IVF0025786 (gene) Melon (IVF77) v1

Overview
NameIVF0025786
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr11: 25468878 .. 25469448 (+)
RNA-Seq ExpressionIVF0025786
SyntenyIVF0025786
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATAACCTTACTTCTCATGGCTTCTCTTTACCCGTATTTCTTCATTTATCTCCTCTTCCTTCTTATTCTATCTTCTCCTACTCAATCTATGTGTGCTCGTTGCGTCCCCCCAAGCGCCCCTAGCACCATCGTTAGACCGCTTGCTGCCACGCCCGACAATGCTGAAGACTACGAGACTGTGAAGCCTCAACTTATTAACCGAAAGAGGCTGGTTTTTGGTGGGAATGAAGTCAAGAGCTGCCTTCCTAAAGGCTTTCGACGATCCTCCGCCCCTAGTCGATTTGTTAATTATCATACTTCTGGTGGTTGTTCTCCGACTACTGATCATTCTATTAACACCAACCCTTGAGAAAATGAAAAAAAGATAAAAAGAACAGAGAATATATGTTTTATTGTTTGTTCCATTTTTGTTGTATATGCTTCTCCCTCCTTCATCTAATTTATTTTTATATATGTTCCTCATATATAAAAATAACTTTTGTTTATTCAATTTTTCTTATTATAATTTGTTCTTCAAAAATTGTGGAACCCCAACTCATGAACCTTGATTATATATATGATTAATTATTTG

mRNA sequence

AATAACCTTACTTCTCATGGCTTCTCTTTACCCGTATTTCTTCATTTATCTCCTCTTCCTTCTTATTCTATCTTCTCCTACTCAATCTATGTGTGCTCGTTGCGTCCCCCCAAGCGCCCCTAGCACCATCGTTAGACCGCTTGCTGCCACGCCCGACAATGCTGAAGACTACGAGACTGTGAAGCCTCAACTTATTAACCGAAAGAGGCTGGTTTTTGGTGGGAATGAAGTCAAGAGCTGCCTTCCTAAAGGCTTTCGACGATCCTCCGCCCCTAGTCGATTTGTTAATTATCATACTTCTGGTGGTTGTTCTCCGACTACTGATCATTCTATTAACACCAACCCTTGAGAAAATGAAAAAAAGATAAAAAGAACAGAGAATATATGTTTTATTGTTTGTTCCATTTTTGTTGTATATGCTTCTCCCTCCTTCATCTAATTTATTTTTATATATGTTCCTCATATATAAAAATAACTTTTGTTTATTCAATTTTTCTTATTATAATTTGTTCTTCAAAAATTGTGGAACCCCAACTCATGAACCTTGATTATATATATGATTAATTATTTG

Coding sequence (CDS)

ATGGCTTCTCTTTACCCGTATTTCTTCATTTATCTCCTCTTCCTTCTTATTCTATCTTCTCCTACTCAATCTATGTGTGCTCGTTGCGTCCCCCCAAGCGCCCCTAGCACCATCGTTAGACCGCTTGCTGCCACGCCCGACAATGCTGAAGACTACGAGACTGTGAAGCCTCAACTTATTAACCGAAAGAGGCTGGTTTTTGGTGGGAATGAAGTCAAGAGCTGCCTTCCTAAAGGCTTTCGACGATCCTCCGCCCCTAGTCGATTTGTTAATTATCATACTTCTGGTGGTTGTTCTCCGACTACTGATCATTCTATTAACACCAACCCTTGA

Protein sequence

MASLYPYFFIYLLFLLILSSPTQSMCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHSINTNP
Homology
BLAST of IVF0025786 vs. ExPASy TrEMBL
Match: A0A0A0KDD3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147570 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.4e-51
Identity = 106/110 (96.36%), Postives = 108/110 (98.18%), Query Frame = 0

Query: 1   MASLYPYFFIYLLFLLILSSPTQSMCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLI 60
           MASL+PYFFIYLLFLL+LSSPTQSMCARCVPPSAPSTIVRPL ATPDNAE YETVKPQLI
Sbjct: 1   MASLFPYFFIYLLFLLLLSSPTQSMCARCVPPSAPSTIVRPL-ATPDNAEAYETVKPQLI 60

Query: 61  NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHSINTNP 111
           NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHSINTNP
Sbjct: 61  NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHSINTNP 109

BLAST of IVF0025786 vs. ExPASy TrEMBL
Match: A0A5D3DGK4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold173G00130 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.6e-42
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0

Query: 25  MCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSS 84
           MCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSS
Sbjct: 1   MCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSS 60

Query: 85  APSRFVNYHTSGGCSPTTDHSINTNP 111
           APSRFVNYHTSGGCSPTTDHSINTNP
Sbjct: 61  APSRFVNYHTSGGCSPTTDHSINTNP 86

BLAST of IVF0025786 vs. ExPASy TrEMBL
Match: A0A2P5CZN8 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_109280 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.1e-16
Identity = 52/98 (53.06%), Postives = 63/98 (64.29%), Query Frame = 0

Query: 3   SLYPYFFIYLLFLLILSSPTQSMCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINR 62
           SLY    +Y + LL+LSS   SM  R +P SAPST+VRPL    D  +DY +++P L   
Sbjct: 27  SLYVMILLYSIILLLLSSFDVSMAGRAIPSSAPSTVVRPLVTDAD--QDYVSLRPHLNPG 86

Query: 63  KRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSP 101
           +  VF G E K CLPKGFR +SAPSRFVNYH  G  SP
Sbjct: 87  QNQVFRGREFKGCLPKGFRHASAPSRFVNYHPLGALSP 122

BLAST of IVF0025786 vs. ExPASy TrEMBL
Match: A0A2P5FTP0 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_029170 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 5.6e-16
Identity = 51/98 (52.04%), Postives = 62/98 (63.27%), Query Frame = 0

Query: 3   SLYPYFFIYLLFLLILSSPTQSMCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINR 62
           SLY    +Y +  L+LSS   SM  R +P SAPST+VRPL    D  +DY +++P L   
Sbjct: 6   SLYVMILLYSIISLLLSSFDVSMAGRAIPSSAPSTVVRPLVTDAD--QDYVSLRPHLNPG 65

Query: 63  KRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSP 101
           +  VF G E K CLPKGFR +SAPSRFVNYH  G  SP
Sbjct: 66  QNQVFRGREFKGCLPKGFRHASAPSRFVNYHPLGALSP 101

BLAST of IVF0025786 vs. ExPASy TrEMBL
Match: A0A314YWA3 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_04778 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.7e-15
Identity = 48/86 (55.81%), Postives = 60/86 (69.77%), Query Frame = 0

Query: 15  LLILSSPTQSMCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINRKRLVFGGNEVKS 74
           LL  +    S+ AR +P SAPST+VRPL    +  + Y ++KPQ +N K+ VF G EVK 
Sbjct: 14  LLFFTCFDVSLAARNIPSSAPSTMVRPLVT--EGLDHYVSMKPQDLNHKQQVFHGTEVKD 73

Query: 75  CLPKGFRRSSAPSRFVNYHTSG-GCS 100
           CLPKGFR +SAPSR+VNYHT G GCS
Sbjct: 74  CLPKGFRHASAPSRYVNYHTLGQGCS 97

BLAST of IVF0025786 vs. NCBI nr
Match: KAE8646888.1 (hypothetical protein Csa_020968, partial [Cucumis sativus])

HSP 1 Score: 202 bits (513), Expect = 4.84e-65
Identity = 101/105 (96.19%), Postives = 103/105 (98.10%), Query Frame = 0

Query: 1   MASLYPYFFIYLLFLLILSSPTQSMCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLI 60
           MASL+PYFFIYLLFLL+LSSPTQSMCARCVPPSAPSTIVRPLA TPDNAE YETVKPQLI
Sbjct: 3   MASLFPYFFIYLLFLLLLSSPTQSMCARCVPPSAPSTIVRPLA-TPDNAEAYETVKPQLI 62

Query: 61  NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHS 105
           NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHS
Sbjct: 63  NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHS 106

BLAST of IVF0025786 vs. NCBI nr
Match: KAA0035234.1 (hypothetical protein E6C27_scaffold228G00110 [Cucumis melo var. makuwa] >TYK22389.1 hypothetical protein E5676_scaffold173G00130 [Cucumis melo var. makuwa])

HSP 1 Score: 182 bits (461), Expect = 2.08e-57
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0

Query: 25  MCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSS 84
           MCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSS
Sbjct: 1   MCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSS 60

Query: 85  APSRFVNYHTSGGCSPTTDHSINTNP 110
           APSRFVNYHTSGGCSPTTDHSINTNP
Sbjct: 61  APSRFVNYHTSGGCSPTTDHSINTNP 86

BLAST of IVF0025786 vs. NCBI nr
Match: KAG6570806.1 (hypothetical protein SDJN03_29721, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 174 bits (440), Expect = 5.98e-54
Identity = 94/108 (87.04%), Postives = 99/108 (91.67%), Query Frame = 0

Query: 1   MASLYPYFFIYLLFLLILSSPTQSMCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLI 60
           MASL+P+ F YLLFLL+LSSP+ SM ARCVPPSAPSTIV PLA TP+ AEDYETVKPQL 
Sbjct: 1   MASLFPFLF-YLLFLLLLSSPSPSMAARCVPPSAPSTIVTPLA-TPE-AEDYETVKPQL- 60

Query: 61  NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHSINT 108
           NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCS TTDHSINT
Sbjct: 61  NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSSTTDHSINT 104

BLAST of IVF0025786 vs. NCBI nr
Match: KAF3961747.1 (hypothetical protein CMV_013666 [Castanea mollissima])

HSP 1 Score: 99.8 bits (247), Expect = 1.37e-24
Identity = 56/91 (61.54%), Postives = 64/91 (70.33%), Query Frame = 0

Query: 7  YFFIYLLFLLILSSPTQSMCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINRKRLV 66
          Y+ + L  LL+LSS   +M AR +P SAPSTIVRPL +    A+DY T+KP L   K  V
Sbjct: 6  YYTLVLCLLLLLSSIDTNMAARKIPSSAPSTIVRPLVS---EAQDYVTMKP-LFKHKHRV 65

Query: 67 FGGNEVKSCLPKGFRRSSAPSRFVNYHTSGG 97
          F G EVKSCLPKGFR SSAPSRFVNYH  GG
Sbjct: 66 FRGKEVKSCLPKGFRHSSAPSRFVNYHALGG 92

BLAST of IVF0025786 vs. NCBI nr
Match: PON66506.1 (hypothetical protein PanWU01x14_109280, partial [Parasponia andersonii])

HSP 1 Score: 96.3 bits (238), Expect = 7.73e-23
Identity = 52/98 (53.06%), Postives = 63/98 (64.29%), Query Frame = 0

Query: 3   SLYPYFFIYLLFLLILSSPTQSMCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINR 62
           SLY    +Y + LL+LSS   SM  R +P SAPST+VRPL    D  +DY +++P L   
Sbjct: 27  SLYVMILLYSIILLLLSSFDVSMAGRAIPSSAPSTVVRPLVTDAD--QDYVSLRPHLNPG 86

Query: 63  KRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSP 100
           +  VF G E K CLPKGFR +SAPSRFVNYH  G  SP
Sbjct: 87  QNQVFRGREFKGCLPKGFRHASAPSRFVNYHPLGALSP 122

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KDD31.4e-5196.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147570 PE=4 SV=1[more]
A0A5D3DGK42.6e-42100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A2P5CZN81.1e-1653.06Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A2P5FTP05.6e-1652.04Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_029170 PE=4 SV... [more]
A0A314YWA34.7e-1555.81Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_047... [more]
Match NameE-valueIdentityDescription
KAE8646888.14.84e-6596.19hypothetical protein Csa_020968, partial [Cucumis sativus][more]
KAA0035234.12.08e-57100.00hypothetical protein E6C27_scaffold228G00110 [Cucumis melo var. makuwa] >TYK2238... [more]
KAG6570806.15.98e-5487.04hypothetical protein SDJN03_29721, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAF3961747.11.37e-2461.54hypothetical protein CMV_013666 [Castanea mollissima][more]
PON66506.17.73e-2353.06hypothetical protein PanWU01x14_109280, partial [Parasponia andersonii][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36619:SF2OS04G0208900 PROTEINcoord: 1..103
NoneNo IPR availablePANTHERPTHR36619OS04G0208900 PROTEINcoord: 1..103

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0025786.1IVF0025786.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane