IVF0025305 (gene) Melon (IVF77) v1

Overview


Name	IVF0025305
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Ribosomal RNA small subunit methyltransferase G
Location	chr02: 11818808 .. 11820485 (-)
RNA-Seq Expression	IVF0025305
Synteny	IVF0025305

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGATGAAAGGGGTTGTCTCTCAATACCCTGTTTACGAGGATTCCAAGACTAGATTCAAGCATCAGAGTCTCCTCCAAGATTATCATGACTTGGAGAAGGTAAAATTTCTTTTTCAGTTTTCATGGATTTGGGTTTTCTTTGTTGTTTCTATCAGATCTGGCTTCTTTTCATCATGTTTGTATATTTTCTTCAAATCTTTTCTTCTTCTAAATTGGAGTTTCTGATATTTGGGTTCTTTTGCTTAATAGAATTTCTGGTTTGGAAGAGGGGAAAGATCGTATGATTAGTTTGTTATTTTTTTGGGTTAAGATCATTTTGGGTTGCTCAGACATAATTTGTGGATTGCTTATTGAAATTTGAAATACTCATCTCTAGGCAAAAAGGAGGAAAGTTCATATATTAAAGTGCTTTTCTATTTGTTTATTTTCTTGCTTCTGAAAGATCCATAACCCTTTTGAACTTATATGATCTCCTCTTGTGGTGTTATCATTAAGTAATTTTCTACCAAGCAACTTTGGTTCATTCTTAGCCTGTGCTTAATTACCATTTTAGATCATCTTTTTGAGTCCTACGGTTTTCTCTTCTACTCTCTTAATATATTTTCTTAAGCAACTTATCTTATTTGTATGGTCTTCTGTTTTGTTTCTGCTTCACCTAAGTTTGAGACTTTGAAGGTCCGTAGGAATTTTGATTCGGTTGTGAATGAAATTTGTCATTCCAAGCTCTGCGTTTGTGACATGAAGATCAGTTTAGGAGTAAGGAAAGTTATGGAGGAACAAACAATTGAAAGTTTTTTTCTCCTTCCAGGAAACAGGAACTGTCAAGAGGAAATTACAAATGATGAAGCAAAAAAAGATGACCCTAATAGCAGAAGTCAGGTATAATTTTCATATTATTACTTTCTATTTGTATTGATCTTCTCAAGGAGTTGGTGAATTGTTTAGAACTAACTAAAAGTCTGTTTATTTTGAAGATTCTTAAGGAAGAGATATGAGTACTTGATGAAGAACCAACCATCAACAAAAGACCATTATTCAAATGGAGAGACAGTGCAGCAGAAGCAATCGAAAAATCAAGTGGCTAACAATAATAAGAAGGTGAAGAATGGTGGTAGAAGAAGAACTGCTTTGCAACCGCTCCCGACCATCTCAGATATAAACCAAAAGGAAAGAATCGATATGCCTATGCAGAATTCTACTCCAATTCCTGTTCTTGACTTAAACCAGAAGGCAAAGACTTCTTCTAGGAAGAAAGCCAATCAACATAACTCGATCCCGGTTTTCGACTTGAACCAGAAGGAAAGAATGTGCAGTGGGAGAGATGCTAGCGAGAGAAACATCACTCCATTTTTTGACTTGAACCAAATTTCGGTAACTGACTAGGGACTTATGATAGCTACACTCTACAAATGTAATTTTTCACTACAATGTTGTCCACCTCCCTTTCCTAACAATCTCTATATTTATTTTGGTTCAGATAGAGGAAGAGGAATTGCAGACCCATTACGAGCCGCTGAGAGTTGATGAGCTGAAGAAAAGCCTTCTTCGAGGAGGGAACGATGAGCAGCAAAACGATATCAAGATTTCGGCATGCAGGAGTATTGGAGATGGTCCAAGTCGAGCTGGTAAAAGAAAAATTTCATGGCAAGATCAGGTAGCTTTAAGGGTTTGA

mRNA sequence

ATGAAGAAGATGAAAGGGGTTGTCTCTCAATACCCTGTTTACGAGGATTCCAAGACTAGATTCAAGCATCAGAGTCTCCTCCAAGATTATCATGACTTGGAGAAGGAAACAGGAACTGTCAAGAGGAAATTACAAATGATGAAGCAAAAAAAGATGACCCTAATAGCAGAAGTCAGATTCTTAAGGAAGAGATATGAGTACTTGATGAAGAACCAACCATCAACAAAAGACCATTATTCAAATGGAGAGACAGTGCAGCAGAAGCAATCGAAAAATCAAGTGGCTAACAATAATAAGAAGGTGAAGAATGGTGGTAGAAGAAGAACTGCTTTGCAACCGCTCCCGACCATCTCAGATATAAACCAAAAGGAAAGAATCGATATGCCTATGCAGAATTCTACTCCAATTCCTGTTCTTGACTTAAACCAGAAGGCAAAGACTTCTTCTAGGAAGAAAGCCAATCAACATAACTCGATCCCGGTTTTCGACTTGAACCAGAAGGAAAGAATGTGCAGTGGGAGAGATGCTAGCGAGAGAAACATCACTCCATTTTTTGACTTGAACCAAATTTCGATAGAGGAAGAGGAATTGCAGACCCATTACGAGCCGCTGAGAGTTGATGAGCTGAAGAAAAGCCTTCTTCGAGGAGGGAACGATGAGCAGCAAAACGATATCAAGATTTCGGCATGCAGGAGTATTGGAGATGGTCCAAGTCGAGCTGGTAAAAGAAAAATTTCATGGCAAGATCAGGTAGCTTTAAGGGTTTGA

Coding sequence (CDS)

ATGAAGAAGATGAAAGGGGTTGTCTCTCAATACCCTGTTTACGAGGATTCCAAGACTAGATTCAAGCATCAGAGTCTCCTCCAAGATTATCATGACTTGGAGAAGGAAACAGGAACTGTCAAGAGGAAATTACAAATGATGAAGCAAAAAAAGATGACCCTAATAGCAGAAGTCAGATTCTTAAGGAAGAGATATGAGTACTTGATGAAGAACCAACCATCAACAAAAGACCATTATTCAAATGGAGAGACAGTGCAGCAGAAGCAATCGAAAAATCAAGTGGCTAACAATAATAAGAAGGTGAAGAATGGTGGTAGAAGAAGAACTGCTTTGCAACCGCTCCCGACCATCTCAGATATAAACCAAAAGGAAAGAATCGATATGCCTATGCAGAATTCTACTCCAATTCCTGTTCTTGACTTAAACCAGAAGGCAAAGACTTCTTCTAGGAAGAAAGCCAATCAACATAACTCGATCCCGGTTTTCGACTTGAACCAGAAGGAAAGAATGTGCAGTGGGAGAGATGCTAGCGAGAGAAACATCACTCCATTTTTTGACTTGAACCAAATTTCGATAGAGGAAGAGGAATTGCAGACCCATTACGAGCCGCTGAGAGTTGATGAGCTGAAGAAAAGCCTTCTTCGAGGAGGGAACGATGAGCAGCAAAACGATATCAAGATTTCGGCATGCAGGAGTATTGGAGATGGTCCAAGTCGAGCTGGTAAAAGAAAAATTTCATGGCAAGATCAGGTAGCTTTAAGGGTTTGA

Protein sequence

MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLIAEVRFLRKRYEYLMKNQPSTKDHYSNGETVQQKQSKNQVANNNKKVKNGGRRRTALQPLPTISDINQKERIDMPMQNSTPIPVLDLNQKAKTSSRKKANQHNSIPVFDLNQKERMCSGRDASERNITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGDGPSRAGKRKISWQDQVALRV

Homology

[Close]

BLAST of IVF0025305 vs. ExPASy TrEMBL
Match: A0A5A7T0V7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00530 PE=4 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 1.1e-136
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0


Query: 1   MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLIAEVRF 60
           MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLIAEVRF
Sbjct: 1   MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLIAEVRF 60

Query: 61  LRKRYEYLMKNQPSTKDHYSNGETVQQKQSKNQVANNNKKVKNGGRRRTALQPLPTISDI 120
           LRKRYEYLMKNQPSTKDHYSNGETVQQKQSKNQVANNNKKVKNGGRRRTALQPLPTISDI
Sbjct: 61  LRKRYEYLMKNQPSTKDHYSNGETVQQKQSKNQVANNNKKVKNGGRRRTALQPLPTISDI 120

Query: 121 NQKERIDMPMQNSTPIPVLDLNQKAKTSSRKKANQHNSIPVFDLNQKERMCSGRDASERN 180
           NQKERIDMPMQNSTPIPVLDLNQKAKTSSRKKANQHNSIPVFDLNQKERMCSGRDASERN
Sbjct: 121 NQKERIDMPMQNSTPIPVLDLNQKAKTSSRKKANQHNSIPVFDLNQKERMCSGRDASERN 180

Query: 181 ITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGDGPSRA 240
           ITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGDGPSRA
Sbjct: 181 ITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGDGPSRA 240

Query: 241 GKRKISWQDQVALRV 256
           GKRKISWQDQVALRV
Sbjct: 241 GKRKISWQDQVALRV 255

[Close]

BLAST of IVF0025305 vs. ExPASy TrEMBL
Match: A0A1S3B8I5 (uncharacterized protein LOC103487344 OS=Cucumis melo OX=3656 GN=LOC103487344 PE=4 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 1.1e-136
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0


Query: 1   MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLIAEVRF 60
           MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLIAEVRF
Sbjct: 1   MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLIAEVRF 60

Query: 61  LRKRYEYLMKNQPSTKDHYSNGETVQQKQSKNQVANNNKKVKNGGRRRTALQPLPTISDI 120
           LRKRYEYLMKNQPSTKDHYSNGETVQQKQSKNQVANNNKKVKNGGRRRTALQPLPTISDI
Sbjct: 61  LRKRYEYLMKNQPSTKDHYSNGETVQQKQSKNQVANNNKKVKNGGRRRTALQPLPTISDI 120

Query: 121 NQKERIDMPMQNSTPIPVLDLNQKAKTSSRKKANQHNSIPVFDLNQKERMCSGRDASERN 180
           NQKERIDMPMQNSTPIPVLDLNQKAKTSSRKKANQHNSIPVFDLNQKERMCSGRDASERN
Sbjct: 121 NQKERIDMPMQNSTPIPVLDLNQKAKTSSRKKANQHNSIPVFDLNQKERMCSGRDASERN 180

Query: 181 ITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGDGPSRA 240
           ITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGDGPSRA
Sbjct: 181 ITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGDGPSRA 240

Query: 241 GKRKISWQDQVALRV 256
           GKRKISWQDQVALRV
Sbjct: 241 GKRKISWQDQVALRV 255

[Close]

BLAST of IVF0025305 vs. ExPASy TrEMBL
Match: A0A0A0LW13 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G256780 PE=4 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 1.1e-131
Identity = 247/255 (96.86%), Postives = 251/255 (98.43%), Query Frame = 0


Query: 1   MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLIAEVRF 60
           MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTL+AEVRF
Sbjct: 1   MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAEVRF 60

Query: 61  LRKRYEYLMKNQPSTKDHYSNGETVQQKQSKNQVANNNKKVKNGGRRRTALQPLPTISDI 120
           LRKRYEYLMKNQPSTKDHYSN ETVQQKQ KNQVANNNKK KNGGRRRTAL+PLPTISDI
Sbjct: 61  LRKRYEYLMKNQPSTKDHYSNVETVQQKQWKNQVANNNKKGKNGGRRRTALKPLPTISDI 120

Query: 121 NQKERIDMPMQNSTPIPVLDLNQKAKTSSRKKANQHNSIPVFDLNQKERMCSGRDASERN 180
           NQKERIDMP+QNSTPIPVLDLNQKAKTSSRKKA+QHNS PVFDLNQKERMCSGRDASERN
Sbjct: 121 NQKERIDMPLQNSTPIPVLDLNQKAKTSSRKKASQHNSTPVFDLNQKERMCSGRDASERN 180

Query: 181 ITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGDGPSRA 240
           ITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGDGPSRA
Sbjct: 181 ITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGDGPSRA 240

Query: 241 GKRKISWQDQVALRV 256
           GKRKISWQDQVALRV
Sbjct: 241 GKRKISWQDQVALRV 255

[Close]

BLAST of IVF0025305 vs. ExPASy TrEMBL
Match: A0A6J1EVU7 (uncharacterized protein LOC111438466 OS=Cucurbita moschata OX=3662 GN=LOC111438466 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 8.7e-105
Identity = 212/260 (81.54%), Postives = 227/260 (87.31%), Query Frame = 0


Query: 1   MKKMKGVVSQYP-VYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLIAEVR 60
           MKKMKG  SQ+P V++DSK RFKHQ+LLQDYH+LEKET T KRKLQMMKQKKMTL+AEVR
Sbjct: 1   MKKMKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVR 60

Query: 61  FLRKRYEYLMKNQPSTKDHYSNGETVQQKQSKNQVANNNKKVKNGGRRRTALQPLPTISD 120
           FL+KRYEYLMKNQ    + +SNG  VQQKQ   QVANN KK KNG RRR ALQPLPTISD
Sbjct: 61  FLKKRYEYLMKNQ--LPNDHSNGNPVQQKQLNKQVANNTKKGKNGSRRRPALQPLPTISD 120

Query: 121 INQKE----RIDMPMQNSTPIPVLDLNQKAKTSSRKKANQHNSIPVFDLNQKERMCSGRD 180
           INQKE    RID+P Q+STPIPVLDLNQKAKT  RKKANQ NS PVFDLNQKERM SGRD
Sbjct: 121 INQKERINRRIDIPPQSSTPIPVLDLNQKAKT--RKKANQQNSTPVFDLNQKERMYSGRD 180

Query: 181 ASERNITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGD 240
           ASER ITPFFDLNQIS+EEEELQTHY+ LR DELKKSLLRGGNDEQQNDIKISACR++GD
Sbjct: 181 ASERTITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVGD 240

Query: 241 GPSRAGKRKISWQDQVALRV 256
           GPSRAGKRKISWQDQVALRV
Sbjct: 241 GPSRAGKRKISWQDQVALRV 256

[Close]

BLAST of IVF0025305 vs. ExPASy TrEMBL
Match: A0A6J1HJN9 (uncharacterized protein LOC111465117 OS=Cucurbita maxima OX=3661 GN=LOC111465117 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 4.8e-103
Identity = 211/260 (81.15%), Postives = 226/260 (86.92%), Query Frame = 0


Query: 1   MKKMKGVVSQYP-VYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLIAEVR 60
           MKKMKG  SQ+P V++DSK RFKHQ+LLQDYH+LEKET T KRKLQMMKQKKMTL+AEVR
Sbjct: 1   MKKMKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVR 60

Query: 61  FLRKRYEYLMKNQPSTKDHYSNGETVQQKQSKNQVANNNKKVKNGGRRRTALQPLPTISD 120
           FLRKRYEYLMKNQ    + +SNG  VQQK    QVANN KK KNG RRR ALQPLPTISD
Sbjct: 61  FLRKRYEYLMKNQ--LPNDHSNGNPVQQKH--KQVANNTKKGKNGSRRRPALQPLPTISD 120

Query: 121 INQKE----RIDMPMQNSTPIPVLDLNQKAKTSSRKKANQHNSIPVFDLNQKERMCSGRD 180
           INQKE    RID+P Q+STPIPVLDLNQKAKT  RKKANQ NS PVFDLNQKERM SGRD
Sbjct: 121 INQKERINRRIDIPPQSSTPIPVLDLNQKAKT--RKKANQQNSTPVFDLNQKERMYSGRD 180

Query: 181 ASERNITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGD 240
           ASER ITPFFDLNQIS+EEEELQTHY+ LR DELKKSLLRGGNDEQQNDIKISACR++G+
Sbjct: 181 ASERTITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVGE 240

Query: 241 GPSRAGKRKISWQDQVALRV 256
           GPSRAGKRKISWQDQVALRV
Sbjct: 241 GPSRAGKRKISWQDQVALRV 254

[Close]

BLAST of IVF0025305 vs. NCBI nr
Match: XP_008443848.1 (PREDICTED: uncharacterized protein LOC103487344 [Cucumis melo] >KAA0035095.1 uncharacterized protein E6C27_scaffold57G001700 [Cucumis melo var. makuwa] >TYJ95983.1 uncharacterized protein E5676_scaffold271G00530 [Cucumis melo var. makuwa])

HSP 1 Score: 495 bits (1275), Expect = 1.94e-176
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0


Query: 1   MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLIAEVRF 60
           MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLIAEVRF
Sbjct: 1   MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLIAEVRF 60

Query: 61  LRKRYEYLMKNQPSTKDHYSNGETVQQKQSKNQVANNNKKVKNGGRRRTALQPLPTISDI 120
           LRKRYEYLMKNQPSTKDHYSNGETVQQKQSKNQVANNNKKVKNGGRRRTALQPLPTISDI
Sbjct: 61  LRKRYEYLMKNQPSTKDHYSNGETVQQKQSKNQVANNNKKVKNGGRRRTALQPLPTISDI 120

Query: 121 NQKERIDMPMQNSTPIPVLDLNQKAKTSSRKKANQHNSIPVFDLNQKERMCSGRDASERN 180
           NQKERIDMPMQNSTPIPVLDLNQKAKTSSRKKANQHNSIPVFDLNQKERMCSGRDASERN
Sbjct: 121 NQKERIDMPMQNSTPIPVLDLNQKAKTSSRKKANQHNSIPVFDLNQKERMCSGRDASERN 180

Query: 181 ITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGDGPSRA 240
           ITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGDGPSRA
Sbjct: 181 ITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGDGPSRA 240

Query: 241 GKRKISWQDQVALRV 255
           GKRKISWQDQVALRV
Sbjct: 241 GKRKISWQDQVALRV 255

[Close]

BLAST of IVF0025305 vs. NCBI nr
Match: KGN65169.1 (hypothetical protein Csa_019695 [Cucumis sativus])

HSP 1 Score: 479 bits (1232), Expect = 6.97e-170
Identity = 247/255 (96.86%), Postives = 251/255 (98.43%), Query Frame = 0


Query: 1   MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLIAEVRF 60
           MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTL+AEVRF
Sbjct: 1   MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAEVRF 60

Query: 61  LRKRYEYLMKNQPSTKDHYSNGETVQQKQSKNQVANNNKKVKNGGRRRTALQPLPTISDI 120
           LRKRYEYLMKNQPSTKDHYSN ETVQQKQ KNQVANNNKK KNGGRRRTAL+PLPTISDI
Sbjct: 61  LRKRYEYLMKNQPSTKDHYSNVETVQQKQWKNQVANNNKKGKNGGRRRTALKPLPTISDI 120

Query: 121 NQKERIDMPMQNSTPIPVLDLNQKAKTSSRKKANQHNSIPVFDLNQKERMCSGRDASERN 180
           NQKERIDMP+QNSTPIPVLDLNQKAKTSSRKKA+QHNS PVFDLNQKERMCSGRDASERN
Sbjct: 121 NQKERIDMPLQNSTPIPVLDLNQKAKTSSRKKASQHNSTPVFDLNQKERMCSGRDASERN 180

Query: 181 ITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGDGPSRA 240
           ITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGDGPSRA
Sbjct: 181 ITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGDGPSRA 240

Query: 241 GKRKISWQDQVALRV 255
           GKRKISWQDQVALRV
Sbjct: 241 GKRKISWQDQVALRV 255

[Close]

BLAST of IVF0025305 vs. NCBI nr
Match: XP_031742294.1 (uncharacterized protein LOC101209712 [Cucumis sativus])

HSP 1 Score: 479 bits (1232), Expect = 5.89e-167
Identity = 247/255 (96.86%), Postives = 251/255 (98.43%), Query Frame = 0


Query: 1   MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLIAEVRF 60
           MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTL+AEVRF
Sbjct: 1   MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAEVRF 60

Query: 61  LRKRYEYLMKNQPSTKDHYSNGETVQQKQSKNQVANNNKKVKNGGRRRTALQPLPTISDI 120
           LRKRYEYLMKNQPSTKDHYSN ETVQQKQ KNQVANNNKK KNGGRRRTAL+PLPTISDI
Sbjct: 61  LRKRYEYLMKNQPSTKDHYSNVETVQQKQWKNQVANNNKKGKNGGRRRTALKPLPTISDI 120

Query: 121 NQKERIDMPMQNSTPIPVLDLNQKAKTSSRKKANQHNSIPVFDLNQKERMCSGRDASERN 180
           NQKERIDMP+QNSTPIPVLDLNQKAKTSSRKKA+QHNS PVFDLNQKERMCSGRDASERN
Sbjct: 121 NQKERIDMPLQNSTPIPVLDLNQKAKTSSRKKASQHNSTPVFDLNQKERMCSGRDASERN 180

Query: 181 ITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGDGPSRA 240
           ITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGDGPSRA
Sbjct: 181 ITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGDGPSRA 240

Query: 241 GKRKISWQDQVALRV 255
           GKRKISWQDQVALRV
Sbjct: 241 GKRKISWQDQVALRV 255

[Close]

BLAST of IVF0025305 vs. NCBI nr
Match: XP_038879755.1 (uncharacterized protein LOC120071506 isoform X2 [Benincasa hispida])

HSP 1 Score: 447 bits (1149), Expect = 3.60e-157
Identity = 237/259 (91.51%), Postives = 241/259 (93.05%), Query Frame = 0


Query: 1   MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLIAEVRF 60
           MKKMKGVVSQYPV+EDSKTRFKHQSLLQDY DLEKETGTVKRKLQMMK KKMTLIAEVRF
Sbjct: 1   MKKMKGVVSQYPVFEDSKTRFKHQSLLQDYQDLEKETGTVKRKLQMMKLKKMTLIAEVRF 60

Query: 61  LRKRYEYLMKNQPSTKDHYSNGETVQQKQSKNQVANNNKKVKNGGRRRTALQPLPTISDI 120
           LRKRYEYLMKNQ ST DHYSN E VQQKQ  NQVANNNKK KNG RRRT LQPLPTISD+
Sbjct: 61  LRKRYEYLMKNQLSTNDHYSNREPVQQKQLNNQVANNNKKGKNGARRRTVLQPLPTISDV 120

Query: 121 NQKERID----MPMQNSTPIPVLDLNQKAKTSSRKKANQHNSIPVFDLNQKERMCSGRDA 180
           NQKERID    MP+QNSTPIPVLDLNQKAKTSSRKKANQ NS PVFDLNQKERM SGRDA
Sbjct: 121 NQKERIDKGIDMPLQNSTPIPVLDLNQKAKTSSRKKANQQNSTPVFDLNQKERMYSGRDA 180

Query: 181 SERNITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGDG 240
           SERNITPFFDLNQISIEEEELQT+YEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGDG
Sbjct: 181 SERNITPFFDLNQISIEEEELQTNYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGDG 240

Query: 241 PSRAGKRKISWQDQVALRV 255
           PSRAGKRKISWQDQVALRV
Sbjct: 241 PSRAGKRKISWQDQVALRV 259

[Close]

BLAST of IVF0025305 vs. NCBI nr
Match: XP_038879754.1 (uncharacterized protein LOC120071506 isoform X1 [Benincasa hispida])

HSP 1 Score: 440 bits (1131), Expect = 2.56e-154
Identity = 237/266 (89.10%), Postives = 241/266 (90.60%), Query Frame = 0


Query: 1   MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEK-------ETGTVKRKLQMMKQKKMT 60
           MKKMKGVVSQYPV+EDSKTRFKHQSLLQDY DLEK       ETGTVKRKLQMMK KKMT
Sbjct: 1   MKKMKGVVSQYPVFEDSKTRFKHQSLLQDYQDLEKLIFFSFQETGTVKRKLQMMKLKKMT 60

Query: 61  LIAEVRFLRKRYEYLMKNQPSTKDHYSNGETVQQKQSKNQVANNNKKVKNGGRRRTALQP 120
           LIAEVRFLRKRYEYLMKNQ ST DHYSN E VQQKQ  NQVANNNKK KNG RRRT LQP
Sbjct: 61  LIAEVRFLRKRYEYLMKNQLSTNDHYSNREPVQQKQLNNQVANNNKKGKNGARRRTVLQP 120

Query: 121 LPTISDINQKERID----MPMQNSTPIPVLDLNQKAKTSSRKKANQHNSIPVFDLNQKER 180
           LPTISD+NQKERID    MP+QNSTPIPVLDLNQKAKTSSRKKANQ NS PVFDLNQKER
Sbjct: 121 LPTISDVNQKERIDKGIDMPLQNSTPIPVLDLNQKAKTSSRKKANQQNSTPVFDLNQKER 180

Query: 181 MCSGRDASERNITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISA 240
           M SGRDASERNITPFFDLNQISIEEEELQT+YEPLRVDELKKSLLRGGNDEQQNDIKISA
Sbjct: 181 MYSGRDASERNITPFFDLNQISIEEEELQTNYEPLRVDELKKSLLRGGNDEQQNDIKISA 240

Query: 241 CRSIGDGPSRAGKRKISWQDQVALRV 255
           CRSIGDGPSRAGKRKISWQDQVALRV
Sbjct: 241 CRSIGDGPSRAGKRKISWQDQVALRV 266

[Close]

BLAST of IVF0025305 vs. TAIR 10
Match: AT5G57910.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 105.9 bits (263), Expect = 4.8e-23
Identity = 87/249 (34.94%), Postives = 129/249 (51.81%), Query Frame = 0


Query: 14  YEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLIAEVRFLRKRYEYLMKNQP 73
           +ED K RF+H SL+QDY +L  ET  ++++LQ ++++K TL+AEVRFLR+RY +L ++QP
Sbjct: 16  FEDPKVRFRHHSLMQDYGELHMETEAMRKRLQAVRERKATLMAEVRFLRRRYRHLRQDQP 75

Query: 74  STKDHYSNGETVQQKQSKNQVANNNKKVKNGGRRRTALQPLPTISDINQKERIDMPMQNS 133
                        Q+  K + +N  KK+                       R+++   N 
Sbjct: 76  -------------QEIKKVRRSNGGKKI-----------------------RVEVSPSNK 135

Query: 134 TPIPVLDLNQKAKTSSRKKANQHNSIPVFDLNQKERMCSGRDASERNITPFFDLNQISIE 193
           +         +A+T       +H S+P  DLN  E+       S +   P FDLNQIS E
Sbjct: 136 S---------EAET-------KHVSLP--DLNHSEKAHDETKTSPKRRVPLFDLNQISGE 195

Query: 194 EEE----LQTHYEPLRVDELK--KSLLRGGNDEQQNDIKISACRSIGDGPSRAGKRKISW 253
           EE+    +  + E  RV+E    K L+    + QQ D+K S+CR+ G+G   + KRKISW
Sbjct: 196 EEQETEAVDNNQENTRVEESNSCKRLMISSIEMQQKDVKPSSCRNGGNG---SNKRKISW 207

Query: 254 QDQV-ALRV 256
           QD V ALRV
Sbjct: 256 QDPVAALRV 207

[Close]

BLAST of IVF0025305 vs. TAIR 10
Match: AT4G30630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57910.1); Has 33 Blast hits to 33 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 81.3 bits (199), Expect = 1.3e-15
Identity = 78/233 (33.48%), Postives = 120/233 (51.50%), Query Frame = 0


Query: 32  DLEKETGTVKRKLQMMKQKKMTLIAEVRFLRKRYEYLMKNQ------PSTKDHYSNGETV 91
           +LEKE    +++L+M+KQK++TL +EVRFLR+RYE+L ++Q         +   S G  V
Sbjct: 26  ELEKELEIKRKRLEMIKQKRLTLKSEVRFLRRRYEHLKQDQTLETSPEMLRLSESGGLEV 85

Query: 92  QQKQSKNQVANNNKKVKNGGRRRTALQPLPTISDI-NQKERIDMPMQNSTPIPVLDLNQK 151
            +K S        +K ++G R       L   + I N+KE +      +  +   DL++K
Sbjct: 86  PRKPS------GERKKQSGVRASVPCFDLKLKNTICNEKEAL------ANNVASCDLDKK 145

Query: 152 AKTSSRKKANQHNSIPVF--DLNQKERMCSGRDASERNITPFFDLNQISIEEEELQTHYE 211
            K   R + +   + PV   DLN  E   SG D       P FDLNQIS EEEE + + E
Sbjct: 146 RK---RSRGSDVLTFPVSLPDLN-GEGNTSGTDK-----VPGFDLNQISREEEEPEVNGE 205

Query: 212 PLRVDELKKSLLRGGNDEQQNDIKISACRSIGDGPSRAGKRKISWQDQVALRV 256
            +  + +K ++L     +   + K+  C  +    +RA KRK++WQD VAL V
Sbjct: 206 HMVAEAMKNAMLDNRISDLHVERKLPICGDVEKELNRAVKRKVTWQDPVALSV 237

The following BLAST results are available for this feature:

BLAST of IVF0025305 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0025305 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T0V7	1.1e-136	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B8I5	1.1e-136	100.00	uncharacterized protein LOC103487344 OS=Cucumis melo OX=3656 GN=LOC103487344 PE=...	[more]
A0A0A0LW13	1.1e-131	96.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G256780 PE=4 SV=1	[more]
A0A6J1EVU7	8.7e-105	81.54	uncharacterized protein LOC111438466 OS=Cucurbita moschata OX=3662 GN=LOC1114384...	[more]
A0A6J1HJN9	4.8e-103	81.15	uncharacterized protein LOC111465117 OS=Cucurbita maxima OX=3661 GN=LOC111465117...	[more]

BLAST of IVF0025305 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443848.1	1.94e-176	100.00	PREDICTED: uncharacterized protein LOC103487344 [Cucumis melo] >KAA0035095.1 unc...	[more]
KGN65169.1	6.97e-170	96.86	hypothetical protein Csa_019695 [Cucumis sativus]	[more]
XP_031742294.1	5.89e-167	96.86	uncharacterized protein LOC101209712 [Cucumis sativus]	[more]
XP_038879755.1	3.60e-157	91.51	uncharacterized protein LOC120071506 isoform X2 [Benincasa hispida]	[more]
XP_038879754.1	2.56e-154	89.10	uncharacterized protein LOC120071506 isoform X1 [Benincasa hispida]	[more]

BLAST of IVF0025305 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57910.1	4.8e-23	34.94	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G30630.1	1.3e-15	33.48	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..100
None	No IPR available	PANTHER	PTHR34807:SF3	OS08G0270800 PROTEIN	coord: 1..255
None	No IPR available	PANTHER	PTHR34807	OS08G0270800 PROTEIN	coord: 1..255

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0025305.2	IVF0025305.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane