IVF0025840 (gene) Melon (IVF77) v1

Overview


Name	IVF0025840
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Gag/pol protein
Location	chr04: 23567188 .. 23571174 (-)
RNA-Seq Expression	IVF0025840
Synteny	IVF0025840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAATAATTATGCATCTTGGAAAAAATACTATCAACACTGTGCTAATCATCGATGACCTTAGATTTGTCCTAGTTGAGGAGTGTCCTCAAGTCCCAGCTGCTAATGCAACTCGAACTGTTCGAGAACCATATGAGCGTTGGGCCAAGGCAAATGAAAAAGCCCGAGCATACATCTTGGCAAGCTTATCTGAAGTATTGGCCAAGAAACATGAATCAATGCTCACTGCTCGTGAGATTATGGACTCCTTGCAGGAGATGTTTGGTCAGGCCTCTTATCAGATCAAGCATGATGCTCTGAAATACATTTATAATGCCCGTATGAATGAGGGAGCCTCAGTGCGAGAACATGTTCTCAATATGATGGTTCATTTCAACGTGGCAGAAATGAATGGGGCTGTCATCGATGAAGCCAGTCAGGTTAGCTTTATTTTGGAATCTCTGCCAGAGAGTTTCCTGCAATTTAGAAGCAATGCTGTTATGAATAAGATTGCTTATACCCTTACCACCCTTCTCAACGAGCTACAGACTTTTGAGTCTCTGATGAAAATCAAGGGACAGAAGGGAGAGGCAAATGTTGCTACTTCCACAAGAAAGTTCCATAGGGGTTCGACCTCAGGAACAAAGTCTATGCCTTCTTCATCTGGCAATAAGAAGTGGAAGAAGAAGAAGGGTGGCCAAGGAAATAAAGCTAACCTCGCTGCTGCTGCTAAAACGACCAAGAAACCAAAGCTGCAAAGGGAATATGTTTCCATTGCAACCAAGAGGGACATTGGAAGAGAAACTGTCCCAAGTACTTGGCAGAAAAGAAGAAGGCTAAACAAGGTAAATATGATTTACTAGTGCTAGAGACTTGTTTAGTGGAAAATGATGATTCAGCCTGGATAATAGATTCAGGTGCCACTAATCATGTTTGTTCTTCATTTCAGGGAATTAGTTCCTGGCGGCAGTTGGAGACTGGAGAGATGACGATGCGAGTTGGAACTGGGCATGTCGTCTCAGCAATTGCAGTGGGAGGGCTTCGACTTTGTTTACAGAAATCTTTTCTTTTATTAGAAAATGTATATGTTGTTCCTGATTTAAAAAGGAATTTGATTTCTGTAAAGTGCTTACTAGAACAATCTTACTCGTTAACTTTTAATGTAAATAAAGTGTTTATTTACAAAAATGGTGTTGAGATTTGTTCTGCAAAGTTAGAAAATAATCTTTATGTGTTAAGATCATTAACATCTAAAGCTCTTCTTAATACTGAAATGTTCAAAACTGCAATAACTCAAAATAAAAGACTTAAAATTTCTCCAAAAGAAAATGCTCATCTTTGGCACCTAAGATTAGGGCATATAATCTCAATAGAATTGAGAGATTAGTAAAGAATGGACTTCTAAGTGAGTTAGAAGAAAATCTTTACCTGTATGTGAGTCATGCCTTGAAGGTAAGATGACCAAAAGACCTTTTACTGGAAAAGGTCATAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTGAAGTTGAAAACGCATTAAGTAAAACTATTAAAACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGGTACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCGTTTTGGGGTTATGCAGTGCAAACTGCAGTCTATATTTTGAATTGTGTTCCATCTAAAAGTGTTTCTGAAACACCTTTAAAATTATGGAATGGTCGTAAAGGTAGTTTACGTCATTTCAGAATTTGGGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTCGTTCAAAATTATGTTTATTTGTAGGCTACCCCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAGAAACTACTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTAACAAGAGTTGTTCATGTCGGTTCATCTACTAGGACACATCAACCTCAATCGTTGAGGGAACCTCGACGAAGTGGGAGGGTTACAAACTTACCTATTCGTTATATGAGTTTAACTGAAACCTTAACTGTCATATCTGATGGCGACATTGAGGATCCATTGACTTTTAAGAAGGCAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCGGTCTGGGATCTTGTAGATCAACCTGATGGGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAGAGGTGCAGATGGTAAGGTACAAACTTTTAAAGCTAGACTAGTGGCAAAGGGTTATACCCAAGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACCTGTTGCCATGTTAAAGTCTATTCGAATACTTTTGTCCATTGCTGCATATTTTGACTATGAGATTTGGCAAATGGATGTAAAGACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAGAATCATCAACAAATCAGTAGCTTTCTTAGTTTTGTACGTAGATGATATCCTACTCATTGGGAATGATATAGGTTTACTAACTGACATCAAACAATGGCTAGCAACCCAATTTCAAATGAAAGATTTGGGAGAGGCACAATTTGTTCTGGGTATTCAGATCTTTAGAGATCGTAAGAACAAAATGCTAGCTTTGTCTCAAGCATCGTATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGAGTTACTTTGTCTAAAGAACAGTGTCCTAAGACACCTCAAGACGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATGTATGCGATGTTATGTACTAGACCTGACATTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCCAGGATTAGCTCATTGGACTGCCGTTAAAACTATCCTCAAGTATCTTAGGAGAACGAGGGACTACACGCTTGTGTATGGTTCTAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACTATGGAGGCAGAGTACGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAATTTCTTGATTGATTTGGAAGTCGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGTGGGGCTGTGGCTAATTCTAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATTGAGCGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGTTGCTGATCCGTTTACAAAGCCCCTCACGGCTAAGGTGTTTGAGGGTCACCTAGAGAGTCTGGGTCTACGTGACATGCCACATTTAACCTAG

mRNA sequence

ATGGCAATAATTATGCATCTTGGAAAAAATACTATCAACACTGTGCTAATCATCGATGACCTTAGATTTGTCCTAGTTGAGGAGTGTCCTCAAGTCCCAGCTGCTAATGCAACTCGAACTGTTCGAGAACCATATGAGCGTTGGGCCAAGGCAAATGAAAAAGCCCGAGCATACATCTTGGCAAGCTTATCTGAAGTATTGGCCAAGAAACATGAATCAATGCTCACTGCTCGTGAGATTATGGACTCCTTGCAGGAGATGTTTGGTCAGGCCTCTTATCAGATCAAGCATGATGCTCTGAAATACATTTATAATGCCCGTATGAATGAGGGAGCCTCAGTGCGAGAACATGTTCTCAATATGATGGTTCATTTCAACGTGGCAGAAATGAATGGGGCTGTCATCGATGAAGCCAGTCAGGTTAGCTTTATTTTGGAATCTCTGCCAGAGAGTTTCCTGCAATTTAGAAGCAATGCTGTTATGAATAAGATTGCTTATACCCTTACCACCCTTCTCAACGAGCTACAGACTTTTGAGTCTCTGATGAAAATCAAGGGACAGAAGGGAGAGGCAAATGTTGCTACTTCCACAAGAAAGTTCCATAGGGGTTCGACCTCAGGAACAAAGTCTATGCCTTCTTCATCTGGCAATAAGAAGTGGAAGAAGAAGAAGGGTGGCCAAGGAAATAAAGCTAACCTCGCTGCTGCTGCTAAAACGACCAAGAAACCAAAGCTGCAAAGGGAATATGTTTCCATTGCAACCAAGAGGGACATTGGAAGAGAAACTGTCCCAAGTACTTGGCAGAAAAGAAGAAGGCTAAACAAGGGAATTAGTTCCTGGCGGCAGTTGGAGACTGGAGAGATGACGATGCGAGTTGGAACTGGGCATGTCGTCTCAGCAATTGCAGTGGGAGGGCTTCGACTTTGTTTACAGAAATCTTTTCTTTTATTAGAAAATGTATATGTTGTTCCTGATTTAAAAAGGAATTTGATTTCTGTAAAAAAATGCTCATCTTTGGCACCTAAGATTAGGGCATATAATCTCAATAGAATTGAGAGATTAGTAAAGAATGGACTTCTAAGTAAGATGACCAAAAGACCTTTTACTGGAAAAGGTCATAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTGAAGTTGAAAACGCATTAAGTAAAACTATTAAAACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGGTACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCGTTTTGGGGTTATGCAGTGCAAACTGCAGTCTATATTTTGAATTGTGTTCCATCTAAAAGTGTTTCTGAAACACCTTTAAAATTATGGAATGGTCGTAAAGGCTACCCCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAGAAACTACTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTAACAAGAGTTGTTCATGTCGGTTCATCTACTAGGACACATCAACCTCAATCGTTGAGGGAACCTCGACGAAGTGGGAGGGTTACAAACTTACCTATTCGTTATATGAGTTTAACTGAAACCTTAACTGTCATATCTGATGGCGACATTGAGGATCCATTGACTTTTAAGAAGGCAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCGGTCTGGGATCTTGTAGATCAACCTGATGGGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAGAGGTGCAGATGGTAAGACTAGTGGCAAAGGGTTATACCCAAGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACCTGTTGCCATGTTAAAGTCTATTCGAATACTTTTGTCCATTGCTGCATATTTTGACTATGAGATTTGGCAAATGGATGTAAAGACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAGAATCATCAACAAATCAGTAGCTTTCTTAGTTTTGTACGTAGATGATATCCTACTCATTGGGAATGATATAGGTTTACTAACTGACATCAAACAATGGCTAGCAACCCAATTTCAAATGAAAGATTTGGGAGAGGCACAATTTGTTCTGGGTATTCAGATCTTTAGAGATCGTAAGAACAAAATGCTAGCTTTGTCTCAAGCATCGTATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGAGTTACTTTGTCTAAAGAACAGTGTCCTAAGACACCTCAAGACGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATTAGATATCAATCTAATCCAGGATTAGCTCATTGGACTGCCGTTAAAACTATCCTCAAGTATCTTAGGAGAACGAGGGACTACACGCTTGTGTATGGTTCTAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACTATGGAGGCAGAGTACGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAATTTCTTGATTGATTTGGAAGTCGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGTGGGGCTGTGGCTAATTCTAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATTGAGCGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGTTGCTGATCCGTTTACAAAGCCCCTCACGGCTAAGGTGTTTGAGGGTCACCTAGAGAGTCTGGGTCTACGTGACATGCCACATTTAACCTAG

Coding sequence (CDS)

ATGGCAATAATTATGCATCTTGGAAAAAATACTATCAACACTGTGCTAATCATCGATGACCTTAGATTTGTCCTAGTTGAGGAGTGTCCTCAAGTCCCAGCTGCTAATGCAACTCGAACTGTTCGAGAACCATATGAGCGTTGGGCCAAGGCAAATGAAAAAGCCCGAGCATACATCTTGGCAAGCTTATCTGAAGTATTGGCCAAGAAACATGAATCAATGCTCACTGCTCGTGAGATTATGGACTCCTTGCAGGAGATGTTTGGTCAGGCCTCTTATCAGATCAAGCATGATGCTCTGAAATACATTTATAATGCCCGTATGAATGAGGGAGCCTCAGTGCGAGAACATGTTCTCAATATGATGGTTCATTTCAACGTGGCAGAAATGAATGGGGCTGTCATCGATGAAGCCAGTCAGGTTAGCTTTATTTTGGAATCTCTGCCAGAGAGTTTCCTGCAATTTAGAAGCAATGCTGTTATGAATAAGATTGCTTATACCCTTACCACCCTTCTCAACGAGCTACAGACTTTTGAGTCTCTGATGAAAATCAAGGGACAGAAGGGAGAGGCAAATGTTGCTACTTCCACAAGAAAGTTCCATAGGGGTTCGACCTCAGGAACAAAGTCTATGCCTTCTTCATCTGGCAATAAGAAGTGGAAGAAGAAGAAGGGTGGCCAAGGAAATAAAGCTAACCTCGCTGCTGCTGCTAAAACGACCAAGAAACCAAAGCTGCAAAGGGAATATGTTTCCATTGCAACCAAGAGGGACATTGGAAGAGAAACTGTCCCAAGTACTTGGCAGAAAAGAAGAAGGCTAAACAAGGGAATTAGTTCCTGGCGGCAGTTGGAGACTGGAGAGATGACGATGCGAGTTGGAACTGGGCATGTCGTCTCAGCAATTGCAGTGGGAGGGCTTCGACTTTGTTTACAGAAATCTTTTCTTTTATTAGAAAATGTATATGTTGTTCCTGATTTAAAAAGGAATTTGATTTCTGTAAAAAAATGCTCATCTTTGGCACCTAAGATTAGGGCATATAATCTCAATAGAATTGAGAGATTAGTAAAGAATGGACTTCTAAGTAAGATGACCAAAAGACCTTTTACTGGAAAAGGTCATAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTGAAGTTGAAAACGCATTAAGTAAAACTATTAAAACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGGTACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCGTTTTGGGGTTATGCAGTGCAAACTGCAGTCTATATTTTGAATTGTGTTCCATCTAAAAGTGTTTCTGAAACACCTTTAAAATTATGGAATGGTCGTAAAGGCTACCCCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAGAAACTACTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTAACAAGAGTTGTTCATGTCGGTTCATCTACTAGGACACATCAACCTCAATCGTTGAGGGAACCTCGACGAAGTGGGAGGGTTACAAACTTACCTATTCGTTATATGAGTTTAACTGAAACCTTAACTGTCATATCTGATGGCGACATTGAGGATCCATTGACTTTTAAGAAGGCAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCGGTCTGGGATCTTGTAGATCAACCTGATGGGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAGAGGTGCAGATGGTAAGACTAGTGGCAAAGGGTTATACCCAAGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACCTGTTGCCATGTTAAAGTCTATTCGAATACTTTTGTCCATTGCTGCATATTTTGACTATGAGATTTGGCAAATGGATGTAAAGACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAGAATCATCAACAAATCAGTAGCTTTCTTAGTTTTGTACGTAGATGATATCCTACTCATTGGGAATGATATAGGTTTACTAACTGACATCAAACAATGGCTAGCAACCCAATTTCAAATGAAAGATTTGGGAGAGGCACAATTTGTTCTGGGTATTCAGATCTTTAGAGATCGTAAGAACAAAATGCTAGCTTTGTCTCAAGCATCGTATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGAGTTACTTTGTCTAAAGAACAGTGTCCTAAGACACCTCAAGACGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATTAGATATCAATCTAATCCAGGATTAGCTCATTGGACTGCCGTTAAAACTATCCTCAAGTATCTTAGGAGAACGAGGGACTACACGCTTGTGTATGGTTCTAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACTATGGAGGCAGAGTACGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAATTTCTTGATTGATTTGGAAGTCGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGTGGGGCTGTGGCTAATTCTAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATTGAGCGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGTTGCTGATCCGTTTACAAAGCCCCTCACGGCTAAGGTGTTTGAGGGTCACCTAGAGAGTCTGGGTCTACGTGACATGCCACATTTAACCTAG

Protein sequence

MAIIMHLGKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAAKTTKKPKLQREYVSIATKRDIGRETVPSTWQKRRRLNKGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKKCSSLAPKIRAYNLNRIERLVKNGLLSKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKEVQMVRLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLIRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT

Homology

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BLAST of IVF0025840 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 1.2e-161
Identity = 334/878 (38.04%), Postives = 490/878 (55.81%), Query Frame = 0


Query: 359  LLSKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQ 418
            L  K  +  F     R    L+LV+SD+CGPM +++ GG +YF+TF DD SR  +VY+++
Sbjct: 461  LFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILK 520

Query: 419  HKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQ 478
             K +  + F+++ A VE    + +K  RSD GGEY   +F+ Y    GI  + + PGTPQ
Sbjct: 521  TKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQ 580

Query: 479  QNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS-ETPLKLWNG 538
             NGV+ER NRT+++ VRSM+  A LP SFWG AVQTA Y++N  PS  ++ E P ++W  
Sbjct: 581  HNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTN 640

Query: 539  RK-----------------------------------GYPKGTRGGYFYDPKDNKVFVST 598
            ++                                   GY     G   +DP   KV  S 
Sbjct: 641  KEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSR 700

Query: 599  NATFLEEDHIREHKPRSKIVLNEL----------------SKETTEPSTRVVEEP----- 658
            +  F  E  +R     S+ V N +                ++ TT+  +   E+P     
Sbjct: 701  DVVF-RESEVRTAADMSEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIE 760

Query: 659  ------SALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIED 718
                    +  V H       HQP      RRS R      RY S TE + +  D    +
Sbjct: 761  QGEQLDEGVEEVEHPTQGEEQHQPL-----RRSERPRVESRRYPS-TEYVLISDD---RE 820

Query: 719  PLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRK---EVQ 778
            P + K+ +   +K++ +KAM  E+ES+  N  + LV+ P G +P+ CKW++K K   + +
Sbjct: 821  PESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCK 880

Query: 779  MV----RLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNG 838
            +V    RLV KG+ Q +G+D++E FSPV  + SIR +LS+AA  D E+ Q+DVKTAFL+G
Sbjct: 881  LVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHG 940

Query: 839  NLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEP 898
            +LEE IYM+QPEGF + G++  +CKLN+S+YGLKQA R W ++FD+ +KS  + +   +P
Sbjct: 941  DLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDP 1000

Query: 899  CVY-KRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIF 958
            CVY KR    +   L+LYVDD+L++G D GL+  +K  L+  F MKDLG AQ +LG++I 
Sbjct: 1001 CVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIV 1060

Query: 959  RDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIP 1018
            R+R ++ L LSQ  YI++++ +++M+N+K    P    + LSK+ CP T ++   M  +P
Sbjct: 1061 RERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVP 1120

Query: 1019 YASAVGSLI------------------RYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGS 1078
            Y+SAVGSL+                  R+  NPG  HW AVK IL+YLR T    L +G 
Sbjct: 1121 YSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGG 1180

Query: 1079 KDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEA 1138
             D IL GYTD+D   D D+RKS++G +FT +GGA+ W+S  Q C+A ST EAEY+AA E 
Sbjct: 1181 SDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATET 1240

Query: 1139 AKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIV 1148
             KE +WL+ FL +L +     K   +YCD+  A+  S+    H R KHI+ +YH IRE+V
Sbjct: 1241 GKEMIWLKRFLQELGL---HQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMV 1300

[Close]

BLAST of IVF0025840 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 396.4 bits (1017), Expect = 1.1e-108
Identity = 288/980 (29.39%), Postives = 461/980 (47.04%), Query Frame = 0


Query: 330  LISVKKCSSLAPKIRAYNLNRIERLVKNGLLSKMTKRPF---TGKGHRAKEPLELVHSDL 389
            L+ +K+ +  + +    NL     + +  L  K  + PF     K H  K PL +VHSD+
Sbjct: 430  LLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQARLPFKQLKDKTH-IKRPLFVVHSDV 489

Query: 390  CGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFR 449
            CGP+         YF+ F D ++ Y   YL+++KS+    F+++ A+ E   +  +    
Sbjct: 490  CGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLY 549

Query: 450  SDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNS 509
             D G EY+  + + + ++ GI   L+ P TPQ NGVSER  RT+ +  R+M+S A L  S
Sbjct: 550  IDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKS 609

Query: 510  FWGYAVQTAVYILNCVPSKSV---SETPLKLWNGRKGYPKGTR-------------GGYF 569
            FWG AV TA Y++N +PS+++   S+TP ++W+ +K Y K  R              G F
Sbjct: 610  FWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKF 669

Query: 570  YD---------------------------------------------------------- 629
             D                                                          
Sbjct: 670  DDKSFKSIFVGYEPNGFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESE 729

Query: 630  ----PKDNKVFVST----------NATFLEEDHIREHK----PRSKIVLNELS------- 689
                P D++  + T          N  FL++    E+K       KI+  E         
Sbjct: 730  NKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECD 789

Query: 690  -----KETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREP----------------- 749
                 K++ E +   + E     R  H+  S  +  P   RE                  
Sbjct: 790  NIQFLKDSKESNKYFLNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKN 849

Query: 750  -------RRSGRVTNLP-IRYMSLTETL--TVISDGDI--EDPLTFKKAMEDVDKDEWIK 809
                   RRS R+   P I Y     +L   V++   I  + P +F +     DK  W +
Sbjct: 850  DGIEIINRRSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEE 909

Query: 810  AMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKEVQM-------VRLVAKGYTQVEG 869
            A+N EL +   N+ W +  +P+    +  +W++  K  ++        RLVA+G+TQ   
Sbjct: 910  AINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQ 969

Query: 870  VDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPG 929
            +DYEETF+PVA + S R +LS+   ++ ++ QMDVKTAFLNG L+E IYM+ P+G  I  
Sbjct: 970  IDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQG--ISC 1029

Query: 930  QEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVY---KRIINKSVAFLV 989
                +CKLN++IYGLKQA+R W   F+ A+K   F     + C+Y   K  IN+++ +++
Sbjct: 1030 NSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENI-YVL 1089

Query: 990  LYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYI 1049
            LYVDD+++   D+  + + K++L  +F+M DL E +  +GI+I  + +   + LSQ++Y+
Sbjct: 1090 LYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRI--EMQEDKIYLSQSAYV 1149

Query: 1050 DKIVVKYSMQNSKRGLLPFRHGVT---LSKEQCPKTP--------QDVEEMRHIPYASAV 1109
             KI+ K++M+N      P    +    L+ ++   TP          +         +AV
Sbjct: 1150 KKILSKFNMENCNAVSTPLPSKINYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAV 1209

Query: 1110 GSLIRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLI----LTGYTDSDFQTDRDS 1148
              L RY S      W  +K +L+YL+ T D  L++  K+L     + GY DSD+      
Sbjct: 1210 NILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIF-KKNLAFENKIIGYVDSDWAGSEID 1269

[Close]

BLAST of IVF0025840 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 2.4e-90
Identity = 267/971 (27.50%), Postives = 421/971 (43.36%), Query Frame = 0


Query: 359  LLSKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQ 418
            L++K  K PF+     +  PLE ++SD+     + +   + Y++ F D ++RY ++Y ++
Sbjct: 504  LINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLK 563

Query: 419  HKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQ 478
             KS+  E F  +K  +EN     I TF SD GGE++ L    Y  + GI    S P TP+
Sbjct: 564  QKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVAL--WEYFSQHGISHLTSPPHTPE 623

Query: 479  QNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS-ETPL-KLWN 538
             NG+SER++R +++   +++S+A +P ++W YA   AVY++N +P+  +  E+P  KL+ 
Sbjct: 624  HNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFG 683

Query: 539  GRKGYPK---------------------------------GTRGGYF-YDPKDNKVFVST 598
                Y K                                  T+  Y     + +++++S 
Sbjct: 684  TSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISR 743

Query: 599  NATFLEE-----------DHIREHKPRSKIVLNELSKETTEPSTRVV------------- 658
            +  F E              ++E +  S  V    S  TT P+   V             
Sbjct: 744  HVRFDENCFPFSNYLATLSPVQEQRRESSCV---WSPHTTLPTRTPVLPAPSCSDPHHAA 803

Query: 659  ---EEPSALTRVVHVGSS----------------------------------TRTHQ--- 718
                 PSA  R   V SS                                  T+TH    
Sbjct: 804  TPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQN 863

Query: 719  --------------PQSLREPRRSGRVTNLPIRYMSLTET--------------LTVISD 778
                           QSL  P +S   +  P    S + T              L  I +
Sbjct: 864  TSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVN 923

Query: 779  GDIEDPLTF------------------------------KKAMEDVDKDEWIKAMNLELE 838
             + + PL                                + A++ +  + W  AM  E+ 
Sbjct: 924  NNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEIN 983

Query: 839  SMYFNSVWDLVDQPDG-VKPIGCKWIYKRK-------EVQMVRLVAKGYTQVEGVDYEET 898
            +   N  WDLV  P   V  +GC+WI+ +K            RLVAKGY Q  G+DY ET
Sbjct: 984  AQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAET 1043

Query: 899  FSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKIC 958
            FSPV    SIRI+L +A    + I Q+DV  AFL G L + +YM QP GFI   +   +C
Sbjct: 1044 FSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVC 1103

Query: 959  KLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLI 1018
            KL +++YGLKQA R+W +     + + GF   V +  ++     KS+ ++++YVDDIL+ 
Sbjct: 1104 KLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILIT 1163

Query: 1019 GNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSM 1078
            GND  LL +    L+ +F +KD  E  + LGI+    R    L LSQ  YI  ++ + +M
Sbjct: 1164 GNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIE--AKRVPTGLHLSQRRYILDLLARTNM 1223

Query: 1079 QNSKRGLLPFRHGVTLSKEQCPKTPQDVE------EMRHIPY-----ASAVGSLIRYQSN 1138
              +K    P      LS     K     E       ++++ +     + AV  L ++   
Sbjct: 1224 ITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHM 1283

Query: 1139 PGLAHWTAVKTILKYLRRTRDYTL-VYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLN 1152
            P   H  A+K IL+YL  T ++ + +     L L  Y+D+D+  D+D   ST+G +  L 
Sbjct: 1284 PTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLG 1343

[Close]

BLAST of IVF0025840 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 3.4e-89
Identity = 262/974 (26.90%), Postives = 422/974 (43.33%), Query Frame = 0


Query: 360  LSKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQH 419
            ++K  K PF+     + +PLE ++SD+     + +   + Y++ F D ++RY ++Y ++ 
Sbjct: 484  INKSHKVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQ 543

Query: 420  KSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQ 479
            KS+  + F  +K+ VEN     I T  SD GGE++ L+  +YL + GI    S P TP+ 
Sbjct: 544  KSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLR--DYLSQHGISHFTSPPHTPEH 603

Query: 480  NGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS-ETPL-KLWNG 539
            NG+SER++R +++M  +++S+A +P ++W YA   AVY++N +P+  +  ++P  KL+  
Sbjct: 604  NGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQ 663

Query: 540  RKGYPKGTRGGYFYDP-----------KDNKVFVSTNATFLEEDHIREHKPRSKIVLN-- 599
               Y K    G    P             +K       +  +  ++  H P  ++  +  
Sbjct: 664  PPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRH 723

Query: 600  -----------------ELSKE------------TTEPSTRVV----------------- 659
                               S+E            TT P+T +V                 
Sbjct: 724  VQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRP 783

Query: 660  -EEPSAL-----------------------TRVVHVG--SSTRTHQPQ------------ 719
               PS L                       T   H G   + + HQ Q            
Sbjct: 784  PSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNP 843

Query: 720  -----SLREPRRSGRVTNLPIRYMSLTETLTVISDGDI---------------------- 779
                 S   P ++  +   PI    +    T IS+ +                       
Sbjct: 844  NPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQ 903

Query: 780  ------------------------------------EDPLTFKKAMEDVDKDEWIKAMNL 839
                                                 +P T  +AM+D   D W +AM  
Sbjct: 904  VNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAANSEPRTAIQAMKD---DRWRQAMGS 963

Query: 840  ELESMYFNSVWDLV-DQPDGVKPIGCKWIYKRK-------EVQMVRLVAKGYTQVEGVDY 899
            E+ +   N  WDLV   P  V  +GC+WI+ +K            RLVAKGY Q  G+DY
Sbjct: 964  EINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDY 1023

Query: 900  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 959
             ETFSPV    SIRI+L +A    + I Q+DV  AFL G L + +YM QP GF+   +  
Sbjct: 1024 AETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPD 1083

Query: 960  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1019
             +C+L ++IYGLKQA R+W +   T + + GF   + +  ++     +S+ ++++YVDDI
Sbjct: 1084 YVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDI 1143

Query: 1020 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1079
            L+ GND  LL      L+ +F +K+  +  + LGI+    R  + L LSQ  Y   ++ +
Sbjct: 1144 LITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIE--AKRVPQGLHLSQRRYTLDLLAR 1203

Query: 1080 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVE------EMRHIPY-----ASAVGSLIRY 1139
             +M  +K    P      L+     K P   E       ++++ +     + AV  L +Y
Sbjct: 1204 TNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQY 1263

Query: 1140 QSNPGLAHWTAVKTILKYLRRTRDYTL-VYGSKDLILTGYTDSDFQTDRDSRKSTSGSVF 1152
               P   HW A+K +L+YL  T D+ + +     L L  Y+D+D+  D D   ST+G + 
Sbjct: 1264 MHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIV 1323

[Close]

BLAST of IVF0025840 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 134.8 bits (338), Expect = 6.2e-30
Identity = 99/314 (31.53%), Postives = 140/314 (44.59%), Query Frame = 0


Query: 759  MDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKS 818
            MDV TAFLN  ++E IY++QP GF+       + +L   +YGLKQA   WN   +  +K 
Sbjct: 1    MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 819  YGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEA 878
             GF +   E  +Y R  +    ++ +YVDD+L+      +   +KQ L   + MKDLG+ 
Sbjct: 61   IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 879  QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQ 938
               LG+ I +   N  + LS   YI K   +  +   K    P  +   L +   P   +
Sbjct: 121  DKFLGLNIHQS-SNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHL-K 180

Query: 939  DVEEMRHIPYASAVGSLI------------------RYQSNPGLAHWTAVKTILKYLRRT 998
            D+      PY S VG L+                  R+   P   H  + + +L+YL  T
Sbjct: 181  DI-----TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTT 240

Query: 999  RDYTLVYGS-KDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIK-QGCIADST 1053
            R   L Y S   L LT Y D+      D   ST G V  L G  V W S K +G I   +
Sbjct: 241  RSMCLKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPS 300

[Close]

BLAST of IVF0025840 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 2070.0 bits (5362), Expect = 0.0e+00
Identity = 1105/1322 (83.59%), Postives = 1116/1322 (84.42%), Query Frame = 0


Query: 9    KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 68
            KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA
Sbjct: 23   KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 82

Query: 69   KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 128
            KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA
Sbjct: 83   KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 142

Query: 129  EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 188
            EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK
Sbjct: 143  EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 202

Query: 189  GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAAKTTKKPKLQR- 248
            GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANL AAAKTTKK K  + 
Sbjct: 203  GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANL-AAAKTTKKAKAAKG 262

Query: 249  ----------------EYVSIATKRDIGR-----------ETVPSTWQKRRRLN------ 308
                            +Y++   K   G+           E   S W             
Sbjct: 263  ICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSS 322

Query: 309  -KGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV 368
             +GISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV
Sbjct: 323  FQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV 382

Query: 369  K----------------------------------------------------------K 428
            K                                                          K
Sbjct: 383  KCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNK 442

Query: 429  CSSLAPKIRAY---------NLNRIERLVKNGLLS----------------KMTKRPFTG 488
               ++PK  A+         NLNRIERLVKNGLLS                KMTKRPFTG
Sbjct: 443  RLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTG 502

Query: 489  KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY 548
            KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY
Sbjct: 503  KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY 562

Query: 549  KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL 608
            KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL
Sbjct: 563  KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL 622

Query: 609  LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRK----------- 668
            LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRK           
Sbjct: 623  LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGC 682

Query: 669  ----------------------GYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP 728
                                  GYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP
Sbjct: 683  PAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP 742

Query: 729  RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR 788
            RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR
Sbjct: 743  RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR 802

Query: 789  YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV 848
            YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV
Sbjct: 803  YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV 862

Query: 849  KPIGCKWIYKRK-------EVQMVRLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA 908
            KPIGCKWIYKRK       +    RLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA
Sbjct: 863  KPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA 922

Query: 909  YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI 968
            YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI
Sbjct: 923  YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI 982

Query: 969  RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF 1028
            RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF
Sbjct: 983  RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF 1042

Query: 1029 QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK 1088
            QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK
Sbjct: 1043 QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK 1102

Query: 1089 EQCPKTPQDVEEMRHIPYASAVGSLI------------------RYQSNPGLAHWTAVKT 1148
            EQCPKTPQDVEEMRHIPYASAVGSL+                  RYQSNPGLAHWTAVKT
Sbjct: 1103 EQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKT 1162

Query: 1149 ILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQG 1155
            ILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQG
Sbjct: 1163 ILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQG 1222

[Close]

BLAST of IVF0025840 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 2070.0 bits (5362), Expect = 0.0e+00
Identity = 1105/1322 (83.59%), Postives = 1116/1322 (84.42%), Query Frame = 0


Query: 9    KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 68
            KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA
Sbjct: 23   KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 82

Query: 69   KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 128
            KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA
Sbjct: 83   KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 142

Query: 129  EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 188
            EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK
Sbjct: 143  EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 202

Query: 189  GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAAKTTKKPKLQR- 248
            GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANL AAAKTTKK K  + 
Sbjct: 203  GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANL-AAAKTTKKTKAAKG 262

Query: 249  ----------------EYVSIATKRDIGR-----------ETVPSTWQKRRRLN------ 308
                            +Y++   K   G+           E   S W             
Sbjct: 263  ICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSS 322

Query: 309  -KGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV 368
             +GISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV
Sbjct: 323  FQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV 382

Query: 369  K----------------------------------------------------------K 428
            K                                                          K
Sbjct: 383  KCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNK 442

Query: 429  CSSLAPKIRAY---------NLNRIERLVKNGLLS----------------KMTKRPFTG 488
               ++PK  A+         NLNRIERLVKNGLLS                KMTKRPFTG
Sbjct: 443  RLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTG 502

Query: 489  KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY 548
            KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY
Sbjct: 503  KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY 562

Query: 549  KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL 608
            KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL
Sbjct: 563  KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL 622

Query: 609  LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRK----------- 668
            LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRK           
Sbjct: 623  LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGC 682

Query: 669  ----------------------GYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP 728
                                  GYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP
Sbjct: 683  PAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP 742

Query: 729  RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR 788
            RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR
Sbjct: 743  RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR 802

Query: 789  YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV 848
            YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV
Sbjct: 803  YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV 862

Query: 849  KPIGCKWIYKRK-------EVQMVRLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA 908
            KPIGCKWIYKRK       +    RLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA
Sbjct: 863  KPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA 922

Query: 909  YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI 968
            YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI
Sbjct: 923  YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI 982

Query: 969  RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF 1028
            RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF
Sbjct: 983  RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF 1042

Query: 1029 QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK 1088
            QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK
Sbjct: 1043 QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK 1102

Query: 1089 EQCPKTPQDVEEMRHIPYASAVGSLI------------------RYQSNPGLAHWTAVKT 1148
            EQCPKTPQDVEEMRHIPYASAVGSL+                  RYQSNPGLAHWTAVKT
Sbjct: 1103 EQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKT 1162

Query: 1149 ILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQG 1155
            ILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQG
Sbjct: 1163 ILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQG 1222

[Close]

BLAST of IVF0025840 vs. ExPASy TrEMBL
Match: A0A5A7TZD7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G001300 PE=4 SV=1)

HSP 1 Score: 2064.3 bits (5347), Expect = 0.0e+00
Identity = 1104/1322 (83.51%), Postives = 1115/1322 (84.34%), Query Frame = 0


Query: 9    KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 68
            KNT NTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA
Sbjct: 23   KNT-NTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 82

Query: 69   KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 128
            KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA
Sbjct: 83   KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 142

Query: 129  EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 188
            EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK
Sbjct: 143  EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 202

Query: 189  GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAAKTTKKPKLQR- 248
            GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANL AAAKTTKK K  + 
Sbjct: 203  GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANL-AAAKTTKKAKAAKG 262

Query: 249  ----------------EYVSIATKRDIGR-----------ETVPSTWQKRRRLN------ 308
                            +Y++   K   G+           E   S W             
Sbjct: 263  ICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSS 322

Query: 309  -KGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV 368
             +GISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV
Sbjct: 323  FQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV 382

Query: 369  K----------------------------------------------------------K 428
            K                                                          K
Sbjct: 383  KCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNK 442

Query: 429  CSSLAPKIRAY---------NLNRIERLVKNGLLS----------------KMTKRPFTG 488
               ++PK  A+         NLNRIERLVKNGLLS                KMTKRPFTG
Sbjct: 443  RLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTG 502

Query: 489  KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY 548
            KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY
Sbjct: 503  KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY 562

Query: 549  KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL 608
            KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL
Sbjct: 563  KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL 622

Query: 609  LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRK----------- 668
            LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRK           
Sbjct: 623  LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGC 682

Query: 669  ----------------------GYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP 728
                                  GYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP
Sbjct: 683  PAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP 742

Query: 729  RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR 788
            RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR
Sbjct: 743  RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR 802

Query: 789  YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV 848
            YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV
Sbjct: 803  YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV 862

Query: 849  KPIGCKWIYKRK-------EVQMVRLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA 908
            KPIGCKWIYKRK       +    RLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA
Sbjct: 863  KPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA 922

Query: 909  YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI 968
            YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI
Sbjct: 923  YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI 982

Query: 969  RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF 1028
            RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF
Sbjct: 983  RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF 1042

Query: 1029 QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK 1088
            QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK
Sbjct: 1043 QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK 1102

Query: 1089 EQCPKTPQDVEEMRHIPYASAVGSLI------------------RYQSNPGLAHWTAVKT 1148
            EQCPKTPQDVEEMRHIPYASAVGSL+                  RYQSNPGLAHWTAVKT
Sbjct: 1103 EQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKT 1162

Query: 1149 ILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQG 1155
            ILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQG
Sbjct: 1163 ILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQG 1222

[Close]

BLAST of IVF0025840 vs. ExPASy TrEMBL
Match: A0A5D3CSZ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00320 PE=4 SV=1)

HSP 1 Score: 2031.9 bits (5263), Expect = 0.0e+00
Identity = 1087/1304 (83.36%), Postives = 1098/1304 (84.20%), Query Frame = 0


Query: 9    KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 68
            KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA
Sbjct: 23   KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 82

Query: 69   KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 128
            KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA
Sbjct: 83   KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 142

Query: 129  EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 188
            EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK
Sbjct: 143  EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 202

Query: 189  GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAAKTTKKPKLQR- 248
            GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANL AAAKTTKK K  + 
Sbjct: 203  GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANL-AAAKTTKKTKAAKG 262

Query: 249  ----------------EYVSIATKRDIGR-----------ETVPSTWQKRRRLN------ 308
                            +Y++   K   G+           E   S W             
Sbjct: 263  ICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSS 322

Query: 309  -KGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV 368
             +GISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV
Sbjct: 323  FQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV 382

Query: 369  K----------------------------------------------------------K 428
            K                                                          K
Sbjct: 383  KCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNK 442

Query: 429  CSSLAPKIRAY---------NLNRIERLVKNGLLS----------------KMTKRPFTG 488
               ++PK  A+         NLNRIERLVKNGLLS                KMTKRPFTG
Sbjct: 443  RLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTG 502

Query: 489  KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY 548
            KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY
Sbjct: 503  KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY 562

Query: 549  KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL 608
            KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL
Sbjct: 563  KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL 622

Query: 609  LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRK----------- 668
            LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRK           
Sbjct: 623  LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGC 682

Query: 669  ----------------------GYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP 728
                                  GYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP
Sbjct: 683  PAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP 742

Query: 729  RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR 788
            RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR
Sbjct: 743  RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR 802

Query: 789  YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV 848
            YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV
Sbjct: 803  YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV 862

Query: 849  KPIGCKWIYKRK-------EVQMVRLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA 908
            KPIGCKWIYKRK       +    RLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA
Sbjct: 863  KPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA 922

Query: 909  YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI 968
            YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI
Sbjct: 923  YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI 982

Query: 969  RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF 1028
            RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF
Sbjct: 983  RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF 1042

Query: 1029 QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK 1088
            QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK
Sbjct: 1043 QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK 1102

Query: 1089 EQCPKTPQDVEEMRHIPYASAVGSLI------------------RYQSNPGLAHWTAVKT 1137
            EQCPKTPQDVEEMRHIPYASAVGSL+                  RYQSNPGLAHWTAVKT
Sbjct: 1103 EQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKT 1162

[Close]

BLAST of IVF0025840 vs. ExPASy TrEMBL
Match: A0A5A7UGV2 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G002690 PE=4 SV=1)

HSP 1 Score: 2031.9 bits (5263), Expect = 0.0e+00
Identity = 1087/1304 (83.36%), Postives = 1098/1304 (84.20%), Query Frame = 0


Query: 9    KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 68
            KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA
Sbjct: 23   KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 82

Query: 69   KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 128
            KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA
Sbjct: 83   KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 142

Query: 129  EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 188
            EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK
Sbjct: 143  EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 202

Query: 189  GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAAKTTKKPKLQR- 248
            GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANL AAAKTTKK K  + 
Sbjct: 203  GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANL-AAAKTTKKAKAAKG 262

Query: 249  ----------------EYVSIATKRDIGR-----------ETVPSTWQKRRRLN------ 308
                            +Y++   K   G+           E   S W             
Sbjct: 263  ICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSS 322

Query: 309  -KGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV 368
             +GISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV
Sbjct: 323  FQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV 382

Query: 369  K----------------------------------------------------------K 428
            K                                                          K
Sbjct: 383  KCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNK 442

Query: 429  CSSLAPKIRAY---------NLNRIERLVKNGLLS----------------KMTKRPFTG 488
               ++PK  A+         NLNRIERLVKNGLLS                KMTKRPFTG
Sbjct: 443  RLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTG 502

Query: 489  KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY 548
            KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY
Sbjct: 503  KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY 562

Query: 549  KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL 608
            KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL
Sbjct: 563  KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL 622

Query: 609  LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRK----------- 668
            LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRK           
Sbjct: 623  LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGC 682

Query: 669  ----------------------GYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP 728
                                  GYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP
Sbjct: 683  PAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP 742

Query: 729  RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR 788
            RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR
Sbjct: 743  RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR 802

Query: 789  YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV 848
            YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV
Sbjct: 803  YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV 862

Query: 849  KPIGCKWIYKRK-------EVQMVRLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA 908
            KPIGCKWIYKRK       +    RLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA
Sbjct: 863  KPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA 922

Query: 909  YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI 968
            YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI
Sbjct: 923  YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI 982

Query: 969  RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF 1028
            RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF
Sbjct: 983  RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF 1042

Query: 1029 QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK 1088
            QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK
Sbjct: 1043 QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK 1102

Query: 1089 EQCPKTPQDVEEMRHIPYASAVGSLI------------------RYQSNPGLAHWTAVKT 1137
            EQCPKTPQDVEEMRHIPYASAVGSL+                  RYQSNPGLAHWTAVKT
Sbjct: 1103 EQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKT 1162

[Close]

BLAST of IVF0025840 vs. NCBI nr
Match: KAA0035879.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051221.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051893.1 gag/pol protein [Cucumis melo var. makuwa] >TYK00551.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2063 bits (5345), Expect = 0.0
Identity = 1103/1322 (83.43%), Postives = 1117/1322 (84.49%), Query Frame = 0


Query: 9    KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 68
            KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA
Sbjct: 23   KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 82

Query: 69   KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 128
            KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA
Sbjct: 83   KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 142

Query: 129  EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 188
            EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK
Sbjct: 143  EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 202

Query: 189  GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAAKTTKKPKLQRE 248
            GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAA KTTKK K  + 
Sbjct: 203  GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAA-KTTKKTKAAKG 262

Query: 249  YVSIATKRDIGRETVPSTWQKRRRLNKG-------------------------------- 308
                  +    +   P    ++++  +G                                
Sbjct: 263  ICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSS 322

Query: 309  ---ISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV 368
               ISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV
Sbjct: 323  FQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV 382

Query: 369  KK------------------------CSS------------------------------- 428
            K                         CS+                               
Sbjct: 383  KCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNK 442

Query: 429  ---LAPKIRAY---------NLNRIERLVKNGLLS----------------KMTKRPFTG 488
               ++PK  A+         NLNRIERLVKNGLLS                KMTKRPFTG
Sbjct: 443  RLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTG 502

Query: 489  KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY 548
            KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY
Sbjct: 503  KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY 562

Query: 549  KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL 608
            KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL
Sbjct: 563  KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL 622

Query: 609  LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKG---------- 668
            LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKG          
Sbjct: 623  LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGC 682

Query: 669  -----------------------YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP 728
                                   YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP
Sbjct: 683  PAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP 742

Query: 729  RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR 788
            RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR
Sbjct: 743  RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR 802

Query: 789  YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV 848
            YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV
Sbjct: 803  YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV 862

Query: 849  KPIGCKWIYKRK-----EVQM--VRLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA 908
            KPIGCKWIYKRK     +VQ    RLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA
Sbjct: 863  KPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA 922

Query: 909  YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI 968
            YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI
Sbjct: 923  YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI 982

Query: 969  RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF 1028
            RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF
Sbjct: 983  RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF 1042

Query: 1029 QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK 1088
            QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK
Sbjct: 1043 QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK 1102

Query: 1089 EQCPKTPQDVEEMRHIPYASAVGSLI------------------RYQSNPGLAHWTAVKT 1148
            EQCPKTPQDVEEMRHIPYASAVGSL+                  RYQSNPGLAHWTAVKT
Sbjct: 1103 EQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKT 1162

Query: 1149 ILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQG 1154
            ILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQG
Sbjct: 1163 ILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQG 1222

[Close]

BLAST of IVF0025840 vs. NCBI nr
Match: KAA0031826.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0032384.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0039313.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0043789.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0048789.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2063 bits (5345), Expect = 0.0
Identity = 1103/1322 (83.43%), Postives = 1117/1322 (84.49%), Query Frame = 0


Query: 9    KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 68
            KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA
Sbjct: 23   KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 82

Query: 69   KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 128
            KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA
Sbjct: 83   KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 142

Query: 129  EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 188
            EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK
Sbjct: 143  EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 202

Query: 189  GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAAKTTKKPKLQRE 248
            GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAA KTTKK K  + 
Sbjct: 203  GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAA-KTTKKAKAAKG 262

Query: 249  YVSIATKRDIGRETVPSTWQKRRRLNKG-------------------------------- 308
                  +    +   P    ++++  +G                                
Sbjct: 263  ICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSS 322

Query: 309  ---ISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV 368
               ISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV
Sbjct: 323  FQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV 382

Query: 369  KK------------------------CSS------------------------------- 428
            K                         CS+                               
Sbjct: 383  KCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNK 442

Query: 429  ---LAPKIRAY---------NLNRIERLVKNGLLS----------------KMTKRPFTG 488
               ++PK  A+         NLNRIERLVKNGLLS                KMTKRPFTG
Sbjct: 443  RLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTG 502

Query: 489  KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY 548
            KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY
Sbjct: 503  KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY 562

Query: 549  KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL 608
            KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL
Sbjct: 563  KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL 622

Query: 609  LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKG---------- 668
            LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKG          
Sbjct: 623  LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGC 682

Query: 669  -----------------------YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP 728
                                   YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP
Sbjct: 683  PAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP 742

Query: 729  RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR 788
            RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR
Sbjct: 743  RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR 802

Query: 789  YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV 848
            YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV
Sbjct: 803  YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV 862

Query: 849  KPIGCKWIYKRK-----EVQM--VRLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA 908
            KPIGCKWIYKRK     +VQ    RLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA
Sbjct: 863  KPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA 922

Query: 909  YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI 968
            YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI
Sbjct: 923  YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI 982

Query: 969  RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF 1028
            RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF
Sbjct: 983  RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF 1042

Query: 1029 QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK 1088
            QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK
Sbjct: 1043 QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK 1102

Query: 1089 EQCPKTPQDVEEMRHIPYASAVGSLI------------------RYQSNPGLAHWTAVKT 1148
            EQCPKTPQDVEEMRHIPYASAVGSL+                  RYQSNPGLAHWTAVKT
Sbjct: 1103 EQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKT 1162

Query: 1149 ILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQG 1154
            ILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQG
Sbjct: 1163 ILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQG 1222

[Close]

BLAST of IVF0025840 vs. NCBI nr
Match: KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2057 bits (5330), Expect = 0.0
Identity = 1102/1322 (83.36%), Postives = 1116/1322 (84.42%), Query Frame = 0


Query: 9    KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 68
            KNT NTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA
Sbjct: 23   KNT-NTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 82

Query: 69   KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 128
            KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA
Sbjct: 83   KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 142

Query: 129  EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 188
            EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK
Sbjct: 143  EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 202

Query: 189  GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAAKTTKKPKLQRE 248
            GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAA KTTKK K  + 
Sbjct: 203  GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAA-KTTKKAKAAKG 262

Query: 249  YVSIATKRDIGRETVPSTWQKRRRLNKG-------------------------------- 308
                  +    +   P    ++++  +G                                
Sbjct: 263  ICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSS 322

Query: 309  ---ISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV 368
               ISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV
Sbjct: 323  FQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV 382

Query: 369  KK------------------------CSS------------------------------- 428
            K                         CS+                               
Sbjct: 383  KCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNK 442

Query: 429  ---LAPKIRAY---------NLNRIERLVKNGLLS----------------KMTKRPFTG 488
               ++PK  A+         NLNRIERLVKNGLLS                KMTKRPFTG
Sbjct: 443  RLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTG 502

Query: 489  KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY 548
            KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY
Sbjct: 503  KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY 562

Query: 549  KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL 608
            KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL
Sbjct: 563  KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL 622

Query: 609  LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKG---------- 668
            LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKG          
Sbjct: 623  LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGC 682

Query: 669  -----------------------YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP 728
                                   YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP
Sbjct: 683  PAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP 742

Query: 729  RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR 788
            RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR
Sbjct: 743  RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR 802

Query: 789  YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV 848
            YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV
Sbjct: 803  YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV 862

Query: 849  KPIGCKWIYKRK-----EVQM--VRLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA 908
            KPIGCKWIYKRK     +VQ    RLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA
Sbjct: 863  KPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA 922

Query: 909  YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI 968
            YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI
Sbjct: 923  YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI 982

Query: 969  RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF 1028
            RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF
Sbjct: 983  RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF 1042

Query: 1029 QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK 1088
            QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK
Sbjct: 1043 QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK 1102

Query: 1089 EQCPKTPQDVEEMRHIPYASAVGSLI------------------RYQSNPGLAHWTAVKT 1148
            EQCPKTPQDVEEMRHIPYASAVGSL+                  RYQSNPGLAHWTAVKT
Sbjct: 1103 EQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKT 1162

Query: 1149 ILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQG 1154
            ILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQG
Sbjct: 1163 ILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQG 1222

[Close]

BLAST of IVF0025840 vs. NCBI nr
Match: TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2026 bits (5248), Expect = 0.0
Identity = 1085/1304 (83.21%), Postives = 1099/1304 (84.28%), Query Frame = 0


Query: 9    KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 68
            KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA
Sbjct: 23   KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 82

Query: 69   KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 128
            KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA
Sbjct: 83   KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 142

Query: 129  EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 188
            EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK
Sbjct: 143  EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 202

Query: 189  GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAAKTTKKPKLQRE 248
            GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAA KTTKK K  + 
Sbjct: 203  GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAA-KTTKKTKAAKG 262

Query: 249  YVSIATKRDIGRETVPSTWQKRRRLNKG-------------------------------- 308
                  +    +   P    ++++  +G                                
Sbjct: 263  ICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSS 322

Query: 309  ---ISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV 368
               ISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV
Sbjct: 323  FQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV 382

Query: 369  KK------------------------CSS------------------------------- 428
            K                         CS+                               
Sbjct: 383  KCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNK 442

Query: 429  ---LAPKIRAY---------NLNRIERLVKNGLLS----------------KMTKRPFTG 488
               ++PK  A+         NLNRIERLVKNGLLS                KMTKRPFTG
Sbjct: 443  RLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTG 502

Query: 489  KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY 548
            KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY
Sbjct: 503  KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY 562

Query: 549  KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL 608
            KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL
Sbjct: 563  KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL 622

Query: 609  LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKG---------- 668
            LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKG          
Sbjct: 623  LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGC 682

Query: 669  -----------------------YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP 728
                                   YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP
Sbjct: 683  PAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP 742

Query: 729  RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR 788
            RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR
Sbjct: 743  RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR 802

Query: 789  YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV 848
            YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV
Sbjct: 803  YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV 862

Query: 849  KPIGCKWIYKRK-----EVQM--VRLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA 908
            KPIGCKWIYKRK     +VQ    RLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA
Sbjct: 863  KPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA 922

Query: 909  YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI 968
            YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI
Sbjct: 923  YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI 982

Query: 969  RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF 1028
            RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF
Sbjct: 983  RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF 1042

Query: 1029 QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK 1088
            QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK
Sbjct: 1043 QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK 1102

Query: 1089 EQCPKTPQDVEEMRHIPYASAVGSLI------------------RYQSNPGLAHWTAVKT 1136
            EQCPKTPQDVEEMRHIPYASAVGSL+                  RYQSNPGLAHWTAVKT
Sbjct: 1103 EQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKT 1162

[Close]

BLAST of IVF0025840 vs. NCBI nr
Match: KAA0054490.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2026 bits (5248), Expect = 0.0
Identity = 1085/1304 (83.21%), Postives = 1099/1304 (84.28%), Query Frame = 0


Query: 9    KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 68
            KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA
Sbjct: 23   KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 82

Query: 69   KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 128
            KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA
Sbjct: 83   KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 142

Query: 129  EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 188
            EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK
Sbjct: 143  EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 202

Query: 189  GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAAKTTKKPKLQRE 248
            GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAA KTTKK K  + 
Sbjct: 203  GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAA-KTTKKAKAAKG 262

Query: 249  YVSIATKRDIGRETVPSTWQKRRRLNKG-------------------------------- 308
                  +    +   P    ++++  +G                                
Sbjct: 263  ICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSS 322

Query: 309  ---ISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV 368
               ISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV
Sbjct: 323  FQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV 382

Query: 369  KK------------------------CSS------------------------------- 428
            K                         CS+                               
Sbjct: 383  KCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNK 442

Query: 429  ---LAPKIRAY---------NLNRIERLVKNGLLS----------------KMTKRPFTG 488
               ++PK  A+         NLNRIERLVKNGLLS                KMTKRPFTG
Sbjct: 443  RLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTG 502

Query: 489  KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY 548
            KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY
Sbjct: 503  KGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEY 562

Query: 549  KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL 608
            KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL
Sbjct: 563  KAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTL 622

Query: 609  LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKG---------- 668
            LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKG          
Sbjct: 623  LDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGC 682

Query: 669  -----------------------YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP 728
                                   YPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP
Sbjct: 683  PAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP 742

Query: 729  RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR 788
            RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR
Sbjct: 743  RSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIR 802

Query: 789  YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV 848
            YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV
Sbjct: 803  YMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGV 862

Query: 849  KPIGCKWIYKRK-----EVQM--VRLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA 908
            KPIGCKWIYKRK     +VQ    RLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA
Sbjct: 863  KPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAA 922

Query: 909  YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI 968
            YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI
Sbjct: 923  YFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNI 982

Query: 969  RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF 1028
            RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF
Sbjct: 983  RFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQF 1042

Query: 1029 QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK 1088
            QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK
Sbjct: 1043 QMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK 1102

Query: 1089 EQCPKTPQDVEEMRHIPYASAVGSLI------------------RYQSNPGLAHWTAVKT 1136
            EQCPKTPQDVEEMRHIPYASAVGSL+                  RYQSNPGLAHWTAVKT
Sbjct: 1103 EQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKT 1162

[Close]

BLAST of IVF0025840 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 271.6 bits (693), Expect = 3.0e-72
Identity = 159/477 (33.33%), Postives = 257/477 (53.88%), Query Frame = 0


Query: 654  EDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRK---- 713
            ++P T+ +A E +    W  AM+ E+ +M     W++   P   KPIGCKW+YK K    
Sbjct: 84   KEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143

Query: 714  ---EVQMVRLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFL 773
               E    RLVAKGYTQ EG+D+ ETFSPV  L S++++L+I+A +++ + Q+D+  AFL
Sbjct: 144  GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 203

Query: 774  NGNLEETIYMQQPEGFIIPGQE----QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFD 833
            NG+L+E IYM+ P G+     +      +C L +SIYGLKQASR W ++F   +  +GF 
Sbjct: 204  NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 263

Query: 834  QIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVL 893
            Q   +   + +I       +++YVDDI++  N+   + ++K  L + F+++DLG  ++ L
Sbjct: 264  QSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 323

Query: 894  GIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVE- 953
            G++I R      + + Q  Y   ++ +  +   K   +P    VT S             
Sbjct: 324  GLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAY 383

Query: 954  ----------EMRHIPYASAVGSLIRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSK- 1013
                      ++  +  + AV  L ++   P LAH  AV  IL Y++ T    L Y S+ 
Sbjct: 384  RRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQA 443

Query: 1014 DLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAA 1073
            ++ L  ++D+ FQ+ +D+R+ST+G    L    + W+S KQ  ++ S+ EAEY A   A 
Sbjct: 444  EMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFAT 503

Query: 1074 KEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIRE 1108
             E +WL  F  +L++   +SKP  L+CDN+ A+  +     H+R KHIE   H +RE
Sbjct: 504  DEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553

[Close]

BLAST of IVF0025840 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 83.2 bits (204), Expect = 1.5e-15
Identity = 67/226 (29.65%), Postives = 107/226 (47.35%), Query Frame = 0


Query: 841  FLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQA 900
            +L+LYVDDILL G+   LL  +   L++ F MKDLG   + LGIQI        L LSQ 
Sbjct: 2    YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQT 61

Query: 901  SYIDKIVVKYSMQNSK--RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLIRY 960
             Y ++I+    M + K     LP +   ++S  + P        +  + Y +     I Y
Sbjct: 62   KYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 121

Query: 961  QSN--------PGLAHWTAVKTILKYLRRTRDYTL-VYGSKDLILTGYTDSDFQTDRDSR 1020
              N        P LA +  +K +L+Y++ T  + L ++ +  L +  + DSD+     +R
Sbjct: 122  AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 181

Query: 1021 KSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVW 1056
            +ST+G    L    + W + +Q  ++ S+ E EY A    A E  W
Sbjct: 182  RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of IVF0025840 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 68.9 bits (167), Expect = 3.0e-11
Identity = 45/131 (34.35%), Postives = 69/131 (52.67%), Query Frame = 0


Query: 626 RRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFN 685
           R    +  L  +Y SLT T T+      ++P +   A++D     W +AM  EL+++  N
Sbjct: 4   RSKAGINKLNPKY-SLTITTTI-----KKEPKSVIFALKD---PGWCQAMQEELDALSRN 63

Query: 686 SVWDLVDQPDGVKPIGCKWIYKRK-------EVQMVRLVAKGYTQVEGVDYEETFSPVAM 745
             W LV  P     +GCKW++K K       +    RLVAKG+ Q EG+ + ET+SPV  
Sbjct: 64  KTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVR 123

Query: 746 LKSIRILLSIA 750
             +IR +L++A
Sbjct: 124 TATIRTILNVA 125

The following BLAST results are available for this feature:

BLAST of IVF0025840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.2e-161	38.04	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	1.1e-108	29.39	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q94HW2	2.4e-90	27.50	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	3.4e-89	26.90	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P25600	6.2e-30	31.53	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of IVF0025840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SMH8	0.0e+00	83.59	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]
A0A5D3CPJ6	0.0e+00	83.59	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004...	[more]
A0A5A7TZD7	0.0e+00	83.51	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G0013...	[more]
A0A5D3CSZ6	0.0e+00	83.36	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G0032...	[more]
A0A5A7UGV2	0.0e+00	83.36	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G00269...	[more]

BLAST of IVF0025840 vs. NCBI nr


Match Name	Identity	Description
KAA0035879.1	83.43	gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumi...	[more]
KAA0031826.1	83.43	gag/pol protein [Cucumis melo var. makuwa] >KAA0032384.1 gag/pol protein [Cucumi...	[more]
KAA0048404.1	83.36	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK14550.1	83.21	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0054490.1	83.21	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of IVF0025840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	3.0e-72	33.33	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.5e-15	29.65	DNA/RNA polymerases superfamily protein	[more]
ATMG00820.1	3.0e-11	34.35	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 420..440
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 48..179 e-value: 2.0E-17 score: 63.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 609..628
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..230
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 361..532 coord: 647..986
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 995..1136 e-value: 9.99102E-64 score: 210.402
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 376..477 e-value: 9.3E-11 score: 41.9
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 374..539 score: 23.412086
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 685..921 e-value: 2.9E-71 score: 239.9
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 371..546 e-value: 7.0E-39 score: 135.2
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 686..1103
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 373..533

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0025840.1	IVF0025840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding