IVF0025702 (gene) Melon (IVF77) v1

Overview


Name	IVF0025702
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Heat shock protein DnaJ, cysteine-rich domain containing protein
Location	chr05: 25674251 .. 25675097 (+)
RNA-Seq Expression	IVF0025702
Synteny	IVF0025702

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATACCGAGGCAATTGCGAACAATCTTCACCGGCGCCGCCGTCATCCTCGGCGGCATTTGCACTCTCAACTTGGCTTCTTTTCTCACTATTCAAACCCTTCGTCTTACTGCTGAAGCCAAACGGGTAATTCTAAACTAAATGTGTATGTTGGAATGAAAGAAGATTCGTAAATTCTGAACCATTTCTTTGATACTATTCTATTGGGTTTTTTGATTTCTCTGCAGAGAAAGATTGCATTGCCCTGTAAAGCTTGTAGAGGAAAAGGATTCTATATATGCAAATTATGCCGAGGAAATGCTGTCATTCAGTGGTCGCCATTGTCTGATCCTATTGCCATGAACCCCTGCGTGTGCCCTACTTGTGAGGGAAACAGGTTATACTTTGACCCCTTTTCATTTGCCCAGGCCTAAATTAATGGCATTTGCATTCTTTTTTATTTACTTAGTAGATTCTCTGTTCATGTCAATTCTTATCCAGATTCTCATGTGGATTATGAAAGTGATGCTGAATCCTAATTATATTTGTGTGTGTTTAGTTTGTTGAGAAAAAGTGAAGAAGGGATAACTCGTCTTAAGTTGAATCAAAACAATCGCTTTAAAAAGTTGAGATTTTAACGCTCTCTCTAATTTGTCCTGTATTGAAATTGACAGATTATAAGCACAAAAGGGTAATTGGTAAAATTTTGCCTATTTCTGTGAAAGTTTTTGGCTGGGCTTATATTCCATTGGTTTATGTTTTCTGCTGGTGATGTGTTTTTTCACTACTGTTGTTTATTTGCTGCATCATTTGATATTGCAGGGTACAACGTTGCCTAAATTGCCTAGGTAAAGGATATGAAGTATGA

mRNA sequence

ATGATACCGAGGCAATTGCGAACAATCTTCACCGGCGCCGCCGTCATCCTCGGCGGCATTTGCACTCTCAACTTGGCTTCTTTTCTCACTATTCAAACCCTTCGTCTTACTGCTGAAGCCAAACGGAGAAAGATTGCATTGCCCTGTAAAGCTTGTAGAGGAAAAGGATTCTATATATGCAAATTATGCCGAGGAAATGCTGTCATTCAGTGGTCGCCATTGTCTGATCCTATTGCCATGAACCCCTGCGTGTGCCCTACTTGTGAGGGAAACAGGGTACAACGTTGCCTAAATTGCCTAGGTAAAGGATATGAAGTATGA

Coding sequence (CDS)

ATGATACCGAGGCAATTGCGAACAATCTTCACCGGCGCCGCCGTCATCCTCGGCGGCATTTGCACTCTCAACTTGGCTTCTTTTCTCACTATTCAAACCCTTCGTCTTACTGCTGAAGCCAAACGGAGAAAGATTGCATTGCCCTGTAAAGCTTGTAGAGGAAAAGGATTCTATATATGCAAATTATGCCGAGGAAATGCTGTCATTCAGTGGTCGCCATTGTCTGATCCTATTGCCATGAACCCCTGCGTGTGCCCTACTTGTGAGGGAAACAGGGTACAACGTTGCCTAAATTGCCTAGGTAAAGGATATGAAGTATGA

Protein sequence

MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV

Homology

[Close]

BLAST of IVF0025702 vs. ExPASy TrEMBL
Match: A0A1S3C6K9 (uncharacterized protein LOC103497424 OS=Cucumis melo OX=3656 GN=LOC103497424 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.5e-55
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC 60
           MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC
Sbjct: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC 60

Query: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 107
           KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV
Sbjct: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 106

[Close]

BLAST of IVF0025702 vs. ExPASy TrEMBL
Match: A0A0A0LI05 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006050 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.2e-54
Identity = 103/106 (97.17%), Postives = 105/106 (99.06%), Query Frame = 0


Query: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC 60
           MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLR+TAEAKRRKI LPCKACRGKGFY+C
Sbjct: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRVTAEAKRRKIGLPCKACRGKGFYMC 60

Query: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 107
           KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV
Sbjct: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 106

[Close]

BLAST of IVF0025702 vs. ExPASy TrEMBL
Match: A0A6J1CNQ8 (uncharacterized protein LOC111012944 OS=Momordica charantia OX=3673 GN=LOC111012944 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.2e-54
Identity = 103/106 (97.17%), Postives = 104/106 (98.11%), Query Frame = 0


Query: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC 60
           MIPRQLRT+FTGAAVILGGICTLN ASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC
Sbjct: 1   MIPRQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC 60

Query: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 107
           KLCRGNAVI WSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV
Sbjct: 61  KLCRGNAVIHWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 106

[Close]

BLAST of IVF0025702 vs. ExPASy TrEMBL
Match: A0A5D3BFD4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00060 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.8e-46
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC 60
          MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC
Sbjct: 1  MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC 60

Query: 61 KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNR 93
          KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNR
Sbjct: 61 KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNR 92

[Close]

BLAST of IVF0025702 vs. ExPASy TrEMBL
Match: A0A6P4BUI7 (uncharacterized protein LOC107435933 OS=Ziziphus jujuba OX=326968 GN=LOC107435933 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.0e-43
Identity = 82/105 (78.10%), Postives = 94/105 (89.52%), Query Frame = 0


Query: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC 60
           MIP+QLRT+ TGAAVILGGI TLNL S  TI TLRL  EAKRRK+ALPC+ C+GKGFYIC
Sbjct: 1   MIPKQLRTMATGAAVILGGIFTLNLVSSATIATLRLATEAKRRKVALPCRVCKGKGFYIC 60

Query: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYE 106
           +LC+GNA IQWSPL DP+A+NPC+CPTC+GNRVQRCLNCLGKGY+
Sbjct: 61  RLCKGNATIQWSPLYDPVAINPCLCPTCDGNRVQRCLNCLGKGYD 105

[Close]

BLAST of IVF0025702 vs. NCBI nr
Match: XP_008457839.1 (PREDICTED: uncharacterized protein LOC103497424 [Cucumis melo])

HSP 1 Score: 224 bits (571), Expect = 5.44e-74
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC 60
           MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC
Sbjct: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC 60

Query: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 106
           KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV
Sbjct: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 106

[Close]

BLAST of IVF0025702 vs. NCBI nr
Match: XP_022142951.1 (uncharacterized protein LOC111012944 [Momordica charantia])

HSP 1 Score: 220 bits (561), Expect = 1.83e-72
Identity = 103/106 (97.17%), Postives = 104/106 (98.11%), Query Frame = 0


Query: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC 60
           MIPRQLRT+FTGAAVILGGICTLN ASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC
Sbjct: 1   MIPRQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC 60

Query: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 106
           KLCRGNAVI WSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV
Sbjct: 61  KLCRGNAVIHWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 106

[Close]

BLAST of IVF0025702 vs. NCBI nr
Match: XP_004139324.1 (uncharacterized protein LOC101203873 [Cucumis sativus] >KGN60659.1 hypothetical protein Csa_019507 [Cucumis sativus])

HSP 1 Score: 220 bits (561), Expect = 1.83e-72
Identity = 103/106 (97.17%), Postives = 105/106 (99.06%), Query Frame = 0


Query: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC 60
           MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLR+TAEAKRRKI LPCKACRGKGFY+C
Sbjct: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRVTAEAKRRKIGLPCKACRGKGFYMC 60

Query: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 106
           KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV
Sbjct: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 106

[Close]

BLAST of IVF0025702 vs. NCBI nr
Match: XP_038889623.1 (uncharacterized protein LOC120079492 [Benincasa hispida])

HSP 1 Score: 219 bits (559), Expect = 3.69e-72
Identity = 102/106 (96.23%), Postives = 105/106 (99.06%), Query Frame = 0


Query: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC 60
           MIP+QLRT+FTGAAVILGGICTLN ASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC
Sbjct: 1   MIPKQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC 60

Query: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 106
           KLC+GNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV
Sbjct: 61  KLCQGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 106

[Close]

BLAST of IVF0025702 vs. NCBI nr
Match: KAG7021261.1 (hypothetical protein SDJN02_17949 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 208 bits (530), Expect = 9.81e-68
Identity = 98/106 (92.45%), Postives = 100/106 (94.34%), Query Frame = 0


Query: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC 60
           M+PRQLRTIFTGAAVI GGI TL  ASFLTIQTLR TAEAKRRKIALPC+ACRGKGFYIC
Sbjct: 1   MVPRQLRTIFTGAAVIFGGIFTLRFASFLTIQTLRHTAEAKRRKIALPCRACRGKGFYIC 60

Query: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEV 106
           KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQ CLNCLGKGYEV
Sbjct: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQHCLNCLGKGYEV 106

[Close]

BLAST of IVF0025702 vs. TAIR 10
Match: AT5G20220.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 42.0 bits (97), Expect = 3.6e-04
Identity = 21/55 (38.18%), Postives = 26/55 (47.27%), Query Frame = 0


Query: 47  LPCKACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLG 102
           LPC  CRG+G+  C  C     I+ S L          CP C+G  +  CL CLG
Sbjct: 90  LPCPTCRGRGYTSCSNCG----IERSRLD---------CPQCKGKGIMTCLRCLG 131

[Close]

BLAST of IVF0025702 vs. TAIR 10
Match: AT5G20220.2 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 42.0 bits (97), Expect = 3.6e-04
Identity = 21/55 (38.18%), Postives = 26/55 (47.27%), Query Frame = 0


Query: 47  LPCKACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLG 102
           LPC  CRG+G+  C  C     I+ S L          CP C+G  +  CL CLG
Sbjct: 90  LPCPTCRGRGYTSCSNCG----IERSRLD---------CPQCKGKGIMTCLRCLG 131

The following BLAST results are available for this feature:

BLAST of IVF0025702 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0025702 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C6K9	1.5e-55	100.00	uncharacterized protein LOC103497424 OS=Cucumis melo OX=3656 GN=LOC103497424 PE=...	[more]
A0A0A0LI05	2.2e-54	97.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006050 PE=4 SV=1	[more]
A0A6J1CNQ8	2.2e-54	97.17	uncharacterized protein LOC111012944 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A5D3BFD4	3.8e-46	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6P4BUI7	1.0e-43	78.10	uncharacterized protein LOC107435933 OS=Ziziphus jujuba OX=326968 GN=LOC10743593...	[more]

BLAST of IVF0025702 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457839.1	5.44e-74	100.00	PREDICTED: uncharacterized protein LOC103497424 [Cucumis melo]	[more]
XP_022142951.1	1.83e-72	97.17	uncharacterized protein LOC111012944 [Momordica charantia]	[more]
XP_004139324.1	1.83e-72	97.17	uncharacterized protein LOC101203873 [Cucumis sativus] >KGN60659.1 hypothetical ...	[more]
XP_038889623.1	3.69e-72	96.23	uncharacterized protein LOC120079492 [Benincasa hispida]	[more]
KAG7021261.1	9.81e-68	92.45	hypothetical protein SDJN02_17949 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of IVF0025702 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20220.1	3.6e-04	38.18	zinc knuckle (CCHC-type) family protein	[more]
AT5G20220.2	3.6e-04	38.18	zinc knuckle (CCHC-type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15852:SF63	BNAA02G17140D PROTEIN	coord: 12..104
None	No IPR available	PANTHER	PTHR15852	PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN	coord: 12..104
IPR036410	Heat shock protein DnaJ, cysteine-rich domain superfamily	SUPERFAMILY	57938	DnaJ/Hsp40 cysteine-rich domain	coord: 44..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0025702.2	IVF0025702.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane