IVF0025811 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTCGGACTCAGTTTTTCTATCGTCGAGTAAAAAGAGGTCCTGCAACGGTTTCTTTGTTTTGTATTGGTCATACATGCTTTGAGCTTCGAAACTCCTACTTTGAGGACTTTAGTCTACACTTTTGGCATCGTCTCTCACCCATTTTTCGAAAGAATAGGTTGGGAAGCGAGCTCGTTGGAAAGAGAACTAATGTGCAACCCGAAACGATCGAAACGATGGACAATGCTCTTCCAACGTGTGGCGAACACTCATCCGGTGTCAGAAACAAGTGA ATGCCTCGGACTCAGTTTTTCTATCGTCGAGTAAAAAGAGGTCCTGCAACGGTTTCTTTGTTTTGTATTGGTCATACATGCTTTGAGCTTCGAAACTCCTACTTTGAGGACTTTAGTCTACACTTTTGGCATCGTCTCTCACCCATTTTTCGAAAGAATAGGTTGGGAAGCGAGCTCGTTGGAAAGAGAACTAATGTGCAACCCGAAACGATCGAAACGATGGACAATGCTCTTCCAACGTGTGGCGAACACTCATCCGGTGTCAGAAACAAGTGA ATGCCTCGGACTCAGTTTTTCTATCGTCGAGTAAAAAGAGGTCCTGCAACGGTTTCTTTGTTTTGTATTGGTCATACATGCTTTGAGCTTCGAAACTCCTACTTTGAGGACTTTAGTCTACACTTTTGGCATCGTCTCTCACCCATTTTTCGAAAGAATAGGTTGGGAAGCGAGCTCGTTGGAAAGAGAACTAATGTGCAACCCGAAACGATCGAAACGATGGACAATGCTCTTCCAACGTGTGGCGAACACTCATCCGGTGTCAGAAACAAGTGA MPRTQFFYRRVKRGPATVSLFCIGHTCFELRNSYFEDFSLHFWHRLSPIFRKNRLGSELVGKRTNVQPETIETMDNALPTCGEHSSGVRNK Homology
BLAST of IVF0025811 vs. ExPASy TrEMBL
Match: A0A5A7VEB1 (Retrotransposon protein, putative, Ty3-gypsy subclass, expressed OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold638G00210 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 3.2e-17 Identity = 54/109 (49.54%), Postives = 61/109 (55.96%), Query Frame = 0
BLAST of IVF0025811 vs. ExPASy TrEMBL
Match: A0A5D3CKZ2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold769G00020 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 3.1e-12 Identity = 38/68 (55.88%), Postives = 46/68 (67.65%), Query Frame = 0
BLAST of IVF0025811 vs. ExPASy TrEMBL
Match: A0A5D3BG85 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1625G00140 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 5.4e-09 Identity = 34/51 (66.67%), Postives = 38/51 (74.51%), Query Frame = 0
BLAST of IVF0025811 vs. ExPASy TrEMBL
Match: A0A5A7U1Q6 (Retrotransposon protein, putative, Ty3-gypsy sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00650 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 4.3e-06 Identity = 48/143 (33.57%), Postives = 55/143 (38.46%), Query Frame = 0
BLAST of IVF0025811 vs. ExPASy TrEMBL
Match: A0A5A7VGQ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold638G00090 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 2.1e-05 Identity = 33/62 (53.23%), Postives = 38/62 (61.29%), Query Frame = 0
BLAST of IVF0025811 vs. NCBI nr
Match: KAA0065520.1 (retrotransposon protein, putative, Ty3-gypsy subclass, expressed [Cucumis melo var. makuwa]) HSP 1 Score: 97.4 bits (241), Expect = 3.73e-21 Identity = 54/109 (49.54%), Postives = 61/109 (55.96%), Query Frame = 0
BLAST of IVF0025811 vs. NCBI nr
Match: KAA0051945.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK12215.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 80.1 bits (196), Expect = 1.22e-16 Identity = 38/68 (55.88%), Postives = 46/68 (67.65%), Query Frame = 0
BLAST of IVF0025811 vs. NCBI nr
Match: TYJ98800.1 (uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa]) HSP 1 Score: 70.9 bits (172), Expect = 7.74e-12 Identity = 34/51 (66.67%), Postives = 38/51 (74.51%), Query Frame = 0
BLAST of IVF0025811 vs. NCBI nr
Match: KAA0047409.1 (retrotransposon protein, putative, Ty3-gypsy sub-class [Cucumis melo var. makuwa] >TYK14084.1 retrotransposon protein, putative, Ty3-gypsy sub-class [Cucumis melo var. makuwa]) HSP 1 Score: 60.5 bits (145), Expect = 3.51e-08 Identity = 48/143 (33.57%), Postives = 55/143 (38.46%), Query Frame = 0
BLAST of IVF0025811 vs. NCBI nr
Match: KAA0065516.1 (uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa]) HSP 1 Score: 58.5 bits (140), Expect = 1.71e-07 Identity = 33/62 (53.23%), Postives = 38/62 (61.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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