATGATATCTACAAACTAGCTTGAGGGGGAATGTTGAATTTCCTTTTCTCTTGTATTACTACATTTTTATTTATGTTCATATTTTTTTCTTATTTGTTGTTGCTCTTTCTCTATATAAGAAGATCTTGTATTTGGTTCAATAATATAGAGGAATAATATTACATCACTTTTACTTCCTTTTTTAAAGTGTAAGTTATCCAAGGGCCTTCTCCAGTGGGTAGAACGGTGTCATGGGCACTCATGATGGGTTCAGGAAGGTTTGTGGTGTCATGGGCACTCAAGAAGGGTTTAGGACGGTCAGTAGGGACCGAAGATGTGGACCAGTTAATCTATTCACTTGTACTCTCCCCTGAAGATGACTAATGGGGAAGAAAGGTTGATCCTCAAGAAACGTTACATCCATGGAGATCAAGTATTTTTGGGAAGATGGATGGAAACATTTATAACCTCACTGGTGAAGGGAATACCCAACGAAAAACATTTATGAGCACGAGCAGTAAACTTAGTTTGATTAGGGCCATGACTATGGACAAAGACAGTGCACCAAAAATCTAGAGAGGGGACATCAAGAATGATCTGCGTGGTAGGGTATGAGTCTATGACTCCTTGAGGCATTTAAGAGGGGTTTGGAGTTGGAGGACATGGGAAGACATTCAATTAATAAGATGAGCTGCAGTGAGAACTACAACACTGTAAGCTTATGAGGCTTCTTTTGGGGGATAAAAGTACCTAATTTTTCCATGTAATAGTTGCTGCCCATCACCGCAAAACTCGATAATTGAAGTCCTCTCCAAGAACCATGTAGCCTATTTACAGCTTAGGAAATTAAGCTTAAATTTATAGTATTCTATTCAACATTGTTCACTAAGCATCAGAAGCAACTTTCATCCTACCAACCCGAAGTGGAGTCCTATCGGTTTTAGGGTTGAATGAGATGCATATAAATGTCTTATAGCAAAGAGAGTTGACTATAAATCTGTCTCGGACTATTGGCTGATTAGACTTATTCCTTGTGACTATAAGCTTGTTACTTGTGTTCTTTTGAAATGATGGATATTGAGGGTCATTTACACTTCTTCTTCTTGGGTATGGTTAGAGACTACAGTGTTCTACTCATGGGTGGCTCATGGTGAATTTTCTTTGAATTTTTCCAATTTCATATCCTTTTTCACATAAAGTTCTGACAATCAGATTATTGCAAAAGTGGCTTAGCAACTTACTGACACTATAGTTGTTCCATCAATTTGAATGCAGAAAATTGAGGAAGCTGCCGAGAAAGGGGAACTAACAGAGCTTGTTCTGTTAGTTATATGGAATCGGCTTGATTTAGCACGTTGTGATGTATGTTTTTTTCAAATTCCTTTAATTTTAATTTACTTGTTTATTTTGGAGGGAGCCGAGTTCAATGTGCTTACTTATAACTGGCTCTTTCTTCAGGATGAAAAGGATGCAGTTAGAAGTCTTGATCTGCTATATCGAAGGGTGGAGGTATGAACATTTTTTACACTGTTTTGAACATGCCATGTTTGTTATGATCTTAAAGAACACTCATTGAAATCCTCCTTCGTCATGCTCAGTACATGGAAGTTATACGATCTGAATCAAACAAGAGAAGTCGAAACTGAAACATTCTCAGTTTCTGACCACTAATAAACCAAGGAAGTGATCCTCCAAAATGTCCAACCAAACTGAAGAAATCTTCCAAAATGTCCAACCAAACAGAGGGAGGAGACTAATCTTGCAAGCCTTGAAGAGGTCTTCTAAAAAAACAAAAACTCTGCTAGGTTTTCTATAACCGCAAGAGACCAAAACATTTGAGGATAGGCTTCTAAAATGTCCAACCAAACTGGAAACTGATGATCTCAATCGAGCTATCATACACTGAAAGTGAAAAGGTGAAGAAGGTCTTCAAAATACCCATGCAAAGCAATCTCAATGAAGGAGACAAGCATAGAGATGAAAGCTTCCTATGCAAAGTGTAAAAGCAAAACTTGTAGGTTTCAAGAGAGGATTCAACGGTAACATTTCTAAAAAATTAAAGAACAAAACGACTTAAAATCAGACTCCAAAACCTCAATTAAATCTTGATTTGTGGTGTCACTGCTACTTCTTAGTTTTAATCTTTATACTAGCCTTTCTATTTCAATGCTACATCTAGTTTCTTTAAAACAGGTCATGCTCCCTGCACACCAAATAGGTAGATACATTCCTCCACATCTTTGGCCCAAAACTCAAATACCAACTAATTTGAAAGTACTTGTAATTCTCTTGTTTACTCTTAACTTTTATACCTCGAGAGGGCTTTATTCAGGCTAACAAACTCCATTGATGCCATCAAATGTGGTGCCAATTATGTCTCCCAAGCTCGCCGTCTTCCCCATGGTAAGATTGATCTTTGGTCTTTAGCCTTCTGGGTTTAGTCATAGAGTCGTGGAATAGTAACCAAGACCTCTTGCATCCATTTCGTTCTGTGCCCACGCCAATAGGTTTTGTTGTGTTCAGTTGCTGCAGTCTCTCTGTTTAAGTTTTGATGTAATTAAGTTTACCTAATTTATAAGCTTAAACTTTTAGTCCTGTGATGATTAATTATTAATGAGGGATAGTGTTAAAATATTAATTATTAATATAATGAAATATACAGCAACCATAAGCTTAAGTTTTGGAGTTCATTGGTGATTTAACTCAAAATTTCAAGTCCAAAAGCGCGGAAGAGTAAAAATAGTTATAATAACTTTTATAATAATTCATGAGCTTAAGCTTTTGAGGTCACCGGCAATTTAACCCTCTATTTCAGCAAATCAAACAATTCCCATTCATTGTTCCAAGAAGAATAAGAGTATTTTAGGAAGAACCCAAAGTCTGTAAAGGTAGAAGTGCAGGAGTAGGCATAAAATGTCCTCATTGCCATGGACCCATGAGTGTTTTCGAAGTATGTAGGGGTAGTAGAGCTCCCTTTGCTGATTTTTAGACTACCCAGTACCTACTGTCAATGGTGTGGAAGCACCAGAAGCCCTCATTGTAAGTCACTAAGACACTCTCCTACTTTTGTTCCGCTTCCAGGATCAAGAGCTGCTAGTATATATTCAACTTAGCATATTCCATGATAAATATAATATTAAATTTGTTTTCACCTACTAACTTAAGCTTTTGGGTTGAATTGGTGATTTAAGATGATAATAGAGCAGGTGGTCTAGTGAGATCTTGTGTTCAAGCCTGTGCATTATTGCTTTCTCTCCATTTCATATTCATTTCTACTTGTTGAGTCTTTTTTCATATTTCGAGTCCATAAGTGAGGAGAGTGTTAGATATAATATTAAATTTGCCTTCACTTACTAGCTTAAACTTTTGAATTGAGTCGGTGATTTAAGATTCTAAAAAACCTTATTAACGAAATAATAAAATTATTATTTTTTTAATTCCATAAAAATACACACACACACTGAAATTCAAGTTCCCTTTGTAAACCAACAATAATCTAATGAATAATCTCCTCTAATTTCGTTAGTTTCTCCACATTTGATTATTTTGGGTTGCTTTACAACAAGTGAACACTTCCAAATTCCGTTTCTACTTTTTTTTGTTAGGTCCCGTGCACTAAAAAACCCTTAAGGAAATGAGACAATCATAACTTTTAAAAACTCATAACTTTCCCTTGTGCTTAACTTTGAAAAACGCAAGAATCTGGATTCTCCTAATAACTCAAGTTCTAAGTTTCTCAATATTTTAGACTGAAATTCTCAAACGAGAGGCAACTCCTGCCATGAGACTCCTCAATGAACTTCTGAATATGTATGACGGCTTTGACAATGAAGGATGGTTAAAGGCCTGCAGAAAATGCATGGTCGATACCTTTCCGCGAGAGGATCCATTTAGCATTCTTGTTCCAGCTGGATTCGACATTGATAAGGTACAATTTTGTAGTGCAGATTTTAATGATAAAATTGAAGAATGTCTAAACCAAGTCTACAATGTGGCTAATTCAGCTTTTGTCCTATGTTCTTTTCGTGATTAGCATCAAGGACCGTTACGGCCATCTCTTACAGTTGAAGCTGATAATACGCTATTGAGAGTAGACTTTGTTAGAGAGGTTGATGAATTACTACAGGAAGTTGGAGCAGTTCAGAGTGACGTGCAAAATGAAAATGCAGATAGTTTTGATGCGGAATCTGTGGCAAGTAGGTTGAAACAACAGGAGAAACAACGTACAATAAGGTTGGTAGAAGCGCTTCTAGATTTGGCTATGAATCTGAAGTGGTAGGGTAGCAATGAGAAATGATATATGGGCTGGGCGTAGGATATTAGTGGTAGTGGGAAGATAAGACTTATTGGATTTTTTTTCTTTCTTTTGTACAATTATAGGATAGGACATGCCAATTACATTTAAGTTAGGTTAGTTTTGGTTAAGAATTTTAGGTGATTAGTATTCTAGTATCCACTACCAATTTAGGTTTTTTAGAATGTCTTCAACCATGTTTCAAGAAAAATAAATAATTAAAAAAGAATGTCTTCAACCACTTTCTTATTTTAAATTGGTTGTCCAAATAAGAAAACAAATTTTACAAACTGTTAGACAACTGTAGATATTAACGAG

mRNA sequence

ATATATTTAAAAGTTAAATGGATTAAAAATTAAGTACATATAACATTGAACCTCTCAAATTTAAAATTTGAATACGTCAATTAGCAACTATTTGTACTCGGGGACAAAAGGTAAAATAAAAAGTTGAATATGTTTAGTTATGTTTTCTTATGAACATATTATACAACTTGGATGGACTTGATGCATCTATGATTAAATAAATTACATGAAGTTGTGGCATTTTGGAGAATGTGATGAAAGAATTTGTGTAATTTTAATTTTTAGGGATAATATCTCAAAGAAGTTTTAGAGGGATAATGATATTTTCTTCTTGCCTTTGTGTTGTTGGCTTTGATGGGGCGTTATTTTCCAGCTTCCTTTCTTTGTTTGGGAAACTAGAAAATGGAGGCACAGGTACTTTGCCTGAGGTTCTCATCACTTCCACAATTGCTCTCCACTACCCCAATCTTATCAAAGCTTTGGACATCTCGTTCCTCCAAGCACTATTCATCTGGTCTTGTTTTACGGAGGAGCTTCAGCAAAGAAGAGCCGCTTATTGATGGGCTCCCTAAAGAGTATTACGATGATGAATGGCAAGCTCGGCAAAGAGAGAAGACGAAGGAGTTACATCGAAGGCGTCAAGAGGAAGATGAAGAAGAGGACAGAAAGGTACAAGAATATCATGAAATTGGAATGCGTCTGAAAGAATTTCCAGAAGAAGATGTCAGAAAAGCTCGAAAACTGGTTTCAAGCTTTATTAGAGCTGCTGAAGAAGTTGAAGAGAAAATTGAGGAAGCTGCCGAGAAAGGGGAACTAACAGAGCTTGTTCTGTTAGTTATATGGAATCGGCTTGATTTAGCACGTTGTGATGATGAAAAGGATGCAGTTAGAAGTCTTGATCTGCTATATCGAAGGGTGGAGACTGAAATTCTCAAACGAGAGGCAACTCCTGCCATGAGACTCCTCAATGAACTTCTGAATATGTATGACGGCTTTGACAATGAAGGATGGTTAAAGGCCTGCAGAAAATGCATGGTCGATACCTTTCCGCGAGAGGATCCATTTAGCATTCTTGTTCCAGCTGGATTCGACATTGATAAGCATCAAGGACCGTTACGGCCATCTCTTACAGTTGAAGCTGATAATACGCTATTGAGAGTAGACTTTGTTAGAGAGGTTGATGAATTACTACAGGAAGTTGGAGCAGTTCAGAGTGACGTGCAAAATGAAAATGCAGATAGTTTTGATGCGGAATCTGTGGCAAGTAGGTTGAAACAACAGGAGAAACAACGTACAATAAGGTTGGTAGAAGCGCTTCTAGATTTGGCTATGAATCTGAAGTGGTAGGGTAGCAATGAGAAATGATATATGGGCTGGGCGTAGGATATTAGTGGTAGTGGGAAGATAAGACTTATTGGATTTTTTTTCTTTCTTTTGTACAATTATAGGATAGGACATGCCAATTACATTTAAGTTAGGTTAGTTTTGGTTAAGAATTTTAGGTGATTAGTATTCTAGTATCCACTACCAATTTAGGTTTTTTAGAATGTCTTCAACCATGTTTCAAGAAAAATAAATAATTAAAAAAGAATGTCTTCAACCACTTTCTTATTTTAAATTGGTTGTCCAAATAAGAAAACAAATTTTACAAACTGTTAGACAACTGTAGATATTAACGAG

Coding sequence (CDS)

ATGGAGGCACAGGTACTTTGCCTGAGGTTCTCATCACTTCCACAATTGCTCTCCACTACCCCAATCTTATCAAAGCTTTGGACATCTCGTTCCTCCAAGCACTATTCATCTGGTCTTGTTTTACGGAGGAGCTTCAGCAAAGAAGAGCCGCTTATTGATGGGCTCCCTAAAGAGTATTACGATGATGAATGGCAAGCTCGGCAAAGAGAGAAGACGAAGGAGTTACATCGAAGGCGTCAAGAGGAAGATGAAGAAGAGGACAGAAAGGTACAAGAATATCATGAAATTGGAATGCGTCTGAAAGAATTTCCAGAAGAAGATGTCAGAAAAGCTCGAAAACTGGTTTCAAGCTTTATTAGAGCTGCTGAAGAAGTTGAAGAGAAAATTGAGGAAGCTGCCGAGAAAGGGGAACTAACAGAGCTTGTTCTGTTAGTTATATGGAATCGGCTTGATTTAGCACGTTGTGATGATGAAAAGGATGCAGTTAGAAGTCTTGATCTGCTATATCGAAGGGTGGAGACTGAAATTCTCAAACGAGAGGCAACTCCTGCCATGAGACTCCTCAATGAACTTCTGAATATGTATGACGGCTTTGACAATGAAGGATGGTTAAAGGCCTGCAGAAAATGCATGGTCGATACCTTTCCGCGAGAGGATCCATTTAGCATTCTTGTTCCAGCTGGATTCGACATTGATAAGCATCAAGGACCGTTACGGCCATCTCTTACAGTTGAAGCTGATAATACGCTATTGAGAGTAGACTTTGTTAGAGAGGTTGATGAATTACTACAGGAAGTTGGAGCAGTTCAGAGTGACGTGCAAAATGAAAATGCAGATAGTTTTGATGCGGAATCTGTGGCAAGTAGGTTGAAACAACAGGAGAAACAACGTACAATAAGGTTGGTAGAAGCGCTTCTAGATTTGGCTATGAATCTGAAGTGGTAG

Protein sequence

MEAQVLCLRFSSLPQLLSTTPILSKLWTSRSSKHYSSGLVLRRSFSKEEPLIDGLPKEYYDDEWQARQREKTKELHRRRQEEDEEEDRKVQEYHEIGMRLKEFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKREATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRPSLTVEADNTLLRVDFVREVDELLQEVGAVQSDVQNENADSFDAESVASRLKQQEKQRTIRLVEALLDLAMNLKW

Homology

[Close]

BLAST of IVF0025937 vs. ExPASy Swiss-Prot
Match: Q39089 (Protein PALE CRESS, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAC PE=2 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 3.8e-107
Identity = 207/304 (68.09%), Postives = 247/304 (81.25%), Query Frame = 0


Query: 12  SLPQLLSTTPILSKLWTSRSSKHYSSGLVLRR-SFSKEEPLIDGLPKEYYDDEWQARQRE 71
           S P+++S T    KL T  S    S+    RR S + +E L++G+P EYYDDEWQARQRE
Sbjct: 16  SSPRVISAT---KKLTTELS---ISTAKFRRRCSGNNDEVLLEGMPPEYYDDEWQARQRE 75

Query: 72  KTKELHRRRQEEDEEEDRKVQEYHEIGMRLKEFPEEDVRKARKLVSSFIRAAEEVEEKIE 131
           KTKEL R ++EE+EEE+RK++EY EIG RLKEFPE+D+RKARKLVSSFIRAAEEVEE+IE
Sbjct: 76  KTKELRRMQREEEEEEERKIEEYREIGTRLKEFPEQDLRKARKLVSSFIRAAEEVEERIE 135

Query: 132 EAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKREATPAMRLLNE 191
           EAAEKGEL ELVL++IWNRLDLAR DDEKDA+RSLDLLYRRVETEILKR+A+PAM+LLN+
Sbjct: 136 EAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLND 195

Query: 192 LLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRPSLTVEADNTL 251
           LLNM+DGF+++ WLK CRK M +TFPREDPFSIL+P GFDID HQG LRP +  E DNTL
Sbjct: 196 LLNMHDGFEDDAWLKDCRKRMAETFPREDPFSILMPPGFDIDMHQGQLRPPIETETDNTL 255

Query: 252 LRVDFVREVDELLQEVGAVQSDVQNENADSFDAESVASRLKQQEKQRTIRLVEALLDLAM 311
           LRVDFVREVD LLQEV   +        +  D E++A + KQQEKQRTIR +EA+LDLA+
Sbjct: 256 LRVDFVREVDALLQEVRIEEDATTGSKGEGLDPEAIALKFKQQEKQRTIRQIEAILDLAL 313

Query: 312 NLKW 315
           NLKW
Sbjct: 316 NLKW 313

[Close]

BLAST of IVF0025937 vs. ExPASy TrEMBL
Match: A0A5D3E2R9 (Protein PALE CRESS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00420 PE=4 SV=1)

HSP 1 Score: 602.4 bits (1552), Expect = 1.1e-168
Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0


Query: 1   MEAQVLCLRFSSLPQLLSTTPILSKLWTSRSSKHYSSGLVLRRSFSKEEPLIDGLPKEYY 60
           MEAQVLCLRFSSLPQLLSTTPILSKLWTSRSSKHYSSGLVLRRSFSKEEPLIDGLPKEYY
Sbjct: 1   MEAQVLCLRFSSLPQLLSTTPILSKLWTSRSSKHYSSGLVLRRSFSKEEPLIDGLPKEYY 60

Query: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVQEYHEIGMRLKEFPEEDVRKARKLVSSFIR 120
           DDEWQARQREKTKELHRRRQEEDEEEDRKVQEYHEIGMRLKEFPEEDVRKARKLVSSFIR
Sbjct: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVQEYHEIGMRLKEFPEEDVRKARKLVSSFIR 120

Query: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180
           AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE
Sbjct: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180

Query: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240
           ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP
Sbjct: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240

Query: 241 SLTVEADNTLLRVDFVREVDELLQEVGAVQSDVQNENADSFDAESVASRLKQQEKQRTIR 300
           SLTVEADNTLLRVDFVREVDELLQEVGAVQSDVQNENADSFDAESVASRLKQQEKQRTIR
Sbjct: 241 SLTVEADNTLLRVDFVREVDELLQEVGAVQSDVQNENADSFDAESVASRLKQQEKQRTIR 300

Query: 301 LVEALLDLAMNLKW 315
           LVEALLDLAMNLKW
Sbjct: 301 LVEALLDLAMNLKW 314

[Close]

BLAST of IVF0025937 vs. ExPASy TrEMBL
Match: A0A1S3BMU2 (protein PALE CRESS, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491280 PE=4 SV=1)

HSP 1 Score: 602.4 bits (1552), Expect = 1.1e-168
Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0


Query: 1   MEAQVLCLRFSSLPQLLSTTPILSKLWTSRSSKHYSSGLVLRRSFSKEEPLIDGLPKEYY 60
           MEAQVLCLRFSSLPQLLSTTPILSKLWTSRSSKHYSSGLVLRRSFSKEEPLIDGLPKEYY
Sbjct: 1   MEAQVLCLRFSSLPQLLSTTPILSKLWTSRSSKHYSSGLVLRRSFSKEEPLIDGLPKEYY 60

Query: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVQEYHEIGMRLKEFPEEDVRKARKLVSSFIR 120
           DDEWQARQREKTKELHRRRQEEDEEEDRKVQEYHEIGMRLKEFPEEDVRKARKLVSSFIR
Sbjct: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVQEYHEIGMRLKEFPEEDVRKARKLVSSFIR 120

Query: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180
           AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE
Sbjct: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180

Query: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240
           ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP
Sbjct: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240

Query: 241 SLTVEADNTLLRVDFVREVDELLQEVGAVQSDVQNENADSFDAESVASRLKQQEKQRTIR 300
           SLTVEADNTLLRVDFVREVDELLQEVGAVQSDVQNENADSFDAESVASRLKQQEKQRTIR
Sbjct: 241 SLTVEADNTLLRVDFVREVDELLQEVGAVQSDVQNENADSFDAESVASRLKQQEKQRTIR 300

Query: 301 LVEALLDLAMNLKW 315
           LVEALLDLAMNLKW
Sbjct: 301 LVEALLDLAMNLKW 314

[Close]

BLAST of IVF0025937 vs. ExPASy TrEMBL
Match: A0A0A0KJC6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G408790 PE=4 SV=1)

HSP 1 Score: 573.2 bits (1476), Expect = 6.8e-160
Identity = 301/314 (95.86%), Postives = 304/314 (96.82%), Query Frame = 0


Query: 1   MEAQVLCLRFSSLPQLLSTTPILSKLWTSRSSKHYSSGLVLRRSFSKEEPLIDGLPKEYY 60
           MEAQ+LCLRFSSLP LLSTTPIL KLWTS SS   SSGLVLRRS SKEEPLIDGLPKEYY
Sbjct: 1   MEAQLLCLRFSSLPPLLSTTPILPKLWTSPSSHRCSSGLVLRRSLSKEEPLIDGLPKEYY 60

Query: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVQEYHEIGMRLKEFPEEDVRKARKLVSSFIR 120
           DDEWQARQREKTKELHRRRQEEDEEEDRKV+EY EIGMRLKEFPEEDVRKARKLVSSFIR
Sbjct: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVEEYREIGMRLKEFPEEDVRKARKLVSSFIR 120

Query: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180
           AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE
Sbjct: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180

Query: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240
           ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP
Sbjct: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240

Query: 241 SLTVEADNTLLRVDFVREVDELLQEVGAVQSDVQNENADSFDAESVASRLKQQEKQRTIR 300
           SL VE+DNTLLRVDFVREVDELLQEVGAVQSDVQN NADSFDAESVASRLKQQEKQRTIR
Sbjct: 241 SLAVESDNTLLRVDFVREVDELLQEVGAVQSDVQNGNADSFDAESVASRLKQQEKQRTIR 300

Query: 301 LVEALLDLAMNLKW 315
           LVEALLDLAMNLKW
Sbjct: 301 LVEALLDLAMNLKW 314

[Close]

BLAST of IVF0025937 vs. ExPASy TrEMBL
Match: A0A6J1EYI4 (protein PALE CRESS, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111437380 PE=4 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 2.8e-137
Identity = 268/314 (85.35%), Postives = 282/314 (89.81%), Query Frame = 0


Query: 1   MEAQVLCLRFSSLPQLLSTTPILSKLWTSRSSKHYSSGLVLRRSFSKEEPLIDGLPKEYY 60
           M AQV  LR S +P L S +P L KL TS   K YSS  VLRRS SKEEPLIDGLPKEYY
Sbjct: 1   MLAQVRWLRCSPVPPLPSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEYY 60

Query: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVQEYHEIGMRLKEFPEEDVRKARKLVSSFIR 120
           DDEWQARQREKTKELHRRRQEEDEEE+RKV+EY EIGMRLK FPEEDV KARKLVSSFIR
Sbjct: 61  DDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRLKGFPEEDVIKARKLVSSFIR 120

Query: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180
           A EEVEEKIEEAAEKGELTELVLLVIWNRLDLAR DDEKDA+RSLDLLYRRVETEILKRE
Sbjct: 121 AVEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRE 180

Query: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240
           A+PAMRLLN+LLNMYD F++EGWLK CRKCM+DTFPREDPFSILVPAGFDIDKHQG LRP
Sbjct: 181 ASPAMRLLNDLLNMYDNFNDEGWLKDCRKCMIDTFPREDPFSILVPAGFDIDKHQGQLRP 240

Query: 241 SLTVEADNTLLRVDFVREVDELLQEVGAVQSDVQNENADSFDAESVASRLKQQEKQRTIR 300
           SL VEADNTLLRVDFVREVDELLQEV A QS+VQN NAD FDAESVASRLKQQEKQRT+R
Sbjct: 241 SLEVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFDAESVASRLKQQEKQRTVR 300

Query: 301 LVEALLDLAMNLKW 315
           LVE LL+LAMNL+W
Sbjct: 301 LVETLLELAMNLEW 314

[Close]

BLAST of IVF0025937 vs. ExPASy TrEMBL
Match: A0A6J1K329 (protein PALE CRESS, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111491264 PE=4 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 1.8e-136
Identity = 267/314 (85.03%), Postives = 282/314 (89.81%), Query Frame = 0


Query: 1   MEAQVLCLRFSSLPQLLSTTPILSKLWTSRSSKHYSSGLVLRRSFSKEEPLIDGLPKEYY 60
           M AQVL LR S +P L S +P L KL TS   K YSS  VLRRS SKEEPLIDGLPKEYY
Sbjct: 1   MLAQVLWLRCSPVPPLPSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEYY 60

Query: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVQEYHEIGMRLKEFPEEDVRKARKLVSSFIR 120
           DDEWQARQREKTKELHRRRQEEDEEE+RKV+EY EIGMRLK FPEEDVRKARKLVSSFIR
Sbjct: 61  DDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRLKGFPEEDVRKARKLVSSFIR 120

Query: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180
           A EEVEEKIEEAAEKGELTELVLLVIWNRLDLAR DDEKDA+RSLDLLYRRVETEILKRE
Sbjct: 121 AVEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRE 180

Query: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240
           A+PAMRLLN+LLNMYD F++EGWLK CRK M+DTFPREDPFSILVPAGFDIDKHQG LRP
Sbjct: 181 ASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFSILVPAGFDIDKHQGQLRP 240

Query: 241 SLTVEADNTLLRVDFVREVDELLQEVGAVQSDVQNENADSFDAESVASRLKQQEKQRTIR 300
           SL VEADNTLLRVDFVREVDELLQEV A QS+VQN NAD FDAESVASRLK QEKQR++R
Sbjct: 241 SLEVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFDAESVASRLKHQEKQRSVR 300

Query: 301 LVEALLDLAMNLKW 315
           LVE LL+LAMNL+W
Sbjct: 301 LVETLLELAMNLEW 314

[Close]

BLAST of IVF0025937 vs. NCBI nr
Match: XP_008449384.1 (PREDICTED: protein PALE CRESS, chloroplastic [Cucumis melo] >TYK30069.1 protein PALE CRESS [Cucumis melo var. makuwa])

HSP 1 Score: 599 bits (1544), Expect = 1.84e-215
Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0


Query: 1   MEAQVLCLRFSSLPQLLSTTPILSKLWTSRSSKHYSSGLVLRRSFSKEEPLIDGLPKEYY 60
           MEAQVLCLRFSSLPQLLSTTPILSKLWTSRSSKHYSSGLVLRRSFSKEEPLIDGLPKEYY
Sbjct: 1   MEAQVLCLRFSSLPQLLSTTPILSKLWTSRSSKHYSSGLVLRRSFSKEEPLIDGLPKEYY 60

Query: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVQEYHEIGMRLKEFPEEDVRKARKLVSSFIR 120
           DDEWQARQREKTKELHRRRQEEDEEEDRKVQEYHEIGMRLKEFPEEDVRKARKLVSSFIR
Sbjct: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVQEYHEIGMRLKEFPEEDVRKARKLVSSFIR 120

Query: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180
           AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE
Sbjct: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180

Query: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240
           ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP
Sbjct: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240

Query: 241 SLTVEADNTLLRVDFVREVDELLQEVGAVQSDVQNENADSFDAESVASRLKQQEKQRTIR 300
           SLTVEADNTLLRVDFVREVDELLQEVGAVQSDVQNENADSFDAESVASRLKQQEKQRTIR
Sbjct: 241 SLTVEADNTLLRVDFVREVDELLQEVGAVQSDVQNENADSFDAESVASRLKQQEKQRTIR 300

Query: 301 LVEALLDLAMNLKW 314
           LVEALLDLAMNLKW
Sbjct: 301 LVEALLDLAMNLKW 314

[Close]

BLAST of IVF0025937 vs. NCBI nr
Match: XP_004140086.1 (protein PALE CRESS, chloroplastic [Cucumis sativus] >KGN47871.1 hypothetical protein Csa_002854 [Cucumis sativus])

HSP 1 Score: 570 bits (1468), Expect = 7.04e-204
Identity = 301/314 (95.86%), Postives = 304/314 (96.82%), Query Frame = 0


Query: 1   MEAQVLCLRFSSLPQLLSTTPILSKLWTSRSSKHYSSGLVLRRSFSKEEPLIDGLPKEYY 60
           MEAQ+LCLRFSSLP LLSTTPIL KLWTS SS   SSGLVLRRS SKEEPLIDGLPKEYY
Sbjct: 1   MEAQLLCLRFSSLPPLLSTTPILPKLWTSPSSHRCSSGLVLRRSLSKEEPLIDGLPKEYY 60

Query: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVQEYHEIGMRLKEFPEEDVRKARKLVSSFIR 120
           DDEWQARQREKTKELHRRRQEEDEEEDRKV+EY EIGMRLKEFPEEDVRKARKLVSSFIR
Sbjct: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVEEYREIGMRLKEFPEEDVRKARKLVSSFIR 120

Query: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180
           AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE
Sbjct: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180

Query: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240
           ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP
Sbjct: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240

Query: 241 SLTVEADNTLLRVDFVREVDELLQEVGAVQSDVQNENADSFDAESVASRLKQQEKQRTIR 300
           SL VE+DNTLLRVDFVREVDELLQEVGAVQSDVQN NADSFDAESVASRLKQQEKQRTIR
Sbjct: 241 SLAVESDNTLLRVDFVREVDELLQEVGAVQSDVQNGNADSFDAESVASRLKQQEKQRTIR 300

Query: 301 LVEALLDLAMNLKW 314
           LVEALLDLAMNLKW
Sbjct: 301 LVEALLDLAMNLKW 314

[Close]

BLAST of IVF0025937 vs. NCBI nr
Match: XP_038888470.1 (protein PALE CRESS, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 546 bits (1406), Expect = 1.97e-194
Identity = 291/314 (92.68%), Postives = 297/314 (94.59%), Query Frame = 0


Query: 1   MEAQVLCLRFSSLPQLLSTTPILSKLWTSRSSKHYSSGLVLRRSFSKEEPLIDGLPKEYY 60
           MEAQVLCLRFS +P LLST+ IL KLWTSR  KHYSSG VLRRS SKEEPLIDGLPKEYY
Sbjct: 1   MEAQVLCLRFSPVPPLLSTSSILPKLWTSRFLKHYSSGPVLRRSLSKEEPLIDGLPKEYY 60

Query: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVQEYHEIGMRLKEFPEEDVRKARKLVSSFIR 120
           DDEWQARQREKTKELHRRRQEEDEEEDRKV+EY EIGMRLK FPEEDVRKARKLVSSFIR
Sbjct: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVEEYREIGMRLKGFPEEDVRKARKLVSSFIR 120

Query: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180
           AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLAR DDEKDA+RSLDLLYRRVETEILKRE
Sbjct: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARHDDEKDAIRSLDLLYRRVETEILKRE 180

Query: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240
           ATPAMRLLNELLNMYDGFD+EGWLK CRK MVDTFPREDPFSILVPAGFDIDKHQGPLRP
Sbjct: 181 ATPAMRLLNELLNMYDGFDDEGWLKNCRKRMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240

Query: 241 SLTVEADNTLLRVDFVREVDELLQEVGAVQSDVQNENADSFDAESVASRLKQQEKQRTIR 300
           SL VEADNTLLRVDFVREVDELLQEVGA QS+VQN NAD FDAESVASRLKQQEKQRTIR
Sbjct: 241 SLEVEADNTLLRVDFVREVDELLQEVGADQSEVQNGNADGFDAESVASRLKQQEKQRTIR 300

Query: 301 LVEALLDLAMNLKW 314
           LVEALLDLAMNLKW
Sbjct: 301 LVEALLDLAMNLKW 314

[Close]

BLAST of IVF0025937 vs. NCBI nr
Match: XP_022931090.1 (protein PALE CRESS, chloroplastic [Cucurbita moschata])

HSP 1 Score: 494 bits (1273), Expect = 3.57e-174
Identity = 268/314 (85.35%), Postives = 282/314 (89.81%), Query Frame = 0


Query: 1   MEAQVLCLRFSSLPQLLSTTPILSKLWTSRSSKHYSSGLVLRRSFSKEEPLIDGLPKEYY 60
           M AQV  LR S +P L S +P L KL TS   K YSS  VLRRS SKEEPLIDGLPKEYY
Sbjct: 1   MLAQVRWLRCSPVPPLPSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEYY 60

Query: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVQEYHEIGMRLKEFPEEDVRKARKLVSSFIR 120
           DDEWQARQREKTKELHRRRQEEDEEE+RKV+EY EIGMRLK FPEEDV KARKLVSSFIR
Sbjct: 61  DDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRLKGFPEEDVIKARKLVSSFIR 120

Query: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180
           A EEVEEKIEEAAEKGELTELVLLVIWNRLDLAR DDEKDA+RSLDLLYRRVETEILKRE
Sbjct: 121 AVEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRE 180

Query: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240
           A+PAMRLLN+LLNMYD F++EGWLK CRKCM+DTFPREDPFSILVPAGFDIDKHQG LRP
Sbjct: 181 ASPAMRLLNDLLNMYDNFNDEGWLKDCRKCMIDTFPREDPFSILVPAGFDIDKHQGQLRP 240

Query: 241 SLTVEADNTLLRVDFVREVDELLQEVGAVQSDVQNENADSFDAESVASRLKQQEKQRTIR 300
           SL VEADNTLLRVDFVREVDELLQEV A QS+VQN NAD FDAESVASRLKQQEKQRT+R
Sbjct: 241 SLEVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFDAESVASRLKQQEKQRTVR 300

Query: 301 LVEALLDLAMNLKW 314
           LVE LL+LAMNL+W
Sbjct: 301 LVETLLELAMNLEW 314

[Close]

BLAST of IVF0025937 vs. NCBI nr
Match: XP_022995861.1 (protein PALE CRESS, chloroplastic [Cucurbita maxima])

HSP 1 Score: 492 bits (1266), Expect = 4.15e-173
Identity = 267/314 (85.03%), Postives = 282/314 (89.81%), Query Frame = 0


Query: 1   MEAQVLCLRFSSLPQLLSTTPILSKLWTSRSSKHYSSGLVLRRSFSKEEPLIDGLPKEYY 60
           M AQVL LR S +P L S +P L KL TS   K YSS  VLRRS SKEEPLIDGLPKEYY
Sbjct: 1   MLAQVLWLRCSPVPPLPSASPTLPKLSTSYFLKLYSSRPVLRRSLSKEEPLIDGLPKEYY 60

Query: 61  DDEWQARQREKTKELHRRRQEEDEEEDRKVQEYHEIGMRLKEFPEEDVRKARKLVSSFIR 120
           DDEWQARQREKTKELHRRRQEEDEEE+RKV+EY EIGMRLK FPEEDVRKARKLVSSFIR
Sbjct: 61  DDEWQARQREKTKELHRRRQEEDEEEERKVEEYREIGMRLKGFPEEDVRKARKLVSSFIR 120

Query: 121 AAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKRE 180
           A EEVEEKIEEAAEKGELTELVLLVIWNRLDLAR DDEKDA+RSLDLLYRRVETEILKRE
Sbjct: 121 AVEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRE 180

Query: 181 ATPAMRLLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRP 240
           A+PAMRLLN+LLNMYD F++EGWLK CRK M+DTFPREDPFSILVPAGFDIDKHQG LRP
Sbjct: 181 ASPAMRLLNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFSILVPAGFDIDKHQGQLRP 240

Query: 241 SLTVEADNTLLRVDFVREVDELLQEVGAVQSDVQNENADSFDAESVASRLKQQEKQRTIR 300
           SL VEADNTLLRVDFVREVDELLQEV A QS+VQN NAD FDAESVASRLK QEKQR++R
Sbjct: 241 SLEVEADNTLLRVDFVREVDELLQEVRADQSEVQNANADGFDAESVASRLKHQEKQRSVR 300

Query: 301 LVEALLDLAMNLKW 314
           LVE LL+LAMNL+W
Sbjct: 301 LVETLLELAMNLEW 314

[Close]

BLAST of IVF0025937 vs. TAIR 10
Match: AT2G48120.1 (pale cress protein (PAC) )

HSP 1 Score: 389.4 bits (999), Expect = 2.7e-108
Identity = 207/304 (68.09%), Postives = 247/304 (81.25%), Query Frame = 0


Query: 12  SLPQLLSTTPILSKLWTSRSSKHYSSGLVLRR-SFSKEEPLIDGLPKEYYDDEWQARQRE 71
           S P+++S T    KL T  S    S+    RR S + +E L++G+P EYYDDEWQARQRE
Sbjct: 16  SSPRVISAT---KKLTTELS---ISTAKFRRRCSGNNDEVLLEGMPPEYYDDEWQARQRE 75

Query: 72  KTKELHRRRQEEDEEEDRKVQEYHEIGMRLKEFPEEDVRKARKLVSSFIRAAEEVEEKIE 131
           KTKEL R ++EE+EEE+RK++EY EIG RLKEFPE+D+RKARKLVSSFIRAAEEVEE+IE
Sbjct: 76  KTKELRRMQREEEEEEERKIEEYREIGTRLKEFPEQDLRKARKLVSSFIRAAEEVEERIE 135

Query: 132 EAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKREATPAMRLLNE 191
           EAAEKGEL ELVL++IWNRLDLAR DDEKDA+RSLDLLYRRVETEILKR+A+PAM+LLN+
Sbjct: 136 EAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLND 195

Query: 192 LLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRPSLTVEADNTL 251
           LLNM+DGF+++ WLK CRK M +TFPREDPFSIL+P GFDID HQG LRP +  E DNTL
Sbjct: 196 LLNMHDGFEDDAWLKDCRKRMAETFPREDPFSILMPPGFDIDMHQGQLRPPIETETDNTL 255

Query: 252 LRVDFVREVDELLQEVGAVQSDVQNENADSFDAESVASRLKQQEKQRTIRLVEALLDLAM 311
           LRVDFVREVD LLQEV   +        +  D E++A + KQQEKQRTIR +EA+LDLA+
Sbjct: 256 LRVDFVREVDALLQEVRIEEDATTGSKGEGLDPEAIALKFKQQEKQRTIRQIEAILDLAL 313

Query: 312 NLKW 315
           NLKW
Sbjct: 316 NLKW 313

[Close]

BLAST of IVF0025937 vs. TAIR 10
Match: AT2G48120.2 (pale cress protein (PAC) )

HSP 1 Score: 370.5 bits (950), Expect = 1.3e-102
Identity = 201/304 (66.12%), Postives = 241/304 (79.28%), Query Frame = 0


Query: 12  SLPQLLSTTPILSKLWTSRSSKHYSSGLVLRR-SFSKEEPLIDGLPKEYYDDEWQARQRE 71
           S P+++S T    KL T  S    S+    RR S + +E L++G+P EYYDD      RE
Sbjct: 16  SSPRVISAT---KKLTTELS---ISTAKFRRRCSGNNDEVLLEGMPPEYYDD------RE 75

Query: 72  KTKELHRRRQEEDEEEDRKVQEYHEIGMRLKEFPEEDVRKARKLVSSFIRAAEEVEEKIE 131
           KTKEL R ++EE+EEE+RK++EY EIG RLKEFPE+D+RKARKLVSSFIRAAEEVEE+IE
Sbjct: 76  KTKELRRMQREEEEEEERKIEEYREIGTRLKEFPEQDLRKARKLVSSFIRAAEEVEERIE 135

Query: 132 EAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKREATPAMRLLNE 191
           EAAEKGEL ELVL++IWNRLDLAR DDEKDA+RSLDLLYRRVETEILKR+A+PAM+LLN+
Sbjct: 136 EAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLND 195

Query: 192 LLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRPSLTVEADNTL 251
           LLNM+DGF+++ WLK CRK M +TFPREDPFSIL+P GFDID HQG LRP +  E DNTL
Sbjct: 196 LLNMHDGFEDDAWLKDCRKRMAETFPREDPFSILMPPGFDIDMHQGQLRPPIETETDNTL 255

Query: 252 LRVDFVREVDELLQEVGAVQSDVQNENADSFDAESVASRLKQQEKQRTIRLVEALLDLAM 311
           LRVDFVREVD LLQEV   +        +  D E++A + KQQEKQRTIR +EA+LDLA+
Sbjct: 256 LRVDFVREVDALLQEVRIEEDATTGSKGEGLDPEAIALKFKQQEKQRTIRQIEAILDLAL 307

Query: 312 NLKW 315
           NLKW
Sbjct: 316 NLKW 307

The following BLAST results are available for this feature:

BLAST of IVF0025937 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39089	3.8e-107	68.09	Protein PALE CRESS, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAC PE=2 SV...	[more]

BLAST of IVF0025937 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E2R9	1.1e-168	100.00	Protein PALE CRESS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G0...	[more]
A0A1S3BMU2	1.1e-168	100.00	protein PALE CRESS, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491280 PE=4 S...	[more]
A0A0A0KJC6	6.8e-160	95.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G408790 PE=4 SV=1	[more]
A0A6J1EYI4	2.8e-137	85.35	protein PALE CRESS, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111437380 ...	[more]
A0A6J1K329	1.8e-136	85.03	protein PALE CRESS, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111491264 PE...	[more]

BLAST of IVF0025937 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449384.1	1.84e-215	100.00	PREDICTED: protein PALE CRESS, chloroplastic [Cucumis melo] >TYK30069.1 protein ...	[more]
XP_004140086.1	7.04e-204	95.86	protein PALE CRESS, chloroplastic [Cucumis sativus] >KGN47871.1 hypothetical pro...	[more]
XP_038888470.1	1.97e-194	92.68	protein PALE CRESS, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_022931090.1	3.57e-174	85.35	protein PALE CRESS, chloroplastic [Cucurbita moschata]	[more]
XP_022995861.1	4.15e-173	85.03	protein PALE CRESS, chloroplastic [Cucurbita maxima]	[more]

BLAST of IVF0025937 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G48120.1	2.7e-108	68.09	pale cress protein (PAC)	[more]
AT2G48120.2	1.3e-102	66.12	pale cress protein (PAC)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 115..142
IPR034563	Protein PALE CRESS	PANTHER	PTHR37219	PROTEIN PALE CRESS, CHLOROPLASTIC	coord: 1..314

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0025937.1	IVF0025937.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071482	cellular response to light stimulus
biological_process	GO:0010239	chloroplast mRNA processing
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0048366	leaf development
cellular_component	GO:0009501	amyloplast
cellular_component	GO:0042644	chloroplast nucleoid
cellular_component	GO:0009509	chromoplast
cellular_component	GO:0009513	etioplast
cellular_component	GO:0009537	proplastid
cellular_component	GO:0009536	plastid
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0019843	rRNA binding