IVF0025338 (gene) Melon (IVF77) v1

Overview


Name	IVF0025338
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	histone deacetylase HDT1-like
Location	chr11: 25985221 .. 25989764 (-)
RNA-Seq Expression	IVF0025338
Synteny	IVF0025338

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTTTGGGGTAAGCTACTTTTCCTTCTTTCTCTTTTTGGTTCAACCAAGTAGAGCTAGTAAGGTTCATACATGCTTTACGTTTTCCCCCATTCTTTCTGACCTTTGTTTATCCTGTTCTCATTGTATTATATGAGTTATATAATCTGTATCGTATGTCATACTTGGGTTTCTCCTTCTTTCACTCCCTTCTTCTCATACCTTTCCGTTGGAGTTGGCTGTAGTCCAGAAATGATGTTTGCCTCGTAATATTTGGATTGTGAAATGTCGACAGGGGTTGTTTAGTTCGTGGCTAATGAACTAAAACATTATGGTTTTGTGGTTGCAGGTGTCGAAGTCAAGGCTGGTCAGTCACTTATTGTGAAACCTGGAAATGAGAAATTGATTCATCTATCACAGGTATGTTTCTTGTTATAATGATAATGTGTGTTTGTATGTTTTCTCAGCTTAACCGTGGATTTCTGGTTTAGTTAACTTTTCCCATGGACTAGATTTAATGAAATGATTTTATACAGGCAACGCTAGGTGAAATAAAGAAGGACAAAGCAAGTGAAAACGTGACTATCTTTTTGAAAATTGGTGACCAAAAGCTTGTTTTGGGAATTCTCTCTGCAGAGAAGTTTCCTCAGCTATCATTTGATCTTGTGTTTGAGAAGGAATTTGAGCTCTCTCACAATGGGAAGAGTGGAAGTGTGTACTGTGCCGGATACCAGGCTTACGGGGATGATCATGAACAATATCCTTCCTTTGAAATTTGATAATTTGTATTTACCCTCGAGACGATAATAGGAAGCTTTAGCATTGTTTGATATGTTAACATTAGTTATTACTTTTTATTGCGTGGCAAACCCTAAAATTTGAAATATTTCATTATTATTTTGGAACTGTTTTCTTATAGCTGATTAATAATCTTAGTCAATGCATATTTAAATCAATTATCTTAGTAAGAAATTTTATAACTGTATTATACAATGTTTTAAAAATCTAAAGATGGCCTTGAGAGATGAGGCATTTAAAAGACTAAATCGTATTCTAAGTTAGTATGATCATGTATTAATAAGTATCGATAATTATCTAAGTTGGTATCAGTATGATCAAGTATTGGCAGTCATTTATAAAACATTGATGTTTTATACAGTGGCTTGTAGTATTTCTCTATTTTCAGTAGTTTGCAAGTTACATTGGTTTCCTTGACCTGCTCTTTGTTTCTCCTTGCCACCGATGGTTATCTTGGTAGGTCGAATGCTTTTTTTTTAAACAAACATCAGATCTATTTTCTTTGTATTGACTCTGGCTTCTTTTATTAGTTTGACTAGGCAATTGACTCAGTGTTTGTTATTTCTTTTCAGATTCTGATGCTGGCTCAGATGATGAAGAACTTCCCTTGGCCTCTGCTCAGAATGGTAAAGGCATCCCGCTATGACAATATTAGTATTTTTGGCTGTATTGTGCTTTGTGCATTTATTTTGTCATAATATACTTTCAGGAAAACCAAGCTCGAAGGATGTGAAACCTGGTTTGGTTGAAAGTAATAATGCAAAAAAGCTTCTCTGAAGAAGCCTTTGAAACCAAGCAAGGATGAGGACGACGTTTCTGAGGATGATGAATCTGATGATGATGAAGATTCTGATGACGAATCTGATGAGGTAGTATAAGAAAGATTCTCTATTTTATGGTATTCATTAAGAACTATTCCATACCAACCAAATATAAGTGATTCCATGATGAGCATTTTAATCAATTTAATTTTTATTTGAGTGAAATTCTTGTGTTATGGTTAGTCCAATAAAAAATTCCTTGGTTATTATTTCCTAACAAAAGAAGAAAAAATGTTAGTCCCATTGCTTATTCTGGTTGTCCTTTTCGGTTAACTTTGCGAGGTGACCAGGACATGAGATTTGATGTATTTTTGTCTTTCTGTGCTGTTCTGTCATTGGGCTTCTCATTCACATGACATATTTCAATTGCAAGGCCATGGCCATTTGGTCTTATTTGTATGCCACATTATGTGGCAAATATTATAAATCAGGATTATGATAGTTTTATGTATAAAATCATGTGAGAGGTCTCGTTATCTGGAGTTCAGTCTAGGATAGTTTATGATGACAATCTGATGGTTGAATGCTGACATGTACATTTGTGACAAATGGTAGGAAATGCTTGAGGGTGACAGCGGCGATTCTGATGAAGAAGATGATGACTCTGAAAGTGATGAGGAGACTCCGAAGAAGGTTGTGGGTCAACGTGACTGTTGTCATCTTTTTGTTTCTGTTTTATTGTTTGAACAATTGAATATAGATGGCATGATTTTGATTGTCTCTTGTCCTTGCAGGTTGAATCAGCCAAGAAGAGGTTGAATGAGTCTGCCACCAAGACGACACCCCTTCCCGCTAAGAAGGCGAAGTTAGCTACGCCCGAAAAGACTGGTAATTTATTGTGGCCATTTATTTATTTATTTCATCTGGTAACATCCTGGCATATAAGCATTCTTTACAAGAATGAGCGAACCATTTTAGACCTCTCTAGAATATCAAATTATAGTTGTTAGCCTTGCTCTATTAAGGTTGTTTGGGCCACCAGCTTTAAGTTGGTGGAGTGGCTGTTATAATTCCATTCCATGTATGGACGTCAATTACAGTGTTTCCGAATGTTAAGGCAGCCCATTAGCTTTGTCATTACACATGATCTTTATATTTTTCTATGGCCCATTAATGTAAAGCCCATTGAGAGCTTCTAGAAATAGTTTGTTATAATGGGTTTACTTTTGTGTGGGTGTGTTTAAATAAGGGTTTTTCATCCAGCTTTTGTTATATATTTGAACATCACTACCTTTCAAAAATATCAATGAAAGCTTGGGTTTCCCTTTTCAATAATTTCTACTCTCTTCTTAAACTTTAAAGATCGAACCATTATAACCAATGATCACTATTTGTTACCGTGCTTACTATTCTCTATCATTTTTCTCTCTTCTGAGTTCAATTTCATCTAAGTGGTTCTTAACCTGTTGGTTGTCTGATGCCAGATTCAAAGAAGGGGGGCCATACCGCGACTCCCCATCCAGCCAAGAAAACTGGTAAAACTCCTGCTGCTAAGTTGGAGACCCCAAATCTGGTGGCCAGTTTTCTTGCAAATCCTGTGACAGGTAACATTTGTTTTATTTGATTATTTGCTCAAATTAGAAGCAATTTTATGTTGACATTTTATTCCCCCAAAATTTTTAGGTCGTTCGTTTCCGATGGTGCACTTCAGTCGCACAGTAAAGCTAAGCATGGGGCTAAGTAAAACGAAGAGTGGCATATATTTTACAGGTTTAATATGTTTTTTTCTAGATAGGTTGAAATTTTGTTGAGAGTTGGGAATGTAGAACGAGAAATATGACTGTTCAACCTGAGGGAGATTAATTGATTTTGATAAACGTGTGCTTGTTTGTTGGTCTAGTTATGGTGTGTACTCGCAAGTATTATTCTTCCAAACAATGAATGTAGAATTGCCCCCTGTTCATGGGCTTTGCATTCCCCATCTTGGAACTCTATTTTTTTTTTCTCCCGAGGCAATGTGGAAGTGAAAAATGTTTCGTAAAGTCGTACAATGATTGTACCAATCTGATGATGGCCATCTATCTTATGAAATTGTAATAAATGTGGATTAATGATAGTTTTATGATGCGTGCCCACTGCATTGTTAAAGAATTGAAATGAAAAAAACCATTTGATAAGAAAATGTTCATATTGATTCAAAATAAATTTTGATTAGAAAATTGCACTCGAAGTGTGAAAATTCAGTATTAAATTAATTTTGAGCCGATGGTGGAAGGTGTTTTTGAATAACCAAACCTTAATTATTTATCAAGGAAATTGTTACTTCAACGATAGTGATTTGACATTGAAAACATGGTTCTTTAAGGATATTGATTCTTTCCACGTTCAAATCAGTATTGTGGTGTTGGGTTATCGATAGCTTTGACACTTTAAGTCAGTATTGAATTAATGAAAAGAGACCAATTAGTGAAACTAATCAATACATAATAGCTCAGCACTACTTACTAACTCTATACTGTTGATATTCTTGAAGCAATTATATTCATTTTTCCATATCAGCAATCATCCCCACGGATTACCACATGGTAAGACATATAGTTACATTGTGATAAGAAAAAAGGTTTGATGTTAGGAAAGCAAAGAGCTGGTTTGCCCGAGTGGTTAAGGGGGAAGACTTAAGATCTTCTGCACATAAGTGCGCGTGGGTTCGAACCCCACAGCCAGCATATTTTTCCTTTTTCTTTTTTACTTATCTTTCCCCCCTTCTAACTTCCAATAAATTCAAACACACACACACACACAATTTTATCTACTTCTTGCTTATATATATATATATAACTAAACCAAAATTAAAAAAAAAAAAAATTTCTTTTTTTATTCAGAATCCACCATTGTGGATCAGCAGGAACATGGGTAGAAAGCTTTCGAAGAAGATCCAAAAATATGATAATTTTTTTTGGATCTAAGCAGAAATTTAGAAATCGTAAATCTCTGATCATTTGA

mRNA sequence

ATGGAGTTTTGGGGTGTCGAAGTCAAGGCTGGTCAGTCACTTATTGTGAAACCTGGAAATGAGAAATTGATTCATCTATCACAGGCAACGCTAGGTGAAATAAAGAAGGACAAAGCAAGTGAAAACGTGACTATCTTTTTGAAAATTGGTGACCAAAAGCTTGTTTTGGGAATTCTCTCTGCAGAGAAGTTTCCTCAGCTATCATTTGATCTTGTGTTTGAGAAGGAATTTGAGCTCTCTCACAATGGGAAGAGTGGAAGTGTGTACTTTACATTGGTTTCCTTGACCTGCTCTTTGTTTCTCCTTGCCACCGATGGTTATCTTGATTCTGATGCTGGCTCAGATGATGAAGAACTTCCCTTGGCCTCTGCTCAGAATGGAAAACCAAGCTCGAAGGATGTGAAACCTGGTTTGGTTGAAAGTAATAATGCAAAAAACAAGGATGAGGACGACGTTTCTGAGGATGATGAATCTGATGATGATGAAGATTCTGATGACGAATCTGATGAGGAAATGCTTGAGGGTGACAGCGGCGATTCTGATGAAGAAGATGATGACTCTGAAAGTGATGAGGAGACTCCGAAGAAGGTTGAATCAGCCAAGAAGAGGTTGAATGAGTCTGCCACCAAGACGACACCCCTTCCCGCTAAGAAGGCGAAGTTAGCTACGCCCGAAAAGACTGATTCAAAGAAGGGGGGCCATACCGCGACTCCCCATCCAGCCAAGAAAACTGGTAAAACTCCTGCTGCTAAGTTGGAGACCCCAAATCTGGTGGCCAGTTTTCTTGCAAATCCTGTGACAGAAAGCTTTCGAAGAAGATCCAAAAATATGATAATTTTTTTTGGATCTAAGCAGAAATTTAGAAATCGTAAATCTCTGATCATTTGA

Coding sequence (CDS)

ATGGAGTTTTGGGGTGTCGAAGTCAAGGCTGGTCAGTCACTTATTGTGAAACCTGGAAATGAGAAATTGATTCATCTATCACAGGCAACGCTAGGTGAAATAAAGAAGGACAAAGCAAGTGAAAACGTGACTATCTTTTTGAAAATTGGTGACCAAAAGCTTGTTTTGGGAATTCTCTCTGCAGAGAAGTTTCCTCAGCTATCATTTGATCTTGTGTTTGAGAAGGAATTTGAGCTCTCTCACAATGGGAAGAGTGGAAGTGTGTACTTTACATTGGTTTCCTTGACCTGCTCTTTGTTTCTCCTTGCCACCGATGGTTATCTTGATTCTGATGCTGGCTCAGATGATGAAGAACTTCCCTTGGCCTCTGCTCAGAATGGAAAACCAAGCTCGAAGGATGTGAAACCTGGTTTGGTTGAAAGTAATAATGCAAAAAACAAGGATGAGGACGACGTTTCTGAGGATGATGAATCTGATGATGATGAAGATTCTGATGACGAATCTGATGAGGAAATGCTTGAGGGTGACAGCGGCGATTCTGATGAAGAAGATGATGACTCTGAAAGTGATGAGGAGACTCCGAAGAAGGTTGAATCAGCCAAGAAGAGGTTGAATGAGTCTGCCACCAAGACGACACCCCTTCCCGCTAAGAAGGCGAAGTTAGCTACGCCCGAAAAGACTGATTCAAAGAAGGGGGGCCATACCGCGACTCCCCATCCAGCCAAGAAAACTGGTAAAACTCCTGCTGCTAAGTTGGAGACCCCAAATCTGGTGGCCAGTTTTCTTGCAAATCCTGTGACAGAAAGCTTTCGAAGAAGATCCAAAAATATGATAATTTTTTTTGGATCTAAGCAGAAATTTAGAAATCGTAAATCTCTGATCATTTGA

Protein sequence

MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKDKASENVTIFLKIGDQKLVLGILSAEKFPQLSFDLVFEKEFELSHNGKSGSVYFTLVSLTCSLFLLATDGYLDSDAGSDDEELPLASAQNGKPSSKDVKPGLVESNNAKNKDEDDVSEDDESDDDEDSDDESDEEMLEGDSGDSDEEDDDSESDEETPKKVESAKKRLNESATKTTPLPAKKAKLATPEKTDSKKGGHTATPHPAKKTGKTPAAKLETPNLVASFLANPVTESFRRRSKNMIIFFGSKQKFRNRKSLII

Homology

[Close]

BLAST of IVF0025338 vs. ExPASy Swiss-Prot
Match: Q6V9I6 (Histone deacetylase HDT1 OS=Solanum chacoense OX=4108 GN=HDT1 PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 2.5e-44
Identity = 124/249 (49.80%), Postives = 163/249 (65.46%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKDKASENVTIFLKIGDQKLVLGILS 60
           MEFWG EVK+G+ L V+PG+  ++HLSQA+LGE+KKDK SE+V + + I  +KLVLG L+
Sbjct: 1   MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDK-SESVCLSVNIDGKKLVLGTLN 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSVYFTLVSLTCSLFLLATDGYLDSDAGSDDEELP 120
           +EK PQ  FDLVF+++FELSHN KSGSVYF     T        D   + D    DE++P
Sbjct: 61  SEKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATNPFEEEEDD---EDDYDESDEDIP 120

Query: 121 LASAQNGKPSSKDVKPGLVESNNAKNKDEDDVSEDDESDDDEDSDDESDEEMLEGDSGDS 180
           L  A +GKP  K+        ++A  K +  + E  + D+DE SDD+        DS   
Sbjct: 121 LTLANSGKPEPKEAGKSNAGKDSASGKQKVRIVEPTKDDEDESSDDD--------DSDMG 180

Query: 181 DEEDDDSESDEETPKKVESAKKRLNESATKTTPLPAKKAKLATPEKTDSKK-GGHTATPH 240
           ++EDD  +S+EETPKK E AK+R  +SATK TP+  KKAKL TP+KTD KK GGH ATPH
Sbjct: 181 EDEDDSDDSEEETPKKAEPAKRRKADSATK-TPVTDKKAKLTTPQKTDGKKGGGHVATPH 236

Query: 241 PAKKTGKTP 249
           P+K+  KTP
Sbjct: 241 PSKQASKTP 236

[Close]

BLAST of IVF0025338 vs. ExPASy Swiss-Prot
Match: Q8LJS2 (Histone deacetylase HDT1 OS=Glycine max OX=3847 GN=HDT1 PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 2.5e-44
Identity = 138/284 (48.59%), Postives = 174/284 (61.27%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGN--EKLIHLSQATLGEIKKDKASENVTIFLKIGDQKLVLGI 60
           MEFWGVEVK GQ++ V P +  +  IH+SQ  LGE KKDK +E V ++LK+G+QK+VLG 
Sbjct: 1   MEFWGVEVKVGQTVTVDPMDPVDSYIHISQVALGEAKKDKPNEPVVLYLKVGEQKIVLGT 60

Query: 61  LSAEKFPQLSFDLVFEKEFELSHNGKSGSVYFTLVSLTCSLFLLATDGYLD-SDAGSDDE 120
           LS +  P LS DLV + + ELSH  KS SV+F    +     L   D   D SD+  +DE
Sbjct: 61  LSRDGIPHLSLDLVLDSDSELSHTSKSASVFFCGYKV-----LTGNDNASDFSDSSEEDE 120

Query: 121 ELPLASAQNGKPSSKDVKPGLVESNNAKNK-DEDDVSEDDESDDDEDSDDESDEEML-EG 180
           EL L    NGKP  K     + + + +  K      + D + D+D+DSDDESD+++  E 
Sbjct: 121 ELALEGQDNGKPELKAEGAKVTKPSKSIPKIGAPAKAADPKKDEDDDSDDESDDDLAGED 180

Query: 181 DSGDSDEEDDDSES-------DEETP-KKVESAKKRLNESATKTTPLPAKKAKLATPEKT 240
           +SG SDE DDDS S       DEETP KKV+  KKR NESA K TP+ AKKAK ATPEKT
Sbjct: 181 ESGSSDEMDDDSNSEEESDGDDEETPAKKVDQGKKRPNESAAK-TPISAKKAKTATPEKT 240

Query: 241 DSKKGGHTATPHPAKKTGKTP-AAKLETPNLVASFLANPVTESF 271
           D KK  H ATPHP+KK GKTP + K +TPN           +SF
Sbjct: 241 DGKKSVHVATPHPSKKGGKTPNSTKGQTPNSAGQLSCASCKKSF 278

[Close]

BLAST of IVF0025338 vs. ExPASy Swiss-Prot
Match: Q9M4U4 (Histone deacetylase HDT3 OS=Zea mays OX=4577 GN=HDT3 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 7.8e-38
Identity = 125/264 (47.35%), Postives = 160/264 (60.61%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKDKASENVTIFLKIGDQKLVLGILS 60
           MEFWG+EVK G ++  +PG   ++HLSQA LGE KK   S+N  +++KI DQKL +G LS
Sbjct: 1   MEFWGLEVKPGSTVKCEPGYGFVLHLSQAALGESKK---SDNALMYVKIDDQKLAIGTLS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSVYFTLVSLTCSLFLLATDGYLDSDAGSDDEELP 120
            +K P + FDL+F+KEFELSH  K+ SV+FT   +         +  +D D+  +DEEL 
Sbjct: 61  VDKNPHIQFDLIFDKEFELSHTSKTTSVFFTGYKVEQPF----EEDEMDLDSEDEDEELN 120

Query: 121 L-ASAQNGKPSSKDVK--------PGLVESNNAKNKDEDDVSEDDESDDDEDSDDESDEE 180
           + A  +NGK   K  K        P     ++ K+KD+DD  ED+  D DED  D+SDE 
Sbjct: 121 VPAVKENGKADEKKQKSQEKAVAAPSKSSPDSKKSKDDDDSDEDETDDSDEDETDDSDEG 180

Query: 181 ML--EGDSGDSDEED--DDSESDEETPKKVESAKKRLNESATKTTPLPAKKAKLATP--E 240
           +   EGD   SDE+D  DD E D  TPKK E  KKR  ES+   TPL  KKAK+ATP  +
Sbjct: 181 LSPEEGDDDSSDEDDTSDDEEEDTPTPKKPEVGKKRAAESSVLKTPLSDKKAKVATPSSQ 240

Query: 241 KTDSKKGG--HTATPHPAKKTGKT 248
           KT  KKG   H ATPHPAK  GKT
Sbjct: 241 KTGGKKGAAVHVATPHPAK--GKT 255

[Close]

BLAST of IVF0025338 vs. ExPASy Swiss-Prot
Match: O24591 (Histone deacetylase HDT1 OS=Zea mays OX=4577 GN=HDT1 PE=1 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 6.6e-37
Identity = 127/292 (43.49%), Postives = 166/292 (56.85%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKDKASENVTIFLKIGDQKLVLGILS 60
           MEFWG+EVK G ++  +PG   ++HLSQA LGE KK   S+N  +++KI DQKL +G LS
Sbjct: 1   MEFWGLEVKPGSTVKCEPGYGFVLHLSQAALGESKK---SDNALMYVKIDDQKLAIGTLS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSVYFTLVSLTCSLFLLATDGYLDSDAGSDDEELP 120
            +K P + FDL+F+KEFELSH  K+ SV+FT   +         +  +D D+  +DEEL 
Sbjct: 61  VDKNPHIQFDLIFDKEFELSHTSKTTSVFFTGYKVEQPF----EEDEMDLDSEDEDEELN 120

Query: 121 L-ASAQNGKPSSKDVK--------PGLVESNNAKNKDEDDVSEDDESDDDEDSDDESDEE 180
           +    +NGK   K  K        P     ++ K+KD+DD  ED+  D DED  D+SDE 
Sbjct: 121 VPVVKENGKADEKKQKSQEKAVAAPSKSSPDSKKSKDDDDSDEDETDDSDEDETDDSDEG 180

Query: 181 ML--EGDSGDSDEED--DDSESDEETPKKVESAKKRLNESATKTTPLPAKKAKLATP--E 240
           +   EGD   SDE+D  DD E D  TPKK E  KKR  ES+   TPL  KKAK+ATP  +
Sbjct: 181 LSSEEGDDDSSDEDDTSDDEEEDTPTPKKPEVGKKRPAESSVLKTPLSDKKAKVATPSSQ 240

Query: 241 KTDSKKGG--HTATPHPAK-----KTGKTPAAKLETPNLVASFLANPVTESF 271
           KT  KKG   H ATPHPAK        K+  +    P    S    P ++SF
Sbjct: 241 KTGGKKGAAVHVATPHPAKGKTIVNNDKSVKSPKSAPKSGGSVPCKPCSKSF 285

[Close]

BLAST of IVF0025338 vs. ExPASy Swiss-Prot
Match: Q9M4U5 (Histone deacetylase HDT2 OS=Zea mays OX=4577 GN=HDT2 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.1e-35
Identity = 126/271 (46.49%), Postives = 171/271 (63.10%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKDKASENVTIFLKIGDQKLVLGILS 60
           MEFWG+EVK G ++  +PG+  ++H+SQA LGE KK   S++  +++K+ D+KL +G LS
Sbjct: 1   MEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK---SDSALMYVKVDDKKLAIGTLS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSVYFTLVSLTCSLFLLATDGYLDSDAGSDDEELP 120
            +K+PQ+ FDLVF KEFELSH  K+ SV+F+   +   +        +D D+  ++EEL 
Sbjct: 61  IDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQPI----EGDEMDLDSEDEEEELN 120

Query: 121 L-ASAQNGKPSSKDVKPGLVESNNA-----------KNKDEDDVSEDDESDD-DEDSDDE 180
           +    +NGK   K+ +    ++  A           K+KD+ D S++DESDD DED  D+
Sbjct: 121 IPVIKENGKADGKEEQKNQEKAVAATASKSSLGLEKKSKDDSDDSDEDESDDSDEDDSDD 180

Query: 181 SDE-EMLEGDSGDSD--EEDDDSESDEE---TPKKVESAKKRLNESATKTTPLPAKKAKL 240
           SDE E L  D GD D  +EDD S+ DEE   TPKK E+ KKR  E+A K TPL  KKAK+
Sbjct: 181 SDEGEGLSPDEGDDDSSDEDDTSDDDEEETPTPKKPEAGKKRGAENALK-TPLSDKKAKV 240

Query: 241 ATP--EKTDSKKGG-HTATPHPAKKTGKTPA 250
           ATP  +KT  KKG  H ATPHPAK  GKTPA
Sbjct: 241 ATPPAQKTGGKKGATHVATPHPAK--GKTPA 261

[Close]

BLAST of IVF0025338 vs. ExPASy TrEMBL
Match: A0A1S3C9I8 (histone deacetylase HDT1-like OS=Cucumis melo OX=3656 GN=LOC103497976 PE=3 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 5.5e-111
Identity = 243/285 (85.26%), Postives = 246/285 (86.32%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKDKASENVTIFLKIGDQKLVLGILS 60
           MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKDKASENVTIFLKIGDQKLVLGILS
Sbjct: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKDKASENVTIFLKIGDQKLVLGILS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSVYFTLVSLTCSLFLL-----ATDGYLDSDAGSD 120
           AEKFPQLSFDLVFEKEFELSHNGKSGSVY       C+ +         DGYLDSDAGSD
Sbjct: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSVY-------CAGYQAYGDDHEHDGYLDSDAGSD 120

Query: 121 DEELPLASAQNGKPSSKDVKPGLVESNNAK----------NKDEDDVSEDDESDDDEDSD 180
           DEELPLASAQNGKPSSKDVKPGLVESNNAK          +KDEDDVSEDDESDDDEDSD
Sbjct: 121 DEELPLASAQNGKPSSKDVKPGLVESNNAKKASLKKPLKPSKDEDDVSEDDESDDDEDSD 180

Query: 181 DESDEEMLEGDSGDSDEEDDDSESDEETPKKVESAKKRLNESATKTTPLPAKKAKLATPE 240
           DESDEEMLEGDSGDSDEEDDDSESDEETPKKVESAKKRLNESATKTTPLPAKKAKLATPE
Sbjct: 181 DESDEEMLEGDSGDSDEEDDDSESDEETPKKVESAKKRLNESATKTTPLPAKKAKLATPE 240

Query: 241 KTDSKKGGHTATPHPAKKTGKTPAAKLETPNLVASFLANPVTESF 271
           KTDSKKGGHTATPHPAKKTGKTPAAKLETP     F       SF
Sbjct: 241 KTDSKKGGHTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSF 278

[Close]

BLAST of IVF0025338 vs. ExPASy TrEMBL
Match: A0A0A0KB05 (Histone deacetylase 2a OS=Cucumis sativus OX=3659 GN=Csa_6G150540 PE=3 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 2.6e-105
Identity = 233/282 (82.62%), Postives = 244/282 (86.52%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKDKASENVTIFLKIGDQKLVLGILS 60
           MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKK+KA+ENVTIFLKIGDQKLVLGILS
Sbjct: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSV--YFTLVSLTCSLFLLATDGYLDSDAGSDDEE 120
            EKFPQLSFDLVFEKEFELSHNGKSGSV    TLVSLTCS FLL TDGYLDSD+ S+DEE
Sbjct: 61  GEKFPQLSFDLVFEKEFELSHNGKSGSVSLQLTLVSLTCS-FLLTTDGYLDSDSASEDEE 120

Query: 121 LPLASAQNGKPSSKDVKPGLVESNNAK----------NKDEDDVSEDDESDDDEDSDDES 180
           LPL SA NGKPS K VKPGLVESN+AK          +KD+D+ SEDDESD DEDSDDES
Sbjct: 121 LPLVSAPNGKPSPKGVKPGLVESNDAKKASLKKPLKPSKDDDEDSEDDESDGDEDSDDES 180

Query: 181 DEEMLEGDSGDSDEEDDDSESDEETPKKVESAKKRLNESATKTTPLPAKKAKLATPEKTD 240
           DEEML+GD  +SDEEDDDSESDEETPKKVESAKKRLNESATKTTP+PAKKAKLATPEKTD
Sbjct: 181 DEEMLDGD--NSDEEDDDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLATPEKTD 240

Query: 241 SKKGGHTATPHPAKKTGKTPAAKLETPNLVASFLANPVTESF 271
           SKKGGHTATPHPAKKTGKTPAAKLETP     F       SF
Sbjct: 241 SKKGGHTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSF 279

[Close]

BLAST of IVF0025338 vs. ExPASy TrEMBL
Match: A0A6J1FU30 (histone deacetylase HDT1-like OS=Cucurbita moschata OX=3662 GN=LOC111448146 PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 6.6e-88
Identity = 203/285 (71.23%), Postives = 222/285 (77.89%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKDKASENVTIFLKIGDQKLVLGILS 60
           MEFWGVEVK+G+ L+VKPG +K +HLSQATLGEIKKDKA+ENVTIFLKIGDQKLVLGILS
Sbjct: 1   MEFWGVEVKSGKPLVVKPGIQKYLHLSQATLGEIKKDKANENVTIFLKIGDQKLVLGILS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSVYFTLVSLTCSLFLLATDGYLDSDAGSDDEELP 120
           AEKFPQLSFDLVFEKEFELSHNGKSGSVY               DGY DSD+GS+DEEL 
Sbjct: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSVY--CAGYQAFAEDQEQDGYFDSDSGSEDEELA 120

Query: 121 LASAQNGKPSSKDVKPGLVESNNAK--------------NKDEDDVS-EDDESDDDEDSD 180
           L  AQNGKPS K+ K    +SN AK              +KDEDD S +DDESD+DEDSD
Sbjct: 121 LPPAQNGKPSQKEEKSISDKSNGAKAASLKKPNVKPLEPSKDEDDESDDDDESDEDEDSD 180

Query: 181 DESDEEMLEGDSGDSDEEDDDSESDEETPKKVESAKKRLNESATKTTPLPAKKAKLATPE 240
           DESDEEML  DSGDSD+EDDDS+SDEETPKK+E  KKR NESATKTTPLPAKKAKLA+P 
Sbjct: 181 DESDEEMLNADSGDSDDEDDDSDSDEETPKKIEPTKKRPNESATKTTPLPAKKAKLASPG 240

Query: 241 KTDSKKGGHTATPHPAKKTGKTPAAKLETPNLVASFLANPVTESF 271
           KTDSKKGGHTATPHPAKKTGKTPAAKLE+P     F       +F
Sbjct: 241 KTDSKKGGHTATPHPAKKTGKTPAAKLESPKSGGQFSCKSCDRAF 283

[Close]

BLAST of IVF0025338 vs. ExPASy TrEMBL
Match: A0A6J1JAV1 (histone deacetylase HDT1-like OS=Cucurbita maxima OX=3661 GN=LOC111484116 PE=3 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 9.5e-87
Identity = 202/290 (69.66%), Postives = 223/290 (76.90%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKDKASENVTIFLKIGDQKLVLGILS 60
           MEFWGVEVK+G+ L+VKPG +K +HLSQATLGEIKKDKA+ENVTIFLKIG QKLVLGILS
Sbjct: 1   MEFWGVEVKSGKPLVVKPGIQKYLHLSQATLGEIKKDKANENVTIFLKIGGQKLVLGILS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSVYFTLVSLTCSLFLLAT-----DGYLDSDAGSD 120
           AEKFPQLSFDLVFEKEFELSHNGKSGSVY       C+ +         DGY DSD+GS+
Sbjct: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSVY-------CAGYQAFAEDQEHDGYFDSDSGSE 120

Query: 121 DEELPLASAQNGKPSSKDVKPGLVESNNAK--------------NKDEDDVS-EDDESDD 180
           DEEL L  AQNGKPS K+ K    +SN AK              +KDEDD S EDDESD+
Sbjct: 121 DEELALPPAQNGKPSQKEEKSISDKSNGAKAASLKKPNVKPLEPSKDEDDESDEDDESDE 180

Query: 181 DEDSDDESDEEMLEGDSGDSDEEDDDSESDEETPKKVESAKKRLNESATKTTPLPAKKAK 240
           D+DSDDESDEEML  DSGDSD+EDDDS+SDEETPKK+E  KKR NESATKTTPLPAKKAK
Sbjct: 181 DDDSDDESDEEMLNADSGDSDDEDDDSDSDEETPKKIEPTKKRSNESATKTTPLPAKKAK 240

Query: 241 LATPEKTDSKKGGHTATPHPAKKTGKTPAAKLETPNLVASFLANPVTESF 271
           LA+P KTDSKKGGHTATPHPAKKTGKTP AKLE+P     F       +F
Sbjct: 241 LASPGKTDSKKGGHTATPHPAKKTGKTPVAKLESPKSGGQFSCKSCDRAF 283

[Close]

BLAST of IVF0025338 vs. ExPASy TrEMBL
Match: A0A5A7SSE8 (Histone deacetylase HDT1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00220 PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.6e-81
Identity = 194/292 (66.44%), Postives = 219/292 (75.00%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKDKASENVTIFLKIGDQKLVLGILS 60
           MEFWGVEVK GQ+L V+PG+   +HLSQATLG++KKDKA++ VTIFLKI DQKLVLG+LS
Sbjct: 1   MEFWGVEVKPGQALSVQPGDMNYVHLSQATLGDLKKDKANDPVTIFLKIDDQKLVLGVLS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSVYFTLVSLTCSLFLLATDGY---------LDSD 120
           A+KFPQ+SFDLVFEKEFELSHNGK GS+Y       C  +    +           + SD
Sbjct: 61  ADKFPQISFDLVFEKEFELSHNGKGGSIY-------CLGYRAPMEDQGQYPFQFENMYSD 120

Query: 121 AGSDDEELPLASAQNGKPSSKD---------VKPGLVESNNAK----NKDEDDVSEDDES 180
            GS+DEEL L SA+NGKPS K+         +KP   +  +AK    +K+EDD SEDD+S
Sbjct: 121 FGSEDEELGLLSAENGKPSDKEKSIGGKIFGLKPESSKKADAKSIEPSKEEDDDSEDDDS 180

Query: 181 DDDEDSDDESDEEMLEGDSGDSDEEDDDSESDEETPKKVESAKKRLNESATKTTPLPAKK 240
            D+    DESDEEMLEGDSGDSDEEDDDSESDEETPKKVESAKKRLNESATKTTPLPAKK
Sbjct: 181 SDEGSDSDESDEEMLEGDSGDSDEEDDDSESDEETPKKVESAKKRLNESATKTTPLPAKK 240

Query: 241 AKLATPEKTDSKKGGHTATPHPAKKTGKTPAAKLETPNLVASFLANPVTESF 271
           AKLATPEKTDSKKGGHTATPHPAKKTGKTPAAKLETP     F       SF
Sbjct: 241 AKLATPEKTDSKKGGHTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSF 285

[Close]

BLAST of IVF0025338 vs. NCBI nr
Match: XP_008458629.1 (PREDICTED: histone deacetylase HDT1-like [Cucumis melo])

HSP 1 Score: 410 bits (1054), Expect = 1.85e-141
Identity = 243/285 (85.26%), Postives = 246/285 (86.32%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKDKASENVTIFLKIGDQKLVLGILS 60
           MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKDKASENVTIFLKIGDQKLVLGILS
Sbjct: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKDKASENVTIFLKIGDQKLVLGILS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSVYFTLVSLTCSLFLL-----ATDGYLDSDAGSD 120
           AEKFPQLSFDLVFEKEFELSHNGKSGSVY       C+ +         DGYLDSDAGSD
Sbjct: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSVY-------CAGYQAYGDDHEHDGYLDSDAGSD 120

Query: 121 DEELPLASAQNGKPSSKDVKPGLVESNNAK----------NKDEDDVSEDDESDDDEDSD 180
           DEELPLASAQNGKPSSKDVKPGLVESNNAK          +KDEDDVSEDDESDDDEDSD
Sbjct: 121 DEELPLASAQNGKPSSKDVKPGLVESNNAKKASLKKPLKPSKDEDDVSEDDESDDDEDSD 180

Query: 181 DESDEEMLEGDSGDSDEEDDDSESDEETPKKVESAKKRLNESATKTTPLPAKKAKLATPE 240
           DESDEEMLEGDSGDSDEEDDDSESDEETPKKVESAKKRLNESATKTTPLPAKKAKLATPE
Sbjct: 181 DESDEEMLEGDSGDSDEEDDDSESDEETPKKVESAKKRLNESATKTTPLPAKKAKLATPE 240

Query: 241 KTDSKKGGHTATPHPAKKTGKTPAAKLETPNLVASFLANPVTESF 270
           KTDSKKGGHTATPHPAKKTGKTPAAKLETP     F       SF
Sbjct: 241 KTDSKKGGHTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSF 278

[Close]

BLAST of IVF0025338 vs. NCBI nr
Match: XP_011657054.1 (histone deacetylase HDT1 isoform X1 [Cucumis sativus])

HSP 1 Score: 372 bits (956), Expect = 1.43e-126
Identity = 224/286 (78.32%), Postives = 237/286 (82.87%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKDKASENVTIFLKIGDQKLVLGILS 60
           MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKK+KA+ENVTIFLKIGDQKLVLGILS
Sbjct: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSVYFTLVSLTCSLFLLA------TDGYLDSDAGS 120
            EKFPQLSFDLVFEKEFELSHNGKSGSVY       C+ +         TDGYLDSD+ S
Sbjct: 61  GEKFPQLSFDLVFEKEFELSHNGKSGSVY-------CAGYQAYGDDHEHTDGYLDSDSAS 120

Query: 121 DDEELPLASAQNGKPSSKDVKPGLVESNNAK----------NKDEDDVSEDDESDDDEDS 180
           +DEELPL SA NGKPS K VKPGLVESN+AK          +KD+D+ SEDDESD DEDS
Sbjct: 121 EDEELPLVSAPNGKPSPKGVKPGLVESNDAKKASLKKPLKPSKDDDEDSEDDESDGDEDS 180

Query: 181 DDESDEEMLEGDSGDSDEEDDDSESDEETPKKVESAKKRLNESATKTTPLPAKKAKLATP 240
           DDESDEEML+GD+  SDEEDDDSESDEETPKKVESAKKRLNESATKTTP+PAKKAKLATP
Sbjct: 181 DDESDEEMLDGDN--SDEEDDDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLATP 240

Query: 241 EKTDSKKGGHTATPHPAKKTGKTPAAKLETPNLVASFLANPVTESF 270
           EKTDSKKGGHTATPHPAKKTGKTPAAKLETP     F       SF
Sbjct: 241 EKTDSKKGGHTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSF 277

[Close]

BLAST of IVF0025338 vs. NCBI nr
Match: XP_004145780.1 (histone deacetylase HDT1 isoform X2 [Cucumis sativus])

HSP 1 Score: 371 bits (952), Expect = 5.58e-126
Identity = 223/285 (78.25%), Postives = 236/285 (82.81%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKDKASENVTIFLKIGDQKLVLGILS 60
           MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKK+KA+ENVTIFLKIGDQKLVLGILS
Sbjct: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSVYFTLVSLTCSLFLL-----ATDGYLDSDAGSD 120
            EKFPQLSFDLVFEKEFELSHNGKSGSVY       C+ +         DGYLDSD+ S+
Sbjct: 61  GEKFPQLSFDLVFEKEFELSHNGKSGSVY-------CAGYQAYGDDHEQDGYLDSDSASE 120

Query: 121 DEELPLASAQNGKPSSKDVKPGLVESNNAK----------NKDEDDVSEDDESDDDEDSD 180
           DEELPL SA NGKPS K VKPGLVESN+AK          +KD+D+ SEDDESD DEDSD
Sbjct: 121 DEELPLVSAPNGKPSPKGVKPGLVESNDAKKASLKKPLKPSKDDDEDSEDDESDGDEDSD 180

Query: 181 DESDEEMLEGDSGDSDEEDDDSESDEETPKKVESAKKRLNESATKTTPLPAKKAKLATPE 240
           DESDEEML+GD+  SDEEDDDSESDEETPKKVESAKKRLNESATKTTP+PAKKAKLATPE
Sbjct: 181 DESDEEMLDGDN--SDEEDDDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLATPE 240

Query: 241 KTDSKKGGHTATPHPAKKTGKTPAAKLETPNLVASFLANPVTESF 270
           KTDSKKGGHTATPHPAKKTGKTPAAKLETP     F       SF
Sbjct: 241 KTDSKKGGHTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSF 276

[Close]

BLAST of IVF0025338 vs. NCBI nr
Match: KAE8646904.1 (hypothetical protein Csa_020859 [Cucumis sativus])

HSP 1 Score: 353 bits (906), Expect = 2.73e-119
Identity = 214/280 (76.43%), Postives = 226/280 (80.71%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKDKASENVTIFLKIGDQKLVLGILS 60
           MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKK+KA+ENVTIFLKIGDQKLVLGILS
Sbjct: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKEKANENVTIFLKIGDQKLVLGILS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSVYFTLVSLTCSLFLLATDGYLDSDAGSDDEELP 120
            EKFPQLSFDLVFEKEFELSHNGKSG+                      SD+ S+DEELP
Sbjct: 61  GEKFPQLSFDLVFEKEFELSHNGKSGN----------------------SDSASEDEELP 120

Query: 121 LASAQNGKPSSKDVKPGLVESNNAK----------NKDEDDVSEDDESDDDEDSDDESDE 180
           L SA NGKPS K VKPGLVESN+AK          +KD+D+ SEDDESD DEDSDDESDE
Sbjct: 121 LVSAPNGKPSPKGVKPGLVESNDAKKASLKKPLKPSKDDDEDSEDDESDGDEDSDDESDE 180

Query: 181 EMLEGDSGDSDEEDDDSESDEETPKKVESAKKRLNESATKTTPLPAKKAKLATPEKTDSK 240
           EML+GD+  SDEEDDDSESDEETPKKVESAKKRLNESATKTTP+PAKKAKLATPEKTDSK
Sbjct: 181 EMLDGDN--SDEEDDDSESDEETPKKVESAKKRLNESATKTTPVPAKKAKLATPEKTDSK 240

Query: 241 KGGHTATPHPAKKTGKTPAAKLETPNLVASFLANPVTESF 270
           KGGHTATPHPAKKTGKTPAAKLETP     F       SF
Sbjct: 241 KGGHTATPHPAKKTGKTPAAKLETPKSGGQFSCKSCDRSF 256

[Close]

BLAST of IVF0025338 vs. NCBI nr
Match: XP_022943359.1 (histone deacetylase HDT1-like [Cucurbita moschata])

HSP 1 Score: 333 bits (855), Expect = 3.85e-111
Identity = 204/290 (70.34%), Postives = 225/290 (77.59%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKDKASENVTIFLKIGDQKLVLGILS 60
           MEFWGVEVK+G+ L+VKPG +K +HLSQATLGEIKKDKA+ENVTIFLKIGDQKLVLGILS
Sbjct: 1   MEFWGVEVKSGKPLVVKPGIQKYLHLSQATLGEIKKDKANENVTIFLKIGDQKLVLGILS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSVYFTLVSLTCSLFLLAT-----DGYLDSDAGSD 120
           AEKFPQLSFDLVFEKEFELSHNGKSGSVY       C+ +         DGY DSD+GS+
Sbjct: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSVY-------CAGYQAFAEDQEQDGYFDSDSGSE 120

Query: 121 DEELPLASAQNGKPSSKDVKPGLVESNNAK--------------NKDEDDVSEDD-ESDD 180
           DEEL L  AQNGKPS K+ K    +SN AK              +KDEDD S+DD ESD+
Sbjct: 121 DEELALPPAQNGKPSQKEEKSISDKSNGAKAASLKKPNVKPLEPSKDEDDESDDDDESDE 180

Query: 181 DEDSDDESDEEMLEGDSGDSDEEDDDSESDEETPKKVESAKKRLNESATKTTPLPAKKAK 240
           DEDSDDESDEEML  DSGDSD+EDDDS+SDEETPKK+E  KKR NESATKTTPLPAKKAK
Sbjct: 181 DEDSDDESDEEMLNADSGDSDDEDDDSDSDEETPKKIEPTKKRPNESATKTTPLPAKKAK 240

Query: 241 LATPEKTDSKKGGHTATPHPAKKTGKTPAAKLETPNLVASFLANPVTESF 270
           LA+P KTDSKKGGHTATPHPAKKTGKTPAAKLE+P     F       +F
Sbjct: 241 LASPGKTDSKKGGHTATPHPAKKTGKTPAAKLESPKSGGQFSCKSCDRAF 283

[Close]

BLAST of IVF0025338 vs. TAIR 10
Match: AT5G22650.2 (histone deacetylase 2B )

HSP 1 Score: 144.8 bits (364), Expect = 1.1e-34
Identity = 117/277 (42.24%), Postives = 159/277 (57.40%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKDKASENVTIFLKIGDQKLVLGILS 60
           MEFWGV V    +  V P  + L+H+SQA+L      K+ E+V + + +G  KLV+G LS
Sbjct: 1   MEFWGVAVTPKNATKVTPEEDSLVHISQASLD--CTVKSGESVVLSVTVGGAKLVIGTLS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSVYFTLVSLTCSLFLLATDGYLDSDAGSDDEEL- 120
            +KFPQ+SFDLVF+KEFELSH+G   +V+F        +   + +   D    SDDE++ 
Sbjct: 61  QDKFPQISFDLVFDKEFELSHSGTKANVHF--------IGYKSPNIEQDDFTSSDDEDVP 120

Query: 121 -------PLASAQNGKPSSKDV--------KPGLVESNNAKNKDEDDVSEDDESDDDEDS 180
                  P A   NG   +  V        KP  V+    K + +++   DDE + +ED 
Sbjct: 121 EAVPAPAPTAVTANGNAGAAVVKADTKPKAKPAEVKPAEEKPESDEEDESDDEDESEEDD 180

Query: 181 DDESDEEMLEGDSGDSDEEDDDSESDEETPKKVESA-KKRLNESATKTTPLPAKKAKLA- 240
           D E   ++ E DS D +EED + E +EETPKK E   KKR NES +K TP+  KKAK A 
Sbjct: 181 DSEKGMDVDEDDSDDDEEEDSEDEEEEETPKKPEPINKKRPNESVSK-TPVSGKKAKPAA 240

Query: 241 ----TPEKTDSKKGGHTATPHPAKKTGKTPAAKLETP 256
               TP+KT+ KKGGHTATPHPAKK GK+P    ++P
Sbjct: 241 APASTPQKTEKKKGGHTATPHPAKKGGKSPVNANQSP 266

[Close]

BLAST of IVF0025338 vs. TAIR 10
Match: AT5G22650.1 (histone deacetylase 2B )

HSP 1 Score: 140.2 bits (352), Expect = 2.7e-33
Identity = 117/278 (42.09%), Postives = 159/278 (57.19%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKDKASENVTIFLKIGDQKLVLGILS 60
           MEFWGV V    +  V P  + L+H+SQA+L      K+ E+V + + +G  KLV+G LS
Sbjct: 1   MEFWGVAVTPKNATKVTPEEDSLVHISQASLD--CTVKSGESVVLSVTVGGAKLVIGTLS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSVYFTLVSLTCSLFLLATDGYLDSDAGSDDEEL- 120
            +KFPQ+SFDLVF+KEFELSH+G   +V+F        +   + +   D    SDDE++ 
Sbjct: 61  QDKFPQISFDLVFDKEFELSHSGTKANVHF--------IGYKSPNIEQDDFTSSDDEDVP 120

Query: 121 -------PLASAQNGKPSSKDV--------KPGLVESNNAKNKDEDDVSEDDESDDDEDS 180
                  P A   NG   +  V        KP  V+    K + +++   DDE + +ED 
Sbjct: 121 EAVPAPAPTAVTANGNAGAAVVKADTKPKAKPAEVKPAEEKPESDEEDESDDEDESEEDD 180

Query: 181 DDESDEEMLEGDSGDSDEEDDDSESDEETPKKVESA-KKRLNESATKTTPLPAKKAKLA- 240
           D E   ++ E DS D +EED + E +EETPKK E   KKR NES +K TP+  KKAK A 
Sbjct: 181 DSEKGMDVDEDDSDDDEEEDSEDEEEEETPKKPEPINKKRPNESVSK-TPVSGKKAKPAA 240

Query: 241 ----TPEKT-DSKKGGHTATPHPAKKTGKTPAAKLETP 256
               TP+KT + KKGGHTATPHPAKK GK+P    ++P
Sbjct: 241 APASTPQKTEEKKKGGHTATPHPAKKGGKSPVNANQSP 267

[Close]

BLAST of IVF0025338 vs. TAIR 10
Match: AT5G03740.1 (histone deacetylase 2C )

HSP 1 Score: 136.0 bits (341), Expect = 5.0e-32
Identity = 117/286 (40.91%), Postives = 161/286 (56.29%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKDKASENVTIFLKIGDQKLVLGILS 60
           MEFWGVEVK G+ L + PG ++L+H+SQ  LGE  K+  +E + +++ +G  KL++G LS
Sbjct: 1   MEFWGVEVKNGKPLHLDPGLDRLVHISQVALGE-SKNNVTEPIQLYVTVGSDKLLIGTLS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSVYFTLVSLTCSLFLLATDGYLDSDAGSDDEELP 120
            EKFPQLS ++V E+ F LSH  K+GSV+F+   +         D          D++L 
Sbjct: 61  HEKFPQLSTEIVLERNFALSHTWKNGSVFFSGYKV---------DASDPEPEDLIDDQLE 120

Query: 121 LASAQNG-KPSSKDVKPGLV-ESNNAKNKDEDDVSEDDESDDD--EDSDDESDEEM-LEG 180
            A  +   K ++K V   L  E   AK  D+ D SE+D SDDD  E+S DE +E++  E 
Sbjct: 121 AAGFKAAPKSAAKQVNFQLPNEDVKAKQDDDADGSEEDSSDDDDSENSGDEEEEKVTAES 180

Query: 181 DSGDSDEEDD--DSESDEETPKKVESAKKRLNESATKTTPLPAKKAKLATPEKTDSKKGG 240
           DS + D  DD  D  S+EETPKK E  KKR  E  +   P   KKAK  TP+KTDSKK  
Sbjct: 181 DSEEDDSSDDEEDDSSEEETPKKPEEPKKRSAEPNSSKNPASNKKAKFVTPQKTDSKKPH 240

Query: 241 -HTATPHPAKKTGKT--------PAAKLETPNLVASFLANPVTESF 271
            H ATPHP+K+ GK          + + +TP    +F     T +F
Sbjct: 241 VHVATPHPSKQAGKNSGGGSTGETSKQQQTPKSAGAFGCKSCTRTF 276

[Close]

BLAST of IVF0025338 vs. TAIR 10
Match: AT3G44750.1 (histone deacetylase 3 )

HSP 1 Score: 126.3 bits (316), Expect = 4.0e-29
Identity = 110/246 (44.72%), Postives = 141/246 (57.32%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKDKASENVTIFLKIGDQKLVLGILS 60
           MEFWG+EVK+G+ + V P    LIH+SQA+LGE  K+K  E V + +K+G+Q LVLG LS
Sbjct: 1   MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGEC-KNKKGEFVPLHVKVGNQNLVLGTLS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSVYFTLVSLTCSLFLLATDGYLDSDAGSDDEELP 120
            E  PQL  DLVF+KEFELSH    GSVYF           +   GY + +   ++EE+P
Sbjct: 61  TENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKTP----NIEPQGYSEEEE-EEEEEVP 120

Query: 121 LASAQN--GKPSSK--DVKPGLVESNNAKNKDEDDVSEDDESDDDEDSDDESDEEMLEGD 180
             +A     KP +K  +VKP +           DD  E+DESD D   +D+SD E     
Sbjct: 121 AGNAAKAVAKPKAKPAEVKPAV-----------DD--EEDESDSDGMDEDDSDGE----- 180

Query: 181 SGDSDEEDDDSESDEETPKKVESAKKRLNESATKTTPLPAKKAKLA-TPEKTD-SKKGGH 240
                    DSE +E TPKK  S+KKR NE+  K  P+ AKKAK+A TP+KTD  KKGG 
Sbjct: 181 ---------DSEEEEPTPKKPASSKKRANETTPK-APVSAKKAKVAVTPQKTDEKKKGGK 212

[Close]

BLAST of IVF0025338 vs. TAIR 10
Match: AT3G44750.2 (histone deacetylase 3 )

HSP 1 Score: 125.2 bits (313), Expect = 8.9e-29
Identity = 110/246 (44.72%), Postives = 140/246 (56.91%), Query Frame = 0


Query: 1   MEFWGVEVKAGQSLIVKPGNEKLIHLSQATLGEIKKDKASENVTIFLKIGDQKLVLGILS 60
           MEFWG+EVK+G+ + V P    LIH+SQA+LGE  K+K  E V + +K+G+Q LVLG LS
Sbjct: 1   MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGEC-KNKKGEFVPLHVKVGNQNLVLGTLS 60

Query: 61  AEKFPQLSFDLVFEKEFELSHNGKSGSVYFTLVSLTCSLFLLATDGYLDSDAGSDDEELP 120
            E  PQL  DLVF+KEFELSH    GSVYF           +   GY +     ++EE+P
Sbjct: 61  TENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKTP----NIEPQGYSE----EEEEEVP 120

Query: 121 LASAQN--GKPSSK--DVKPGLVESNNAKNKDEDDVSEDDESDDDEDSDDESDEEMLEGD 180
             +A     KP +K  +VKP +           DD  E+DESD D   +D+SD E     
Sbjct: 121 AGNAAKAVAKPKAKPAEVKPAV-----------DD--EEDESDSDGMDEDDSDGE----- 180

Query: 181 SGDSDEEDDDSESDEETPKKVESAKKRLNESATKTTPLPAKKAKLA-TPEKTD-SKKGGH 240
                    DSE +E TPKK  S+KKR NE+  K  P+ AKKAK+A TP+KTD  KKGG 
Sbjct: 181 ---------DSEEEEPTPKKPASSKKRANETTPK-APVSAKKAKVAVTPQKTDEKKKGGK 209

The following BLAST results are available for this feature:

BLAST of IVF0025338 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6V9I6	2.5e-44	49.80	Histone deacetylase HDT1 OS=Solanum chacoense OX=4108 GN=HDT1 PE=2 SV=1	[more]
Q8LJS2	2.5e-44	48.59	Histone deacetylase HDT1 OS=Glycine max OX=3847 GN=HDT1 PE=2 SV=1	[more]
Q9M4U4	7.8e-38	47.35	Histone deacetylase HDT3 OS=Zea mays OX=4577 GN=HDT3 PE=2 SV=1	[more]
O24591	6.6e-37	43.49	Histone deacetylase HDT1 OS=Zea mays OX=4577 GN=HDT1 PE=1 SV=1	[more]
Q9M4U5	2.1e-35	46.49	Histone deacetylase HDT2 OS=Zea mays OX=4577 GN=HDT2 PE=1 SV=1	[more]

BLAST of IVF0025338 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C9I8	5.5e-111	85.26	histone deacetylase HDT1-like OS=Cucumis melo OX=3656 GN=LOC103497976 PE=3 SV=1	[more]
A0A0A0KB05	2.6e-105	82.62	Histone deacetylase 2a OS=Cucumis sativus OX=3659 GN=Csa_6G150540 PE=3 SV=1	[more]
A0A6J1FU30	6.6e-88	71.23	histone deacetylase HDT1-like OS=Cucurbita moschata OX=3662 GN=LOC111448146 PE=3...	[more]
A0A6J1JAV1	9.5e-87	69.66	histone deacetylase HDT1-like OS=Cucurbita maxima OX=3661 GN=LOC111484116 PE=3 S...	[more]
A0A5A7SSE8	1.6e-81	66.44	Histone deacetylase HDT1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]

BLAST of IVF0025338 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458629.1	1.85e-141	85.26	PREDICTED: histone deacetylase HDT1-like [Cucumis melo]	[more]
XP_011657054.1	1.43e-126	78.32	histone deacetylase HDT1 isoform X1 [Cucumis sativus]	[more]
XP_004145780.1	5.58e-126	78.25	histone deacetylase HDT1 isoform X2 [Cucumis sativus]	[more]
KAE8646904.1	2.73e-119	76.43	hypothetical protein Csa_020859 [Cucumis sativus]	[more]
XP_022943359.1	3.85e-111	70.34	histone deacetylase HDT1-like [Cucurbita moschata]	[more]

BLAST of IVF0025338 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22650.2	1.1e-34	42.24	histone deacetylase 2B	[more]
AT5G22650.1	2.7e-33	42.09	histone deacetylase 2B	[more]
AT5G03740.1	5.0e-32	40.91	histone deacetylase 2C	[more]
AT3G44750.1	4.0e-29	44.72	histone deacetylase 3	[more]
AT3G44750.2	8.9e-29	44.72	histone deacetylase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041232	Nucleoplasmin-like domain	PFAM	PF17800	NPL	coord: 3..90 e-value: 3.6E-10 score: 40.5
None	No IPR available	GENE3D	2.60.120.340	Nucleoplasmin core domain	coord: 1..95 e-value: 3.4E-13 score: 51.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..250
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..191
None	No IPR available	PANTHER	PTHR31802	32 KDA HEAT SHOCK PROTEIN-RELATED	coord: 1..270
None	No IPR available	PANTHER	PTHR31802:SF12	HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1	coord: 1..270

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0025338.1	IVF0025338.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005730	nucleolus