IVF0025304 (gene) Melon (IVF77) v1

Overview


Name	IVF0025304
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	50S ribosomal protein L13
Location	chr08: 3086136 .. 3090339 (-)
RNA-Seq Expression	IVF0025304
Synteny	IVF0025304

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATTATTAAAATTTTCTCATAGAAGAAGCTCTATGGTCTAAACCCTCCCTCCCATTTTCAGCCACTGCACACTGCCGCCCCTCTTGCCCGACACCGCCTTAGCAACTGCCGCCGCACACTGCACTCTCAGCTGCCGCAGCTTTGCTCTTCCGACGAGCTCGCCGCTGCTCCTTCCTTCTCACGCTCTTTCGTCTCTCCGAGCAATCGGAGTTACTTATCTCTATATTTCTCTCTCAGAAACACAGAGGTTCAGCCCCTCCACGCCGTTGGTGAGATCGCGCCGCCTTCGGTTATTGTTCAGATCCCAAAGGTTTTTGATTTTTTTTTGATTTTGGTTGATTATCTTCACCCACAGAGAAGAAAATCAAGGTTTTTTGTTTCTAAATTTTTTATCAACCCCCAGTCTAAATGATAATATAAAATTGAGAATGTATACATCACAGGCTAAGGGGGGAAAAGGAAGCGTATTAATCTTATATAAATCAGTTTAAAAAAAGAAAAAAACTTGTTGGAACTGAAAATTTGCTCTCTGTGGGTGAAGAAATTTGTATTTGAAAATATTGATTCTGTTGTTAAGGGAAAATTATTTTGATGTTAATTGTTATCAGTTGAGTGTACTGATAAATATCTTGTTATGATGCGGAACAGCGAGAAGCTAGGACATTGATAATGGCAAGCCAAGCAGCTAGTTCTATCAATGGCAACATGAAGGCAAGCCTTCTGTACTTTTACACTAATACATATTAATCATCTGAAATGGTTGTGGAATGCATATTGGACATTTAAGTTGTGCTTTTGATTAGGCGTGTTCTTTGTCAGTTGGTTTTAAAAATGATAGTGTCTACTCTATCAGCTCTTGTTACACAATCTCATGCTAGAGTTTGGGGAAATGTTTTATGCTACAGTTGGGGAACTGTTTGCTTGGAAACTCTGGTGGACCCGTTTCTGAACTTTATTTGATAAGAAACATTGAATTAATAAAGAAGAACAATATTTGTATTCTAGGTTTGATTAGGGTTTACGTTCTGAACATTTAGTATTTGTCCATGCAATTTATTATAATTGGACTGCATGCTTTTAAATTTAAAGTAAACTACCTTCCGTAGTTTACGTTCTGAACATTTAGAAATTGTCGTATCGTGTTTATTGTTACGTTTTATTCAGGTTATTATGGTGTCTTTATAGGGTAAGGTGGTTAGATTTCCTTATGTCAGATCATTCTTAGTGTTATAGACTTCGAACATGCCTTCCGTGGTGTTTTAAGTTAGCCATTAAATGATATTTTCTCTATGTACTGTTTGAAAATTAAGCTATCTTATGAATTTCGGTTTTCTATATATTTAGTTTTTCTTCATTTTTATTGATAACACCTGCAAGTTTCTTTAAGTTGGATGAGGGGGATTTTGGCATAGGAAATTTTAGAAAAAGGAGTAGGGCCCTTCTCCAAGTGGGTTTTGTAGATTCTATAAAGGACTATTTGGCATCCTATTATTAAAGAGAATACGGATAGGGATTTGGATGATTCATGAAGGAAAATTTCTATAGTAGCTGAAGAAGCCAGCCTTCTTTTCAATGACTTAAGTTACTTATCTGATCGACAAGTGGCAGAAGAATGTAGAAGGCCCTTGGCTGGGCTTGGTACCTGTCTTCTCCAAGGATCCAAAGCTTTTGTACTATCATCAGTGATAAGCACCAAGACACTAATAATTGCTAGATTTTTATCTTTTGAATTAATTTGCGATTTAGAGAAATTTGAAACTGGTCTCATATGAGTGGAGCTGTAGAGATTCAGATTCCGTAAATACCTATTGTTAATAATAAAAGAGGTAGTAAGACAAAATGACCTCTTTTCCCTCTTTGTAAAGGACCTTAGCATACTTTTTAGAATATAAGTTCTCCCACTTTTGTAGGTGAGCCAAGCAATTACCCGCGAACCCAATATTAACTTGTAAGCTATTTGAAGGAGTAGCAAAATTCATTTTGTGATCATCGTTGATGGTATAAACTCTGTAGGCAAAATTCCAGGAGATTCCCCTTGCTATATGAATACATTGTGTAGAAGGAGAAGTGAAGACTTAAAAACTGTATGTTGTGTTGATGCACTTCTAAGGACTTTCCAATGGTTGAAGGAGCCTGTTTCCATGGATAATGAAGGAAGTTATGTTGGGATATGGGCGGTTTATTTTAGCACTCAAGTTTCTCTGCTGTTATATGGACTATTTGATTAGAATGAGGAAAATTTTCATTTGGTCCTAAGTTATTAGCCAGGAACTTTTGTGAGAATGAAACAGGAAGGCTTTCGTTTATAGTGGTTGGGATTTTATCCTCAATGAGTTTGGTCTGCCCTTGTGTCTTCCGGATCAGATTGATAGCCGGTTGAATTCCTCTTATTTTACTTGGCCTTTCCCCGGTGTTCTTTGAATTAGTACTTTTGTTATACAAGCACAAACCATTAACATTGCTATGCATCAACAATGTTCCAGAAAGCACTTGCTGGCTTGAAACGCATCAATTTGGAAGGCCTGAGGTGGAGAGTGTTTGATGCCAAAGGCCAGGTTTGAATGCATTATTAACTCTTCACTTGATATTTGGTTTCTCAGATTATGAGATAGAATGTTCAACAGTAGTGATATTTGCTAGAAACAAAGAAAGCTGCTCTAACTTTTTCTACCAGGTTCTTGGGAGATTGGCATCTAAAATATCTACCGTGATTCAAGGCAAGGATAAGCCAACATATACACCCAATCGAGATGATGGGGATATGTGCATTGTGCTTAATGCTAAGGATATCGCTGTCACAGGAAGAAAACTCACTAAAAAAGTTTATTACTGGCATACAGGGTAAGTAAGTACTATATGTTTCTGTAGTTTTACTCAAAAAGTATTGGTCATTGGCACGTACTCTGAAGTTCGCTAATTTATTTTCATCAGTTAAGATTTGATCAGGATTTGTTTTGTTGAAATTTTAGGCAAGATTAGAACTACATTTGTTTTGTTGAAATTTTAGGCCGCATTTGGTTCTTAGTTTCAATTTCTCAAGTAAAAGAGTAGAATTTTTAGCCAAATTTCAAAACAAAACACTTCTCCAAAAACTACTTTTAAGTTTTCAAACCATTGCTTGCTTTTTAAAAACATTGATAAAAATTAGATAACCAAAAACAAAATATCAAATGGTTACCAAAGAGGGGTTTAGCTTTTGGTTAAATCTAAATGACTTAAGGCCTGTTTGGATTACTTTTCTAAGACTTCAAAAGAATTTTCTTCTCTTAAAAACCTTTTTCTAAACTCATAAAAATTCAATCCAAACAAGTCCTTGATTTCTGTCTGCAGAAAAGTAGAGGAAGGAGATCACTTTAGTGCTGCTTTGGTAATAGTAACACTTCGATGTGCTCTGTGTTTCATTATTTGTTTTCAACTATGCGTGGCCTTGTAGGTATGTTGGGCACCTGAAGGAAAGAACTTTGAGGGAACAGATGAACAGAGACCCTACAGAAGTCATACGTAAAGCTGTGTTACGCATGCTTCCAAAAAATAAACTGCGTGATGTTAGTCCTTAAATTTATTTGGTGTTTAAGATCTTTTGTTACCAATTGAGGATTAGCATCAGTTGTTTATTAAATCTTCATCCTTTTTCATCAGCCATTGGACACTGCAGGACGGGTATTTTATATTATAACTTCTATTTGATGCAGGATAGAGATCGAAAACTGAGAATTTTTGCTGGAGATGAACACCCTTTTGGCGACCGCCCACTTGAGCCCTATATCATGCCACCTCGTAATGTAAGAGAGATGCGGCCTCAGGTAAGACGGGCAATGATTCGAGCGCAAAAGAAGGCCGAGCAACAAGAAAACAGCAAGAGCGAACGAAAGGGAAGTAGAAAGAAAGAAGAGAAGGTAGAAGTGAAGGCCTGATTTCTTCTGCCCTTATGGGAGTTTTGTGTAGATCTGAATTAGTTGGGAATTTGATTGAATTGCATCAGGGCTGTCTTTAATTGAACCGAGTAACTTGGATTTGATATCATTTGTAAAGATATGATGCCCTGTTTGTTCAATGCTTGGATATCCAAGGGAAACGTGTTTAGTTTCTTTTTCTTAGATGCAACTAATAAGTTATTCTGTTGCTATTACACTTTACGATCACTTCCAATTATTCTTTTCTTTTAGAGATGAAAAGACATGGTGAAGTTGTCAGAAACAGAAC

mRNA sequence

TAATTATTAAAATTTTCTCATAGAAGAAGCTCTATGGTCTAAACCCTCCCTCCCATTTTCAGCCACTGCACACTGCCGCCCCTCTTGCCCGACACCGCCTTAGCAACTGCCGCCGCACACTGCACTCTCAGCTGCCGCAGCTTTGCTCTTCCGACGAGCTCGCCGCTGCTCCTTCCTTCTCACGCTCTTTCGTCTCTCCGAGCAATCGGAGTTACTTATCTCTATATTTCTCTCTCAGAAACACAGAGGTTCAGCCCCTCCACGCCGTTGCGAGAAGCTAGGACATTGATAATGGCAAGCCAAGCAGCTAGTTCTATCAATGGCAACATGAAGAAAGCACTTGCTGGCTTGAAACGCATCAATTTGGAAGGCCTGAGGTGGAGAGTGTTTGATGCCAAAGGCCAGGTTCTTGGGAGATTGGCATCTAAAATATCTACCGTGATTCAAGGCAAGGATAAGCCAACATATACACCCAATCGAGATGATGGGGATATGTGCATTGTGCTTAATGCTAAGGATATCGCTGTCACAGGAAGAAAACTCACTAAAAAAGTTTATTACTGGCATACAGGGTATGTTGGGCACCTGAAGGAAAGAACTTTGAGGGAACAGATGAACAGAGACCCTACAGAAGTCATACGTAAAGCTGTGTTACGCATGCTTCCAAAAAATAAACTGCGTGATGATAGAGATCGAAAACTGAGAATTTTTGCTGGAGATGAACACCCTTTTGGCGACCGCCCACTTGAGCCCTATATCATGCCACCTCGTAATGTAAGAGAGATGCGGCCTCAGGTAAGACGGGCAATGATTCGAGCGCAAAAGAAGGCCGAGCAACAAGAAAACAGCAAGAGCGAACGAAAGGGAAGTAGAAAGAAAGAAGAGAAGGTAGAAGTGAAGGCCTGATTTCTTCTGCCCTTATGGGAGTTTTGTGTAGATCTGAATTAGTTGGGAATTTGATTGAATTGCATCAGGGCTGTCTTTAATTGAACCGAGTAACTTGGATTTGATATCATTTGTAAAGATATGATGCCCTGTTTGTTCAATGCTTGGATATCCAAGGGAAACGTGTTTAGTTTCTTTTTCTTAGATGCAACTAATAAGTTATTCTGTTGCTATTACACTTTACGATCACTTCCAATTATTCTTTTCTTTTAGAGATGAAAAGACATGGTGAAGTTGTCAGAAACAGAAC

Coding sequence (CDS)

ATGGCAAGCCAAGCAGCTAGTTCTATCAATGGCAACATGAAGAAAGCACTTGCTGGCTTGAAACGCATCAATTTGGAAGGCCTGAGGTGGAGAGTGTTTGATGCCAAAGGCCAGGTTCTTGGGAGATTGGCATCTAAAATATCTACCGTGATTCAAGGCAAGGATAAGCCAACATATACACCCAATCGAGATGATGGGGATATGTGCATTGTGCTTAATGCTAAGGATATCGCTGTCACAGGAAGAAAACTCACTAAAAAAGTTTATTACTGGCATACAGGGTATGTTGGGCACCTGAAGGAAAGAACTTTGAGGGAACAGATGAACAGAGACCCTACAGAAGTCATACGTAAAGCTGTGTTACGCATGCTTCCAAAAAATAAACTGCGTGATGATAGAGATCGAAAACTGAGAATTTTTGCTGGAGATGAACACCCTTTTGGCGACCGCCCACTTGAGCCCTATATCATGCCACCTCGTAATGTAAGAGAGATGCGGCCTCAGGTAAGACGGGCAATGATTCGAGCGCAAAAGAAGGCCGAGCAACAAGAAAACAGCAAGAGCGAACGAAAGGGAAGTAGAAAGAAAGAAGAGAAGGTAGAAGTGAAGGCCTGA

Protein sequence

MASQAASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYTPNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAVLRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKKAEQQENSKSERKGSRKKEEKVEVKA

Homology

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BLAST of IVF0025304 vs. ExPASy Swiss-Prot
Match: Q1AU63 (50S ribosomal protein L13 OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129 / PRD-1) OX=266117 GN=rplM PE=3 SV=2)

HSP 1 Score: 140.2 bits (352), Expect = 2.6e-32
Identity = 64/127 (50.39%), Postives = 92/127 (72.44%), Query Frame = 0


Query: 29  RWRVFDAKGQVLGRLASKISTVIQGKDKPTYTPNRDDGDMCIVLNAKDIAVTGRKLTKKV 88
           +W V DA+G+ LGRLA++IS +++GK+KP YTP+ D GD  +V+NA  + VTGRK  +KV
Sbjct: 14  KWYVIDAEGKTLGRLAAEISRLLRGKNKPQYTPHVDVGDFVVVVNADKVEVTGRKAEQKV 73

Query: 89  YYWHTGYVGHLKERTLREQMNRDPTEVIRKAVLRMLPKNKLRDDRDRKLRIFAGDEHPFG 148
           Y WHTGY G L+ER+ R+ + + P E++R+AV  M+PK +L   + +KLRI+AG EHP  
Sbjct: 74  YRWHTGYPGGLRERSYRQMLRKRPEEILRQAVRGMMPKTRLARRQLKKLRIYAGPEHPHA 133

Query: 149 DRPLEPY 156
            +  EPY
Sbjct: 134 GQTPEPY 140

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BLAST of IVF0025304 vs. ExPASy Swiss-Prot
Match: Q18CJ1 (50S ribosomal protein L13 OS=Clostridioides difficile (strain 630) OX=272563 GN=rplM PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.2e-30
Identity = 63/117 (53.85%), Postives = 88/117 (75.21%), Query Frame = 0


Query: 29  RWRVFDAKGQVLGRLASKISTVIQGKDKPTYTPNRDDGDMCIVLNAKDIAVTGRKLTKKV 88
           +W + DA+G+ LGRLA++I+TV++GK KPT+TP+ D GD  +V+NA+ I ++G+KL +K 
Sbjct: 14  KWYLVDAEGKTLGRLATEIATVLRGKHKPTFTPHVDGGDFVVVVNAEKIVLSGKKLDQKY 73

Query: 89  YYWHTGYVGHLKERTLREQMNRDPTEVIRKAVLRMLPKNKLRDDRDRKLRIFAGDEH 146
           Y +HTGYVG LKE + R+ M++ P EVI  AV  MLPKNKLR     +LR+FAG EH
Sbjct: 74  YRYHTGYVGGLKEISYRDMMDKKPEEVISHAVSGMLPKNKLRSRMMTRLRVFAGAEH 130

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BLAST of IVF0025304 vs. ExPASy Swiss-Prot
Match: O67722 (50S ribosomal protein L13 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=rplM PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.2e-30
Identity = 65/126 (51.59%), Postives = 87/126 (69.05%), Query Frame = 0


Query: 29  RWRVFDAKGQVLGRLASKISTVIQGKDKPTYTPNRDDGDMCIVLNAKDIAVTGRKLTKKV 88
           +W V DA G+ LGRLAS+I+ +++GK KP Y P+ D GD  IV+NA+ I VTG+KL +K 
Sbjct: 14  KWWVVDATGKTLGRLASEIAKILRGKHKPYYQPDVDCGDFVIVINAEKIRVTGKKLEQKK 73

Query: 89  YYWHTGYVGHLKERTLREQMNRDPTEVIRKAVLRMLPKNKLRDDRDRKLRIFAGDEHPFG 148
           YYWH+ Y G LKERTL+  +   P EVIR AV RMLPKN+L     +KL+++ G EHP  
Sbjct: 74  YYWHSRYPGGLKERTLKWMLENKPEEVIRLAVKRMLPKNRLGHRMLKKLKVYRGPEHPHQ 133

Query: 149 DRPLEP 155
            +  +P
Sbjct: 134 AQKPQP 139

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BLAST of IVF0025304 vs. ExPASy Swiss-Prot
Match: B8G6P5 (50S ribosomal protein L13 OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) OX=326427 GN=rplM PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.6e-29
Identity = 64/127 (50.39%), Postives = 88/127 (69.29%), Query Frame = 0


Query: 30  WRVFDAKGQVLGRLASKISTVIQGKDKPTYTPNRDDGDMCIVLNAKDIAVTGRKLTKKVY 89
           W V DA G+VLGRLA++IST+++GK KPT+TP+ D GD  IV+NA+ I +TGRK  +K+Y
Sbjct: 15  WYVIDASGKVLGRLATQISTLLRGKHKPTFTPSIDGGDFVIVVNAEKIVLTGRKPEQKIY 74

Query: 90  YWHTGYVGHLKERTLREQMNRDPTEVIRKAVLRMLPKNKLRDDRDRKLRIFAGDEHPFGD 149
           Y H+GY G LKE   +  + + P  ++R AV RMLPKN++      KLRI+AG  HP   
Sbjct: 75  YRHSGYPGGLKEIPYKMMLAKHPERILRLAVKRMLPKNRMGRRLLSKLRIYAGPNHPHAA 134

Query: 150 RPLEPYI 157
           +  +PYI
Sbjct: 135 QQPKPYI 141

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BLAST of IVF0025304 vs. ExPASy Swiss-Prot
Match: A9WH96 (50S ribosomal protein L13 OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) OX=324602 GN=rplM PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.7e-29
Identity = 63/127 (49.61%), Postives = 87/127 (68.50%), Query Frame = 0


Query: 30  WRVFDAKGQVLGRLASKISTVIQGKDKPTYTPNRDDGDMCIVLNAKDIAVTGRKLTKKVY 89
           W V DA G+VLGRLA++IST+++GK KPT+TP+ D GD  IV+NA+ I +TGRK  +K+Y
Sbjct: 15  WYVIDASGKVLGRLATQISTLLRGKHKPTFTPSIDGGDFVIVVNAEKIVLTGRKPDQKIY 74

Query: 90  YWHTGYVGHLKERTLREQMNRDPTEVIRKAVLRMLPKNKLRDDRDRKLRIFAGDEHPFGD 149
           Y HTGY G +K    +  + + P  ++R AV RMLPKN++      KLRI+AG  HP   
Sbjct: 75  YRHTGYPGGIKATPYKMMLAKHPDRILRLAVKRMLPKNRMGRRLLSKLRIYAGPNHPHAA 134

Query: 150 RPLEPYI 157
           +  +PYI
Sbjct: 135 QQPKPYI 141

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BLAST of IVF0025304 vs. ExPASy TrEMBL
Match: A0A1S3B177 (50S ribosomal protein L13 OS=Cucumis melo OX=3656 GN=LOC103484711 PE=3 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 3.7e-106
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MASQAASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYT 60
           MASQAASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYT
Sbjct: 1   MASQAASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYT 60

Query: 61  PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAV 120
           PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAV
Sbjct: 61  PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAV 120

Query: 121 LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKKA 180
           LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKKA
Sbjct: 121 LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKKA 180

Query: 181 EQQENSKSERKGSRKKEEKVEVKA 205
           EQQENSKSERKGSRKKEEKVEVKA
Sbjct: 181 EQQENSKSERKGSRKKEEKVEVKA 204

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BLAST of IVF0025304 vs. ExPASy TrEMBL
Match: A0A0A0KL19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G487720 PE=3 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.2e-98
Identity = 191/204 (93.63%), Postives = 197/204 (96.57%), Query Frame = 0


Query: 1   MASQAASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYT 60
           MASQAA+SI GNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLAS+ISTVIQGKDKPTY 
Sbjct: 1   MASQAATSITGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYA 60

Query: 61  PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAV 120
           PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVG+LKERTLREQM RDPTEVIRKAV
Sbjct: 61  PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGNLKERTLREQMTRDPTEVIRKAV 120

Query: 121 LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKKA 180
           LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQK A
Sbjct: 121 LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKMA 180

Query: 181 EQQENSKSERKGSRKKEEKVEVKA 205
           EQQ+N+K+E K SRKKEEKVEV A
Sbjct: 181 EQQQNNKNEGKESRKKEEKVEVTA 204

[Close]

BLAST of IVF0025304 vs. ExPASy TrEMBL
Match: A0A6J1BUX0 (uncharacterized protein LOC111005959 OS=Momordica charantia OX=3673 GN=LOC111005959 PE=3 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.0e-92
Identity = 178/204 (87.25%), Postives = 193/204 (94.61%), Query Frame = 0


Query: 1   MASQAASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYT 60
           MASQAASS NGNMKKALAGL+RINLEGLRWRVFDAKGQVLGRLAS+ISTV+QGKDKPTYT
Sbjct: 1   MASQAASSFNGNMKKALAGLRRINLEGLRWRVFDAKGQVLGRLASQISTVVQGKDKPTYT 60

Query: 61  PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAV 120
           PNRDDGDMCIVLNAKDI VTGRKLT K Y+WHTGYVG+LKER+L++Q+ +DPTEVIRKAV
Sbjct: 61  PNRDDGDMCIVLNAKDICVTGRKLTDKFYHWHTGYVGNLKERSLKDQLAKDPTEVIRKAV 120

Query: 121 LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKKA 180
           LRMLP+NKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVRE+RP+VRRAMIRAQKKA
Sbjct: 121 LRMLPRNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVRELRPRVRRAMIRAQKKA 180

Query: 181 EQQENSKSERKGSRKKEEKVEVKA 205
           EQQ N  +E + SRKKEEKVEV A
Sbjct: 181 EQQTNGSNESRKSRKKEEKVEVIA 204

[Close]

BLAST of IVF0025304 vs. ExPASy TrEMBL
Match: A0A6J1CC45 (uncharacterized protein LOC111010318 OS=Momordica charantia OX=3673 GN=LOC111010318 PE=3 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.6e-91
Identity = 175/204 (85.78%), Postives = 192/204 (94.12%), Query Frame = 0


Query: 1   MASQAASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYT 60
           MASQAA+S NGNMKKALAGL+RINLEGLRWRVFDAKGQVLGRLAS+ISTV+QGKDKPTY 
Sbjct: 1   MASQAATSFNGNMKKALAGLRRINLEGLRWRVFDAKGQVLGRLASQISTVVQGKDKPTYA 60

Query: 61  PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAV 120
           PNRDDGDMCIVLNAKDI VTGRKLT K Y+WHTGYVG+LKER+L++Q+ +DPTEVIRKAV
Sbjct: 61  PNRDDGDMCIVLNAKDICVTGRKLTDKFYHWHTGYVGNLKERSLKDQLAKDPTEVIRKAV 120

Query: 121 LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKKA 180
           LRMLP+N+LRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVRE+RP+VRRAMIRAQKKA
Sbjct: 121 LRMLPRNELRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVRELRPRVRRAMIRAQKKA 180

Query: 181 EQQENSKSERKGSRKKEEKVEVKA 205
           EQQ N  +E + SRKKEEKVEV A
Sbjct: 181 EQQTNGNNESRKSRKKEEKVEVIA 204

[Close]

BLAST of IVF0025304 vs. ExPASy TrEMBL
Match: A0A6J1KX97 (uncharacterized protein LOC111497191 OS=Cucurbita maxima OX=3661 GN=LOC111497191 PE=3 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.8e-90
Identity = 173/204 (84.80%), Postives = 190/204 (93.14%), Query Frame = 0


Query: 1   MASQAASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYT 60
           MASQ A++ NGNMK+ALAG+KRINLEGLRWRVFDAKGQVLGRLAS+ISTVIQGKDKPTY 
Sbjct: 1   MASQVATTFNGNMKRALAGIKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYA 60

Query: 61  PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAV 120
           PNRDDGDMCIVLNAKDI V+GRK T K+YYWHTGYVG+LKER+L++QM +DPTEVIRKAV
Sbjct: 61  PNRDDGDMCIVLNAKDIYVSGRKPTDKIYYWHTGYVGNLKERSLKDQMAKDPTEVIRKAV 120

Query: 121 LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKKA 180
           LRMLP+NKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRP+ RRAMIRAQKKA
Sbjct: 121 LRMLPRNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPRARRAMIRAQKKA 180

Query: 181 EQQENSKSERKGSRKKEEKVEVKA 205
           EQQ+N  +  K +RKKEEKVEV A
Sbjct: 181 EQQQNDDNHSKKNRKKEEKVEVIA 204

[Close]

BLAST of IVF0025304 vs. NCBI nr
Match: XP_008440163.1 (PREDICTED: 50S ribosomal protein L13 [Cucumis melo] >XP_008440164.1 PREDICTED: 50S ribosomal protein L13 [Cucumis melo])

HSP 1 Score: 393 bits (1010), Expect = 9.75e-138
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MASQAASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYT 60
           MASQAASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYT
Sbjct: 1   MASQAASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYT 60

Query: 61  PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAV 120
           PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAV
Sbjct: 61  PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAV 120

Query: 121 LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKKA 180
           LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKKA
Sbjct: 121 LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKKA 180

Query: 181 EQQENSKSERKGSRKKEEKVEVKA 204
           EQQENSKSERKGSRKKEEKVEVKA
Sbjct: 181 EQQENSKSERKGSRKKEEKVEVKA 204

[Close]

BLAST of IVF0025304 vs. NCBI nr
Match: XP_011657807.1 (uncharacterized protein LOC101204778 [Cucumis sativus] >XP_011657808.1 uncharacterized protein LOC101204778 [Cucumis sativus] >KGN48451.1 hypothetical protein Csa_004216 [Cucumis sativus])

HSP 1 Score: 367 bits (943), Expect = 1.60e-127
Identity = 191/204 (93.63%), Postives = 197/204 (96.57%), Query Frame = 0


Query: 1   MASQAASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYT 60
           MASQAA+SI GNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLAS+ISTVIQGKDKPTY 
Sbjct: 1   MASQAATSITGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYA 60

Query: 61  PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAV 120
           PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVG+LKERTLREQM RDPTEVIRKAV
Sbjct: 61  PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGNLKERTLREQMTRDPTEVIRKAV 120

Query: 121 LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKKA 180
           LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQK A
Sbjct: 121 LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKMA 180

Query: 181 EQQENSKSERKGSRKKEEKVEVKA 204
           EQQ+N+K+E K SRKKEEKVEV A
Sbjct: 181 EQQQNNKNEGKESRKKEEKVEVTA 204

[Close]

BLAST of IVF0025304 vs. NCBI nr
Match: XP_038883188.1 (50S ribosomal protein L13 isoform X3 [Benincasa hispida])

HSP 1 Score: 357 bits (915), Expect = 2.96e-123
Identity = 184/202 (91.09%), Postives = 194/202 (96.04%), Query Frame = 0


Query: 1   MASQAASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYT 60
           MASQAASS+NGN+KKALAGL+RINLEGLRWRVFDAKGQVLGRLAS+ISTVIQGKDKPTYT
Sbjct: 1   MASQAASSLNGNLKKALAGLRRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYT 60

Query: 61  PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAV 120
           PNRDDGDMCIVLNAKDIAVTGRKLT KVYYWHTGYVG+LKER L++QM +DPTEVIRKAV
Sbjct: 61  PNRDDGDMCIVLNAKDIAVTGRKLTDKVYYWHTGYVGNLKERNLKDQMAKDPTEVIRKAV 120

Query: 121 LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKKA 180
           LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPR VREMRPQVRRAMIRAQKKA
Sbjct: 121 LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRKVREMRPQVRRAMIRAQKKA 180

Query: 181 EQQENSKSERKGSRKKEEKVEV 202
           EQQ+NS +  K SRKKEEKVEV
Sbjct: 181 EQQQNSANVVKKSRKKEEKVEV 202

[Close]

BLAST of IVF0025304 vs. NCBI nr
Match: XP_022133371.1 (uncharacterized protein LOC111005959 [Momordica charantia])

HSP 1 Score: 349 bits (895), Expect = 3.30e-120
Identity = 177/202 (87.62%), Postives = 192/202 (95.05%), Query Frame = 0


Query: 1   MASQAASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYT 60
           MASQAASS NGNMKKALAGL+RINLEGLRWRVFDAKGQVLGRLAS+ISTV+QGKDKPTYT
Sbjct: 1   MASQAASSFNGNMKKALAGLRRINLEGLRWRVFDAKGQVLGRLASQISTVVQGKDKPTYT 60

Query: 61  PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAV 120
           PNRDDGDMCIVLNAKDI VTGRKLT K Y+WHTGYVG+LKER+L++Q+ +DPTEVIRKAV
Sbjct: 61  PNRDDGDMCIVLNAKDICVTGRKLTDKFYHWHTGYVGNLKERSLKDQLAKDPTEVIRKAV 120

Query: 121 LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKKA 180
           LRMLP+NKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVRE+RP+VRRAMIRAQKKA
Sbjct: 121 LRMLPRNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVRELRPRVRRAMIRAQKKA 180

Query: 181 EQQENSKSERKGSRKKEEKVEV 202
           EQQ N  +E + SRKKEEKVEV
Sbjct: 181 EQQTNGSNESRKSRKKEEKVEV 202

[Close]

BLAST of IVF0025304 vs. NCBI nr
Match: XP_022139365.1 (uncharacterized protein LOC111010318 [Momordica charantia])

HSP 1 Score: 344 bits (883), Expect = 2.23e-118
Identity = 174/202 (86.14%), Postives = 191/202 (94.55%), Query Frame = 0


Query: 1   MASQAASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYT 60
           MASQAA+S NGNMKKALAGL+RINLEGLRWRVFDAKGQVLGRLAS+ISTV+QGKDKPTY 
Sbjct: 1   MASQAATSFNGNMKKALAGLRRINLEGLRWRVFDAKGQVLGRLASQISTVVQGKDKPTYA 60

Query: 61  PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAV 120
           PNRDDGDMCIVLNAKDI VTGRKLT K Y+WHTGYVG+LKER+L++Q+ +DPTEVIRKAV
Sbjct: 61  PNRDDGDMCIVLNAKDICVTGRKLTDKFYHWHTGYVGNLKERSLKDQLAKDPTEVIRKAV 120

Query: 121 LRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQKKA 180
           LRMLP+N+LRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVRE+RP+VRRAMIRAQKKA
Sbjct: 121 LRMLPRNELRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVRELRPRVRRAMIRAQKKA 180

Query: 181 EQQENSKSERKGSRKKEEKVEV 202
           EQQ N  +E + SRKKEEKVEV
Sbjct: 181 EQQTNGNNESRKSRKKEEKVEV 202

[Close]

BLAST of IVF0025304 vs. TAIR 10
Match: AT3G01790.1 (Ribosomal protein L13 family protein )

HSP 1 Score: 299.3 bits (765), Expect = 2.4e-81
Identity = 150/198 (75.76%), Postives = 173/198 (87.37%), Query Frame = 0


Query: 1   MASQ--AASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPT 60
           MA+Q  AA+S  GN+KKA+AG+KRINL+GLRWRVFDA+GQVLGRLAS+ISTV+Q KDKPT
Sbjct: 1   MATQAAAAASFKGNLKKAVAGIKRINLDGLRWRVFDARGQVLGRLASQISTVLQAKDKPT 60

Query: 61  YTPNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRK 120
           Y PNRDDGD+CIVLNAK+I  TGRKLT K Y WHTGY+GHLKER+L++QM +DPTEVIRK
Sbjct: 61  YCPNRDDGDICIVLNAKEIGFTGRKLTDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRK 120

Query: 121 AVLRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQK 180
           AV RMLP N LRDDRDRKLRIF G EHPFGD+PLEP++MPPR VREMRP+ RRAMIRAQK
Sbjct: 121 AVWRMLPSNNLRDDRDRKLRIFEGGEHPFGDKPLEPFVMPPRRVREMRPRARRAMIRAQK 180

Query: 181 KAEQQENSKSERKGSRKK 197
           KAEQ EN  +E K  +K+
Sbjct: 181 KAEQAENEGTEVKKGKKR 198

[Close]

BLAST of IVF0025304 vs. TAIR 10
Match: AT3G01790.2 (Ribosomal protein L13 family protein )

HSP 1 Score: 299.3 bits (765), Expect = 2.4e-81
Identity = 150/198 (75.76%), Postives = 173/198 (87.37%), Query Frame = 0


Query: 1   MASQ--AASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPT 60
           MA+Q  AA+S  GN+KKA+AG+KRINL+GLRWRVFDA+GQVLGRLAS+ISTV+Q KDKPT
Sbjct: 1   MATQAAAAASFKGNLKKAVAGIKRINLDGLRWRVFDARGQVLGRLASQISTVLQAKDKPT 60

Query: 61  YTPNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRK 120
           Y PNRDDGD+CIVLNAK+I  TGRKLT K Y WHTGY+GHLKER+L++QM +DPTEVIRK
Sbjct: 61  YCPNRDDGDICIVLNAKEIGFTGRKLTDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRK 120

Query: 121 AVLRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEPYIMPPRNVREMRPQVRRAMIRAQK 180
           AV RMLP N LRDDRDRKLRIF G EHPFGD+PLEP++MPPR VREMRP+ RRAMIRAQK
Sbjct: 121 AVWRMLPSNNLRDDRDRKLRIFEGGEHPFGDKPLEPFVMPPRRVREMRPRARRAMIRAQK 180

Query: 181 KAEQQENSKSERKGSRKK 197
           KAEQ EN  +E K  +K+
Sbjct: 181 KAEQAENEGTEVKKGKKR 198

[Close]

BLAST of IVF0025304 vs. TAIR 10
Match: AT1G78630.1 (Ribosomal protein L13 family protein )

HSP 1 Score: 90.9 bits (224), Expect = 1.3e-18
Identity = 51/135 (37.78%), Postives = 79/135 (58.52%), Query Frame = 0


Query: 30  WRVFDAKGQVLGRLASKISTVIQGKDKPTYTPNRDDGDMCIVLNAKDIAVTGRKLTKKVY 89
           W V DA  ++LGRLAS I+  I+GK+  +YTP+ D G   IV+NA+ +AV+G+K  +K+Y
Sbjct: 105 WFVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLY 164

Query: 90  YWHTGYVGHLKERTLREQMNRDPTEVIRKAVLRMLPKNKLRDDRDRKLRIFAGDEHPF-G 149
             H+G  G +   T  +   R P  ++  AV  MLPK +L       L+++ G +HP   
Sbjct: 165 RRHSGRPGGMTVETFDQLQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEA 224

Query: 150 DRPLEPYIMPPRNVR 164
            +PL+   +P R+ R
Sbjct: 225 QKPLD---LPIRDKR 236

The following BLAST results are available for this feature:

BLAST of IVF0025304 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1AU63	2.6e-32	50.39	50S ribosomal protein L13 OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16...	[more]
Q18CJ1	3.2e-30	53.85	50S ribosomal protein L13 OS=Clostridioides difficile (strain 630) OX=272563 GN=...	[more]
O67722	4.2e-30	51.59	50S ribosomal protein L13 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=rplM PE=...	[more]
B8G6P5	1.6e-29	50.39	50S ribosomal protein L13 OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) OX...	[more]
A9WH96	2.7e-29	49.61	50S ribosomal protein L13 OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 6...	[more]

BLAST of IVF0025304 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B177	3.7e-106	100.00	50S ribosomal protein L13 OS=Cucumis melo OX=3656 GN=LOC103484711 PE=3 SV=1	[more]
A0A0A0KL19	2.2e-98	93.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G487720 PE=3 SV=1	[more]
A0A6J1BUX0	1.0e-92	87.25	uncharacterized protein LOC111005959 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1CC45	2.6e-91	85.78	uncharacterized protein LOC111010318 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A6J1KX97	2.8e-90	84.80	uncharacterized protein LOC111497191 OS=Cucurbita maxima OX=3661 GN=LOC111497191...	[more]

BLAST of IVF0025304 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440163.1	9.75e-138	100.00	PREDICTED: 50S ribosomal protein L13 [Cucumis melo] >XP_008440164.1 PREDICTED: 5...	[more]
XP_011657807.1	1.60e-127	93.63	uncharacterized protein LOC101204778 [Cucumis sativus] >XP_011657808.1 uncharact...	[more]
XP_038883188.1	2.96e-123	91.09	50S ribosomal protein L13 isoform X3 [Benincasa hispida]	[more]
XP_022133371.1	3.30e-120	87.62	uncharacterized protein LOC111005959 [Momordica charantia]	[more]
XP_022139365.1	2.23e-118	86.14	uncharacterized protein LOC111010318 [Momordica charantia]	[more]

BLAST of IVF0025304 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01790.1	2.4e-81	75.76	Ribosomal protein L13 family protein	[more]
AT3G01790.2	2.4e-81	75.76	Ribosomal protein L13 family protein	[more]
AT1G78630.1	1.3e-18	37.78	Ribosomal protein L13 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005822	Ribosomal protein L13	PFAM	PF00572	Ribosomal_L13	coord: 29..146 e-value: 2.1E-45 score: 153.7
IPR005822	Ribosomal protein L13	PIRSF	PIRSF002181	RPL13p_RPL13Aa_RPL16e_RPL13o	coord: 13..199 e-value: 8.8E-53 score: 176.4
IPR005822	Ribosomal protein L13	PANTHER	PTHR11545	RIBOSOMAL PROTEIN L13	coord: 11..185
IPR005822	Ribosomal protein L13	HAMAP	MF_01366	Ribosomal_L13	coord: 30..153 score: 26.215872
IPR005822	Ribosomal protein L13	CDD	cd00392	Ribosomal_L13	coord: 30..143 e-value: 4.74427E-55 score: 168.837
IPR036899	Ribosomal protein L13 superfamily	GENE3D	3.90.1180.10	Ribosomal protein L13	coord: 26..170 e-value: 3.4E-60 score: 204.2
IPR036899	Ribosomal protein L13 superfamily	SUPERFAMILY	52161	Ribosomal protein L13	coord: 29..151
IPR005823	Ribosomal protein L13, bacterial-type	TIGRFAM	TIGR01066	TIGR01066	coord: 29..147 e-value: 7.0E-46 score: 153.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..204
None	No IPR available	PANTHER	PTHR11545:SF2	39S RIBOSOMAL PROTEIN L13, MITOCHONDRIAL	coord: 11..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0025304.6	IVF0025304.6	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017148	negative regulation of translation
biological_process	GO:0006412	translation
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome