IVF0025566 (gene) Melon (IVF77) v1

Overview


Name	IVF0025566
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein Tat like
Location	chr04: 1198895 .. 1199568 (+)
RNA-Seq Expression	IVF0025566
Synteny	IVF0025566

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCCTAATTTGGATCTGTTAGCTCTTGCTTGCCTCTATGGTTCCTTCATAGCTCTAATTCTCCTCCTCGTCATCTTCTTCCTCTTGATTGTGCTGTTTCTATCATCTTCCCTGGCTCTGTTTTCAGTATTTGTGAGTGACTTGTATGATGCCTACTCAGTTATGAGTCTGTACTATGAAGACGTGAAAGCTGAAATTGAATTGGGTTTAAGTTTAATTATGTTTGGAGTAATGGGGTTTGGTGTTGATGTTGTTTTGCGTACAAAATCTCTTCTCCGACAGCAAAATCTAATATTGAAAAACATAAGGCAACAACAGATGAAGGTAAAAGAAAAATGGAGGTTTGAGTTTGGCATGCTTGAGGAGCTATGAATGTTGTTCACCCTTACTTTTCAGAAAACTCTCTTCTCAGTAATAATGATCCTCGTGCTTCACCTGATTCTCTGCCTTCTGTTGCCATCATCGTCTTTTTCCTTTCTCAAATTATGGAGCTAACAACAACAAACATGGTGCCATTACATCAATTTCAACTTCTGTTCTTTTGTTGTACATCCAATTATTTTGTTAGGATAGGGAAAATAAAGGGCCAATTTTTATTTTTTATTTTTTAAAAAAATTCTTGTACCTAATTAAATGTTACCTTTTTTCTTATATATATATATATTTGTGGC

mRNA sequence

ATGGTTCCTAATTTGGATCTGTTAGCTCTTGCTTGCCTCTATGGTTCCTTCATAGCTCTAATTCTCCTCCTCGTCATCTTCTTCCTCTTGATTGTGCTGTTTCTATCATCTTCCCTGGCTCTGTTTTCAGTATTTGTGAGTGACTTGTATGATGCCTACTCAGTTATGAGTCTGTACTATGAAGACGTGAAAGCTGAAATTGAATTGGGTTTAAGTTTAATTATGTTTGGAGTAATGGGGTTTGGTGTTGATGTTGTTTTGCGTACAAAATCTCTTCTCCGACAGCAAAATCTAATATTGAAAAACATAAGGCAACAACAGATGAAGGTAAAAGAAAAATGGAGGTTTGAGTTTGGCATGCTTGAGGAGCTATGAATGTTGTTCACCCTTACTTTTCAGAAAACTCTCTTCTCAGTAATAATGATCCTCGTGCTTCACCTGATTCTCTGCCTTCTGTTGCCATCATCGTCTTTTTCCTTTCTCAAATTATGGAGCTAACAACAACAAACATGGTGCCATTACATCAATTTCAACTTCTGTTCTTTTGTTGTACATCCAATTATTTTGTTAGGATAGGGAAAATAAAGGGCCAATTTTTATTTTTTATTTTTTAAAAAAATTCTTGTACCTAATTAAATGTTACCTTTTTTCTTATATATATATATATTTGTGGC

Coding sequence (CDS)

ATGGTTCCTAATTTGGATCTGTTAGCTCTTGCTTGCCTCTATGGTTCCTTCATAGCTCTAATTCTCCTCCTCGTCATCTTCTTCCTCTTGATTGTGCTGTTTCTATCATCTTCCCTGGCTCTGTTTTCAGTATTTGTGAGTGACTTGTATGATGCCTACTCAGTTATGAGTCTGTACTATGAAGACGTGAAAGCTGAAATTGAATTGGGTTTAAGTTTAATTATGTTTGGAGTAATGGGGTTTGGTGTTGATGTTGTTTTGCGTACAAAATCTCTTCTCCGACAGCAAAATCTAATATTGAAAAACATAAGGCAACAACAGATGAAGGTAAAAGAAAAATGGAGGTTTGAGTTTGGCATGCTTGAGGAGCTATGA

Protein sequence

MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYYEDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLLRQQNLILKNIRQQQMKVKEKWRFEFGMLEEL

Homology

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BLAST of IVF0025566 vs. ExPASy TrEMBL
Match: A0A5A7TB69 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005000 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.1e-52
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY 60
           MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY
Sbjct: 1   MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY 60

Query: 61  EDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLLRQQNLILKNIRQQQMKVKEKWRFEFGM 120
           EDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLLRQQNLILKNIRQQQMKVKEKWRFEFGM
Sbjct: 61  EDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLLRQQNLILKNIRQQQMKVKEKWRFEFGM 120

Query: 121 LEEL 125
           LEEL
Sbjct: 121 LEEL 124

[Close]

BLAST of IVF0025566 vs. ExPASy TrEMBL
Match: A0A0A0LJX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895720 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.4e-47
Identity = 115/124 (92.74%), Postives = 118/124 (95.16%), Query Frame = 0


Query: 1   MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY 60
           MVPNLDLLALACLYGSFIALILLL+IFFLLIVLFLSSSLALFSVFVSDL+DAYSVMSLYY
Sbjct: 1   MVPNLDLLALACLYGSFIALILLLIIFFLLIVLFLSSSLALFSVFVSDLFDAYSVMSLYY 60

Query: 61  EDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLLRQQNLILKNIRQQQMKVKEKWRFEFGM 120
           EDVKAEIELGLSLI+FGVMGFGVDVVL TKSLLRQQNL LKNIRQQQMK KE WR  FGM
Sbjct: 61  EDVKAEIELGLSLIVFGVMGFGVDVVLYTKSLLRQQNLRLKNIRQQQMKFKENWRLGFGM 120

Query: 121 LEEL 125
           LEEL
Sbjct: 121 LEEL 124

[Close]

BLAST of IVF0025566 vs. ExPASy TrEMBL
Match: A0A6A1UX23 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR8G014171 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 2.0e-09
Identity = 50/108 (46.30%), Postives = 77/108 (71.30%), Query Frame = 0


Query: 1   MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY 60
           M+PNLDLL LA LYGSFIA +LL V+  +L+ L L+ S+ LFS+ V DL+  +SV SL+Y
Sbjct: 1   MIPNLDLLLLAFLYGSFIACVLLAVLSVILLSLCLAFSVTLFSIVVIDLHYVFSVCSLHY 60

Query: 61  EDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLLRQQNLILKNIRQQQM 109
             +KA ++LG  LI++ +M + V +VL +K+ L Q+   + NIR++++
Sbjct: 61  ITLKANLQLGSVLILYIIMRYSVPMVLASKASLEQK---IYNIRKKRL 105

[Close]

BLAST of IVF0025566 vs. ExPASy TrEMBL
Match: A0A2R6QZJ5 (Protein Tat like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc12507 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 3.3e-09
Identity = 46/93 (49.46%), Postives = 68/93 (73.12%), Query Frame = 0


Query: 1  MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY 60
          MVPNLDL+ LA L+GSFI+ ILLLVIF  LI L L+ S+ALFS+ + D Y  +S++SLY+
Sbjct: 1  MVPNLDLILLAFLHGSFISCILLLVIFLTLICLLLAFSIALFSIVLIDSYHIFSLVSLYF 60

Query: 61 EDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLL 94
            ++A +E+G ++ +F +M F V+  L +K L+
Sbjct: 61 GTLRANVEMGFAIGVFTLMHFMVNAALDSKPLV 93

[Close]

BLAST of IVF0025566 vs. ExPASy TrEMBL
Match: A0A4S4DYY3 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_013584 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 9.7e-09
Identity = 42/90 (46.67%), Postives = 65/90 (72.22%), Query Frame = 0


Query: 1  MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY 60
          MVPNLDL+ +A L+GSFI+ ILL+  F +LI L L+ S+ LFS+ + D YD +S++SLY+
Sbjct: 1  MVPNLDLILIAVLHGSFISCILLVFTFLMLICLLLAFSITLFSIVIIDSYDVFSMISLYF 60

Query: 61 EDVKAEIELGLSLIMFGVMGFGVDVVLRTK 91
            ++A +ELG  L++F ++ F V+  L +K
Sbjct: 61 GTLRANVELGFVLVLFTLLHFMVNAGLASK 90

[Close]

BLAST of IVF0025566 vs. NCBI nr
Match: KAA0038615.1 (hypothetical protein E6C27_scaffold92G001450 [Cucumis melo var. makuwa] >TYK31214.1 hypothetical protein E5676_scaffold455G005000 [Cucumis melo var. makuwa])

HSP 1 Score: 210 bits (535), Expect = 6.35e-68
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY 60
           MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY
Sbjct: 1   MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY 60

Query: 61  EDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLLRQQNLILKNIRQQQMKVKEKWRFEFGM 120
           EDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLLRQQNLILKNIRQQQMKVKEKWRFEFGM
Sbjct: 61  EDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLLRQQNLILKNIRQQQMKVKEKWRFEFGM 120

Query: 121 LEEL 124
           LEEL
Sbjct: 121 LEEL 124

[Close]

BLAST of IVF0025566 vs. NCBI nr
Match: KGN60326.1 (hypothetical protein Csa_001171 [Cucumis sativus])

HSP 1 Score: 192 bits (489), Expect = 6.54e-61
Identity = 115/124 (92.74%), Postives = 118/124 (95.16%), Query Frame = 0


Query: 1   MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY 60
           MVPNLDLLALACLYGSFIALILLL+IFFLLIVLFLSSSLALFSVFVSDL+DAYSVMSLYY
Sbjct: 1   MVPNLDLLALACLYGSFIALILLLIIFFLLIVLFLSSSLALFSVFVSDLFDAYSVMSLYY 60

Query: 61  EDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLLRQQNLILKNIRQQQMKVKEKWRFEFGM 120
           EDVKAEIELGLSLI+FGVMGFGVDVVL TKSLLRQQNL LKNIRQQQMK KE WR  FGM
Sbjct: 61  EDVKAEIELGLSLIVFGVMGFGVDVVLYTKSLLRQQNLRLKNIRQQQMKFKENWRLGFGM 120

Query: 121 LEEL 124
           LEEL
Sbjct: 121 LEEL 124

[Close]

BLAST of IVF0025566 vs. NCBI nr
Match: KAG7024618.1 (hypothetical protein SDJN02_13436, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 126 bits (317), Expect = 3.85e-33
Identity = 82/120 (68.33%), Postives = 96/120 (80.00%), Query Frame = 0


Query: 1   MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY 60
           MVP+LDL+ALACLYG FIAL LLL+I  LL+V FLS++LALFSVFV DLYDAYSV+  YY
Sbjct: 136 MVPSLDLIALACLYGCFIALTLLLLISSLLVVFFLSATLALFSVFVGDLYDAYSVLCPYY 195

Query: 61  EDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLLRQQNLILKNIRQQQMKVKEKWRFEFGM 120
           E++KAE ELG+ L+M+GVMGFGVDVVL  KSL RQQNL    +R  QMK KEK    FG+
Sbjct: 196 EELKAETELGVCLMMYGVMGFGVDVVLGIKSLFRQQNLRF-TVRLPQMKGKEKRWLGFGL 254

[Close]

BLAST of IVF0025566 vs. NCBI nr
Match: KAG6591737.1 (putative beta-1,4-xylosyltransferase IRX9H, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 126 bits (317), Expect = 5.77e-31
Identity = 82/120 (68.33%), Postives = 96/120 (80.00%), Query Frame = 0


Query: 1   MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY 60
           MVP+LDL+ALACLYG FIAL LLL+I  LL+V FLS++LALFSVFV DLYDAYSV+  YY
Sbjct: 525 MVPSLDLIALACLYGCFIALTLLLLISSLLVVFFLSATLALFSVFVGDLYDAYSVLCPYY 584

Query: 61  EDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLLRQQNLILKNIRQQQMKVKEKWRFEFGM 120
           E++KAE ELG+ L+M+GVMGFGVDVVL  KSL RQQNL    +R  QMK KEK    FG+
Sbjct: 585 EELKAETELGVCLMMYGVMGFGVDVVLGIKSLFRQQNLRF-TVRLPQMKGKEKRWLGFGL 643

[Close]

BLAST of IVF0025566 vs. NCBI nr
Match: KAB1204378.1 (hypothetical protein CJ030_MR8G014171 [Morella rubra])

HSP 1 Score: 67.8 bits (164), Expect = 1.18e-11
Identity = 50/108 (46.30%), Postives = 77/108 (71.30%), Query Frame = 0


Query: 1   MVPNLDLLALACLYGSFIALILLLVIFFLLIVLFLSSSLALFSVFVSDLYDAYSVMSLYY 60
           M+PNLDLL LA LYGSFIA +LL V+  +L+ L L+ S+ LFS+ V DL+  +SV SL+Y
Sbjct: 1   MIPNLDLLLLAFLYGSFIACVLLAVLSVILLSLCLAFSVTLFSIVVIDLHYVFSVCSLHY 60

Query: 61  EDVKAEIELGLSLIMFGVMGFGVDVVLRTKSLLRQQNLILKNIRQQQM 108
             +KA ++LG  LI++ +M + V +VL +K+ L Q+   + NIR++++
Sbjct: 61  ITLKANLQLGSVLILYIIMRYSVPMVLASKASLEQK---IYNIRKKRL 105

The following BLAST results are available for this feature:

BLAST of IVF0025566 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0025566 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TB69	1.1e-52	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LJX1	2.4e-47	92.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895720 PE=4 SV=1	[more]
A0A6A1UX23	2.0e-09	46.30	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR8G014171 PE=4 SV=1	[more]
A0A2R6QZJ5	3.3e-09	49.46	Protein Tat like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc12...	[more]
A0A4S4DYY3	9.7e-09	46.67	Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_0135...	[more]

BLAST of IVF0025566 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0038615.1	6.35e-68	100.00	hypothetical protein E6C27_scaffold92G001450 [Cucumis melo var. makuwa] >TYK3121...	[more]
KGN60326.1	6.54e-61	92.74	hypothetical protein Csa_001171 [Cucumis sativus]	[more]
KAG7024618.1	3.85e-33	68.33	hypothetical protein SDJN02_13436, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6591737.1	5.77e-31	68.33	putative beta-1,4-xylosyltransferase IRX9H, partial [Cucurbita argyrosperma subs...	[more]
KAB1204378.1	1.18e-11	46.30	hypothetical protein CJ030_MR8G014171 [Morella rubra]	[more]

BLAST of IVF0025566 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0025566.1	IVF0025566.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane