IVF0025883 (gene) Melon (IVF77) v1

Overview
NameIVF0025883
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionStAR lipid transfer-like protein
Locationtig00195367: 474681 .. 476993 (+)
RNA-Seq ExpressionIVF0025883
SyntenyIVF0025883
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTACCTCCTATGGGCTCTATATTGTCGACGGCGACGGCGACTGAATTACAAGGAAAGCAACGCAAAAGCGGAGAAAGAGATGGAGGAGAACGGAGGAAGCGACGGTGGTAGCAACGCCCATTGGTGGTGGGCTTTCGCCGGTGCAGGGCAGTTAGGTTGGGGTATCGCCTCTTTCCGGCGAGGATTTGTCGGTGATTCCAGCACCATGCCCCTTAAGGCCTTCGCCGTCGCTTCGCTTTTCGTCGGCGCTGCCGCCTCGTCTGCCATTGCTTCCCTCAAGGCCTCTGGCATCCACAAGGTTCACTTCACTGCTTTTCTACTGTGTATCTATCAGTCGCATTTTTTTCTTCATTCCTCCCCCTCATCCTGGATTAGGTTAGAGGTTAATTGGACGACTTTGATCAGTCTGGTTTTGTACTCGTATCGGGCTTTGGTGAATTAACTGAACATATCAGTTTTGATTCGTCAGTATGCCGTGAATTTAGCTAATTTCCAGGAGGAATGGGATTCTGAGTTTTTGGCAGCTTAGTTAGCTTAATTTGTTAATGTTTGATTCGGACTATCAATTTCGTTGACTTGAATAGTGAAATCGAGCAGGGGATGGAAAAATACTTCAGTAGGTGTCAGTTTCTTTGGTCGCATTAGATTATTTGTTGCTGATGCCAGATTTTAGTCGTGTTGTTTATCTCGGGCAGTTTGTTCACCAGGCTTGATGTTGTGCTTAAGTTCGAGAATCTTCTCAGTTGAATTTAGGTATTTTTATTTTGAGTGGTTGATTCATGCATATTTTTCATGTAGTTTTTTTTGGGTGTTATCCACTTCTTTACATTTAGAGGTTTAGGGTATGGGAAACTAAAAGTTTGTAACTTTCATAAACCTCATTTCAAGAGTACTCATAGAATATAATATTTTAGAATGTTGGACAGAAAGTGTAATGATGGAGTGGTGAATAGGACGCTCAGCAGAATTAAGTCTAAAAGAATGACATTCAAGCACAAACCCTTCGCCCAAAATTCTAATTTTTTTCTACTTCAAGATAATTTTGAAACCTTTATGGAGCAATTTTTGATAAAGGATAAAGTTCAAGAGTGTCTTTTTAGATAAAATAAAATTTAGTCTAAATTCTGGTACACTTAGAAACCACATACAAGTTGAGGCTTTGCCTCCTTCAAGTGGCCACCCTTATTGTAAAGGTGTGATCCTTCGAGTGAGAATTTAAGCTTTCCTTGTCTTTCCGTAGAAAGTGGTGTTAAACTCAATTCTGTAGCTTCTGTCAGTTCAATGCAAAAGTAACAGATGATTTTCTCGGTTAATAAGAATAACTGTAGAGTATCTGTTGTTTAGGAGTATGCAGGATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTCTTTTTTTTTAATGTCCTAGCTTCACGGTAATTGGTACATGATAGGCAGAGGTAATTTGAACATATTAAGAGCGATGCTATTTCACATAGGTGAAAGCCTCCATGATCAACAAGGTGGTAGATAGCATTCATGGTTATGAGAGGCTTGTGATATAGAAATAGGATCTCCATGACACCGTTATGAACTTAGAAGAACTTTGGTGACCAGAAATGGTTCTTTTTTTTTTCCTTCTTGTTCTAATGGATGAACAGATGAAGCCATTGTTATCAGTTCTTACAAAATCATGGGTTGGTGGAAATAATTTCAATGGACGCAGAATTTCTTAAAAAGTGTTCTGATCTGGACGAAAGAAAAGGAGAACATGTCTGAAAAACAAATTTACTAGATCTAGAAATGGGTGATAAAATGAATGGTACGATTACTAATTTTTGGTCTAGGGTTGTATTGGAACAGGTGGAAGACGTGATGGAAGTAGGGGCCAGAATCAGAAGTGGATTGGGGATTCGTTCAAGGGCACAAGATAAATGAGTATGGCAGCCTTTGTTATTCTATTCTGTGGGTAACTGGGAACATCTTCACTTTCACTTTGAGGAGCGCATATTCTCACCAACATGAGTCAACTAAAGTCATTCCATAGCACAGACTGAGCACTTTCTTCGATGGTGAAAGAGTTACGAAGGGTCAGATTCCATTTTTCTTTATCAACCCTTAATTTGGTACTTGCTCTTATAGAGAGGTCTCCTATAATTATTTTGCTGTGTAGCAATGAAATCAGATCACTGATTAAGGGCTTAGAGAGTTCTTCTAAATTGCCCTTAATTTACTTTACTGTTTACTTTAGATGTCCAACCTTCCTAAAACAACGATTTCATTTTTTATTTAGGTAAAATCCTCTATGCTGATTTGTCCT

mRNA sequence

ATGGCCTACCTCCTATGGGCTCTATATTGTCGACGGCGACGGCGACTGAATTACAAGGAAAGCAACGCAAAAGCGGAGAAAGAGATGGAGGAGAACGGAGGAAGCGACGGTGGTAGCAACGCCCATTGGTGGTGGGCTTTCGCCGGTGCAGGGCAGTTAGGTTGGGGTATCGCCTCTTTCCGGCGAGGATTTGTCGGTGATTCCAGCACCATGCCCCTTAAGGCCTTCGCCGTCGCTTCGCTTTTCGTCGGCGCTGCCGCCTCGTCTGCCATTGCTTCCCTCAAGGCCTCTGGCATCCACAAGGTGGAAGACGTGATGGAAGTAGGGGCCAGAATCAGAAGTGGATTGGGGATTCGTTCAAGGGCACAAGATAAATGAGTATGGCAGCCTTTGTTATTCTATTCTGTGGGTAACTGGGAACATCTTCACTTTCACTTTGAGGAGCGCATATTCTCACCAACATGAGTCAACTAAAGTCATTCCATAGCACAGACTGAGCACTTTCTTCGATGGTGAAAGAGTTACGAAGGGTCAGATTCCATTTTTCTTTATCAACCCTTAATTTGGTACTTGCTCTTATAGAGAGGTCTCCTATAATTATTTTGCTGTGTAGCAATGAAATCAGATCACTGATTAAGGGCTTAGAGAGTTCTTCTAAATTGCCCTTAATTTACTTTACTGTTTACTTTAGATGTCCAACCTTCCTAAAACAACGATTTCATTTTTTATTTAGGTAAAATCCTCTATGCTGATTTGTCCT

Coding sequence (CDS)

ATGGCCTACCTCCTATGGGCTCTATATTGTCGACGGCGACGGCGACTGAATTACAAGGAAAGCAACGCAAAAGCGGAGAAAGAGATGGAGGAGAACGGAGGAAGCGACGGTGGTAGCAACGCCCATTGGTGGTGGGCTTTCGCCGGTGCAGGGCAGTTAGGTTGGGGTATCGCCTCTTTCCGGCGAGGATTTGTCGGTGATTCCAGCACCATGCCCCTTAAGGCCTTCGCCGTCGCTTCGCTTTTCGTCGGCGCTGCCGCCTCGTCTGCCATTGCTTCCCTCAAGGCCTCTGGCATCCACAAGGTGGAAGACGTGATGGAAGTAGGGGCCAGAATCAGAAGTGGATTGGGGATTCGTTCAAGGGCACAAGATAAATGA

Protein sequence

MAYLLWALYCRRRRRLNYKESNAKAEKEMEENGGSDGGSNAHWWWAFAGAGQLGWGIASFRRGFVGDSSTMPLKAFAVASLFVGAAASSAIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK
Homology
BLAST of IVF0025883 vs. ExPASy TrEMBL
Match: A0A1S3AUW2 (uncharacterized protein LOC103483131 OS=Cucumis melo OX=3656 GN=LOC103483131 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.4e-60
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0

Query: 1   MAYLLWALYCRRRRRLNYKESNAKAEKEMEENGGSDGGSNAHWWWAFAGAGQLGWGIASF 60
           MAYLLWALYCRRRRRLNYKESNAKAEKEMEENGGSDGGSNAHWWWAFAGAGQLGWGIASF
Sbjct: 1   MAYLLWALYCRRRRRLNYKESNAKAEKEMEENGGSDGGSNAHWWWAFAGAGQLGWGIASF 60

Query: 61  RRGFVGDSSTMPLKAFAVASLFVGAAASSAIASLKASGIHKVEDVMEVGARIRSGLGIRS 120
           RRGFVGDSSTMPLKAFAVASLFVGAAASSAIASLKASGIHKVEDVMEVGARIRSGLGIRS
Sbjct: 61  RRGFVGDSSTMPLKAFAVASLFVGAAASSAIASLKASGIHKVEDVMEVGARIRSGLGIRS 120

Query: 121 RAQDK 126
           RAQDK
Sbjct: 121 RAQDK 125

BLAST of IVF0025883 vs. ExPASy TrEMBL
Match: A0A0A0L700 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118070 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.5e-41
Identity = 92/97 (94.85%), Postives = 93/97 (95.88%), Query Frame = 0

Query: 29  MEENGGSDGGSNAHWWWAFAGAGQLGWGIASFRRGFVGDSSTMPLKAFAVASLFVGAAAS 88
           MEENGGSD GSNAHWWWAFAGA QLGWGIASFRRGF+GDSS MPLKAFAVASLFVGAAAS
Sbjct: 1   MEENGGSDAGSNAHWWWAFAGAAQLGWGIASFRRGFIGDSSNMPLKAFAVASLFVGAAAS 60

Query: 89  SAIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK 126
           S IASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK
Sbjct: 61  STIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK 97

BLAST of IVF0025883 vs. ExPASy TrEMBL
Match: A0A6J1IIU1 (uncharacterized protein LOC111473617 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111474468 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 4.5e-38
Identity = 86/107 (80.37%), Postives = 93/107 (86.92%), Query Frame = 0

Query: 19  KESNAKAEKEMEENGGSDGGSNAHWWWAFAGAGQLGWGIASFRRGFVGDSSTMPLKAFAV 78
           KE     E+EM ENGGSDGGSNAHWWWA AGA QLGWGIASFRRG +GDSS MP KAFAV
Sbjct: 18  KEKGESREREMVENGGSDGGSNAHWWWALAGATQLGWGIASFRRGVIGDSSLMPFKAFAV 77

Query: 79  ASLFVGAAASSAIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK 126
           ASLFVGAA+SSAIASLKA+GIHKVEDVMEVGA IR+GLGIR R +D+
Sbjct: 78  ASLFVGAASSSAIASLKAAGIHKVEDVMEVGANIRNGLGIRPRTRDE 124

BLAST of IVF0025883 vs. ExPASy TrEMBL
Match: A0A6J1FMU0 (uncharacterized protein LOC111446882 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446882 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 5.9e-38
Identity = 86/107 (80.37%), Postives = 92/107 (85.98%), Query Frame = 0

Query: 19  KESNAKAEKEMEENGGSDGGSNAHWWWAFAGAGQLGWGIASFRRGFVGDSSTMPLKAFAV 78
           KE     E+EM ENGGSDGGSNAHWWWA AGA Q GWGIASFRRG +GDSS MP KAFAV
Sbjct: 18  KEKGESREREMVENGGSDGGSNAHWWWALAGATQFGWGIASFRRGVIGDSSLMPFKAFAV 77

Query: 79  ASLFVGAAASSAIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK 126
           ASLFVGAAASSAIASLKA+GIHKVEDVMEVGA IR+GLGIR R +D+
Sbjct: 78  ASLFVGAAASSAIASLKAAGIHKVEDVMEVGANIRTGLGIRPRTRDE 124

BLAST of IVF0025883 vs. ExPASy TrEMBL
Match: A0A6J1E8F9 (uncharacterized protein LOC111431802 OS=Cucurbita moschata OX=3662 GN=LOC111431802 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 3.2e-36
Identity = 84/106 (79.25%), Postives = 90/106 (84.91%), Query Frame = 0

Query: 20  ESNAKAEKEMEENGGSDGGSNAHWWWAFAGAGQLGWGIASFRRGFVGDSSTMPLKAFAVA 79
           E +   +KEMEENGGSDG SNAHWWWA  GA QLGWGIASFRRG +G+SS MPLKAFAVA
Sbjct: 5   EKSETGQKEMEENGGSDGVSNAHWWWALPGATQLGWGIASFRRGLIGNSSLMPLKAFAVA 64

Query: 80  SLFVGAAASSAIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK 126
           SLFVG  AS AIASLKASGIHKVED+MEVGA IRSGLGIR R QD+
Sbjct: 65  SLFVGGGASCAIASLKASGIHKVEDMMEVGASIRSGLGIRPRPQDE 110

BLAST of IVF0025883 vs. NCBI nr
Match: XP_008437814.1 (PREDICTED: uncharacterized protein LOC103483131 [Cucumis melo])

HSP 1 Score: 245 bits (625), Expect = 1.29e-81
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0

Query: 1   MAYLLWALYCRRRRRLNYKESNAKAEKEMEENGGSDGGSNAHWWWAFAGAGQLGWGIASF 60
           MAYLLWALYCRRRRRLNYKESNAKAEKEMEENGGSDGGSNAHWWWAFAGAGQLGWGIASF
Sbjct: 1   MAYLLWALYCRRRRRLNYKESNAKAEKEMEENGGSDGGSNAHWWWAFAGAGQLGWGIASF 60

Query: 61  RRGFVGDSSTMPLKAFAVASLFVGAAASSAIASLKASGIHKVEDVMEVGARIRSGLGIRS 120
           RRGFVGDSSTMPLKAFAVASLFVGAAASSAIASLKASGIHKVEDVMEVGARIRSGLGIRS
Sbjct: 61  RRGFVGDSSTMPLKAFAVASLFVGAAASSAIASLKASGIHKVEDVMEVGARIRSGLGIRS 120

Query: 121 RAQDK 125
           RAQDK
Sbjct: 121 RAQDK 125

BLAST of IVF0025883 vs. NCBI nr
Match: XP_004133779.1 (uncharacterized protein LOC101221895 [Cucumis sativus] >KGN56372.1 hypothetical protein Csa_009626 [Cucumis sativus])

HSP 1 Score: 181 bits (459), Expect = 1.08e-56
Identity = 92/97 (94.85%), Postives = 93/97 (95.88%), Query Frame = 0

Query: 29  MEENGGSDGGSNAHWWWAFAGAGQLGWGIASFRRGFVGDSSTMPLKAFAVASLFVGAAAS 88
           MEENGGSD GSNAHWWWAFAGA QLGWGIASFRRGF+GDSS MPLKAFAVASLFVGAAAS
Sbjct: 1   MEENGGSDAGSNAHWWWAFAGAAQLGWGIASFRRGFIGDSSNMPLKAFAVASLFVGAAAS 60

Query: 89  SAIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK 125
           S IASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK
Sbjct: 61  STIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK 97

BLAST of IVF0025883 vs. NCBI nr
Match: XP_022974845.1 (uncharacterized protein LOC111473617 isoform X1 [Cucurbita maxima] >XP_022975308.1 uncharacterized protein LOC111474468 isoform X1 [Cucurbita maxima])

HSP 1 Score: 170 bits (431), Expect = 4.68e-52
Identity = 86/107 (80.37%), Postives = 93/107 (86.92%), Query Frame = 0

Query: 19  KESNAKAEKEMEENGGSDGGSNAHWWWAFAGAGQLGWGIASFRRGFVGDSSTMPLKAFAV 78
           KE     E+EM ENGGSDGGSNAHWWWA AGA QLGWGIASFRRG +GDSS MP KAFAV
Sbjct: 18  KEKGESREREMVENGGSDGGSNAHWWWALAGATQLGWGIASFRRGVIGDSSLMPFKAFAV 77

Query: 79  ASLFVGAAASSAIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK 125
           ASLFVGAA+SSAIASLKA+GIHKVEDVMEVGA IR+GLGIR R +D+
Sbjct: 78  ASLFVGAASSSAIASLKAAGIHKVEDVMEVGANIRNGLGIRPRTRDE 124

BLAST of IVF0025883 vs. NCBI nr
Match: XP_022941577.1 (uncharacterized protein LOC111446882 isoform X2 [Cucurbita moschata] >KAG7028515.1 hypothetical protein SDJN02_09696, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 170 bits (430), Expect = 6.64e-52
Identity = 86/107 (80.37%), Postives = 92/107 (85.98%), Query Frame = 0

Query: 19  KESNAKAEKEMEENGGSDGGSNAHWWWAFAGAGQLGWGIASFRRGFVGDSSTMPLKAFAV 78
           KE     E+EM ENGGSDGGSNAHWWWA AGA Q GWGIASFRRG +GDSS MP KAFAV
Sbjct: 18  KEKGESREREMVENGGSDGGSNAHWWWALAGATQFGWGIASFRRGVIGDSSLMPFKAFAV 77

Query: 79  ASLFVGAAASSAIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK 125
           ASLFVGAAASSAIASLKA+GIHKVEDVMEVGA IR+GLGIR R +D+
Sbjct: 78  ASLFVGAAASSAIASLKAAGIHKVEDVMEVGANIRTGLGIRPRTRDE 124

BLAST of IVF0025883 vs. NCBI nr
Match: XP_023526462.1 (uncharacterized protein LOC111789953 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 168 bits (425), Expect = 2.47e-51
Identity = 86/107 (80.37%), Postives = 92/107 (85.98%), Query Frame = 0

Query: 19  KESNAKAEKEMEENGGSDGGSNAHWWWAFAGAGQLGWGIASFRRGFVGDSSTMPLKAFAV 78
           +E +   +KEMEENGGSDG SNAHWWWA AGA QLGWGIASFRRG +G+SS MPLKAFAV
Sbjct: 4   REKSETGQKEMEENGGSDGVSNAHWWWALAGATQLGWGIASFRRGLIGNSSLMPLKAFAV 63

Query: 79  ASLFVGAAASSAIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK 125
           ASLFVG  AS AIASLKASGIHKVEDVMEVGA IRSGLGIR R QD+
Sbjct: 64  ASLFVGGGASCAIASLKASGIHKVEDVMEVGASIRSGLGIRPRPQDE 110

BLAST of IVF0025883 vs. TAIR 10
Match: AT3G60480.1 (unknown protein; Has 17 Blast hits to 17 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 96.3 bits (238), Expect = 1.9e-20
Identity = 48/102 (47.06%), Postives = 68/102 (66.67%), Query Frame = 0

Query: 30  EENGGSDGGSNA------HWWWAFAGAGQLGWGIASFRRGFVGDSSTMPLKAFAVASLFV 89
           E+N G+  G ++      HWWWA     Q+ WGI   RRG+ GD   MPLKAF VASLFV
Sbjct: 3   EQNAGTGAGESSLLDGSGHWWWALGSGAQIMWGIRLIRRGYAGDVRLMPLKAFGVASLFV 62

Query: 90  GAAASSAIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK 126
           G+ A+S++A ++A+GIH V+D +++GA IR+ LG+  +  DK
Sbjct: 63  GSLATSSVALVRATGIHTVQDAIDLGANIRTNLGVTPQIPDK 104

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3AUW21.4e-60100.00uncharacterized protein LOC103483131 OS=Cucumis melo OX=3656 GN=LOC103483131 PE=... [more]
A0A0A0L7001.5e-4194.85Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118070 PE=4 SV=1[more]
A0A6J1IIU14.5e-3880.37uncharacterized protein LOC111473617 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1FMU05.9e-3880.37uncharacterized protein LOC111446882 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1E8F93.2e-3679.25uncharacterized protein LOC111431802 OS=Cucurbita moschata OX=3662 GN=LOC1114318... [more]
Match NameE-valueIdentityDescription
XP_008437814.11.29e-81100.00PREDICTED: uncharacterized protein LOC103483131 [Cucumis melo][more]
XP_004133779.11.08e-5694.85uncharacterized protein LOC101221895 [Cucumis sativus] >KGN56372.1 hypothetical ... [more]
XP_022974845.14.68e-5280.37uncharacterized protein LOC111473617 isoform X1 [Cucurbita maxima] >XP_022975308... [more]
XP_022941577.16.64e-5280.37uncharacterized protein LOC111446882 isoform X2 [Cucurbita moschata] >KAG7028515... [more]
XP_023526462.12.47e-5180.37uncharacterized protein LOC111789953 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT3G60480.11.9e-2047.06unknown protein; Has 17 Blast hits to 17 proteins in 8 species: Archae - 0; Bact... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37744STAR LIPID TRANSFER-LIKE PROTEINcoord: 29..123

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0025883.2IVF0025883.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane