IVF0025431 (gene) Melon (IVF77) v1

Overview
NameIVF0025431
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPolyprotein
Locationchr08: 10900524 .. 10900902 (-)
RNA-Seq ExpressionIVF0025431
SyntenyIVF0025431
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATATTTTGTTGGAGCTACAACACAACATCATATCCTCAATACAAGATGTTAGTCAAGAATCTTAAAATCAAATGGTAGGAAAAATACGATTTTCAGCATGCCACCATCAAACACATAAAAGAATGGTTCGTAGAGAACGGATATCTACAAGACATTGATCAAGGAAAAAATGTCAAGTTCTTAAATGAAAAATCAAAGCTTCTTGCAACACTCGCTCAGGCCACAACTGATGCAGATTTTCAAAGATTATTACCAACAACAGTAAATGCCTCTACATCTTCAAAATCAACATCTTCTTTCATACAGGAAGACGAAGAACAAGTAGATCCAGTATATGATCTAGACAATCCATTTCTCGACTCACAGCCTATGTGA

mRNA sequence

ATGGATATTTTGTTGGAGCTACAACACAACATCATATCCTCAATACAAGATCATGCCACCATCAAACACATAAAAGAATGGTTCGTAGAGAACGGATATCTACAAGACATTGATCAAGGAAAAAATGTCAAGTTCTTAAATGAAAAATCAAAGCTTCTTGCAACACTCGCTCAGGCCACAACTGATGCAGATTTTCAAAGATTATTACCAACAACAGTAAATGCCTCTACATCTTCAAAATCAACATCTTCTTTCATACAGGAAGACGAAGAACAAGTAGATCCAGTATATGATCTAGACAATCCATTTCTCGACTCACAGCCTATGTGA

Coding sequence (CDS)

ATGGATATTTTGTTGGAGCTACAACACAACATCATATCCTCAATACAAGATCATGCCACCATCAAACACATAAAAGAATGGTTCGTAGAGAACGGATATCTACAAGACATTGATCAAGGAAAAAATGTCAAGTTCTTAAATGAAAAATCAAAGCTTCTTGCAACACTCGCTCAGGCCACAACTGATGCAGATTTTCAAAGATTATTACCAACAACAGTAAATGCCTCTACATCTTCAAAATCAACATCTTCTTTCATACAGGAAGACGAAGAACAAGTAGATCCAGTATATGATCTAGACAATCCATTTCTCGACTCACAGCCTATGTGA

Protein sequence

MDILLELQHNIISSIQDHATIKHIKEWFVENGYLQDIDQGKNVKFLNEKSKLLATLAQATTDADFQRLLPTTVNASTSSKSTSSFIQEDEEQVDPVYDLDNPFLDSQPM
Homology
BLAST of IVF0025431 vs. ExPASy TrEMBL
Match: A0A5A7SNT5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G001890 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 7.6e-42
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 0

Query: 18  HATIKHIKEWFVENGYLQDIDQGKNVKFLNEKSKLLATLAQATTDADFQRLLPTTVNAST 77
           HATIKHIKEWFVENGYLQDIDQGKNVKFLNEKSKLLATLAQATTDADFQRLLPTTVNAST
Sbjct: 53  HATIKHIKEWFVENGYLQDIDQGKNVKFLNEKSKLLATLAQATTDADFQRLLPTTVNAST 112

Query: 78  SSKSTSSFIQEDEEQVDPVYDLDNPFLDSQPM 110
           SSKSTSSF+QEDEEQVDP YDLDNPFLDSQPM
Sbjct: 113 SSKSTSSFLQEDEEQVDPEYDLDNPFLDSQPM 144

BLAST of IVF0025431 vs. ExPASy TrEMBL
Match: A0A5A7SWC0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold213G00570 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.3e-30
Identity = 75/92 (81.52%), Postives = 80/92 (86.96%), Query Frame = 0

Query: 18  HATIKHIKEWFVENGYLQDIDQGKNVKFLNEKSKLLATLAQATTDADFQRLLPTTVNAST 77
           HATIKHIKEWF EN YLQDIDQ KNV+FLN+KSKLL  LAQATTDADFQRLL T VNAS+
Sbjct: 18  HATIKHIKEWFAENKYLQDIDQRKNVEFLNDKSKLLVALAQATTDADFQRLLSTAVNASS 77

Query: 78  SSKSTSSFIQEDEEQVDPVYDLDNPFLDSQPM 110
           SSKS SS IQEDEEQ+DP YDLD+  LDSQPM
Sbjct: 78  SSKSPSSSIQEDEEQIDPEYDLDD--LDSQPM 107

BLAST of IVF0025431 vs. ExPASy TrEMBL
Match: A0A5D3BI61 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00950 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.6e-21
Identity = 59/81 (72.84%), Postives = 64/81 (79.01%), Query Frame = 0

Query: 28  FVENGYLQDIDQGKNVKFLNEKSKLLATLAQATTDADFQRLLPTTVNASTSSKSTSSFIQ 87
           + +NG LQDIDQ KN KFLN+K K LA L QAT DADFQRLL T VN S+SSK   SFIQ
Sbjct: 139 YQKNGDLQDIDQRKNAKFLNDKLKFLAALVQATIDADFQRLLSTAVNTSSSSKPAPSFIQ 198

Query: 88  EDEEQVDPVYDLDNPFLDSQP 109
           EDEEQVD  YDLD+PFLDSQP
Sbjct: 199 EDEEQVDLEYDLDDPFLDSQP 219

BLAST of IVF0025431 vs. ExPASy TrEMBL
Match: A0A0A0KYU0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G427780 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 3.2e-16
Identity = 44/57 (77.19%), Postives = 51/57 (89.47%), Query Frame = 0

Query: 15 IQDHATIKHIKEWFVENGYLQDIDQGKNVKFLNEKSKLLATLAQATTDADFQRLLPT 72
          I++HATIKH+KEWF EN YLQDIDQ KN++FLN+KSKLLA LAQATTD +FQRLL T
Sbjct: 18 IKEHATIKHMKEWFAENNYLQDIDQRKNIEFLNDKSKLLALLAQATTDTNFQRLLST 74

BLAST of IVF0025431 vs. ExPASy TrEMBL
Match: A0A5A7UZX0 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold233G00530 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 8.0e-15
Identity = 41/48 (85.42%), Postives = 45/48 (93.75%), Query Frame = 0

Query: 18  HATIKHIKEWFVENGYLQDIDQGKNVKFLNEKSKLLATLAQATTDADF 66
           HATIKHIKEWF +NGYLQDIDQ KN++FLN+KSKLLA LAQATTDADF
Sbjct: 84  HATIKHIKEWFADNGYLQDIDQRKNIEFLNDKSKLLAALAQATTDADF 131

BLAST of IVF0025431 vs. NCBI nr
Match: KAA0025901.1 (hypothetical protein E6C27_scaffold34G001890 [Cucumis melo var. makuwa])

HSP 1 Score: 179 bits (454), Expect = 1.46e-55
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 0

Query: 18  HATIKHIKEWFVENGYLQDIDQGKNVKFLNEKSKLLATLAQATTDADFQRLLPTTVNAST 77
           HATIKHIKEWFVENGYLQDIDQGKNVKFLNEKSKLLATLAQATTDADFQRLLPTTVNAST
Sbjct: 53  HATIKHIKEWFVENGYLQDIDQGKNVKFLNEKSKLLATLAQATTDADFQRLLPTTVNAST 112

Query: 78  SSKSTSSFIQEDEEQVDPVYDLDNPFLDSQPM 109
           SSKSTSSF+QEDEEQVDP YDLDNPFLDSQPM
Sbjct: 113 SSKSTSSFLQEDEEQVDPEYDLDNPFLDSQPM 144

BLAST of IVF0025431 vs. NCBI nr
Match: KAA0034823.1 (hypothetical protein E6C27_scaffold213G00570 [Cucumis melo var. makuwa])

HSP 1 Score: 142 bits (357), Expect = 2.73e-41
Identity = 75/92 (81.52%), Postives = 80/92 (86.96%), Query Frame = 0

Query: 18  HATIKHIKEWFVENGYLQDIDQGKNVKFLNEKSKLLATLAQATTDADFQRLLPTTVNAST 77
           HATIKHIKEWF EN YLQDIDQ KNV+FLN+KSKLL  LAQATTDADFQRLL T VNAS+
Sbjct: 18  HATIKHIKEWFAENKYLQDIDQRKNVEFLNDKSKLLVALAQATTDADFQRLLSTAVNASS 77

Query: 78  SSKSTSSFIQEDEEQVDPVYDLDNPFLDSQPM 109
           SSKS SS IQEDEEQ+DP YDLD+  LDSQPM
Sbjct: 78  SSKSPSSSIQEDEEQIDPEYDLDD--LDSQPM 107

BLAST of IVF0025431 vs. NCBI nr
Match: TYJ98361.1 (hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa])

HSP 1 Score: 110 bits (276), Expect = 1.78e-27
Identity = 59/81 (72.84%), Postives = 64/81 (79.01%), Query Frame = 0

Query: 28  FVENGYLQDIDQGKNVKFLNEKSKLLATLAQATTDADFQRLLPTTVNASTSSKSTSSFIQ 87
           + +NG LQDIDQ KN KFLN+K K LA L QAT DADFQRLL T VN S+SSK   SFIQ
Sbjct: 139 YQKNGDLQDIDQRKNAKFLNDKLKFLAALVQATIDADFQRLLSTAVNTSSSSKPAPSFIQ 198

Query: 88  EDEEQVDPVYDLDNPFLDSQP 108
           EDEEQVD  YDLD+PFLDSQP
Sbjct: 199 EDEEQVDLEYDLDDPFLDSQP 219

BLAST of IVF0025431 vs. NCBI nr
Match: XP_031739746.1 (uncharacterized protein LOC116403279 [Cucumis sativus] >KAE8649669.1 hypothetical protein Csa_012459 [Cucumis sativus])

HSP 1 Score: 94.7 bits (234), Expect = 1.14e-22
Identity = 44/57 (77.19%), Postives = 51/57 (89.47%), Query Frame = 0

Query: 15 IQDHATIKHIKEWFVENGYLQDIDQGKNVKFLNEKSKLLATLAQATTDADFQRLLPT 71
          I++HATIKH+KEWF EN YLQDIDQ KN++FLN+KSKLLA LAQATTD +FQRLL T
Sbjct: 25 IKEHATIKHMKEWFAENNYLQDIDQRKNIEFLNDKSKLLALLAQATTDTNFQRLLST 81

BLAST of IVF0025431 vs. NCBI nr
Match: KAA0059031.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 90.1 bits (222), Expect = 1.76e-20
Identity = 41/48 (85.42%), Postives = 45/48 (93.75%), Query Frame = 0

Query: 18  HATIKHIKEWFVENGYLQDIDQGKNVKFLNEKSKLLATLAQATTDADF 65
           HATIKHIKEWF +NGYLQDIDQ KN++FLN+KSKLLA LAQATTDADF
Sbjct: 84  HATIKHIKEWFADNGYLQDIDQRKNIEFLNDKSKLLAALAQATTDADF 131

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SNT57.6e-4297.83Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7SWC01.3e-3081.52Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BI612.6e-2172.84Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KYU03.2e-1677.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G427780 PE=4 SV=1[more]
A0A5A7UZX08.0e-1585.42Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold233G00530 PE... [more]
Match NameE-valueIdentityDescription
KAA0025901.11.46e-5597.83hypothetical protein E6C27_scaffold34G001890 [Cucumis melo var. makuwa][more]
KAA0034823.12.73e-4181.52hypothetical protein E6C27_scaffold213G00570 [Cucumis melo var. makuwa][more]
TYJ98361.11.78e-2772.84hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa][more]
XP_031739746.11.14e-2277.19uncharacterized protein LOC116403279 [Cucumis sativus] >KAE8649669.1 hypothetica... [more]
KAA0059031.11.76e-2085.42polyprotein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..109

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0025431.1IVF0025431.1mRNA