IVF0025523 (gene) Melon (IVF77) v1

Overview


Name	IVF0025523
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Autophagy-related protein
Location	chr06: 25011692 .. 25013894 (+)
RNA-Seq Expression	IVF0025523
Synteny	IVF0025523

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAATCGTACAATCGCCAAGATTGATGTTGATGGATTTACTTTTGACTTTTTCTTCCGTCCTCTAGACTCTCTCTTCCTTTCTTTCTTTTTTGCGCTCTGTATTTCTTTTCAAAAATCTCTTGGTCCGACGGGGAAATTCCCGACTTTTGTTTGACTCATGAATACGGCAGGCACCTCTTTCGTAATCAATCTCTTGATCAATGGTGATAGGCACCTCTTCGTAATCAATTTGTGCAGAATCTGAAAGAGGAAAGGAAAGCAGGAGCTTGGGCTGGTTTCGCTCGTGAGGGGGGAAGGGTTGAGGCCTGCCATAAAAAAGAGTAGTGCAGATTCCATGGTGGATTCAACAAGTTGTAACTTTAACAATCAAAATTAACAGTGAAGGTTGGGATCTAAGAGAAAAGTAATGGGTTTCAAGTGCTAAAAATTGCGATTTGGGAGAAGCGTTGAGATCTAAAGCAGCAACATTTAATTAGGTTTTATGTGTAAAGAGATGAAGAAAGGAGAACAAGAGAATGAAAGAAAAATTATGAAGGGTTTTGCTAGCTGAAGAAAGGGTGAGAGGGTAGCATTCCGAAATTTTGGGCGCGCCCTAAATTTCAATTTTTTTAATGTTCCGCCTTTTCTCTCGGGGTGAGATTTGATAGCCAAATTTTAGAAAGGCTATGTTCAAAAGCTATCAATGGCATTATTTGTTGTAGTGGTACGTCTCTCAATCACTTAGCTTTCTTTCCCTTCTTTTAGAACACTTAGCTTTCTTTCCCTTCTTTTAGAACACTTAGCTTTCTTTCCCTTCTTTTAGAATCGAGGTGTTGTTTATGCTTTGTTTGTTGAGGAGAATATGTTTGGGAAGAAGTGGGAATCTCAAGTTATTACAAAGCAGTGAATGGAGTTGAAAGAGCTAGAGATATGAAATTGGCTATATCTATTGATAATAACTGTTGAATTCTATCTGTTTCCTTTCTTAATTTCAGTCTTGCGTGTATCTGTCTGGATCAATAGAATAAGAAATGCTAATTACTTGTCCTTTGACTCTTCGGTATTATCTTCTACCTTCTTGTTTCTTTCATCGTAATTTCTATTGTAATATGACATCGAAACTTGGGGATGTATTTGAAGTGAATGGATATCTTAATTTTTGAATATGTTGCACAGAGTGGAGCCTTATGTTACTTATAGGTACGTTTCTCTTGCATCTTCCTTCTTTTTCATCTTTTGATTTTTTAATAATCAATATTAACTTTTCTTGCTTGTTCTTTTAACTAATACTTTCAACTATCCTAACTTGAAAGTTTGGAGTTATTTGGGCTGCAGATCTCATCCATGAGATTATGATAGCACTATAACAAAGAAAACATTGATTTTTTTAGCAAAGTAAGTCCTGGCAAAACTCATTGAACTCTTGTTATTTTCCATCATTTTTCTTGTTGAAGTTGACACTGGAATTGTTACTATCTGTCTGCATTTGGAAAAAAAACTCTGTAATACATAAATTTTGGTTGTAAAGTAGATCTTGTTTCTTGGTAACTATGTCTGTCTCCACTTGTTGAGCAAACACGTTTAGATGCTTTATAAATTACACCTTTTTCCAAGATCTCTCAAACCCTCTGAAAATCGATTTGGTGGTGCAGAGTGCATAGACCCAAAGTCAATGTTGAATTGTGGATGTGGGACCATGAGAGAACACGCCTTTCTTGTAATTTTTATTACGTGTCAATGCTTATCAAAATGTTCATCATATAAACAGTACTACTACCTCATGTTGTTATGGATTCATTCTTTAATTTTCAAATCTTTCTTTTGTCATTATGGTTCATATTTTCTTGTTATTATCATTCTCTTTTTTGTTGATTAGGTACTTATGGAGAAGGCAGAGAGAAGTAATATTCCCAACATTGACAAGAAAAAGTAAGAAGAGTTTCTTTTAGTAGTCTTACATCAGTTTCTTAGTTCTTCTCATTTTCTTACTGGGTAATTGTAACAAGATTTGGTTGTATCTTGGCCTACTTTGATTCCCTGATGTTCAAGAAGATTAGGGTTTCAGTTTCTTGACCTGATTACGAATATTTTGCAGGTACCTAGTGCCTGTTGACCTGACTGTTGGTCAATTTGTTTATATTATTCGGAAAAGAATAAAATTGAGTGCAGAAAAGGCAATTTTTATATTTGTGGACAATGTGCTATCACCAACATGTTAA

