IVF0025782 (gene) Melon (IVF77) v1

Overview


Name	IVF0025782
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Asp_protease domain-containing protein
Location	chr05: 3193389 .. 3193790 (-)
RNA-Seq Expression	IVF0025782
Synteny	IVF0025782

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTAGACACAGATGCAACCAATAATGTGATGGATCTTAAAGAGGCTAAGCGGTTAGGCCTTAGGACGACGAGAAGAAGCGACATTGAGATAAAGATCATCGGTGCCAAACCAATGAGGAACCTTGGATGGGATTGGGATGTCAAGACAAGGGTAGAAGGATGGCAAGGTAAGCTTGATTTCCTCATAACCCTTCTTGATGATTATAAGATAGTCGTAGGGTTGGACTTCGTTGATAAAGCCCATGCCACAATCAACCTATTGAAGAAGACCCTAGATTTTCCTCGCATAAGGAGGGAGGTGCCCCTTAAACGCATGGAAGCGACAAAAGGGGGGAGGGTGTCACATACCGTGAAAATCACCCTAAAATTTATGTCGGATCGTGTCACAAGGCTCTTATAG

mRNA sequence

ATGCTAGACACAGATGCAACCAATAATGTGATGGATCTTAAAGAGGCTAAGCGGTTAGGCCTTAGGACGACGAGAAGAAGCGACATTGAGATAAAGATCATCGGTGCCAAACCAATGAGGAACCTTGGATGGGATTGGGATGTCAAGACAAGGGTAGAAGGATGGCAAGGTAAGCTTGATTTCCTCATAACCCTTCTTGATGATTATAAGATAGTCGTAGGGTTGGACTTCGTTGATAAAGCCCATGCCACAATCAACCTATTGAAGAAGACCCTAGATTTTCCTCGCATAAGGAGGGAGGTGCCCCTTAAACGCATGGAAGCGACAAAAGGGGGGAGGGTGTCACATACCGTGAAAATCACCCTAAAATTTATGTCGGATCGTGTCACAAGGCTCTTATAG

Coding sequence (CDS)

ATGCTAGACACAGATGCAACCAATAATGTGATGGATCTTAAAGAGGCTAAGCGGTTAGGCCTTAGGACGACGAGAAGAAGCGACATTGAGATAAAGATCATCGGTGCCAAACCAATGAGGAACCTTGGATGGGATTGGGATGTCAAGACAAGGGTAGAAGGATGGCAAGGTAAGCTTGATTTCCTCATAACCCTTCTTGATGATTATAAGATAGTCGTAGGGTTGGACTTCGTTGATAAAGCCCATGCCACAATCAACCTATTGAAGAAGACCCTAGATTTTCCTCGCATAAGGAGGGAGGTGCCCCTTAAACGCATGGAAGCGACAAAAGGGGGGAGGGTGTCACATACCGTGAAAATCACCCTAAAATTTATGTCGGATCGTGTCACAAGGCTCTTATAG

Protein sequence

MLDTDATNNVMDLKEAKRLGLRTTRRSDIEIKIIGAKPMRNLGWDWDVKTRVEGWQGKLDFLITLLDDYKIVVGLDFVDKAHATINLLKKTLDFPRIRREVPLKRMEATKGGRVSHTVKITLKFMSDRVTRLL

Homology

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BLAST of IVF0025782 vs. ExPASy TrEMBL
Match: A0A5A7UQ97 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00090 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 2.1e-49
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MLDTDATNNVMDLKEAKRLGLRTTRRSDIEIKIIGAKPMRNLGWDWDVKTRVEGWQGKLD 60
           MLDTDATNNVMDLKEAKRLGLRTTRRSDIEIKIIGAKPMRNLGWDWDVKTRVEGWQGKLD
Sbjct: 1   MLDTDATNNVMDLKEAKRLGLRTTRRSDIEIKIIGAKPMRNLGWDWDVKTRVEGWQGKLD 60

Query: 61  FLITLLDDYKIVVGLDFVDKAHATINLLKKTLDFPRIRRE 101
           FLITLLDDYKIVVGLDFVDKAHATINLLKKTLDFPRIRRE
Sbjct: 61  FLITLLDDYKIVVGLDFVDKAHATINLLKKTLDFPRIRRE 100

[Close]

BLAST of IVF0025782 vs. ExPASy TrEMBL
Match: A0A5D3E2A4 (Asp_protease domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold587G00310 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 6.5e-35
Identity = 79/109 (72.48%), Postives = 88/109 (80.73%), Query Frame = 0


Query: 1   MLDTDATNNVMDLKEAKRLGLRTTRRSDIEIKIIGAKPMRNLGWDWDVKTRVEGWQGKLD 60
           MLD  AT NVMD KEAKRLGLR TRRSD EIKII  KPM N+ W WDVK R+ G QG+LD
Sbjct: 13  MLDIGATKNVMDPKEAKRLGLRITRRSDTEIKIINGKPMMNIRWAWDVKIRIGGCQGELD 72

Query: 61  FLITLLDDYKIVVGLDFVDKAHATINLLKKTLDFPRIRREVPLKRMEAT 110
           FLI  L+D KI++GLDF+D+A+ATINL KKTL F RIRREVPLKRM AT
Sbjct: 73  FLIAPLNDCKIILGLDFIDRAYATINLFKKTLGFSRIRREVPLKRMGAT 121

[Close]

BLAST of IVF0025782 vs. ExPASy TrEMBL
Match: A0A5D3E2B7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold587G00360 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 3.5e-33
Identity = 79/115 (68.70%), Postives = 90/115 (78.26%), Query Frame = 0


Query: 16  AKRLGLRTTRRSDIEIKIIGAKPMRNLGWDWDVKTRVEGWQGKLDFLITLLDDYKIVVGL 75
           AKRLGL+ TRRSD EIKII AKP+RN+G  WD+KTRV GWQG+LDFLI  L+DYKIV+GL
Sbjct: 241 AKRLGLKITRRSDTEIKIISAKPLRNIGRAWDIKTRVGGWQGELDFLIAPLNDYKIVIGL 300

Query: 76  DFVDKAHATINLLKKTLDFPRIRREVPLKRME-----ATKGGRVSHTVKITLKFM 126
           DF+DKAHATINLLKKTLDFPRIRRE  +           +  RVS TVK TLKF+
Sbjct: 301 DFIDKAHATINLLKKTLDFPRIRREGRVNPRSQQGRYELEWERVSCTVKNTLKFV 355

[Close]

BLAST of IVF0025782 vs. ExPASy TrEMBL
Match: A0A5A7T2W8 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00550 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 5.5e-26
Identity = 62/84 (73.81%), Postives = 71/84 (84.52%), Query Frame = 0


Query: 1   MLDTDATNNVMDLKEAKRLGLRTTRRSDIEIKIIGAKPMRNLGWDWDVKTRVEGWQGKLD 60
           MLD  AT+NVMD +EAKRLGLRTTRRSD EIKII AK M+N+GW  DVKTRV GWQGKL+
Sbjct: 374 MLDAGATHNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIGWAQDVKTRVGGWQGKLN 433

Query: 61  FLITLLDDYKIVVGLDFVDKAHAT 85
           FLI  LDD KI++GLDFVD AH++
Sbjct: 434 FLIAHLDDCKIILGLDFVDTAHSS 457

[Close]

BLAST of IVF0025782 vs. ExPASy TrEMBL
Match: A0A5A7T3H7 (DNA damage-inducible protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00570 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 8.2e-22
Identity = 55/77 (71.43%), Postives = 61/77 (79.22%), Query Frame = 0


Query: 39  MRNLGWDWDVKTRVEGWQGKLDFLITLLDDYKIVVGLDFVDKAHATINLLKKTLDFPRIR 98
           M+N+GW  DVKTRV GWQGKLDFLI  LDD KIV+GLDF+D AHATIN +KKTLDF  IR
Sbjct: 1   MKNIGWAQDVKTRVGGWQGKLDFLIAPLDDCKIVLGLDFIDTAHATINFMKKTLDFTHIR 60

Query: 99  REVPLKRMEATKGGRVS 116
            E PLKRM AT   R+S
Sbjct: 61  EEAPLKRMGATGEVRLS 77

[Close]

BLAST of IVF0025782 vs. NCBI nr
Match: KAA0057354.1 (uncharacterized protein E6C27_scaffold280G002130 [Cucumis melo var. makuwa] >TYK30043.1 uncharacterized protein E5676_scaffold216G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 206 bits (523), Expect = 2.69e-64
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MLDTDATNNVMDLKEAKRLGLRTTRRSDIEIKIIGAKPMRNLGWDWDVKTRVEGWQGKLD 60
           MLDTDATNNVMDLKEAKRLGLRTTRRSDIEIKIIGAKPMRNLGWDWDVKTRVEGWQGKLD
Sbjct: 1   MLDTDATNNVMDLKEAKRLGLRTTRRSDIEIKIIGAKPMRNLGWDWDVKTRVEGWQGKLD 60

Query: 61  FLITLLDDYKIVVGLDFVDKAHATINLLKKTLDFPRIRRE 100
           FLITLLDDYKIVVGLDFVDKAHATINLLKKTLDFPRIRRE
Sbjct: 61  FLITLLDDYKIVVGLDFVDKAHATINLLKKTLDFPRIRRE 100

[Close]

BLAST of IVF0025782 vs. NCBI nr
Match: TYK30022.1 (Asp_protease domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 158 bits (399), Expect = 4.34e-47
Identity = 79/109 (72.48%), Postives = 88/109 (80.73%), Query Frame = 0


Query: 1   MLDTDATNNVMDLKEAKRLGLRTTRRSDIEIKIIGAKPMRNLGWDWDVKTRVEGWQGKLD 60
           MLD  AT NVMD KEAKRLGLR TRRSD EIKII  KPM N+ W WDVK R+ G QG+LD
Sbjct: 13  MLDIGATKNVMDPKEAKRLGLRITRRSDTEIKIINGKPMMNIRWAWDVKIRIGGCQGELD 72

Query: 61  FLITLLDDYKIVVGLDFVDKAHATINLLKKTLDFPRIRREVPLKRMEAT 109
           FLI  L+D KI++GLDF+D+A+ATINL KKTL F RIRREVPLKRM AT
Sbjct: 73  FLIAPLNDCKIILGLDFIDRAYATINLFKKTLGFSRIRREVPLKRMGAT 121

[Close]

BLAST of IVF0025782 vs. NCBI nr
Match: TYK30026.1 (uncharacterized protein E5676_scaffold587G00360 [Cucumis melo var. makuwa])

HSP 1 Score: 152 bits (384), Expect = 5.23e-41
Identity = 81/116 (69.83%), Postives = 92/116 (79.31%), Query Frame = 0


Query: 16  AKRLGLRTTRRSDIEIKIIGAKPMRNLGWDWDVKTRVEGWQGKLDFLITLLDDYKIVVGL 75
           AKRLGL+ TRRSD EIKII AKP+RN+G  WD+KTRV GWQG+LDFLI  L+DYKIV+GL
Sbjct: 241 AKRLGLKITRRSDTEIKIISAKPLRNIGRAWDIKTRVGGWQGELDFLIAPLNDYKIVIGL 300

Query: 76  DFVDKAHATINLLKKTLDFPRIRREVPLK------RMEATKGGRVSHTVKITLKFM 125
           DF+DKAHATINLLKKTLDFPRIRRE  +       R E  +  RVS TVK TLKF+
Sbjct: 301 DFIDKAHATINLLKKTLDFPRIRREGRVNPRSQQGRYEL-EWERVSCTVKNTLKFV 355

[Close]

BLAST of IVF0025782 vs. NCBI nr
Match: KAE8646814.1 (hypothetical protein Csa_005402 [Cucumis sativus])

HSP 1 Score: 137 bits (344), Expect = 5.48e-36
Identity = 60/104 (57.69%), Postives = 84/104 (80.77%), Query Frame = 0


Query: 1   MLDTDATNNVMDLKEAKRLGLRTTRRSDIEIKIIGAKPMRNLGWDWDVKTRVEGWQGKLD 60
           +LDT AT+N++DL+EAKRLGL+ TRR D+E+KII A+P RN GW W+VK ++  W+GK+D
Sbjct: 168 LLDTGATSNIIDLEEAKRLGLKITRRDDVELKIINAEPTRNYGWAWNVKVKIGEWKGKID 227

Query: 61  FLITLLDDYKIVVGLDFVDKAHATINLLKKTLDFPRIRREVPLK 104
           FL+  LDD K+V+GLDF+ +AHA ++  ++TL FP  +REVPLK
Sbjct: 228 FLLAPLDDCKVVLGLDFMKQAHAYVDATRETLVFPNKKREVPLK 271

[Close]

BLAST of IVF0025782 vs. NCBI nr
Match: KAE8637433.1 (hypothetical protein CSA_004611, partial [Cucumis sativus])

HSP 1 Score: 137 bits (344), Expect = 1.28e-35
Identity = 60/104 (57.69%), Postives = 84/104 (80.77%), Query Frame = 0


Query: 1   MLDTDATNNVMDLKEAKRLGLRTTRRSDIEIKIIGAKPMRNLGWDWDVKTRVEGWQGKLD 60
           +LDT AT+N++DL+EAKRLGL+ TRR D+E+KII A+P RN GW W+VK ++  W+GK+D
Sbjct: 275 LLDTGATSNIIDLEEAKRLGLKITRRDDVELKIINAEPTRNYGWAWNVKVKIGEWKGKID 334

Query: 61  FLITLLDDYKIVVGLDFVDKAHATINLLKKTLDFPRIRREVPLK 104
           FL+  LDD K+V+GLDF+ +AHA ++  ++TL FP  +REVPLK
Sbjct: 335 FLLAPLDDCKVVLGLDFMKQAHAYVDATRETLVFPNKKREVPLK 378

The following BLAST results are available for this feature:

BLAST of IVF0025782 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0025782 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UQ97	2.1e-49	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3E2A4	6.5e-35	72.48	Asp_protease domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5D3E2B7	3.5e-33	68.70	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7T2W8	5.5e-26	73.81	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7T3H7	8.2e-22	71.43	DNA damage-inducible protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of IVF0025782 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0057354.1	2.69e-64	100.00	uncharacterized protein E6C27_scaffold280G002130 [Cucumis melo var. makuwa] >TYK...	[more]
TYK30022.1	4.34e-47	72.48	Asp_protease domain-containing protein [Cucumis melo var. makuwa]	[more]
TYK30026.1	5.23e-41	69.83	uncharacterized protein E5676_scaffold587G00360 [Cucumis melo var. makuwa]	[more]
KAE8646814.1	5.48e-36	57.69	hypothetical protein Csa_005402 [Cucumis sativus]	[more]
KAE8637433.1	1.28e-35	57.69	hypothetical protein CSA_004611, partial [Cucumis sativus]	[more]

BLAST of IVF0025782 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 1..107 e-value: 1.5E-12 score: 49.3
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 1..77 e-value: 5.00287E-8 score: 45.7904

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0025782.1	IVF0025782.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008233	peptidase activity