IVF0025741 (gene) Melon (IVF77) v1

Overview


Name	IVF0025741
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Unknown protein
Location	chr02: 12390853 .. 12391268 (+)
RNA-Seq Expression	IVF0025741
Synteny	IVF0025741

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAACTCCTCAACCCTTTCAATTTGGACCTTCGAAATTCATATATTCATCGTTTGCTCTGTTTTCAAGAACAAGAAACAGAGGAAGAATGGAGAAGATGGGAGGAGTTGTTGGATCATGTGTGTTTGATGGAAGCTTATCAATGCAAGACTTTTTGATTGAACGAAGGCCTTACCATCGCAATTGTGGCTGTGCATTACACGATGATCGGTTTAGAAACGGAGCTGCTTGCTCTCATGCAATGAAACTCAAAAACTCTGTTTCGTTTCTCAAAACCCAAAAATGCCCAATAACTTCTCTCCAAATTCTTCGTTCCTCTTCAAAAGTCTCTTCTCGTCAATTTGTTAACTCGGAATCTCCTTCTTTTGTTTCCCAATTTTCAACATCTTCATAGAATTAGTAATTGACTTTTTTTT

mRNA sequence

CACAACTCCTCAACCCTTTCAATTTGGACCTTCGAAATTCATATATTCATCGTTTGCTCTGTTTTCAAGAACAAGAAACAGAGGAAGAATGGAGAAGATGGGAGGAGTTGTTGGATCATGTGTGTTTGATGGAAGCTTATCAATGCAAGACTTTTTGATTGAACGAAGGCCTTACCATCGCAATTGTGGCTGTGCATTACACGATGATCGGTTTAGAAACGGAGCTGCTTGCTCTCATGCAATGAAACTCAAAAACTCTGTTTCGTTTCTCAAAACCCAAAAATGCCCAATAACTTCTCTCCAAATTCTTCGTTCCTCTTCAAAAGTCTCTTCTCGTCAATTTGTTAACTCGGAATCTCCTTCTTTTGTTTCCCAATTTTCAACATCTTCATAGAATTAGTAATTGACTTTTTTTT

Coding sequence (CDS)

ATGGAGAAGATGGGAGGAGTTGTTGGATCATGTGTGTTTGATGGAAGCTTATCAATGCAAGACTTTTTGATTGAACGAAGGCCTTACCATCGCAATTGTGGCTGTGCATTACACGATGATCGGTTTAGAAACGGAGCTGCTTGCTCTCATGCAATGAAACTCAAAAACTCTGTTTCGTTTCTCAAAACCCAAAAATGCCCAATAACTTCTCTCCAAATTCTTCGTTCCTCTTCAAAAGTCTCTTCTCGTCAATTTGTTAACTCGGAATCTCCTTCTTTTGTTTCCCAATTTTCAACATCTTCATAG

Protein sequence

MEKMGGVVGSCVFDGSLSMQDFLIERRPYHRNCGCALHDDRFRNGAACSHAMKLKNSVSFLKTQKCPITSLQILRSSSKVSSRQFVNSESPSFVSQFSTSS

Homology

[Close]

BLAST of IVF0025741 vs. ExPASy TrEMBL
Match: A0A5A7U781 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00690 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.7e-48
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MEKMGGVVGSCVFDGSLSMQDFLIERRPYHRNCGCALHDDRFRNGAACSHAMKLKNSVSF 60
           MEKMGGVVGSCVFDGSLSMQDFLIERRPYHRNCGCALHDDRFRNGAACSHAMKLKNSVSF
Sbjct: 58  MEKMGGVVGSCVFDGSLSMQDFLIERRPYHRNCGCALHDDRFRNGAACSHAMKLKNSVSF 117

Query: 61  LKTQKCPITSLQILRSSSKVSSRQFVNSESPSFVSQFSTSS 102
           LKTQKCPITSLQILRSSSKVSSRQFVNSESPSFVSQFSTSS
Sbjct: 118 LKTQKCPITSLQILRSSSKVSSRQFVNSESPSFVSQFSTSS 158

[Close]

BLAST of IVF0025741 vs. ExPASy TrEMBL
Match: A0A0A0LZ02 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G265640 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.2e-34
Identity = 86/105 (81.90%), Postives = 88/105 (83.81%), Query Frame = 0


Query: 1   MEKMGGVVGSCVFDGSLSMQDFLIERRPYHRNCGCALHDDRFRNGAACSHAMKLKNSVSF 60
           MEKMGG VGS VFDGSLS+Q FLIERRPYHRNCGCALHDDR RNGAACSHA+K KNSVSF
Sbjct: 1   MEKMGG-VGSRVFDGSLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSVSF 60

Query: 61  LKTQKCPITSLQILRSSSKVSSRQFVNSESP----SFVSQFSTSS 102
           LKTQKCP TSLQIL S    SSRQFVNSESP     FV QFSTSS
Sbjct: 61  LKTQKCPKTSLQILPS----SSRQFVNSESPPPPLHFVYQFSTSS 100

[Close]

BLAST of IVF0025741 vs. ExPASy TrEMBL
Match: A0A2P6RIE3 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0086591 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.5e-10
Identity = 40/81 (49.38%), Postives = 52/81 (64.20%), Query Frame = 0


Query: 4  MGGVVGSCVFDGSLSMQDFLIERRPYHRNCGCALHDDRFRNGAACSHAMKLKNSVSFLKT 63
          + G++  CVF+GSLSMQD  IERRPYH+NC CALH  +     ACS A   + ++SF K 
Sbjct: 6  VSGMIFQCVFEGSLSMQDTEIERRPYHKNCNCALHKSK---RGACSDACPQQRNISFPKK 65

Query: 64 QKCPITSLQILRSSSKVSSRQ 85
          Q     SL I  ++SK+SS Q
Sbjct: 66 QLWTDGSLCISAATSKISSSQ 83

[Close]

BLAST of IVF0025741 vs. ExPASy TrEMBL
Match: A0A2P6RIF2 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0086581 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.2e-09
Identity = 40/79 (50.63%), Postives = 52/79 (65.82%), Query Frame = 0


Query: 4  MGGVVGSCVFDGSLSMQDFLIERRPYHRNCGCALHDDRFRNGAACSHAMKLKNSVSFLKT 63
          + G++  CVF+GSLSMQD  IERRPYH+NC CALH  +   G AC +A   +N +SF K 
Sbjct: 6  VSGMIFQCVFEGSLSMQDTEIERRPYHKNCNCALHKSK---GGACLNACPQRN-ISFPKK 65

Query: 64 QKCPITSLQILRSSSKVSS 83
          Q     SL +  ++SKVSS
Sbjct: 66 QSWTDGSLCMSAATSKVSS 80

[Close]

BLAST of IVF0025741 vs. ExPASy TrEMBL
Match: A0A2C9UMI8 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G139300 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.0e-08
Identity = 43/85 (50.59%), Postives = 51/85 (60.00%), Query Frame = 0


Query: 11 CVFDGSLSMQDFLIERRPYHRNCGCALHDDRFRNGAACSHAMKLKNS-VSFLKTQKCPIT 70
          CVFDGS+SM D  IERRPYHRNCGCALH  +    A CS+    + S +SF K Q     
Sbjct: 12 CVFDGSISMHDIEIERRPYHRNCGCALHSLK----AVCSNGCSPQRSYISFPKKQALFRC 71

Query: 71 SLQILRSSSKVSSR-----QFVNSE 90
          SL +  SSSK SS+      FVN +
Sbjct: 72 SLSLDTSSSKFSSQSSNVLNFVNDD 92

[Close]

BLAST of IVF0025741 vs. NCBI nr
Match: KAA0050036.1 (hypothetical protein E6C27_scaffold675G00110 [Cucumis melo var. makuwa] >TYK03640.1 hypothetical protein E5676_scaffold1369G00690 [Cucumis melo var. makuwa])

HSP 1 Score: 202 bits (513), Expect = 1.69e-64
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MEKMGGVVGSCVFDGSLSMQDFLIERRPYHRNCGCALHDDRFRNGAACSHAMKLKNSVSF 60
           MEKMGGVVGSCVFDGSLSMQDFLIERRPYHRNCGCALHDDRFRNGAACSHAMKLKNSVSF
Sbjct: 58  MEKMGGVVGSCVFDGSLSMQDFLIERRPYHRNCGCALHDDRFRNGAACSHAMKLKNSVSF 117

Query: 61  LKTQKCPITSLQILRSSSKVSSRQFVNSESPSFVSQFSTSS 101
           LKTQKCPITSLQILRSSSKVSSRQFVNSESPSFVSQFSTSS
Sbjct: 118 LKTQKCPITSLQILRSSSKVSSRQFVNSESPSFVSQFSTSS 158

[Close]

BLAST of IVF0025741 vs. NCBI nr
Match: KGN65216.1 (hypothetical protein Csa_019753 [Cucumis sativus])

HSP 1 Score: 155 bits (391), Expect = 1.05e-46
Identity = 86/105 (81.90%), Postives = 88/105 (83.81%), Query Frame = 0


Query: 1   MEKMGGVVGSCVFDGSLSMQDFLIERRPYHRNCGCALHDDRFRNGAACSHAMKLKNSVSF 60
           MEKMGGV GS VFDGSLS+Q FLIERRPYHRNCGCALHDDR RNGAACSHA+K KNSVSF
Sbjct: 1   MEKMGGV-GSRVFDGSLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSVSF 60

Query: 61  LKTQKCPITSLQILRSSSKVSSRQFVNSESPS----FVSQFSTSS 101
           LKTQKCP TSLQIL SSS    RQFVNSESP     FV QFSTSS
Sbjct: 61  LKTQKCPKTSLQILPSSS----RQFVNSESPPPPLHFVYQFSTSS 100

[Close]

BLAST of IVF0025741 vs. NCBI nr
Match: KAG6587851.1 (hypothetical protein SDJN03_16416, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 84.7 bits (208), Expect = 7.91e-19
Identity = 44/63 (69.84%), Postives = 51/63 (80.95%), Query Frame = 0


Query: 4  MGG-VVGSCVFDGSLSMQDFLIERRPYHRNCGCALHDDRFRNGAACSHAMKLKNSVSFLK 63
          MGG ++G CVFDGS+SM+DFLIERRPYHRNCGCALH  R +NG  C HA  L +SVSFLK
Sbjct: 1  MGGEMMGGCVFDGSISMRDFLIERRPYHRNCGCALHH-RLKNGG-CPHA--LNSSVSFLK 59

Query: 64 TQK 65
           +K
Sbjct: 61 ARK 59

[Close]

BLAST of IVF0025741 vs. NCBI nr
Match: XP_023531633.1 (uncharacterized protein LOC111793815 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 84.3 bits (207), Expect = 9.28e-19
Identity = 45/63 (71.43%), Postives = 49/63 (77.78%), Query Frame = 0


Query: 4  MGG-VVGSCVFDGSLSMQDFLIERRPYHRNCGCALHDDRFRNGAACSHAMKLKNSVSFLK 63
          MGG V+G CVFDGS+SM DFLIERRPYHRNCGCALH  R +NG  C HA  L  SVSFLK
Sbjct: 1  MGGEVMGGCVFDGSISMHDFLIERRPYHRNCGCALHH-RAKNGG-CPHA--LNTSVSFLK 59

Query: 64 TQK 65
           +K
Sbjct: 61 ARK 59

[Close]

BLAST of IVF0025741 vs. NCBI nr
Match: XP_023531631.1 (uncharacterized protein LOC111793815 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 84.3 bits (207), Expect = 1.72e-18
Identity = 45/63 (71.43%), Postives = 49/63 (77.78%), Query Frame = 0


Query: 4  MGG-VVGSCVFDGSLSMQDFLIERRPYHRNCGCALHDDRFRNGAACSHAMKLKNSVSFLK 63
          MGG V+G CVFDGS+SM DFLIERRPYHRNCGCALH  R +NG  C HA  L  SVSFLK
Sbjct: 1  MGGEVMGGCVFDGSISMHDFLIERRPYHRNCGCALHH-RAKNGG-CPHA--LNTSVSFLK 59

Query: 64 TQK 65
           +K
Sbjct: 61 ARK 59

[Close]

BLAST of IVF0025741 vs. TAIR 10
Match: AT5G35110.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 1.6e-06
Identity = 31/91 (34.07%), Postives = 47/91 (51.65%), Query Frame = 0


Query: 12  VFDGSLSMQDFLIERRPYHRNCGCALHDDRFRNGAA--CSH------------AMKLKNS 71
           +F+G +S  D  I+RRPYH+NCGCALH+     G+A  C H            +    NS
Sbjct: 13  IFEGCISSCDSSIQRRPYHKNCGCALHERSRGGGSATPCRHGRSEVVMFPIQRSWSEGNS 72

Query: 72  VSFLKTQKCPITSLQILRSSSKVSSRQFVNS 89
           ++         ++LQ L SSS +S+   ++S
Sbjct: 73  LALHLASSSSSSNLQSLSSSSSISTLASLSS 103

[Close]

BLAST of IVF0025741 vs. TAIR 10
Match: AT2G46490.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35110.1); Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 6.2e-06
Identity = 32/94 (34.04%), Postives = 49/94 (52.13%), Query Frame = 0


Query: 12 VFDGSLSMQDFLIERRPYHRNCGCALHDDRF---------------RNGAACSHAMKLKN 71
          +F+G +S  D  IERRPYH+NCGCALHD                  R+G++ S +  ++ 
Sbjct: 10 IFEGCISGLDSAIERRPYHKNCGCALHDKSSGAGKNQNQRRPPSCRRHGSSESISFPIRR 69

Query: 72 SVSFLKTQKCPITSLQILRSSSKVSSRQFVNSES 91
          S S     +  I ++ +  SSS  S+ Q ++S S
Sbjct: 70 SWS-----EGNIMAMNLFSSSSSSSNLQSLSSSS 98

The following BLAST results are available for this feature:

BLAST of IVF0025741 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0025741 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U781	1.7e-48	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LZ02	3.2e-34	81.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G265640 PE=4 SV=1	[more]
A0A2P6RIE3	2.5e-10	49.38	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0086591 PE=4...	[more]
A0A2P6RIF2	1.2e-09	50.63	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0086581 PE=4...	[more]
A0A2C9UMI8	1.0e-08	50.59	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G139300 PE=4 SV=...	[more]

BLAST of IVF0025741 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050036.1	1.69e-64	100.00	hypothetical protein E6C27_scaffold675G00110 [Cucumis melo var. makuwa] >TYK0364...	[more]
KGN65216.1	1.05e-46	81.90	hypothetical protein Csa_019753 [Cucumis sativus]	[more]
KAG6587851.1	7.91e-19	69.84	hypothetical protein SDJN03_16416, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023531633.1	9.28e-19	71.43	uncharacterized protein LOC111793815 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023531631.1	1.72e-18	71.43	uncharacterized protein LOC111793815 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0025741 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35110.1	1.6e-06	34.07	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G46490.1	6.2e-06	34.04	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35121:SF8	SUBFAMILY NOT NAMED	coord: 4..89
None	No IPR available	PANTHER	PTHR35121	HOMEODOMAIN PROTEIN 8, PUTATIVE-RELATED	coord: 4..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0025741.1	IVF0025741.1	mRNA