IVF0025667 (gene) Melon (IVF77) v1

Overview


Name	IVF0025667
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Ribosomal protein S14
Location	chr03: 20078307 .. 20081107 (+)
RNA-Seq Expression	IVF0025667
Synteny	IVF0025667

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCGAATTTGTCGGTTCTTCAGCCGATTTCGCTCTCTTCCATCGACCTCAATTCCCTTGTCTGCTCAAACTCGAAGAACTCAAAGGCAGCTACAGCCATTGCAGAGGATTTCAACCCTTGAAGGTAATTCAATCTTCCTTTCGTTCTTCACCCTGTTTTCCACAATGAGTTTTCGCTCTCCGCATTCTAACGGATGAATAAGGATCAACGAGCGCCTGTTTAGATAGTTAGAATCAGCATCTTTCTAGGTTTTGAATTATTATTGAAATTTTGAAATCATGAAATTCGAGAAATTAGGTGAAGCGAAATGTCGGGGGACAAGCGAAACATTCTTGATAATTATCGCCGACAGCTTGCTGCCAAGTTTGAGGTGAAGCGGAATCTTTTCAAAGCCATTTGCAATGATCCGAGTCTTCCCAAAGATGTTCGTGAGGAGCATCGTTATAAGCTGTCGAAGTTGCCAAGAAATAGTTCGTTCACTCGATTGAGGAATCGCTGCATTTTCACCGGTCGACCTAGGGGTGTCTACCAGCTTTTCCGTATGTCTCGTATCGTTTTCCGTGAACTGGCGAAGAAAGGTCTTGTAATGGGTGTCAAGAAAGCTTCTTGGTAGATATTGGTATGAAATTATTCTCAACTATACTCTTATCCAAAAACAAAAGTTCTTCACTATCTATGTTCAGGGTATGAAAATGAAGGCAGCGATAAGATGTGTGTGTGTGTGTTTGTTGTATATGTGGTTAGGCTCCACTTATATAGTGTTGATACGTGTTTATGATAAACGGGCTGGCTTAACGATAGGCTAGACTAGTAATCATTGTCTTGGAAACATTGTCTGAGATGGGTTGGCCATGATTATTTGTTCTCCTTTATGGACATACTCTGCCAGTGAAAGCTTGATTTTATTCTATCGCCAGTGAAATTGATTATGATAATCCATTGGTTCATTACTCACCGTGCAAAACAGTAACATTGGAGTCTGTTAGCTTAGCCGTTCTTACTAGAAGCTGCGGTATTTTCCTTTAAAAGTAAGATTCAGTTGCTGGGTAGATTTATGTTTGCTGATTACAGTTTTAACTAGTTAGGTTCAGTGATAAGGAGAGGGATATTTGCTAGTTCAAATCTACAGATCTGAATTTCTCTGTAGTTTTCTCCCACCATAGCACTAGAAGTAAGTGTTGTACAATATTCTTAAAGCTTTTTATTTTTAAGATATATACGAACCAGCTGTTAGAGTATGTATAACTTGGTTCCAATATTCTTTATATTTTCTCCAGTTCTATAAGAAGATTTCTCAACCTCACCAAAGTGAGGTTGGCTTGATGGTATTGGTATGACCTCCATCCCTCTAGGTCGGAGGTTCAATCCTATAACCCCCAGTTTTTGTACTAAAAAAAAAAGATATCTCACCCTCTTTTTGTTATCATTTGGGGTATTTGGCTGGAGCCTAATGGTAATAATACTATAATGGGATCTTTGGTTGAAAGGTCGTGTGGCTGAGGTTTGGGAGTTTGCTAGATTTATTGCCTCCTTTGAGTGTGCATCTATTAGACCCCCGATATTACATACATATAAGAAAAGGGGCAGAAAAGGGATTTGACAGTGCTGATGGTAATTCAGGGAGCAGAGAGAAAGAAAACAACACTGAGGGCCCACTTTGGGAATTGAGTATTTACAGAGAATGTTTTGGGGATAGCTGTTTTAGGTTTTCTTTTTAGGTGAAAGCTTACATAGCCTTCATAGGAGAAGTTTCCAGCCTTCTCAAAGGAGCTGGTTATTATTCTTGTTATTTACTGTTTTCTGGACTGTTGGTATAAGTTTGTGATACATTTTGATTTCTATTATCAATATAGTATAACAGAGTGCTGCCTTTGTTTTGTCTTGTTGGGAATTTTCTGGGTTTCAGGTTAAGAATCCTAACAGCATCACTGGGTCTTTTTGTATTTACGATCTTGGTTTGATTTTGTTGGATTGGAGTTCTTTCATGTAGTTTGTTATTGGGCTTCTTCTTTTTTTCGGGTTCATTCTTTTTAGAAAAATACTTAGGTGCATTCCAGGGTGTACATATTTTTGTGCATCCCACCAAATTGTCCTATCATAACGTTACATGTGGAAATATTTTAAAATATTTTAATTACATTTTTGGTGGGGTGATAGGGGAGGGAAGCATAGAGATGGTGCATCTTGGGATGCACCTACTTGCCCTTCTTTTTATGTCTTTGTAATTATCTCATATTTTTCTAAAAAGAAAAGGTCTTCTCCTCCCTAAATCAACTAAGAAAATTTCAACACTCTGTATATTTATCTTGCTATAATAAGAATTCTTTTTCTATTGCGGAGAAAGTAACTTGGAATACGTAATTCATGTGCTATCTTAAGCTCAACTACATTCTTCTTATTTATCTGCAATGGTGTAATTAGCGGTGATCCATTTCAATCATAAATACAAGGCATGTAGATGCTGTAGTCACTGAAGTATTGTGGTTATTTTAGGTGTCGTTTTGATTGGTCTTGTTTTTCGCTGACTCGTTTAATTGTGTATCATGTGCAGATTGATGGTAGAGACTTTTGTCGTTGTGGCCAGCGGGAATTAAACATATGCTCTGAAAAATGTAATATTAATTTAAATTCCTTGGACATGATCCATGCCAAAGAAGAGCAAAGGCTTTACTTTTACTATTCAATAAGTGTTTTGTCTTAGACAGTTAAGAATTGTGTTGTATTTTTCTGATAGTTACCATTTCCTTTTCCCCTACCATTTAGTTGGTTGCACTCTCCCTGCTTATCTGCTACTTACCCTC

mRNA sequence

CGCGAATTTGTCGGTTCTTCAGCCGATTTCGCTCTCTTCCATCGACCTCAATTCCCTTGTCTGCTCAAACTCGAAGAACTCAAAGGCAGCTACAGCCATTGCAGAGGATTTCAACCCTTGAAGGTGAAGCGAAATGTCGGGGGACAAGCGAAACATTCTTGATAATTATCGCCGACAGCTTGCTGCCAAGTTTGAGGTGAAGCGGAATCTTTTCAAAGCCATTTGCAATGATCCGAGTCTTCCCAAAGATGTTCGTGAGGAGCATCGTTATAAGCTGTCGAAGTTGCCAAGAAATAGTTCGTTCACTCGATTGAGGAATCGCTGCATTTTCACCGGTCGACCTAGGGGTGTCTACCAGCTTTTCCGTATGTCTCGTATCGTTTTCCGTGAACTGGCGAAGAAAGGTCTTGTAATGGGTGTCAAGAAAGCTTCTTGGTAGATATTGATTGATGGTAGAGACTTTTGTCGTTGTGGCCAGCGGGAATTAAACATATGCTCTGAAAAATGTAATATTAATTTAAATTCCTTGGACATGATCCATGCCAAAGAAGAGCAAAGGCTTTACTTTTACTATTCAATAAGTGTTTTGTCTTAGACAGTTAAGAATTGTGTTGTATTTTTCTGATAGTTACCATTTCCTTTTCCCCTACCATTTAGTTGGTTGCACTCTCCCTGCTTATCTGCTACTTACCCTC

Coding sequence (CDS)

ATGTCGGGGGACAAGCGAAACATTCTTGATAATTATCGCCGACAGCTTGCTGCCAAGTTTGAGGTGAAGCGGAATCTTTTCAAAGCCATTTGCAATGATCCGAGTCTTCCCAAAGATGTTCGTGAGGAGCATCGTTATAAGCTGTCGAAGTTGCCAAGAAATAGTTCGTTCACTCGATTGAGGAATCGCTGCATTTTCACCGGTCGACCTAGGGGTGTCTACCAGCTTTTCCGTATGTCTCGTATCGTTTTCCGTGAACTGGCGAAGAAAGGTCTTGTAATGGGTGTCAAGAAAGCTTCTTGGTAG

Protein sequence

MSGDKRNILDNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRLRNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW

Homology

[Close]

BLAST of IVF0025667 vs. ExPASy Swiss-Prot
Match: P14875 (Ribosomal protein S14, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPS14 PE=3 SV=2)

HSP 1 Score: 146.7 bits (369), Expect = 1.4e-34
Identity = 67/98 (68.37%), Postives = 84/98 (85.71%), Query Frame = 0


Query: 4   DKRNILDNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRLRNR 63
           +KRNI D+ RR LA K+E++R L+KA CNDP+LP D+R++HRYKLSKLPRNSSF R+RNR
Sbjct: 2   EKRNIRDHKRRLLATKYELRRKLYKAFCNDPALPSDMRDKHRYKLSKLPRNSSFARVRNR 61

Query: 64  CIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 102
           CI TGRPR VY+ FR+SRIVFR LA +G +MG+KK+SW
Sbjct: 62  CISTGRPRSVYEFFRISRIVFRGLASRGPLMGIKKSSW 99

[Close]

BLAST of IVF0025667 vs. ExPASy Swiss-Prot
Match: P05716 (Ribosomal protein S14, mitochondrial OS=Vicia faba OX=3906 GN=RPS14 PE=3 SV=2)

HSP 1 Score: 140.6 bits (353), Expect = 9.9e-33
Identity = 66/98 (67.35%), Postives = 82/98 (83.67%), Query Frame = 0


Query: 4   DKRNILDNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRLRNR 63
           +KRNI D+ RR LAAK+E++R L+KA C D  LP D+R++ RYKLSKLPRNSSF R+RNR
Sbjct: 3   EKRNIRDHKRRLLAAKYELRRKLYKAFCKDSDLPSDMRDKLRYKLSKLPRNSSFARVRNR 62

Query: 64  CIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 102
           CI TGRPR VY+LFR+SRIVFR LA +G +MG+KK+SW
Sbjct: 63  CISTGRPRSVYELFRISRIVFRSLASRGPLMGIKKSSW 100

[Close]

BLAST of IVF0025667 vs. ExPASy Swiss-Prot
Match: P49387 (Ribosomal protein S14, mitochondrial OS=Brassica napus OX=3708 GN=RPS14 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 8.3e-32
Identity = 64/98 (65.31%), Postives = 80/98 (81.63%), Query Frame = 0


Query: 4   DKRNILDNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRLRNR 63
           +K+N  D+ RR LAAKFE++R L+KA C DP LP D+R++HRYKLSKLPRNSSF R+RNR
Sbjct: 3   EKQNSRDHKRRLLAAKFELRRKLYKAFCKDPDLPSDMRDKHRYKLSKLPRNSSFARVRNR 62

Query: 64  CIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 102
           CI TGRPR V + FR+ RIVFR LA +G +MG+KK+SW
Sbjct: 63  CISTGRPRSVSEFFRIYRIVFRGLASRGSLMGIKKSSW 100

[Close]

BLAST of IVF0025667 vs. ExPASy Swiss-Prot
Match: P26873 (Ribosomal protein S14, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS14 PE=3 SV=2)

HSP 1 Score: 126.3 bits (316), Expect = 1.9e-28
Identity = 61/94 (64.89%), Postives = 76/94 (80.85%), Query Frame = 0


Query: 8   ILDNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRLRNRCIFT 67
           I D+ RR L AK+E+KR  +KAIC D +LP  +R E+ +KLSKLPRNSS TR+RNRCIFT
Sbjct: 6   IRDHKRRLLVAKYELKRMHYKAICQDRNLPNKIRYEYFFKLSKLPRNSSKTRVRNRCIFT 65

Query: 68  GRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 102
           GRPR VY+LFR+SRIVFRELA KG ++G+ K+ W
Sbjct: 66  GRPRSVYKLFRISRIVFRELASKGSLIGINKSCW 99

[Close]

BLAST of IVF0025667 vs. ExPASy Swiss-Prot
Match: B1Z780 (30S ribosomal protein S14 OS=Methylorubrum populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) OX=441620 GN=rpsN PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.1e-18
Identity = 45/92 (48.91%), Postives = 61/92 (66.30%), Query Frame = 0


Query: 10  DNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRLRNRCIFTGR 69
           +N+R++L  +F  KR    AI ND S   + R E R KL++LPRNSS TR+RNRC  TGR
Sbjct: 10  NNHRKELVKRFAEKRKALLAIANDESREMEERFEARLKLAELPRNSSATRIRNRCEMTGR 69

Query: 70  PRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 102
           PR  Y+   +SR+  REL  +GL+ G+ K+SW
Sbjct: 70  PRAYYRKLGISRVALRELGNRGLIPGLVKSSW 101

[Close]

BLAST of IVF0025667 vs. ExPASy TrEMBL
Match: A0A5D3CKB3 (Ribosomal protein S14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00590 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 9.2e-50
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MSGDKRNILDNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRL 60
           MSGDKRNILDNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRL
Sbjct: 1   MSGDKRNILDNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 102
           RNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW
Sbjct: 61  RNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 101

[Close]

BLAST of IVF0025667 vs. ExPASy TrEMBL
Match: A0A1S4E169 (ribosomal protein S14, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103496488 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 9.2e-50
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MSGDKRNILDNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRL 60
           MSGDKRNILDNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRL
Sbjct: 1   MSGDKRNILDNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 102
           RNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW
Sbjct: 61  RNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 101

[Close]

BLAST of IVF0025667 vs. ExPASy TrEMBL
Match: A0A0A0LSR8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G386130 PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.0e-48
Identity = 98/101 (97.03%), Postives = 100/101 (99.01%), Query Frame = 0


Query: 1   MSGDKRNILDNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRL 60
           MSGDKRNILDNYRRQLAAKFE+KRNLFKAICNDPSLPKD+REEHR KLSKLPRNSSFTRL
Sbjct: 1   MSGDKRNILDNYRRQLAAKFELKRNLFKAICNDPSLPKDIREEHRNKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 102
           RNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW
Sbjct: 61  RNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 101

[Close]

BLAST of IVF0025667 vs. ExPASy TrEMBL
Match: A0A6J1FKA4 (uncharacterized protein LOC111444996 OS=Cucurbita moschata OX=3662 GN=LOC111444996 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 5.8e-44
Identity = 88/101 (87.13%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   MSGDKRNILDNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRL 60
           M+ DKRNILD+YRRQLAAKFE+KR L+KA+CNDPSLP DVREEHRYKLSKLPRNSSFTRL
Sbjct: 1   MTEDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 102
           RNRCIFTGRPRGVYQLFR+SRIVFR+LA KGL+MGVKK+SW
Sbjct: 61  RNRCIFTGRPRGVYQLFRVSRIVFRDLASKGLIMGVKKSSW 101

[Close]

BLAST of IVF0025667 vs. ExPASy TrEMBL
Match: A0A6J1C264 (uncharacterized protein LOC111006733 OS=Momordica charantia OX=3673 GN=LOC111006733 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.3e-43
Identity = 88/101 (87.13%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   MSGDKRNILDNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRL 60
           MSGDKRNILD+YRRQLAAKFE+KR L+KA+CNDPSLP DVREE RYKLSKLPRNSSFTRL
Sbjct: 1   MSGDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEQRYKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 102
           RNRCIFTGRPR VYQLFR+SRIVFR+LA KGL+MGVKK+SW
Sbjct: 61  RNRCIFTGRPRAVYQLFRVSRIVFRDLASKGLIMGVKKSSW 101

[Close]

BLAST of IVF0025667 vs. NCBI nr
Match: XP_016901971.1 (PREDICTED: ribosomal protein S14, mitochondrial [Cucumis melo] >TYK11742.1 ribosomal protein S14 [Cucumis melo var. makuwa])

HSP 1 Score: 203 bits (516), Expect = 9.30e-66
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MSGDKRNILDNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRL 60
           MSGDKRNILDNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRL
Sbjct: 1   MSGDKRNILDNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 101
           RNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW
Sbjct: 61  RNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 101

[Close]

BLAST of IVF0025667 vs. NCBI nr
Match: XP_011649873.1 (uncharacterized protein LOC101216688 [Cucumis sativus] >KGN63046.1 hypothetical protein Csa_022463 [Cucumis sativus])

HSP 1 Score: 198 bits (503), Expect = 8.96e-64
Identity = 98/101 (97.03%), Postives = 100/101 (99.01%), Query Frame = 0


Query: 1   MSGDKRNILDNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRL 60
           MSGDKRNILDNYRRQLAAKFE+KRNLFKAICNDPSLPKD+REEHR KLSKLPRNSSFTRL
Sbjct: 1   MSGDKRNILDNYRRQLAAKFELKRNLFKAICNDPSLPKDIREEHRNKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 101
           RNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW
Sbjct: 61  RNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 101

[Close]

BLAST of IVF0025667 vs. NCBI nr
Match: KAG7032953.1 (Ribosomal protein S14, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 185 bits (469), Expect = 1.38e-58
Identity = 89/101 (88.12%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   MSGDKRNILDNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRL 60
           M+ DKRNILD+YRRQLAAKFE+KR LFKA+CNDPSLP DVREEHRYKLSKLPRNSSFTRL
Sbjct: 1   MTEDKRNILDHYRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 101
           RNRCIFTGRPRGVYQLFR+SRIVFR+LA KGL+MGVKK+SW
Sbjct: 61  RNRCIFTGRPRGVYQLFRVSRIVFRDLASKGLIMGVKKSSW 101

[Close]

BLAST of IVF0025667 vs. NCBI nr
Match: XP_023550870.1 (uncharacterized protein LOC111808878 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 184 bits (467), Expect = 2.78e-58
Identity = 89/101 (88.12%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   MSGDKRNILDNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRL 60
           M+ DKRNILD+YRRQLAAKFE+KR L+KA+CNDPSLP DVREEHRYKLSKLPRNSSFTRL
Sbjct: 1   MTEDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 101
           RNRCIFTGRPRGVYQLFR+SRIVFR+LA KGLVMGVKK+SW
Sbjct: 61  RNRCIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 101

[Close]

BLAST of IVF0025667 vs. NCBI nr
Match: XP_022938933.1 (uncharacterized protein LOC111444996 [Cucurbita moschata] >XP_022938934.1 uncharacterized protein LOC111444996 [Cucurbita moschata] >KAG7016311.1 Ribosomal protein S14, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 184 bits (466), Expect = 3.95e-58
Identity = 88/101 (87.13%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   MSGDKRNILDNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRL 60
           M+ DKRNILD+YRRQLAAKFE+KR L+KA+CNDPSLP DVREEHRYKLSKLPRNSSFTRL
Sbjct: 1   MTEDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 101
           RNRCIFTGRPRGVYQLFR+SRIVFR+LA KGL+MGVKK+SW
Sbjct: 61  RNRCIFTGRPRGVYQLFRVSRIVFRDLASKGLIMGVKKSSW 101

[Close]

BLAST of IVF0025667 vs. TAIR 10
Match: AT2G34520.1 (mitochondrial ribosomal protein S14 )

HSP 1 Score: 136.3 bits (342), Expect = 1.3e-32
Identity = 63/99 (63.64%), Postives = 81/99 (81.82%), Query Frame = 0


Query: 3   GDKRNILDNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRLRN 62
           G KRN  D+ RR LAA+FE++R L+KA C DP LP ++R+++RYKLSKLPRNS+F R+RN
Sbjct: 66  GVKRNSADHRRRLLAARFELRRKLYKAFCKDPDLPSEMRDKNRYKLSKLPRNSAFARIRN 125

Query: 63  RCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 102
           RC+FTGR R V +LFR+SRIVFR LA KG +MG+ K+SW
Sbjct: 126 RCVFTGRSRSVTELFRVSRIVFRGLASKGALMGITKSSW 164

[Close]

BLAST of IVF0025667 vs. TAIR 10
Match: ATCG00330.1 (chloroplast ribosomal protein S14 )

HSP 1 Score: 54.7 bits (130), Expect = 5.1e-08
Identity = 34/90 (37.78%), Postives = 52/90 (57.78%), Query Frame = 0


Query: 13  RRQLAAKFE-VKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRLRNRCIFTGRPR 72
           R++L  K+  ++R+  K I   PSL +  + +   KL   PRNS+ TRL  RC  TGRPR
Sbjct: 13  RQKLEKKYHLIRRSSKKEISKIPSLSE--KWKIHGKLQSPPRNSAPTRLHRRCFSTGRPR 72

Query: 73  GVYQLFRMSRIVFRELAKKGLVMGVKKASW 102
             Y+ F +S  + RE+ +  L+ G  ++SW
Sbjct: 73  ANYRDFGLSGHILREMVQACLLPGATRSSW 100

The following BLAST results are available for this feature:

BLAST of IVF0025667 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P14875	1.4e-34	68.37	Ribosomal protein S14, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPS14 PE...	[more]
P05716	9.9e-33	67.35	Ribosomal protein S14, mitochondrial OS=Vicia faba OX=3906 GN=RPS14 PE=3 SV=2	[more]
P49387	8.3e-32	65.31	Ribosomal protein S14, mitochondrial OS=Brassica napus OX=3708 GN=RPS14 PE=3 SV=...	[more]
P26873	1.9e-28	64.89	Ribosomal protein S14, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS14 P...	[more]
B1Z780	3.1e-18	48.91	30S ribosomal protein S14 OS=Methylorubrum populi (strain ATCC BAA-705 / NCIMB 1...	[more]

BLAST of IVF0025667 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CKB3	9.2e-50	100.00	Ribosomal protein S14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold30...	[more]
A0A1S4E169	9.2e-50	100.00	ribosomal protein S14, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103496488 PE=...	[more]
A0A0A0LSR8	3.0e-48	97.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G386130 PE=3 SV=1	[more]
A0A6J1FKA4	5.8e-44	87.13	uncharacterized protein LOC111444996 OS=Cucurbita moschata OX=3662 GN=LOC1114449...	[more]
A0A6J1C264	1.3e-43	87.13	uncharacterized protein LOC111006733 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]

BLAST of IVF0025667 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901971.1	9.30e-66	100.00	PREDICTED: ribosomal protein S14, mitochondrial [Cucumis melo] >TYK11742.1 ribos...	[more]
XP_011649873.1	8.96e-64	97.03	uncharacterized protein LOC101216688 [Cucumis sativus] >KGN63046.1 hypothetical ...	[more]
KAG7032953.1	1.38e-58	88.12	Ribosomal protein S14, mitochondrial, partial [Cucurbita argyrosperma subsp. arg...	[more]
XP_023550870.1	2.78e-58	88.12	uncharacterized protein LOC111808878 [Cucurbita pepo subsp. pepo]	[more]
XP_022938933.1	3.95e-58	87.13	uncharacterized protein LOC111444996 [Cucurbita moschata] >XP_022938934.1 unchar...	[more]

BLAST of IVF0025667 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34520.1	1.3e-32	63.64	mitochondrial ribosomal protein S14	[more]
ATCG00330.1	5.1e-08	37.78	chloroplast ribosomal protein S14	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.287.1480		coord: 3..91 e-value: 4.4E-33 score: 115.5
None	No IPR available	PANTHER	PTHR19836:SF30	RIBOSOMAL PROTEIN S14	coord: 3..101
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 8..101
IPR001209	Ribosomal protein S14	PFAM	PF00253	Ribosomal_S14	coord: 47..100 e-value: 1.1E-25 score: 89.1
IPR001209	Ribosomal protein S14	PANTHER	PTHR19836	30S RIBOSOMAL PROTEIN S14	coord: 3..101
IPR018271	Ribosomal protein S14, conserved site	PROSITE	PS00527	RIBOSOMAL_S14	coord: 63..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0025667.2	IVF0025667.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0015935	small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome