IVF0025359 (gene) Melon (IVF77) v1

Overview


Name	IVF0025359
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	transcription factor RAX3-like
Location	chr03: 26530122 .. 26531585 (+)
RNA-Seq Expression	IVF0025359
Synteny	IVF0025359

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGAGCTCCATGTTGTGAGAAAGGCAAAGTGAAGAAAGGGCCTTGGTCTCCTGATGAGGATGCCATTCTCAAAAGTTATGTAGAAACTCATGGCATTGCTGGTACCTGGATTGCTCTGCCCACTAAAGCTGGTTTAATCTCTTGCTTTTCTCTTCACTTTTATAAGAACTAACACCAAGTTTTTAGTTTGGTTTTCTCTGTCGTTTCTTTGTTTCTGTAATGCAATGTTTTGAAAGAAATAAGAAACAAAAAAACTGCAGGGTTGAAGAGATGTGGGAAAAGTTGTAGGTTAAGATGGCTAAACTATCTCAGACCCAATATCAAGCATGGAGAATTTACAGAAGAGGAAGACAATGTCATTTTTAATCTCTATAATCAATATGGAAGCAGGCAAGTTCGGTCTTTTTTTTTCCAAGCCAGGATAAATCTTAAACAAGGATTCAGATTTGAAGCTTTACAAAGCTTACACAAAAAAGAAATTTGAATCTTGGATTATTTATTAGTTTCAATAAGATAGTCATGAGTATCTCTGTATGATTCTGCTTTCTTACCATTTGTTTTCGCCATGGTGTTTATCTTTCTATGGTAACATTACCAAAATTTAAGTTTTTAAAAGTTAAAAGGTCCCTTTTTTGTTGTTAGTTTTTGAAAATTAAGATTATAAATATTACTTTTGGTAAATTCCTTAGTTCTATTCCCCTGGGAATGTTTTTAAAAATCAAAACAAGTTTTAAAAACTAAAAGGGATAGGTTTTGTGGTTTTTGTTTTTGAAATTTGGGTAAGAGTTATGAATCTTTGTTCAGAAAAGTGAAACTTACAATAATAAAGAAGTTCGAGAGGGAAGAAACATACATTTTAAAAAAAGAGTAACCTAAGAAGAAAATTGTTATGAAATGAAACCTAAGACCCAATTTGGTATTTGTAATTTACGTCTGTTTTCTCCTAAACTTCCTACTATGTATGTTTTCACATCTCTGTGAATAAATATTTGAATTTAAACAATAAAAATAAAGAAATTTACAAGTATCAATGATGTTTATAAGCTTAGTTTTCAAATAAATGGAAAGATAATCTTGAGATTATAATCTGTTAATTGTTGTGTTGTTGGCCAGATGGTCTACCATAGCCTCTCAACTCCCTGGTAGAACAGACAATGATGTAAAAAACCATTGGAACACTAAACTGAAGAAGAAGAAGAAGCTGTTCCTTGCAGCCAAAACCAAGAGTCATCTTCACTCGCAATCCCCACTCCTACATGCTCCACAAACAGAGTTCACTGAAATCATTAACCACACACCAATCTCATGCATTGCTGCTTTACACAACTCAGTCGATCAGTTCCAGATTCCCACCATTTCCGAACCCGATCCGGGTAGTGACAGTAGAGATCAATGGGGTTCAACGGAACCATGGGGCTGTGATTTCCCAGCAGACATCATCTGCAGCATGTTGTTTTAA

mRNA sequence

ATGGGAAGAGCTCCATGTTGTGAGAAAGGCAAAGTGAAGAAAGGGCCTTGGTCTCCTGATGAGGATGCCATTCTCAAAAGTTATGTAGAAACTCATGGCATTGCTGGTACCTGGATTGCTCTGCCCACTAAAGCTGGGTTGAAGAGATGTGGGAAAAGTTGTAGGTTAAGATGGCTAAACTATCTCAGACCCAATATCAAGCATGGAGAATTTACAGAAGAGGAAGACAATGTCATTTTTAATCTCTATAATCAATATGGAAGCAGATGGTCTACCATAGCCTCTCAACTCCCTGGTAGAACAGACAATGATGTAAAAAACCATTGGAACACTAAACTGAAGAAGAAGAAGAAGCTGTTCCTTGCAGCCAAAACCAAGAGTCATCTTCACTCGCAATCCCCACTCCTACATGCTCCACAAACAGAGTTCACTGAAATCATTAACCACACACCAATCTCATGCATTGCTGCTTTACACAACTCAGTCGATCAGTTCCAGATTCCCACCATTTCCGAACCCGATCCGGGTAGTGACAGTAGAGATCAATGGGGTTCAACGGAACCATGGGGCTGTGATTTCCCAGCAGACATCATCTGCAGCATGTTGTTTTAA

Coding sequence (CDS)

ATGGGAAGAGCTCCATGTTGTGAGAAAGGCAAAGTGAAGAAAGGGCCTTGGTCTCCTGATGAGGATGCCATTCTCAAAAGTTATGTAGAAACTCATGGCATTGCTGGTACCTGGATTGCTCTGCCCACTAAAGCTGGGTTGAAGAGATGTGGGAAAAGTTGTAGGTTAAGATGGCTAAACTATCTCAGACCCAATATCAAGCATGGAGAATTTACAGAAGAGGAAGACAATGTCATTTTTAATCTCTATAATCAATATGGAAGCAGATGGTCTACCATAGCCTCTCAACTCCCTGGTAGAACAGACAATGATGTAAAAAACCATTGGAACACTAAACTGAAGAAGAAGAAGAAGCTGTTCCTTGCAGCCAAAACCAAGAGTCATCTTCACTCGCAATCCCCACTCCTACATGCTCCACAAACAGAGTTCACTGAAATCATTAACCACACACCAATCTCATGCATTGCTGCTTTACACAACTCAGTCGATCAGTTCCAGATTCCCACCATTTCCGAACCCGATCCGGGTAGTGACAGTAGAGATCAATGGGGTTCAACGGAACCATGGGGCTGTGATTTCCCAGCAGACATCATCTGCAGCATGTTGTTTTAA

Protein sequence

MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLNYLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKLFLAAKTKSHLHSQSPLLHAPQTEFTEIINHTPISCIAALHNSVDQFQIPTISEPDPGSDSRDQWGSTEPWGCDFPADIICSMLF

Homology

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BLAST of IVF0025359 vs. ExPASy Swiss-Prot
Match: Q9SJL7 (Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.5e-51
Identity = 89/129 (68.99%), Postives = 104/129 (80.62%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCC+K  VK+GPWSP+EDA LK Y+E  G  G WIALP KAGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKLF 120
           YLRPNI+HG+FTEEEDN+I++L+   GSRWS IA+ L GRTDND+KN+WNTKLKKK    
Sbjct: 61  YLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLKKKLIAT 120

Query: 121 LAAKTKSHL 130
           +A     HL
Sbjct: 121 MAPPPHHHL 129

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BLAST of IVF0025359 vs. ExPASy Swiss-Prot
Match: Q9M2Y9 (Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.5e-51
Identity = 89/116 (76.72%), Postives = 100/116 (86.21%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCC+K  VKKGPWSP+EDA LKSY+E  G  G WIALP K GLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKK 117
           YLRPNIKHG F+EEE+N+I +LY   GSRWS IA+QLPGRTDND+KN+WNT+LKKK
Sbjct: 61  YLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKK 116

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BLAST of IVF0025359 vs. ExPASy Swiss-Prot
Match: Q9FKL2 (Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 5.5e-51
Identity = 87/116 (75.00%), Postives = 98/116 (84.48%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCC+K  VKKGPWSP+ED  LK Y++ +G  G WIALP K GLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKK 117
           YLRPNIKHG F+EEED +I +LY   GSRWS IA+QLPGRTDND+KN+WNTKLKKK
Sbjct: 61  YLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKK 116

[Close]

BLAST of IVF0025359 vs. ExPASy Swiss-Prot
Match: Q9FG68 (Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 4.7e-50
Identity = 88/137 (64.23%), Postives = 109/137 (79.56%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCC+K KVK+GPWSP+ED+ L+ Y+E +G  G WI+ P KAGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKLF 120
           YLRPNIKHG+F+EEED +IF+L+   GSRWS IA+ LPGRTDND+KN+WNTKL  +KKL 
Sbjct: 61  YLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKL--RKKLL 120

Query: 121 LAAKTKSHLHSQSPLLH 138
            ++   S     SP L+
Sbjct: 121 SSSSDSSSSAMASPYLN 135

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BLAST of IVF0025359 vs. ExPASy Swiss-Prot
Match: F4JSU0 (Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 6.1e-50
Identity = 89/132 (67.42%), Postives = 104/132 (78.79%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCC+K  VKKGPWS +EDA+LKSY+E HG    WI+LP + G+KRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRIGIKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKLF 120
           YLRPN+KHG FT+EED +I +LY   GSRWS IASQLPGRTDND+KN+WNT+LKKK    
Sbjct: 61  YLRPNLKHGGFTDEEDYIICSLYITIGSRWSIIASQLPGRTDNDIKNYWNTRLKKK---- 120

Query: 121 LAAKTKSHLHSQ 133
           L +K     H Q
Sbjct: 121 LLSKQGKAFHQQ 128

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BLAST of IVF0025359 vs. ExPASy TrEMBL
Match: A0A1S3BB79 (transcription factor RAX3-like OS=Cucumis melo OX=3656 GN=LOC103487802 PE=4 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 1.1e-118
Identity = 201/203 (99.01%), Postives = 202/203 (99.51%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKLF 120
           YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKLF
Sbjct: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKLF 120

Query: 121 LAAKTKSHLHSQSPLLHAPQTEFTEIINHTPISCIAALHNSVDQFQIPTISEPDPGSDSR 180
           LAAKTKSHLHSQSPLLHAPQTEFTEIINHTPISCIAALHNSVDQFQIPT+SEPDPGSDSR
Sbjct: 121 LAAKTKSHLHSQSPLLHAPQTEFTEIINHTPISCIAALHNSVDQFQIPTVSEPDPGSDSR 180

Query: 181 DQWGSTEPWGCDFPADIICSMLF 204
           D WGSTEPWGCDFPADIICSMLF
Sbjct: 181 DHWGSTEPWGCDFPADIICSMLF 203

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BLAST of IVF0025359 vs. ExPASy TrEMBL
Match: A0A0A0LR01 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G352410 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 2.5e-110
Identity = 190/204 (93.14%), Postives = 196/204 (96.08%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKL-KKKKKL 120
           YLRPNIKHGEFTEEEDNVIFNL+NQYGSRWSTIASQLPGRTDNDVKNHWNTKL KKKKKL
Sbjct: 61  YLRPNIKHGEFTEEEDNVIFNLFNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKKL 120

Query: 121 FLAAKTKSHLHSQSPLLHAPQTEFTEIINHTPISCIAALHNSVDQFQIPTISEPDPGSDS 180
           FLAAKT+SHLHSQSPLLH  +T+FTEIINHTPISCIAAL NSVDQFQIPT+SEP  GSDS
Sbjct: 121 FLAAKTQSHLHSQSPLLHTQETDFTEIINHTPISCIAALDNSVDQFQIPTVSEPGAGSDS 180

Query: 181 RDQWGSTEPWGCDFPADIICSMLF 204
           RDQW S EPWGCDFPAD+ICSMLF
Sbjct: 181 RDQWSSMEPWGCDFPADMICSMLF 204

[Close]

BLAST of IVF0025359 vs. ExPASy TrEMBL
Match: A0A5A7UYK8 (Clathrin interactor EPSIN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001170 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.1e-107
Identity = 191/204 (93.63%), Postives = 191/204 (93.63%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGI          AGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGI----------AGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGS---RWSTIASQLPGRTDNDVKNHWNTKLKKKK 120
           YLRPNIKHGEFTEEEDNVIFNLYNQYGS   RWSTIASQLPGRTDNDVKNHWNTKLKKKK
Sbjct: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRQVRWSTIASQLPGRTDNDVKNHWNTKLKKKK 120

Query: 121 KLFLAAKTKSHLHSQSPLLHAPQTEFTEIINHTPISCIAALHNSVDQFQIPTISEPDPGS 180
           KLFLAAKTKSHLHSQSPLLHAPQTEFTEIINHTPISCIAALHNSVDQFQIPTISEPDPGS
Sbjct: 121 KLFLAAKTKSHLHSQSPLLHAPQTEFTEIINHTPISCIAALHNSVDQFQIPTISEPDPGS 180

Query: 181 DSRDQWGSTEPWGCDFPADIICSM 202
           DSRDQWGSTEPWGCDFPADIICSM
Sbjct: 181 DSRDQWGSTEPWGCDFPADIICSM 194

[Close]

BLAST of IVF0025359 vs. ExPASy TrEMBL
Match: A0A6J1GH52 (transcription factor MYB36-like OS=Cucurbita moschata OX=3662 GN=LOC111454127 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.8e-74
Identity = 142/211 (67.30%), Postives = 158/211 (74.88%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCC+K  VKKGPWSPDEDA LK YVETHG AGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKLF 120
           YLRPNIKHG+FTE+EDN+IFNLYNQYGSRWS+IASQLPGRTDNDVKNHWNTKLKKKKKL 
Sbjct: 61  YLRPNIKHGDFTEDEDNLIFNLYNQYGSRWSSIASQLPGRTDNDVKNHWNTKLKKKKKLL 120

Query: 121 LAA-KTKSHLHSQSPLLHAPQTEFTEIINHTPISCIAALHNSVDQFQIPTISE------- 180
           +AA KTK    S +      +T   + I++      +A  +SV QFQ P +S        
Sbjct: 121 VAAGKTKLQTMSST------ETSLPQTISN------SAGFDSVAQFQTPNVSPSSFSDMV 180

Query: 181 PDPGSDSRDQWGSTEPWGCDFPADIICSMLF 204
           P      RD+WG  E WGCDF  D+ICSM F
Sbjct: 181 PGGSGYGRDEWGLMEDWGCDFSPDMICSMFF 199

[Close]

BLAST of IVF0025359 vs. ExPASy TrEMBL
Match: A0A6J1KQU4 (transcription factor MYB36-like OS=Cucurbita maxima OX=3661 GN=LOC111496394 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.6e-72
Identity = 141/212 (66.51%), Postives = 160/212 (75.47%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCC+K  VKKGPWSPDEDA LK YVETHG AGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKLF 120
           YLRPNIKHG+FTE+EDN+IFNLYNQ+GSRWS+IASQLPGRTDNDVKNHWNTKLKKKKKL 
Sbjct: 61  YLRPNIKHGDFTEDEDNLIFNLYNQHGSRWSSIASQLPGRTDNDVKNHWNTKLKKKKKLL 120

Query: 121 LAA-KTKSHLHSQSPLLHAPQTEFTEIINHTPISCIAALHNSVDQFQIPTISEPDPGSD- 180
           +AA KTK    S +      +T   + I++      +A  +SV QFQIP +S P   SD 
Sbjct: 121 VAAGKTKLQTMSST------ETSLPQTISN------SAGFDSVAQFQIPNVS-PSSFSDM 180

Query: 181 -------SRDQWGSTEPWGCDFPADIICSMLF 204
                   RD+WG  E WGC F  D++C+M F
Sbjct: 181 VPGGRGYGRDEWGLMEDWGCYFSPDMVCTMFF 199

[Close]

BLAST of IVF0025359 vs. NCBI nr
Match: XP_008444504.1 (PREDICTED: transcription factor RAX3-like [Cucumis melo])

HSP 1 Score: 434 bits (1117), Expect = 4.35e-154
Identity = 201/203 (99.01%), Postives = 202/203 (99.51%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKLF 120
           YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKLF
Sbjct: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKLF 120

Query: 121 LAAKTKSHLHSQSPLLHAPQTEFTEIINHTPISCIAALHNSVDQFQIPTISEPDPGSDSR 180
           LAAKTKSHLHSQSPLLHAPQTEFTEIINHTPISCIAALHNSVDQFQIPT+SEPDPGSDSR
Sbjct: 121 LAAKTKSHLHSQSPLLHAPQTEFTEIINHTPISCIAALHNSVDQFQIPTVSEPDPGSDSR 180

Query: 181 DQWGSTEPWGCDFPADIICSMLF 203
           D WGSTEPWGCDFPADIICSMLF
Sbjct: 181 DHWGSTEPWGCDFPADIICSMLF 203

[Close]

BLAST of IVF0025359 vs. NCBI nr
Match: XP_004142913.1 (transcription factor RAX3 [Cucumis sativus] >KGN62411.1 hypothetical protein Csa_018702 [Cucumis sativus])

HSP 1 Score: 407 bits (1045), Expect = 4.31e-143
Identity = 190/204 (93.14%), Postives = 196/204 (96.08%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKK-L 120
           YLRPNIKHGEFTEEEDNVIFNL+NQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKK L
Sbjct: 61  YLRPNIKHGEFTEEEDNVIFNLFNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKKL 120

Query: 121 FLAAKTKSHLHSQSPLLHAPQTEFTEIINHTPISCIAALHNSVDQFQIPTISEPDPGSDS 180
           FLAAKT+SHLHSQSPLLH  +T+FTEIINHTPISCIAAL NSVDQFQIPT+SEP  GSDS
Sbjct: 121 FLAAKTQSHLHSQSPLLHTQETDFTEIINHTPISCIAALDNSVDQFQIPTVSEPGAGSDS 180

Query: 181 RDQWGSTEPWGCDFPADIICSMLF 203
           RDQW S EPWGCDFPAD+ICSMLF
Sbjct: 181 RDQWSSMEPWGCDFPADMICSMLF 204

[Close]

BLAST of IVF0025359 vs. NCBI nr
Match: KAA0060982.1 (clathrin interactor EPSIN 1 [Cucumis melo var. makuwa])

HSP 1 Score: 398 bits (1022), Expect = 1.09e-130
Identity = 191/204 (93.63%), Postives = 191/204 (93.63%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAG          LKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAG----------LKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSR---WSTIASQLPGRTDNDVKNHWNTKLKKKK 120
           YLRPNIKHGEFTEEEDNVIFNLYNQYGSR   WSTIASQLPGRTDNDVKNHWNTKLKKKK
Sbjct: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRQVRWSTIASQLPGRTDNDVKNHWNTKLKKKK 120

Query: 121 KLFLAAKTKSHLHSQSPLLHAPQTEFTEIINHTPISCIAALHNSVDQFQIPTISEPDPGS 180
           KLFLAAKTKSHLHSQSPLLHAPQTEFTEIINHTPISCIAALHNSVDQFQIPTISEPDPGS
Sbjct: 121 KLFLAAKTKSHLHSQSPLLHAPQTEFTEIINHTPISCIAALHNSVDQFQIPTISEPDPGS 180

Query: 181 DSRDQWGSTEPWGCDFPADIICSM 201
           DSRDQWGSTEPWGCDFPADIICSM
Sbjct: 181 DSRDQWGSTEPWGCDFPADIICSM 194

[Close]

BLAST of IVF0025359 vs. NCBI nr
Match: XP_038886382.1 (transcription factor MYB36-like isoform X1 [Benincasa hispida])

HSP 1 Score: 334 bits (857), Expect = 2.42e-114
Identity = 166/212 (78.30%), Postives = 178/212 (83.96%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCCEKGKVKKGPWSPDED ILK YVETHG+AGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCEKGKVKKGPWSPDEDTILKRYVETHGVAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKLF 120
           YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKK LF
Sbjct: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKK-LF 120

Query: 121 LAAKTK----SHLHSQSPLLHAPQTEFTEIINHTPISCIAALHNSVDQFQIP-----TIS 180
           LA +TK    +HLHS+S LLH  +T+FTEIINH PIS  A L +SVDQF+IP     ++ 
Sbjct: 121 LAGQTKLQTHTHLHSKSSLLHVLETDFTEIINHPPIS-FAGLDDSVDQFEIPPVIGSSLF 180

Query: 181 EPDPGSDSRDQWGSTEPWGCDFPADIICSMLF 203
           EP    D RD+WG  E  G DFP D+I SMLF
Sbjct: 181 EPGVTVDGRDKWGLMEHGGYDFPPDMIFSMLF 210

[Close]

BLAST of IVF0025359 vs. NCBI nr
Match: XP_038886383.1 (transcription factor MYB87-like isoform X2 [Benincasa hispida])

HSP 1 Score: 305 bits (780), Expect = 9.13e-103
Identity = 156/212 (73.58%), Postives = 168/212 (79.25%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCCEKGKVKKGPWSPDED ILK YVETHG+AG          LKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCEKGKVKKGPWSPDEDTILKRYVETHGVAG----------LKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKLF 120
           YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKK LF
Sbjct: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKK-LF 120

Query: 121 LAAKTK----SHLHSQSPLLHAPQTEFTEIINHTPISCIAALHNSVDQFQIP-----TIS 180
           LA +TK    +HLHS+S LLH  +T+FTEIINH PIS  A L +SVDQF+IP     ++ 
Sbjct: 121 LAGQTKLQTHTHLHSKSSLLHVLETDFTEIINHPPIS-FAGLDDSVDQFEIPPVIGSSLF 180

Query: 181 EPDPGSDSRDQWGSTEPWGCDFPADIICSMLF 203
           EP    D RD+WG  E  G DFP D+I SMLF
Sbjct: 181 EPGVTVDGRDKWGLMEHGGYDFPPDMIFSMLF 200

[Close]

BLAST of IVF0025359 vs. TAIR 10
Match: AT5G65790.1 (myb domain protein 68 )

HSP 1 Score: 205.3 bits (521), Expect = 4.7e-53
Identity = 93/134 (69.40%), Postives = 106/134 (79.10%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCC+K  VKKGPWSP+EDA LK Y+E  G  G WIALP K GL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKDYIENSGTGGNWIALPQKIGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKK---- 120
           YLRPNIKHG F+EEEDN+I NLY   GSRWS IA+QLPGRTDND+KN+WNT+LKKK    
Sbjct: 61  YLRPNIKHGGFSEEEDNIICNLYVTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLNK 120

Query: 121 -KKLFLAAKTKSHL 130
            +K F  A+ K  +
Sbjct: 121 QRKEFQEARMKQEM 134

[Close]

BLAST of IVF0025359 vs. TAIR 10
Match: AT2G36890.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 204.1 bits (518), Expect = 1.0e-52
Identity = 89/129 (68.99%), Postives = 104/129 (80.62%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCC+K  VK+GPWSP+EDA LK Y+E  G  G WIALP KAGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKLF 120
           YLRPNI+HG+FTEEEDN+I++L+   GSRWS IA+ L GRTDND+KN+WNTKLKKK    
Sbjct: 61  YLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLKKKLIAT 120

Query: 121 LAAKTKSHL 130
           +A     HL
Sbjct: 121 MAPPPHHHL 129

[Close]

BLAST of IVF0025359 vs. TAIR 10
Match: AT3G49690.1 (myb domain protein 84 )

HSP 1 Score: 204.1 bits (518), Expect = 1.0e-52
Identity = 89/116 (76.72%), Postives = 100/116 (86.21%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCC+K  VKKGPWSP+EDA LKSY+E  G  G WIALP K GLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKK 117
           YLRPNIKHG F+EEE+N+I +LY   GSRWS IA+QLPGRTDND+KN+WNT+LKKK
Sbjct: 61  YLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKK 116

[Close]

BLAST of IVF0025359 vs. TAIR 10
Match: AT5G57620.1 (myb domain protein 36 )

HSP 1 Score: 202.2 bits (513), Expect = 3.9e-52
Identity = 87/116 (75.00%), Postives = 98/116 (84.48%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCC+K  VKKGPWSP+ED  LK Y++ +G  G WIALP K GLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKK 117
           YLRPNIKHG F+EEED +I +LY   GSRWS IA+QLPGRTDND+KN+WNTKLKKK
Sbjct: 61  YLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKK 116

[Close]

BLAST of IVF0025359 vs. TAIR 10
Match: AT5G23000.1 (myb domain protein 37 )

HSP 1 Score: 199.1 bits (505), Expect = 3.3e-51
Identity = 88/137 (64.23%), Postives = 109/137 (79.56%), Query Frame = 0


Query: 1   MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60
           MGRAPCC+K KVK+GPWSP+ED+ L+ Y+E +G  G WI+ P KAGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFTEEEDNVIFNLYNQYGSRWSTIASQLPGRTDNDVKNHWNTKLKKKKKLF 120
           YLRPNIKHG+F+EEED +IF+L+   GSRWS IA+ LPGRTDND+KN+WNTKL  +KKL 
Sbjct: 61  YLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKL--RKKLL 120

Query: 121 LAAKTKSHLHSQSPLLH 138
            ++   S     SP L+
Sbjct: 121 SSSSDSSSSAMASPYLN 135

The following BLAST results are available for this feature:

BLAST of IVF0025359 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJL7	1.5e-51	68.99	Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1	[more]
Q9M2Y9	1.5e-51	76.72	Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1	[more]
Q9FKL2	5.5e-51	75.00	Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1	[more]
Q9FG68	4.7e-50	64.23	Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1	[more]
F4JSU0	6.1e-50	67.42	Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1	[more]

BLAST of IVF0025359 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BB79	1.1e-118	99.01	transcription factor RAX3-like OS=Cucumis melo OX=3656 GN=LOC103487802 PE=4 SV=1	[more]
A0A0A0LR01	2.5e-110	93.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G352410 PE=4 SV=1	[more]
A0A5A7UYK8	1.1e-107	93.63	Clathrin interactor EPSIN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A6J1GH52	4.8e-74	67.30	transcription factor MYB36-like OS=Cucurbita moschata OX=3662 GN=LOC111454127 PE...	[more]
A0A6J1KQU4	1.6e-72	66.51	transcription factor MYB36-like OS=Cucurbita maxima OX=3661 GN=LOC111496394 PE=4...	[more]

BLAST of IVF0025359 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444504.1	4.35e-154	99.01	PREDICTED: transcription factor RAX3-like [Cucumis melo]	[more]
XP_004142913.1	4.31e-143	93.14	transcription factor RAX3 [Cucumis sativus] >KGN62411.1 hypothetical protein Csa...	[more]
KAA0060982.1	1.09e-130	93.63	clathrin interactor EPSIN 1 [Cucumis melo var. makuwa]	[more]
XP_038886382.1	2.42e-114	78.30	transcription factor MYB36-like isoform X1 [Benincasa hispida]	[more]
XP_038886383.1	9.13e-103	73.58	transcription factor MYB87-like isoform X2 [Benincasa hispida]	[more]

BLAST of IVF0025359 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65790.1	4.7e-53	69.40	myb domain protein 68	[more]
AT2G36890.1	1.0e-52	68.99	Duplicated homeodomain-like superfamily protein	[more]
AT3G49690.1	1.0e-52	76.72	myb domain protein 84	[more]
AT5G57620.1	3.9e-52	75.00	myb domain protein 36	[more]
AT5G23000.1	3.3e-51	64.23	myb domain protein 37	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 13..64 e-value: 6.4E-9 score: 45.6 coord: 67..115 e-value: 1.3E-15 score: 67.8
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 63..113 score: 10.696428
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 9..62 score: 10.359669
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 70..111 e-value: 3.61705E-12 score: 56.815
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 16..62 e-value: 4.53537E-7 score: 42.9478
None	No IPR available	GENE3D	1.10.10.60		coord: 7..68 e-value: 3.3E-17 score: 64.0
None	No IPR available	GENE3D	1.10.10.60		coord: 70..135 e-value: 1.6E-21 score: 78.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..189
None	No IPR available	PANTHER	PTHR48000	OS09G0431300 PROTEIN	coord: 1..145
None	No IPR available	PANTHER	PTHR48000:SF36	OS09G0431300 PROTEIN	coord: 1..145
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 69..111 e-value: 9.8E-14 score: 51.3 coord: 14..62 e-value: 3.1E-12 score: 46.5
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 9..62 score: 14.17283
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 63..117 score: 24.907761
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 12..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0025359.2	IVF0025359.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006623	protein targeting to vacuole
cellular_component	GO:0030136	clathrin-coated vesicle
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0030276	clathrin binding