mRNA sequence

ATGAACAATCGTACAATCGCCAAGATTGATGTTGATGGATTTACTTTTGACTTTTTCTTCCAGGAAAGGAAAGCAGGAGCTTGGGCTGGTTTCGCTCGTGAGGGGGGAAGGGTACTTATGGAGAAGGCAGAGAGAAGTAATATTCCCAACATTGACAAGAAAAAGTACCTAGTGCCTGTTGACCTGACTGTTGGTCAATTTGTTTATATTATTCGGAAAAGAATAAAATTGAGTGCAGAAAAGGCAATTTTTATATTTGTGGACAATGTGCTATCACCAACATGTTAA

Coding sequence (CDS)

ATGAACAATCGTACAATCGCCAAGATTGATGTTGATGGATTTACTTTTGACTTTTTCTTCCAGGAAAGGAAAGCAGGAGCTTGGGCTGGTTTCGCTCGTGAGGGGGGAAGGGTACTTATGGAGAAGGCAGAGAGAAGTAATATTCCCAACATTGACAAGAAAAAGTACCTAGTGCCTGTTGACCTGACTGTTGGTCAATTTGTTTATATTATTCGGAAAAGAATAAAATTGAGTGCAGAAAAGGCAATTTTTATATTTGTGGACAATGTGCTATCACCAACATGTTAA

Protein sequence

MNNRTIAKIDVDGFTFDFFFQERKAGAWAGFAREGGRVLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPTC

Homology

[Close]

BLAST of IVF0025523 vs. ExPASy Swiss-Prot
Match: Q8S926 (Autophagy-related protein 8e OS=Arabidopsis thaliana OX=3702 GN=ATG8E PE=1 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 1.9e-22
Identity = 61/96 (63.54%), Postives = 71/96 (73.96%), Query Frame = 0


Query: 1  MNNRTIAKIDVDGFTFDFFFQERKAGAWAGFAREGGR--VLMEKAERSNIPNIDKKKYLV 60
          MN  +I K+D D       F++RKA A     +   R  V++EKAE+S +PNIDKKKYLV
Sbjct: 1  MNKGSIFKMDND-------FEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLV 60

Query: 61 PVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT 95
          P DLTVGQFVY+IRKRIKLSAEKAIFIFVDNVL PT
Sbjct: 61 PSDLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPT 89

[Close]

BLAST of IVF0025523 vs. ExPASy Swiss-Prot
Match: Q9LZZ9 (Autophagy-related protein 8g OS=Arabidopsis thaliana OX=3702 GN=ATG8G PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.1e-21
Identity = 56/83 (67.47%), Postives = 66/83 (79.52%), Query Frame = 0


Query: 14 FTFDFFFQERKAGAWAGFAREGGR--VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYII 73
          F  D  F++RKA A     +   R  V++EK+E+S+IPNIDKKKYLVP DLTVGQFVY+I
Sbjct: 6  FRQDHDFEKRKAEALRIREKYSDRVPVIVEKSEKSDIPNIDKKKYLVPADLTVGQFVYVI 65

Query: 74 RKRIKLSAEKAIFIFVDNVLSPT 95
          RKRI+LSAEKAIFIFVDNVL PT
Sbjct: 66 RKRIQLSAEKAIFIFVDNVLPPT 88

[Close]

BLAST of IVF0025523 vs. ExPASy Swiss-Prot
Match: M1C146 (Autophagy-related protein 8C-like OS=Solanum tuberosum OX=4113 GN=ATG8CL PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 3.1e-20
Identity = 47/57 (82.46%), Postives = 54/57 (94.74%), Query Frame = 0


Query: 38 VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT 95
          V++EKAERS+IP+IDKKKYLVP DLTVGQFVY++RKRIKLSAEKAIFIFV N+L PT
Sbjct: 32 VIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPT 88

[Close]

BLAST of IVF0025523 vs. ExPASy Swiss-Prot
Match: Q8VYK7 (Autophagy-related protein 8f OS=Arabidopsis thaliana OX=3702 GN=ATG8F PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 3.1e-20
Identity = 48/56 (85.71%), Postives = 53/56 (94.64%), Query Frame = 0


Query: 38 VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSP 94
          V++EKAE+S+IP IDKKKYLVP DLTVGQFVY+IRKRIKLSAEKAIFIFVDNVL P
Sbjct: 32 VIVEKAEKSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPP 87

[Close]

BLAST of IVF0025523 vs. ExPASy Swiss-Prot
Match: Q8S927 (Autophagy-related protein 8c OS=Arabidopsis thaliana OX=3702 GN=ATG8C PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 6.9e-20
Identity = 45/57 (78.95%), Postives = 53/57 (92.98%), Query Frame = 0


Query: 38 VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT 95
          V++E+AERS++PNIDKKKYLVP DLTVGQFVY++RKRIKLSAEKAIF+FV N L PT
Sbjct: 32 VIVERAERSDVPNIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPT 88

[Close]

BLAST of IVF0025523 vs. ExPASy TrEMBL
Match: A0A6A1WJ01 (Autophagy-related protein OS=Morella rubra OX=262757 GN=CJ030_MR1G028182 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.1e-20
Identity = 56/77 (72.73%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 18  FFFQERKAGAWAGFAREGGRVLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKL 77
           FF    +     GF+  G  V++EKAERS+IPNIDKKKYLVP DLTVGQFVY+IRKRIKL
Sbjct: 146 FFTYNSEFKMLPGFSLSGCMVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKL 205

Query: 78  SAEKAIFIFVDNVLSPT 95
           SAEKAIFIFVDNVL PT
Sbjct: 206 SAEKAIFIFVDNVLPPT 222

[Close]

BLAST of IVF0025523 vs. ExPASy TrEMBL
Match: A0A178VZA0 (Autophagy-related protein OS=Arabidopsis thaliana OX=3702 GN=AXX17_At2g42740 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 7.2e-20
Identity = 61/96 (63.54%), Postives = 71/96 (73.96%), Query Frame = 0


Query: 1  MNNRTIAKIDVDGFTFDFFFQERKAGAWAGFAREGGR--VLMEKAERSNIPNIDKKKYLV 60
          MN  +I K+D D       F++RKA A     +   R  V++EKAE+S +PNIDKKKYLV
Sbjct: 1  MNKGSIFKMDND-------FEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLV 60

Query: 61 PVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT 95
          P DLTVGQFVY+IRKRIKLSAEKAIFIFVDNVL PT
Sbjct: 61 PSDLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPT 89

[Close]

BLAST of IVF0025523 vs. ExPASy TrEMBL
Match: A0A7J6H4K6 (Autophagy-related protein OS=Cannabis sativa OX=3483 GN=G4B88_006559 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.6e-19
Identity = 51/58 (87.93%), Postives = 56/58 (96.55%), Query Frame = 0


Query: 37  RVLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT 95
           +V++EKAERS+IPNIDKKKYLVP DLTVGQFVY+IRKRIKLSAEKAIFIFVDNVL PT
Sbjct: 67  KVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPT 124

[Close]

BLAST of IVF0025523 vs. ExPASy TrEMBL
Match: A0A7N2LEJ3 (Autophagy-related protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.6e-19
Identity = 51/58 (87.93%), Postives = 56/58 (96.55%), Query Frame = 0


Query: 37  RVLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT 95
           +V++EKAERS+IPNIDKKKYLVP DLTVGQFVY+IRKRIKLSAEKAIFIFVDNVL PT
Sbjct: 47  KVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPT 104

[Close]

BLAST of IVF0025523 vs. ExPASy TrEMBL
Match: A0A067K193 (Autophagy-related protein OS=Jatropha curcas OX=180498 GN=JCGZ_14564 PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.1e-19
Identity = 57/83 (68.67%), Postives = 66/83 (79.52%), Query Frame = 0


Query: 14 FTFDFFFQERKAGAWAGFAREGGR--VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYII 73
          F  +  F++R+A A     +   R  V++EKAERS+IPNIDKKKYLVP DLTVGQFVY+I
Sbjct: 6  FKLEHDFEKRRAEAMRIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVI 65

Query: 74 RKRIKLSAEKAIFIFVDNVLSPT 95
          RKRIKLSAEKAIFIFVDNVL PT
Sbjct: 66 RKRIKLSAEKAIFIFVDNVLPPT 88

[Close]

BLAST of IVF0025523 vs. NCBI nr
Match: BAB88391.1 (autophagy 8e [Arabidopsis thaliana])

HSP 1 Score: 105 bits (261), Expect = 9.89e-27
Identity = 61/96 (63.54%), Postives = 71/96 (73.96%), Query Frame = 0


Query: 1  MNNRTIAKIDVDGFTFDFFFQERKAGAWAGFAREGGR--VLMEKAERSNIPNIDKKKYLV 60
          MN  +I K+D D       F++RKA A     +   R  V++EKAE+S +PNIDKKKYLV
Sbjct: 1  MNKGSIFKMDDD-------FEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLV 60

Query: 61 PVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT 94
          P DLTVGQFVY+IRKRIKLSAEKAIFIFVDNVL PT
Sbjct: 61 PSDLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPT 89

[Close]

BLAST of IVF0025523 vs. NCBI nr
Match: NP_182042.2 (AUTOPHAGY 8E [Arabidopsis thaliana] >NP_850431.2 AUTOPHAGY 8E [Arabidopsis thaliana] >Q8S926.2 RecName: Full=Autophagy-related protein 8e; AltName: Full=Autophagy-related ubiquitin-like modifier ATG8e; Short=AtAPG8e; Short=Protein autophagy 8e; Flags: Precursor [Arabidopsis thaliana] >KAG7644361.1 Ubiquitin-like domain superfamily [Arabidopsis suecica] >AAL06559.1 At2g45170/T14P1.2 [Arabidopsis thaliana] >AAL67084.1 putative microtubule-associated protein [Arabidopsis thaliana] >AEC10520.1 AUTOPHAGY 8E [Arabidopsis thaliana] >AEC10521.1 AUTOPHAGY 8E [Arabidopsis thaliana])

HSP 1 Score: 105 bits (261), Expect = 9.89e-27
Identity = 61/96 (63.54%), Postives = 71/96 (73.96%), Query Frame = 0


Query: 1  MNNRTIAKIDVDGFTFDFFFQERKAGAWAGFAREGGR--VLMEKAERSNIPNIDKKKYLV 60
          MN  +I K+D D       F++RKA A     +   R  V++EKAE+S +PNIDKKKYLV
Sbjct: 1  MNKGSIFKMDND-------FEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLV 60

Query: 61 PVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT 94
          P DLTVGQFVY+IRKRIKLSAEKAIFIFVDNVL PT
Sbjct: 61 PSDLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPT 89

[Close]

BLAST of IVF0025523 vs. NCBI nr
Match: KAB1225275.1 (Autophagy-related protein 8g [Morella rubra])

HSP 1 Score: 108 bits (270), Expect = 1.17e-26
Identity = 56/77 (72.73%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 18  FFFQERKAGAWAGFAREGGRVLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKL 77
           FF    +     GF+  G  V++EKAERS+IPNIDKKKYLVP DLTVGQFVY+IRKRIKL
Sbjct: 146 FFTYNSEFKMLPGFSLSGCMVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKL 205

Query: 78  SAEKAIFIFVDNVLSPT 94
           SAEKAIFIFVDNVL PT
Sbjct: 206 SAEKAIFIFVDNVLPPT 222

[Close]

BLAST of IVF0025523 vs. NCBI nr
Match: AGU71346.1 (gaba receptor-associated protein, partial [Lumnitzera racemosa])

HSP 1 Score: 103 bits (256), Expect = 1.82e-26
Identity = 51/57 (89.47%), Postives = 55/57 (96.49%), Query Frame = 0


Query: 38 VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT 94
          V++EKAERS+IPNIDKKKYLVP DLTVGQFVY+IRKRIKLSAEKAIFIFVDNVL PT
Sbjct: 19 VIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPT 75

[Close]

BLAST of IVF0025523 vs. NCBI nr
Match: XP_028120985.1 (autophagy-related protein 8f-like [Camellia sinensis])

HSP 1 Score: 103 bits (257), Expect = 1.91e-26
Identity = 56/77 (72.73%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 20 FQERKAGAWAGFAREGGR--VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKL 79
          F++R+A A     +   R  V++EKAERS+IPNIDKKKYLVP DLTVGQFVY+IRKRIKL
Sbjct: 12 FEKRRAEAARIREKYSDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVYVIRKRIKL 71

Query: 80 SAEKAIFIFVDNVLSPT 94
          SAEKAIFIFVDNVL PT
Sbjct: 72 SAEKAIFIFVDNVLPPT 88

[Close]

BLAST of IVF0025523 vs. TAIR 10
Match: AT2G45170.1 (AUTOPHAGY 8E )

HSP 1 Score: 106.3 bits (264), Expect = 1.4e-23
Identity = 61/96 (63.54%), Postives = 71/96 (73.96%), Query Frame = 0


Query: 1  MNNRTIAKIDVDGFTFDFFFQERKAGAWAGFAREGGR--VLMEKAERSNIPNIDKKKYLV 60
          MN  +I K+D D       F++RKA A     +   R  V++EKAE+S +PNIDKKKYLV
Sbjct: 1  MNKGSIFKMDND-------FEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLV 60

Query: 61 PVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT 95
          P DLTVGQFVY+IRKRIKLSAEKAIFIFVDNVL PT
Sbjct: 61 PSDLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPT 89

[Close]

BLAST of IVF0025523 vs. TAIR 10
Match: AT2G45170.2 (AUTOPHAGY 8E )

HSP 1 Score: 106.3 bits (264), Expect = 1.4e-23
Identity = 61/96 (63.54%), Postives = 71/96 (73.96%), Query Frame = 0


Query: 1  MNNRTIAKIDVDGFTFDFFFQERKAGAWAGFAREGGR--VLMEKAERSNIPNIDKKKYLV 60
          MN  +I K+D D       F++RKA A     +   R  V++EKAE+S +PNIDKKKYLV
Sbjct: 1  MNKGSIFKMDND-------FEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLV 60

Query: 61 PVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSPT 95
          P DLTVGQFVY+IRKRIKLSAEKAIFIFVDNVL PT
Sbjct: 61 PSDLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPT 89

[Close]

BLAST of IVF0025523 vs. TAIR 10
Match: AT3G60640.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 102.8 bits (255), Expect = 1.5e-22
Identity = 56/83 (67.47%), Postives = 66/83 (79.52%), Query Frame = 0


Query: 14 FTFDFFFQERKAGAWAGFAREGGR--VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYII 73
          F  D  F++RKA A     +   R  V++EK+E+S+IPNIDKKKYLVP DLTVGQFVY+I
Sbjct: 6  FRQDHDFEKRKAEALRIREKYSDRVPVIVEKSEKSDIPNIDKKKYLVPADLTVGQFVYVI 65

Query: 74 RKRIKLSAEKAIFIFVDNVLSPT 95
          RKRI+LSAEKAIFIFVDNVL PT
Sbjct: 66 RKRIQLSAEKAIFIFVDNVLPPT 88

[Close]

BLAST of IVF0025523 vs. TAIR 10
Match: AT4G16520.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 99.0 bits (245), Expect = 2.2e-21
Identity = 48/56 (85.71%), Postives = 53/56 (94.64%), Query Frame = 0


Query: 38 VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSP 94
          V++EKAE+S+IP IDKKKYLVP DLTVGQFVY+IRKRIKLSAEKAIFIFVDNVL P
Sbjct: 32 VIVEKAEKSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPP 87

[Close]

BLAST of IVF0025523 vs. TAIR 10
Match: AT4G16520.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 99.0 bits (245), Expect = 2.2e-21
Identity = 48/56 (85.71%), Postives = 53/56 (94.64%), Query Frame = 0


Query: 38 VLMEKAERSNIPNIDKKKYLVPVDLTVGQFVYIIRKRIKLSAEKAIFIFVDNVLSP 94
          V++EKAE+S+IP IDKKKYLVP DLTVGQFVY+IRKRIKLSAEKAIFIFVDNVL P
Sbjct: 32 VIVEKAEKSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPP 87

The following BLAST results are available for this feature:

BLAST of IVF0025523 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S926	1.9e-22	63.54	Autophagy-related protein 8e OS=Arabidopsis thaliana OX=3702 GN=ATG8E PE=1 SV=2	[more]
Q9LZZ9	2.1e-21	67.47	Autophagy-related protein 8g OS=Arabidopsis thaliana OX=3702 GN=ATG8G PE=2 SV=1	[more]
M1C146	3.1e-20	82.46	Autophagy-related protein 8C-like OS=Solanum tuberosum OX=4113 GN=ATG8CL PE=1 SV...	[more]
Q8VYK7	3.1e-20	85.71	Autophagy-related protein 8f OS=Arabidopsis thaliana OX=3702 GN=ATG8F PE=1 SV=1	[more]
Q8S927	6.9e-20	78.95	Autophagy-related protein 8c OS=Arabidopsis thaliana OX=3702 GN=ATG8C PE=1 SV=1	[more]

BLAST of IVF0025523 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A1WJ01	1.1e-20	72.73	Autophagy-related protein OS=Morella rubra OX=262757 GN=CJ030_MR1G028182 PE=3 SV...	[more]
A0A178VZA0	7.2e-20	63.54	Autophagy-related protein OS=Arabidopsis thaliana OX=3702 GN=AXX17_At2g42740 PE=...	[more]
A0A7J6H4K6	1.6e-19	87.93	Autophagy-related protein OS=Cannabis sativa OX=3483 GN=G4B88_006559 PE=3 SV=1	[more]
A0A7N2LEJ3	1.6e-19	87.93	Autophagy-related protein OS=Quercus lobata OX=97700 PE=3 SV=1	[more]
A0A067K193	2.1e-19	68.67	Autophagy-related protein OS=Jatropha curcas OX=180498 GN=JCGZ_14564 PE=3 SV=1	[more]

BLAST of IVF0025523 vs. NCBI nr


Match Name	E-value	Identity	Description
BAB88391.1	9.89e-27	63.54	autophagy 8e [Arabidopsis thaliana]	[more]
NP_182042.2	9.89e-27	63.54	AUTOPHAGY 8E [Arabidopsis thaliana] >NP_850431.2 AUTOPHAGY 8E [Arabidopsis thali...	[more]
KAB1225275.1	1.17e-26	72.73	Autophagy-related protein 8g [Morella rubra]	[more]
AGU71346.1	1.82e-26	89.47	gaba receptor-associated protein, partial [Lumnitzera racemosa]	[more]
XP_028120985.1	1.91e-26	72.73	autophagy-related protein 8f-like [Camellia sinensis]	[more]

BLAST of IVF0025523 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45170.1	1.4e-23	63.54	AUTOPHAGY 8E	[more]
AT2G45170.2	1.4e-23	63.54	AUTOPHAGY 8E	[more]
AT3G60640.1	1.5e-22	67.47	Ubiquitin-like superfamily protein	[more]
AT4G16520.1	2.2e-21	85.71	Ubiquitin-like superfamily protein	[more]
AT4G16520.2	2.2e-21	85.71	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 10..95 e-value: 1.9E-22 score: 81.4
None	No IPR available	PANTHER	PTHR10969:SF77	AUTOPHAGY-RELATED PROTEIN	coord: 38..94
IPR004241	Autophagy protein Atg8 ubiquitin-like	PFAM	PF02991	Atg8	coord: 38..94 e-value: 4.1E-23 score: 81.5
IPR004241	Autophagy protein Atg8 ubiquitin-like	PANTHER	PTHR10969	MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED	coord: 38..94
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 37..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0025523.1	IVF0025523.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
biological_process	GO:0006995	cellular response to nitrogen starvation
biological_process	GO:0045471	response to ethanol
cellular_component	GO:0005776	autophagosome
cellular_component	GO:0005874	microtubule
cellular_component	GO:0005774	vacuolar membrane
molecular_function	GO:0005515	protein binding