IVF0025302 (gene) Melon (IVF77) v1

Overview
NameIVF0025302
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr01: 1263894 .. 1265406 (+)
RNA-Seq ExpressionIVF0025302
SyntenyIVF0025302
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGCCCAAATCCATTGGCTTCGTGTACCCATTTCTTTCTAATCGGATCACCTCATCTTTCTTCACTATTTCTTCCCTTTTAACCTATTCAACACAACGAAATCTGAATTCTGAATCTGTTTGTGGTCGTCCTCATGATGCAGTTATCAATGCTTCTCTTCAATCTCCACAATTAGAACAATCCCTTGATAGTTTTAAACTAATGGTCCTTAAAGGTCATTCTCCGAGTTCATACTCTTTCAATAATGTATTGGATTTACTTGCTAAATCAGGGAATCTGGATAGAACTTGGTGGTTTTCACTGAATATTTGGGGAGGACTCAGTTTGACGTGTATAGTTTCGGGATTACGATTAAAGCCTTTTGTGAAAATGGCAACGTAAGTAAAGGCTTTGAGCTTTTGGCTCAAATGGAGACGATGGGCGTGTCTCCTAATGTTTTTATATACACTATCTTGATTGAAGCTTGTTGCAAAAATGGTGATATTGATCAAGCTAAAGTAATGTTTTCTAGGATGGATGACCTTGGTTTGGCTGCTGACCAATATATTTATACAGTCATGATCAATGGATTTTTCAAGAAAGGTTACAAGAAGGATGGTTTTGAGCTTTATGAGAAGATGAAGCTCATGGGGGTACTTCCCAATTTATATACTTACAACAGTCTCATTACTGAATATTGTAGGGATGGAAATTGAGCCTTGCATTTAAGTTGTTTGATGAAATATCTAAAAGAGGGGTGGCATGTAATGCAGTCACATACAATATTCTAATAGGTGGGTTATGTCGCAAGGGACAAGTGTTGAAAGCTGAAGGACTGTTAGAACGTATGAAACGAGCTCATATAAATCCAACTACTAGAACATTTAACCTGTTGATGGATGGGTTGTGTAACACTGGAAAGTTGGACAAGGCCTTAAGTTATCTCGATAAACTGAAGTTGATTGGTCAATCTCCAACTCTAGTGACCTACAATATTTTAATTTCAGGTTTTTCTAAAGTAGGAAATTCTTCTGTAGTTTCAGAGTTAGTGAGGGAGATGGAGGACAGAGGTATTTCTCCCTCGAAAGTGACGTATACGATTTTGATGGATGCGTTTGTTCGATCCGATGATATAGAGAAAGCCTATGAGATGTTTCATCTCATGAAGAGAATTGGTTTGGTCCCGGATCAGCATACCTATGGTGTCCTAATCCATGGTTTGTGTATAAGAGGTAATATGGTTGAGGCATCAAAACTATACAAATCAATGGTAGAGATGCATCTAGAGCCTAATGATGTTATCTATAATACAATGATAAATGGGTACTGCAAAGAGTGCAACTCCTACAAGGCTTTAAAGTTTCTTGAAGAGATGGTTAAAAATGGAGTAACTCCAAATGTGGCTAGTTACATTTCCACCATTCAAGTCCTCTGCAAGGATGGGAAGTCCATTGAGGCGAAACGGTTACTTAAAGAGATGACTGAAGCCGGTTTGAAGCCGCCGGAATCTCTCCGTAGTAAAGTTGGTTAA

mRNA sequence

ATGGTGCCCAAATCCATTGGCTTCGTGTACCCATTTCTTTCTAATCGGATCACCTCATCTTTCTTCACTATTTCTTCCCTTTTAACCTATTCAACACAACGAAATCTGAATTCTGAATCTGTTTGTGGTCGTCCTCATGATGCAGTTATCAATGCTTCTCTTCAATCTCCACAATTAGAACAATCCCTTGATAGTTTTAAACTAATGGTCCTTAAAGGTCATTCTCCGAGTTCATACTCTTTCAATAATAACTTGGTGGTTTTCACTGAATATTTGGGGAGGACTCAGTTTGACGTGTATAGTTTCGGGATTACGATTAAAGCCTTTTGTGAAAATGGCAACGTAAGTAAAGGCTTTGAGCTTTTGGCTCAAATGGAGACGATGGGCGTGTCTCCTAATGTTTTTATATACACTATCTTGATTGAAGCTTGTTGCAAAAATGGTGATATTGATCAAGCTAAAGTAATGTTTTCTAGGATGGATGACCTTGGTTTGGCTGCTGACCAATATATTTATACAGTCATGATCAATGGATTTTTCAAGAAAGGTTACAAGAAGGATGGTTTTGAGCTTTATGAGAAGATGAAGCTCATGGGGGTACTTCCCAATTTATATACTTACAACAGTCTCATTACTGAATATTGGGTGGCATGTAATGCAGTCACATACAATATTCTAATAGGTGGGTTATGTCGCAAGGGACAAGTGTTGAAAGCTGAAGGACTGTTAGAACGTATGAAACGAGCTCATATAAATCCAACTACTAGAACATTTAACCTGTTGATGGATGGGTTGTGTAACACTGGAAAGTTGGACAAGGCCTTAAGTTATCTCGATAAACTGAAGTTGATTGGTCAATCTCCAACTCTAGTGACCTACAATATTTTAATTTCAGGTTTTTCTAAAGTAGGAAATTCTTCTGTAGTTTCAGAGTTAGTGAGGGAGATGGAGGACAGAGGTATTTCTCCCTCGAAAGTGACGTATACGATTTTGATGGATGCGTTTGTTCGATCCGATGATATAGAGAAAGCCTATGAGATGTTTCATCTCATGAAGAGAATTGGTTTGGTCCCGGATCAGCATACCTATGGTGTCCTAATCCATGGTTTGTGTATAAGAGGTAATATGGTTGAGGCATCAAAACTATACAAATCAATGGTAGAGATGCATCTAGAGCCTAATGATGTTATCTATAATACAATGATAAATGGGTACTGCAAAGAGTGCAACTCCTACAAGGCTTTAAAGTTTCTTGAAGAGATGGTTAAAAATGGAGTAACTCCAAATGTGGCTAGTTACATTTCCACCATTCAAGTCCTCTGCAAGGATGGGAAGTCCATTGAGGCGAAACGGTTACTTAAAGAGATGACTGAAGCCGGTTTGAAGCCGCCGGAATCTCTCCGTAGTAAAGTTGGTTAA

Coding sequence (CDS)

ATGGTGCCCAAATCCATTGGCTTCGTGTACCCATTTCTTTCTAATCGGATCACCTCATCTTTCTTCACTATTTCTTCCCTTTTAACCTATTCAACACAACGAAATCTGAATTCTGAATCTGTTTGTGGTCGTCCTCATGATGCAGTTATCAATGCTTCTCTTCAATCTCCACAATTAGAACAATCCCTTGATAGTTTTAAACTAATGGTCCTTAAAGGTCATTCTCCGAGTTCATACTCTTTCAATAATAACTTGGTGGTTTTCACTGAATATTTGGGGAGGACTCAGTTTGACGTGTATAGTTTCGGGATTACGATTAAAGCCTTTTGTGAAAATGGCAACGTAAGTAAAGGCTTTGAGCTTTTGGCTCAAATGGAGACGATGGGCGTGTCTCCTAATGTTTTTATATACACTATCTTGATTGAAGCTTGTTGCAAAAATGGTGATATTGATCAAGCTAAAGTAATGTTTTCTAGGATGGATGACCTTGGTTTGGCTGCTGACCAATATATTTATACAGTCATGATCAATGGATTTTTCAAGAAAGGTTACAAGAAGGATGGTTTTGAGCTTTATGAGAAGATGAAGCTCATGGGGGTACTTCCCAATTTATATACTTACAACAGTCTCATTACTGAATATTGGGTGGCATGTAATGCAGTCACATACAATATTCTAATAGGTGGGTTATGTCGCAAGGGACAAGTGTTGAAAGCTGAAGGACTGTTAGAACGTATGAAACGAGCTCATATAAATCCAACTACTAGAACATTTAACCTGTTGATGGATGGGTTGTGTAACACTGGAAAGTTGGACAAGGCCTTAAGTTATCTCGATAAACTGAAGTTGATTGGTCAATCTCCAACTCTAGTGACCTACAATATTTTAATTTCAGGTTTTTCTAAAGTAGGAAATTCTTCTGTAGTTTCAGAGTTAGTGAGGGAGATGGAGGACAGAGGTATTTCTCCCTCGAAAGTGACGTATACGATTTTGATGGATGCGTTTGTTCGATCCGATGATATAGAGAAAGCCTATGAGATGTTTCATCTCATGAAGAGAATTGGTTTGGTCCCGGATCAGCATACCTATGGTGTCCTAATCCATGGTTTGTGTATAAGAGGTAATATGGTTGAGGCATCAAAACTATACAAATCAATGGTAGAGATGCATCTAGAGCCTAATGATGTTATCTATAATACAATGATAAATGGGTACTGCAAAGAGTGCAACTCCTACAAGGCTTTAAAGTTTCTTGAAGAGATGGTTAAAAATGGAGTAACTCCAAATGTGGCTAGTTACATTTCCACCATTCAAGTCCTCTGCAAGGATGGGAAGTCCATTGAGGCGAAACGGTTACTTAAAGAGATGACTGAAGCCGGTTTGAAGCCGCCGGAATCTCTCCGTAGTAAAGTTGGTTAA

Protein sequence

MVPKSIGFVYPFLSNRITSSFFTISSLLTYSTQRNLNSESVCGRPHDAVINASLQSPQLEQSLDSFKLMVLKGHSPSSYSFNNNLVVFTEYLGRTQFDVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVMFSRMDDLGLAADQYIYTVMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLITEYWVACNAVTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTTRTFNLLMDGLCNTGKLDKALSYLDKLKLIGQSPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMDAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGNMVEASKLYKSMVEMHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIEAKRLLKEMTEAGLKPPESLRSKVG
Homology
[Close]
BLAST of IVF0025302 vs. ExPASy Swiss-Prot
Match: Q9T0D6 (Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana OX=3702 GN=At4g11690 PE=2 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 1.6e-125
Identity = 243/491 (49.49%), Postives = 319/491 (64.97%), Query Frame = 0 

Query: 13  LSNRITSSFFTISSLLTYSTQRNLNSESVCGRPHDAVINASLQSPQLEQSLDSFKLMVLK 72
           +S +I S FFT SSLL Y T+   +      R ++ +IN+ +QS  L  S+  F  MV  
Sbjct: 66  ISGKIHSQFFTSSSLLHYLTESETSKTKF--RLYEVIINSYVQSQSLNLSISYFNEMVDN 125

Query: 73  GHSPSSYSFNNNLV-------------VFTEYLGRTQFDVYSFGITIKAFCENGNVSKGF 132
           G  P S  FN  L               F E   +   DVYSFGI IK  CE G + K F
Sbjct: 126 GFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSF 185

Query: 133 ELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVMFSRMDDLGLAADQYIYTVMINGF 192
           +LL ++   G SPNV IYT LI+ CCK G+I++AK +F  M  LGL A++  YTV+ING 
Sbjct: 186 DLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGL 245

Query: 193 FKKGYKKDGFELYEKMKLMGVLPNLYTYNSLIT-------------------EYWVACNA 252
           FK G KK GFE+YEKM+  GV PNLYTYN ++                    E  V+CN 
Sbjct: 246 FKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNI 305

Query: 253 VTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTTRTFNLLMDGLCNTGKLDKALSYLDK 312
           VTYN LIGGLCR+ ++ +A  ++++MK   INP   T+N L+DG C  GKL KALS    
Sbjct: 306 VTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRD 365

Query: 313 LKLIGQSPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMDAFVRSDD 372
           LK  G SP+LVTYNIL+SGF + G++S  +++V+EME+RGI PSKVTYTIL+D F RSD+
Sbjct: 366 LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDN 425

Query: 373 IEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGNMVEASKLYKSMVEMHLEPNDVIYNT 432
           +EKA ++   M+ +GLVPD HTY VLIHG CI+G M EAS+L+KSMVE + EPN+VIYNT
Sbjct: 426 MEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT 485

Query: 433 MINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIEAKRLLKEMTEAG 472
           MI GYCKE +SY+ALK L+EM +  + PNVASY   I+VLCK+ KS EA+RL+++M ++G
Sbjct: 486 MILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSG 545

[Close]
BLAST of IVF0025302 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.5e-54
Identity = 120/394 (30.46%), Postives = 197/394 (50.00%), Query Frame = 0 

Query: 98  DVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVMF 157
           DV ++   +++ C++G + +  E+L +M      P+V  YTILIEA C++  +  A  + 
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 262

Query: 158 SRMDDLGLAADQYIYTVMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLI-----T 217
             M D G   D   Y V++NG  K+G   +  +    M   G  PN+ T+N ++     T
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322

Query: 218 EYWV--------------ACNAVTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTTRTF 277
             W+              + + VT+NILI  LCRKG + +A  +LE+M +    P + ++
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382

Query: 278 NLLMDGLCNTGKLDKALSYLDKLKLIGQSPTLVTYNILISGFSKVGNSSVVSELVREMED 337
           N L+ G C   K+D+A+ YL+++   G  P +VTYN +++   K G      E++ ++  
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442

Query: 338 RGISPSKVTYTILMDAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGNMVE 397
           +G SP  +TY  ++D   ++    KA ++   M+   L PD  TY  L+ GL   G + E
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502

Query: 398 ASKLYKSMVEMHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQ 457
           A K +     M + PN V +N+++ G CK   + +A+ FL  M+  G  PN  SY   I+
Sbjct: 503 AIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIE 562

Query: 458 VLCKDGKSIEAKRLLKEMTEAGLKPPESLRSKVG 473
            L  +G + EA  LL E+   GL    S     G
Sbjct: 563 GLAYEGMAKEALELLNELCNKGLMKKSSAEQVAG 596

[Close]
BLAST of IVF0025302 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 8.1e-53
Identity = 118/352 (33.52%), Postives = 184/352 (52.27%), Query Frame = 0 

Query: 114 NVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVMFSRMDDLGLAADQYIYT 173
           N+S    +  +M    VSPNVF Y ILI   C  G+ID A  +F +M+  G   +   Y 
Sbjct: 185 NISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYN 244

Query: 174 VMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLITEYWVACNAVTYNILIGGLCRK 233
            +I+G+ K     DGF+L   M L G+ PNL                ++YN++I GLCR+
Sbjct: 245 TLIDGYCKLRKIDDGFKLLRSMALKGLEPNL----------------ISYNVVINGLCRE 304

Query: 234 GQVLKAEGLLERMKRAHINPTTRTFNLLMDGLCNTGKLDKALSYLDKLKLIGQSPTLVTY 293
           G++ +   +L  M R   +    T+N L+ G C  G   +AL    ++   G +P+++TY
Sbjct: 305 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 364

Query: 294 NILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMDAFVRSDDIEKAYEMFHLMKR 353
             LI    K GN +   E + +M  RG+ P++ TYT L+D F +   + +AY +   M  
Sbjct: 365 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 424

Query: 354 IGLVPDQHTYGVLIHGLCIRGNMVEASKLYKSMVEMHLEPNDVIYNTMINGYCKECNSYK 413
            G  P   TY  LI+G C+ G M +A  + + M E  L P+ V Y+T+++G+C+  +  +
Sbjct: 425 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDE 484

Query: 414 ALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIEAKRLLKEMTEAGLKPPE 466
           AL+   EMV+ G+ P+  +Y S IQ  C+  ++ EA  L +EM   GL P E
Sbjct: 485 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE 520

[Close]
BLAST of IVF0025302 vs. ExPASy Swiss-Prot
Match: Q9ASZ8 (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX=3702 GN=At1g12620 PE=2 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 6.8e-52
Identity = 127/445 (28.54%), Postives = 220/445 (49.44%), Query Frame = 0 

Query: 49  VINASLQSPQLEQSLDSFKLMVLKGHSPSSYSFN------------NNLVVFTEYLGRTQ 108
           +IN      ++ ++L+    MV  GH P+  + N            ++ V+  + +  T 
Sbjct: 148 LINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETG 207

Query: 109 F--DVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAK 168
           F  +  ++G  +K  C++G  +   ELL +ME   +  +   Y+I+I+  CK+G +D A 
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267

Query: 169 VMFSRMDDLGLAADQYIYTVMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLI--- 228
            +F+ M+  G  AD  IYT +I GF   G   DG +L   M    + P++  +++LI   
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327

Query: 229 ----------------TEYWVACNAVTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTT 288
                            +  ++ + VTY  LI G C++ Q+ KA  +L+ M      P  
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387

Query: 289 RTFNLLMDGLCNTGKLDKALSYLDKLKLIGQSPTLVTYNILISGFSKVGNSSVVSELVRE 348
           RTFN+L++G C    +D  L    K+ L G     VTYN LI GF ++G   V  EL +E
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447

Query: 349 MEDRGISPSKVTYTILMDAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGN 408
           M  R + P  V+Y IL+D    + + EKA E+F  +++  +  D   Y ++IHG+C    
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 507

Query: 409 MVEASKLYKSMVEMHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYIS 461
           + +A  L+ S+    ++P+   YN MI G CK+ +  +A     +M ++G +PN  +Y  
Sbjct: 508 VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNI 567

[Close]
BLAST of IVF0025302 vs. ExPASy Swiss-Prot
Match: Q9SV46 (Pentatricopeptide repeat-containing protein At3g54980, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g54980 PE=1 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.6e-51
Identity = 127/439 (28.93%), Postives = 215/439 (48.97%), Query Frame = 0 

Query: 58  QLEQSLDSFKLMVLKGHSPSSY-------------SFNNNLVVFTEYLGRTQFDVYSFGI 117
           ++E++L+ +K M + G +PS +                  L +F E       +V+    
Sbjct: 389 EMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNT 448

Query: 118 TIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVMFSRMDDLG 177
            +   C+ G   +  ELL++ME+ G+ PNV  Y  ++   C+  ++D A+++FS + + G
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG 508

Query: 178 LAADQYIYTVMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLIT------------ 237
           L  + Y Y+++I+G F+   +++  E+   M    +  N   Y ++I             
Sbjct: 509 LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 568

Query: 238 --------EYWVACNAVTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTTRTFNLLMDG 297
                   E  +  + ++YN +I G  ++G++  A    E M    I+P   T+  LM+G
Sbjct: 569 ELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNG 628

Query: 298 LCNTGKLDKALSYLDKLKLIGQSPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPS 357
           LC   ++D+AL   D++K  G    +  Y  LI GF K  N    S L  E+ + G++PS
Sbjct: 629 LCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPS 688

Query: 358 KVTYTILMDAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGNMVEASKLYK 417
           +  Y  L+  F    ++  A +++  M + GL  D  TY  LI GL   GN++ AS+LY 
Sbjct: 689 QPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYT 748

Query: 418 SMVEMHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDG 464
            M  + L P+++IY  ++NG  K+    K +K  EEM KN VTPNV  Y + I    ++G
Sbjct: 749 EMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREG 808

[Close]
BLAST of IVF0025302 vs. ExPASy TrEMBL
Match: A0A5D3C6B4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001850 PE=4 SV=1)

HSP 1 Score: 908.7 bits (2347), Expect = 1.0e-260
Identity = 468/504 (92.86%), Postives = 469/504 (93.06%), Query Frame = 0 

Query: 1   MVPKSIGFVYPFLSNRITSSFFTISSLLTYSTQRNLNSESVCGRPHDAVINASLQSPQLE 60
           MVPKSIGFVYPFLSNRITSSFFTISSLLTYSTQRNLNSESVCGRPHDAVINASLQSPQLE
Sbjct: 1   MVPKSIGFVYPFLSNRITSSFFTISSLLTYSTQRNLNSESVCGRPHDAVINASLQSPQLE 60

Query: 61  QSLDSFKLMVLKGHSPSSYSFNNNLVV-------------FTEYLGRTQFDVYSFGITIK 120
           QSLDSFKLMVLKGHSPSSYSFNN L +             FTEYLGRTQFDVYSFGITIK
Sbjct: 61  QSLDSFKLMVLKGHSPSSYSFNNVLDLLAKSGNLDRTWWFFTEYLGRTQFDVYSFGITIK 120

Query: 121 AFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVMFSRMDDLGLAA 180
           AFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVMFSRMDDLGLAA
Sbjct: 121 AFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVMFSRMDDLGLAA 180

Query: 181 DQYIYTVMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLITEY------------- 240
           DQYIYTVMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLITEY             
Sbjct: 181 DQYIYTVMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLITEYCRDGKLSLAFKLF 240

Query: 241 ------WVACNAVTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTTRTFNLLMDGLCNT 300
                  VACNAVTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTTRTFNLLMDGLCNT
Sbjct: 241 DEISKRGVACNAVTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTTRTFNLLMDGLCNT 300

Query: 301 GKLDKALSYLDKLKLIGQSPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTY 360
           GKLDKALSYLDKLKLIGQSPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTY
Sbjct: 301 GKLDKALSYLDKLKLIGQSPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTY 360

Query: 361 TILMDAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGNMVEASKLYKSMVE 420
           TILMDAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGNMVEASKLYKSMVE
Sbjct: 361 TILMDAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGNMVEASKLYKSMVE 420

Query: 421 MHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIE 473
           MHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIE
Sbjct: 421 MHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIE 480

[Close]
BLAST of IVF0025302 vs. ExPASy TrEMBL
Match: A0A1S3C0B2 (pentatricopeptide repeat-containing protein At4g11690 OS=Cucumis melo OX=3656 GN=LOC103495373 PE=4 SV=1)

HSP 1 Score: 908.7 bits (2347), Expect = 1.0e-260
Identity = 468/504 (92.86%), Postives = 469/504 (93.06%), Query Frame = 0 

Query: 1   MVPKSIGFVYPFLSNRITSSFFTISSLLTYSTQRNLNSESVCGRPHDAVINASLQSPQLE 60
           MVPKSIGFVYPFLSNRITSSFFTISSLLTYSTQRNLNSESVCGRPHDAVINASLQSPQLE
Sbjct: 1   MVPKSIGFVYPFLSNRITSSFFTISSLLTYSTQRNLNSESVCGRPHDAVINASLQSPQLE 60

Query: 61  QSLDSFKLMVLKGHSPSSYSFNNNLVV-------------FTEYLGRTQFDVYSFGITIK 120
           QSLDSFKLMVLKGHSPSSYSFNN L +             FTEYLGRTQFDVYSFGITIK
Sbjct: 61  QSLDSFKLMVLKGHSPSSYSFNNVLDLLAKSGNLDRTWWFFTEYLGRTQFDVYSFGITIK 120

Query: 121 AFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVMFSRMDDLGLAA 180
           AFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVMFSRMDDLGLAA
Sbjct: 121 AFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVMFSRMDDLGLAA 180

Query: 181 DQYIYTVMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLITEY------------- 240
           DQYIYTVMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLITEY             
Sbjct: 181 DQYIYTVMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLITEYCRDGKLSLAFKLF 240

Query: 241 ------WVACNAVTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTTRTFNLLMDGLCNT 300
                  VACNAVTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTTRTFNLLMDGLCNT
Sbjct: 241 DEISKRGVACNAVTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTTRTFNLLMDGLCNT 300

Query: 301 GKLDKALSYLDKLKLIGQSPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTY 360
           GKLDKALSYLDKLKLIGQSPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTY
Sbjct: 301 GKLDKALSYLDKLKLIGQSPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTY 360

Query: 361 TILMDAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGNMVEASKLYKSMVE 420
           TILMDAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGNMVEASKLYKSMVE
Sbjct: 361 TILMDAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGNMVEASKLYKSMVE 420

Query: 421 MHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIE 473
           MHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIE
Sbjct: 421 MHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIE 480

[Close]
BLAST of IVF0025302 vs. ExPASy TrEMBL
Match: A0A6J1I748 (pentatricopeptide repeat-containing protein At4g11690 OS=Cucurbita maxima OX=3661 GN=LOC111470611 PE=4 SV=1)

HSP 1 Score: 730.7 bits (1885), Expect = 3.8e-207
Identity = 372/504 (73.81%), Postives = 419/504 (83.13%), Query Frame = 0 

Query: 1   MVPKSIGFVYPFLSNRITSSFFTISSLLTYSTQRNLNSESVCGRPHDAVINASLQSPQLE 60
           MVPKSIGF++ FLSNRITSSFFTISS+LTYSTQ NLNS       H+A+INASLQS  LE
Sbjct: 1   MVPKSIGFLHSFLSNRITSSFFTISSILTYSTQPNLNS-------HEAIINASLQSQLLE 60

Query: 61  QSLDSFKLMVLKGHSPSSYSFNNNL-------------VVFTEYLGRTQFDVYSFGITIK 120
           QSL SFKLM+L+GH PSS SFNN L               FTE+LGRT+FD YSFGITIK
Sbjct: 61  QSLHSFKLMILQGHCPSSISFNNVLGLLAKSGDLHKTWCFFTEFLGRTRFDEYSFGITIK 120

Query: 121 AFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVMFSRMDDLGLAA 180
           AFC+NGNVSKGFELLAQME +G+SPNV IYTILI+ACCKNGDI+QAKV+FS+M+DLG  A
Sbjct: 121 AFCKNGNVSKGFELLAQMERIGLSPNVVIYTILIDACCKNGDIEQAKVLFSKMNDLGFVA 180

Query: 181 DQYIYTVMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLITEY------------- 240
           +QY YT MINGFFKKGYKKDGFELYEKMKL+GVLP+LYTYN+LI EY             
Sbjct: 181 NQYTYTAMINGFFKKGYKKDGFELYEKMKLVGVLPSLYTYNTLINEYCRDGKLSIAFKVF 240

Query: 241 ------WVACNAVTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTTRTFNLLMDGLCNT 300
                  V+CN VTY ILIGGLCRK Q+ KAE L ERMK+ HINPTTRT+NLLMDG CN 
Sbjct: 241 DEMSTRGVSCNVVTYTILIGGLCRKRQMSKAERLFERMKQVHINPTTRTYNLLMDGFCNI 300

Query: 301 GKLDKALSYLDKLKLIGQSPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTY 360
           GKL+KAL Y DKLKLIG +PT V+YNILI+GFSK GNS+VVSELVREMEDRGISPSKVTY
Sbjct: 301 GKLEKALGYFDKLKLIGLAPTSVSYNILIAGFSKAGNSAVVSELVREMEDRGISPSKVTY 360

Query: 361 TILMDAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGNMVEASKLYKSMVE 420
           TILMDAFVRSDD+EKA ++FHLMK++G VPDQHTYGVL+HGLC++GNMVEASKLYKSMVE
Sbjct: 361 TILMDAFVRSDDVEKASQLFHLMKKVGSVPDQHTYGVLMHGLCMKGNMVEASKLYKSMVE 420

Query: 421 MHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIE 473
           M++EPNDVIYN MINGYCKECNSYKALKFL+EMV  G+TP++ASY STI+VLC +GKS E
Sbjct: 421 MNVEPNDVIYNIMINGYCKECNSYKALKFLQEMVNKGLTPSLASYSSTIEVLCNEGKSTE 480

[Close]
BLAST of IVF0025302 vs. ExPASy TrEMBL
Match: A0A6J1GM09 (pentatricopeptide repeat-containing protein At4g11690 OS=Cucurbita moschata OX=3662 GN=LOC111455596 PE=4 SV=1)

HSP 1 Score: 710.3 bits (1832), Expect = 5.4e-201
Identity = 363/504 (72.02%), Postives = 414/504 (82.14%), Query Frame = 0 

Query: 1   MVPKSIGFVYPFLSNRITSSFFTISSLLTYSTQRNLNSESVCGRPHDAVINASLQSPQLE 60
           MVPKSI FV+ FLSNRITSSF TISS+LTYSTQ NLNS       H+A+ +ASLQS QLE
Sbjct: 1   MVPKSIAFVHSFLSNRITSSFLTISSILTYSTQPNLNS-------HEAITSASLQSQQLE 60

Query: 61  QSLDSFKLMVLKGHSPSSYSFNNNLVV-------------FTEYLGRTQFDVYSFGITIK 120
           QSL+SFKLM+L+GH PS+ SFNN L +             FTE+LGRT FD YSFGITIK
Sbjct: 61  QSLNSFKLMILQGHCPSAISFNNVLGLLAKSGDLHKTWWFFTEFLGRTHFDEYSFGITIK 120

Query: 121 AFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVMFSRMDDLGLAA 180
           AFC+NGNVSKGFELLAQME +G+SPNV IYTILI+ACCKNGDI+QAKV+FS+M+DLGL A
Sbjct: 121 AFCKNGNVSKGFELLAQMERIGLSPNVVIYTILIDACCKNGDIEQAKVLFSKMNDLGLVA 180

Query: 181 DQYIYTVMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLITEY------------- 240
           +QY YT MINGFFKKGYKKDGFEL+EKMKL+GVLP+LYTYN+LI EY             
Sbjct: 181 NQYTYTAMINGFFKKGYKKDGFELFEKMKLVGVLPSLYTYNTLINEYCRDGKLSIAFKVF 240

Query: 241 ------WVACNAVTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTTRTFNLLMDGLCNT 300
                  V+CN VTY ILIGGLCRK Q+ KAE L ERMK+  INPTTRT+NLLMDG CN 
Sbjct: 241 DEMSTSGVSCNVVTYTILIGGLCRKRQLTKAERLFERMKQVRINPTTRTYNLLMDGFCNI 300

Query: 301 GKLDKALSYLDKLKLIGQSPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTY 360
           GKL+KAL Y D+LKLIG +PT V+YNILI+GFSK GNSSVVSELVREMEDRG+SPSKVTY
Sbjct: 301 GKLEKALGYFDELKLIGLAPTSVSYNILIAGFSKAGNSSVVSELVREMEDRGVSPSKVTY 360

Query: 361 TILMDAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGNMVEASKLYKSMVE 420
           TILMDAFVRSDD+EKA ++FHLMK++G VPDQHTYGVL+HGLC++GNMVEASKLY SMVE
Sbjct: 361 TILMDAFVRSDDVEKASQLFHLMKKVGSVPDQHTYGVLMHGLCMKGNMVEASKLYNSMVE 420

Query: 421 MHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIE 473
           M++EPNDVIYN MINGYCKECNSYKALKFL+EMV  G+TP++ SY STI+VL  +GKS E
Sbjct: 421 MNVEPNDVIYNIMINGYCKECNSYKALKFLQEMVNKGLTPSLTSYKSTIEVLYNEGKSTE 480

[Close]
BLAST of IVF0025302 vs. ExPASy TrEMBL
Match: A0A6J1C8X2 (pentatricopeptide repeat-containing protein At4g11690 OS=Momordica charantia OX=3673 GN=LOC111008514 PE=4 SV=1)

HSP 1 Score: 700.3 bits (1806), Expect = 5.6e-198
Identity = 365/520 (70.19%), Postives = 408/520 (78.46%), Query Frame = 0 

Query: 1   MVPKSIGFVYPF----------------LSNRITSSFFTISSLLTYSTQRNLNSESVCGR 60
           MVPK  GFV+ F                LSNRI S FFTISS+LT+ST+ NLN+  +CG 
Sbjct: 1   MVPKFTGFVHHFLASDMRPQVHSIPVQVLSNRIFSHFFTISSILTHSTRSNLNNYPLCGC 60

Query: 61  PHDAVINASLQSPQLEQSLDSFKLMVLKGHSPSSYSFNNNL-------------VVFTEY 120
           PH+A+I+A +QS   EQSL+ FKLMVLKG  PSS SFNN L               F E+
Sbjct: 61  PHEAIISAHVQSQLPEQSLNHFKLMVLKGLCPSSNSFNNVLGLLTKSGDLNKAWCFFNEF 120

Query: 121 LGRTQFDVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDID 180
           LGRT FDVYSFGI IKAFCE GNVSKGFELLAQME MG+SPNV IYTILI+ACCKNGDI+
Sbjct: 121 LGRTHFDVYSFGIMIKAFCEGGNVSKGFELLAQMERMGLSPNVVIYTILIDACCKNGDIE 180

Query: 181 QAKVMFSRMDDLGLAADQYIYTVMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLI 240
           QAKV+FS+M DLGL A+QY YTVMING FKKG KKDGFELYEKM L+GV P++YTYNSLI
Sbjct: 181 QAKVLFSKMGDLGLVANQYTYTVMINGLFKKGCKKDGFELYEKMNLIGVFPSVYTYNSLI 240

Query: 241 TEY-------------------WVACNAVTYNILIGGLCRKGQVLKAEGLLERMKRAHIN 300
            EY                    V+CN VTYNILIGGLCR  QVLKAE LLE+MK AHIN
Sbjct: 241 NEYCRDGTLCLAFKLFDEMRTRGVSCNVVTYNILIGGLCRNRQVLKAEWLLEQMKLAHIN 300

Query: 301 PTTRTFNLLMDGLCNTGKLDKALSYLDKLKLIGQSPTLVTYNILISGFSKVGNSSVVSEL 360
           P+T TFNLLMDG CN GK DKALSY D+LKLIG SPT VTYNILI+GFSK GNS+VV EL
Sbjct: 301 PSTITFNLLMDGFCNVGKFDKALSYFDELKLIGLSPTSVTYNILIAGFSKAGNSAVVCEL 360

Query: 361 VREMEDRGISPSKVTYTILMDAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCI 420
           VREMEDRGISPSKVTYTILMDAFVRSDD+ KA +MFHLMK++G VPDQ+TYGVL+HGLC+
Sbjct: 361 VREMEDRGISPSKVTYTILMDAFVRSDDVGKASQMFHLMKKVGSVPDQYTYGVLMHGLCM 420

Query: 421 RGNMVEASKLYKSMVEMHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVAS 473
           +GNMVEASKLYKSM+E HL+PNDVIYNTMINGYCKECNSYKALKFL+EMV+ G+TP+ AS
Sbjct: 421 KGNMVEASKLYKSMIETHLQPNDVIYNTMINGYCKECNSYKALKFLQEMVRKGMTPSQAS 480

[Close]
BLAST of IVF0025302 vs. NCBI nr
Match: XP_008455127.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g11690 [Cucumis melo] >KAA0031429.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK06880.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 908 bits (2346), Expect = 0.0
Identity = 468/504 (92.86%), Postives = 469/504 (93.06%), Query Frame = 0 

Query: 1   MVPKSIGFVYPFLSNRITSSFFTISSLLTYSTQRNLNSESVCGRPHDAVINASLQSPQLE 60
           MVPKSIGFVYPFLSNRITSSFFTISSLLTYSTQRNLNSESVCGRPHDAVINASLQSPQLE
Sbjct: 1   MVPKSIGFVYPFLSNRITSSFFTISSLLTYSTQRNLNSESVCGRPHDAVINASLQSPQLE 60

Query: 61  QSLDSFKLMVLKGHSPSSYSFNNNLVV-------------FTEYLGRTQFDVYSFGITIK 120
           QSLDSFKLMVLKGHSPSSYSFNN L +             FTEYLGRTQFDVYSFGITIK
Sbjct: 61  QSLDSFKLMVLKGHSPSSYSFNNVLDLLAKSGNLDRTWWFFTEYLGRTQFDVYSFGITIK 120

Query: 121 AFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVMFSRMDDLGLAA 180
           AFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVMFSRMDDLGLAA
Sbjct: 121 AFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVMFSRMDDLGLAA 180

Query: 181 DQYIYTVMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLITEYW------------ 240
           DQYIYTVMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLITEY             
Sbjct: 181 DQYIYTVMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLITEYCRDGKLSLAFKLF 240

Query: 241 -------VACNAVTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTTRTFNLLMDGLCNT 300
                  VACNAVTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTTRTFNLLMDGLCNT
Sbjct: 241 DEISKRGVACNAVTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTTRTFNLLMDGLCNT 300

Query: 301 GKLDKALSYLDKLKLIGQSPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTY 360
           GKLDKALSYLDKLKLIGQSPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTY
Sbjct: 301 GKLDKALSYLDKLKLIGQSPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTY 360

Query: 361 TILMDAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGNMVEASKLYKSMVE 420
           TILMDAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGNMVEASKLYKSMVE
Sbjct: 361 TILMDAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGNMVEASKLYKSMVE 420

Query: 421 MHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIE 472
           MHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIE
Sbjct: 421 MHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIE 480

[Close]
BLAST of IVF0025302 vs. NCBI nr
Match: XP_004137069.1 (pentatricopeptide repeat-containing protein At4g11690 [Cucumis sativus] >KGN43842.2 hypothetical protein Csa_017240 [Cucumis sativus])

HSP 1 Score: 852 bits (2202), Expect = 7.32e-310
Identity = 440/504 (87.30%), Postives = 454/504 (90.08%), Query Frame = 0 

Query: 1   MVPKSIGFVYPFLSNRITSSFFTISSLLTYSTQRNLNSESVCGRPHDAVINASLQSPQLE 60
           MVPKSIGFVYPFLSNRITS FFTISS     TQRNLNSESVCGRP DAVINAS QS  LE
Sbjct: 1   MVPKSIGFVYPFLSNRITSYFFTISS-----TQRNLNSESVCGRPRDAVINASFQSQLLE 60

Query: 61  QSLDSFKLMVLKGHSPSSYSFNNNLVV-------------FTEYLGRTQFDVYSFGITIK 120
           QSLDSFKLMVLKGHSPSS+SFNN L +             FTEYLGRTQFDVYSFGITIK
Sbjct: 61  QSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQFDVYSFGITIK 120

Query: 121 AFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVMFSRMDDLGLAA 180
           AFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACC+NGDIDQAKVMFSRMDDLGLAA
Sbjct: 121 AFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAA 180

Query: 181 DQYIYTVMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLITEYW------------ 240
           +QYIYT+MINGFFKKGYKKDGFELY+KMKL+GVLPNLYTYNSLITEY             
Sbjct: 181 NQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVF 240

Query: 241 -------VACNAVTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTTRTFNLLMDGLCNT 300
                  VACNAVTYNILIGGLCRKGQV KAEGLLERMKRAHINPTTRTFN+LMDGLCNT
Sbjct: 241 DEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNT 300

Query: 301 GKLDKALSYLDKLKLIGQSPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTY 360
           G+LDKALSYL+KLKLIG  PTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTY
Sbjct: 301 GQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTY 360

Query: 361 TILMDAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGNMVEASKLYKSMVE 420
           TILM+ FVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCI+GNMVEASKLYKSMVE
Sbjct: 361 TILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVE 420

Query: 421 MHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIE 472
           MHL+PNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQ+LCKDGKSIE
Sbjct: 421 MHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIE 480

[Close]
BLAST of IVF0025302 vs. NCBI nr
Match: XP_038887006.1 (pentatricopeptide repeat-containing protein At4g11690 [Benincasa hispida])

HSP 1 Score: 762 bits (1968), Expect = 3.02e-274
Identity = 395/504 (78.37%), Postives = 424/504 (84.13%), Query Frame = 0 

Query: 1   MVPKSIGFVYPFLSNRITSSFFTISSLLTYSTQRNLNSESVCGRPHDAVINASLQSPQLE 60
           MV KSIGFV PFL NRITSSFFT SS+LTYSTQ NLN +S CG  H A+INASLQS  LE
Sbjct: 1   MVSKSIGFVNPFLPNRITSSFFTNSSILTYSTQPNLNYDSACGFSHYAIINASLQSQPLE 60

Query: 61  QSLDSFKLMVLKGHSPSSYSFNNNLV-------------VFTEYLGRTQFDVYSFGITIK 120
           QSL +FKLMVLKG+ PSS SFNN L               F+E+L RTQFDVYSFGITIK
Sbjct: 61  QSLHNFKLMVLKGYCPSSSSFNNVLGQLAKSGNLHRTWWFFSEFLERTQFDVYSFGITIK 120

Query: 121 AFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVMFSRMDDLGLAA 180
           AFCENGN+SKGF+LLAQME MG+S NV IYTILI+ACCKNGDI+QAKV+FSRMDDLGL A
Sbjct: 121 AFCENGNISKGFDLLAQMERMGLSANVVIYTILIDACCKNGDIEQAKVLFSRMDDLGLVA 180

Query: 181 DQYIYTVMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLITEYW------------ 240
           + Y YTVMINGFFKKGY+KDGFELYEKMKL+GVLP LYTYNSLI EY             
Sbjct: 181 NHYTYTVMINGFFKKGYQKDGFELYEKMKLVGVLPTLYTYNSLINEYCRDGKLSLAFKLF 240

Query: 241 -------VACNAVTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTTRTFNLLMDGLCNT 300
                  V+CN +TYNILIGGLCRK QV KAE LLE+MK+AHINPTTRTFNLL+DGLCNT
Sbjct: 241 DEMSTRGVSCNVITYNILIGGLCRKRQVSKAEWLLEQMKQAHINPTTRTFNLLIDGLCNT 300

Query: 301 GKLDKALSYLDKLKLIGQSPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTY 360
           GKLDKALSY DK+KLIGQSPT VTYNILI+GFSKVGNSSVVSELVREMEDRGISPSKVTY
Sbjct: 301 GKLDKALSYFDKMKLIGQSPTSVTYNILIAGFSKVGNSSVVSELVREMEDRGISPSKVTY 360

Query: 361 TILMDAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGNMVEASKLYKSMVE 420
           TILM AFVRSDD+EKAYEMF LMK+IG VPDQHTYGVLIHGLC++GNMVEASKLYKSMVE
Sbjct: 361 TILMHAFVRSDDVEKAYEMFRLMKKIGSVPDQHTYGVLIHGLCMKGNMVEASKLYKSMVE 420

Query: 421 MHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIE 472
           MHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVK GVTP+VASY  TI VLC +GKS E
Sbjct: 421 MHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKKGVTPSVASYSFTIAVLCNEGKSTE 480

[Close]
BLAST of IVF0025302 vs. NCBI nr
Match: XP_022971940.1 (pentatricopeptide repeat-containing protein At4g11690 [Cucurbita maxima])

HSP 1 Score: 730 bits (1885), Expect = 1.00e-261
Identity = 372/504 (73.81%), Postives = 420/504 (83.33%), Query Frame = 0 

Query: 1   MVPKSIGFVYPFLSNRITSSFFTISSLLTYSTQRNLNSESVCGRPHDAVINASLQSPQLE 60
           MVPKSIGF++ FLSNRITSSFFTISS+LTYSTQ NLNS       H+A+INASLQS  LE
Sbjct: 1   MVPKSIGFLHSFLSNRITSSFFTISSILTYSTQPNLNS-------HEAIINASLQSQLLE 60

Query: 61  QSLDSFKLMVLKGHSPSSYSFNNNLVV-------------FTEYLGRTQFDVYSFGITIK 120
           QSL SFKLM+L+GH PSS SFNN L +             FTE+LGRT+FD YSFGITIK
Sbjct: 61  QSLHSFKLMILQGHCPSSISFNNVLGLLAKSGDLHKTWCFFTEFLGRTRFDEYSFGITIK 120

Query: 121 AFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVMFSRMDDLGLAA 180
           AFC+NGNVSKGFELLAQME +G+SPNV IYTILI+ACCKNGDI+QAKV+FS+M+DLG  A
Sbjct: 121 AFCKNGNVSKGFELLAQMERIGLSPNVVIYTILIDACCKNGDIEQAKVLFSKMNDLGFVA 180

Query: 181 DQYIYTVMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLITEYW------------ 240
           +QY YT MINGFFKKGYKKDGFELYEKMKL+GVLP+LYTYN+LI EY             
Sbjct: 181 NQYTYTAMINGFFKKGYKKDGFELYEKMKLVGVLPSLYTYNTLINEYCRDGKLSIAFKVF 240

Query: 241 -------VACNAVTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTTRTFNLLMDGLCNT 300
                  V+CN VTY ILIGGLCRK Q+ KAE L ERMK+ HINPTTRT+NLLMDG CN 
Sbjct: 241 DEMSTRGVSCNVVTYTILIGGLCRKRQMSKAERLFERMKQVHINPTTRTYNLLMDGFCNI 300

Query: 301 GKLDKALSYLDKLKLIGQSPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTY 360
           GKL+KAL Y DKLKLIG +PT V+YNILI+GFSK GNS+VVSELVREMEDRGISPSKVTY
Sbjct: 301 GKLEKALGYFDKLKLIGLAPTSVSYNILIAGFSKAGNSAVVSELVREMEDRGISPSKVTY 360

Query: 361 TILMDAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGNMVEASKLYKSMVE 420
           TILMDAFVRSDD+EKA ++FHLMK++G VPDQHTYGVL+HGLC++GNMVEASKLYKSMVE
Sbjct: 361 TILMDAFVRSDDVEKASQLFHLMKKVGSVPDQHTYGVLMHGLCMKGNMVEASKLYKSMVE 420

Query: 421 MHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIE 472
           M++EPNDVIYN MINGYCKECNSYKALKFL+EMV  G+TP++ASY STI+VLC +GKS E
Sbjct: 421 MNVEPNDVIYNIMINGYCKECNSYKALKFLQEMVNKGLTPSLASYSSTIEVLCNEGKSTE 480

[Close]
BLAST of IVF0025302 vs. NCBI nr
Match: KAG6571877.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 711 bits (1834), Expect = 5.75e-254
Identity = 363/504 (72.02%), Postives = 414/504 (82.14%), Query Frame = 0 

Query: 1   MVPKSIGFVYPFLSNRITSSFFTISSLLTYSTQRNLNSESVCGRPHDAVINASLQSPQLE 60
           MVPKSI FV+ FLSNRITSSF TISS+LTYSTQ NLNS       H+A+ +ASLQS QLE
Sbjct: 1   MVPKSIAFVHSFLSNRITSSFLTISSILTYSTQPNLNS-------HEAITSASLQSQQLE 60

Query: 61  QSLDSFKLMVLKGHSPSSYSFNNNLVV-------------FTEYLGRTQFDVYSFGITIK 120
           QSL+SFKLM+L+GH PSS SFNN L +             FTE+LGRT FD YSFGITIK
Sbjct: 61  QSLNSFKLMILQGHCPSSISFNNVLGLLAKSGDLHKTWWFFTEFLGRTHFDEYSFGITIK 120

Query: 121 AFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVMFSRMDDLGLAA 180
           AFC+NGNVSKGFELLAQME +G+SPNV IYTILI+ACCKNGDI+QAKV+FS+M+DLGL  
Sbjct: 121 AFCKNGNVSKGFELLAQMERIGLSPNVVIYTILIDACCKNGDIEQAKVLFSKMNDLGLVV 180

Query: 181 DQYIYTVMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLITEYW------------ 240
           +QY YT MINGFFKKGYKKDGFEL+EKMKL+GVLP+LYTYN+LI EY             
Sbjct: 181 NQYTYTAMINGFFKKGYKKDGFELFEKMKLVGVLPSLYTYNTLINEYCRDGKLSIAFKVF 240

Query: 241 -------VACNAVTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTTRTFNLLMDGLCNT 300
                  V+CN VTY ILIGGLCRK Q+ KAE L ERMK+  INPTTRT+NLLMDG CN 
Sbjct: 241 DEMSTSGVSCNVVTYTILIGGLCRKRQLSKAERLFERMKQVRINPTTRTYNLLMDGFCNI 300

Query: 301 GKLDKALSYLDKLKLIGQSPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTY 360
           GKL+KAL Y D+LKLIG +PT V+YNILI+GFSK GNSSVVSELVREMEDRG+SPSKVTY
Sbjct: 301 GKLEKALGYFDELKLIGLAPTSVSYNILIAGFSKAGNSSVVSELVREMEDRGVSPSKVTY 360

Query: 361 TILMDAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGNMVEASKLYKSMVE 420
           TILMDAFVRSDD+EKA ++FHLMK++G VPDQHTYGVL+HGLC++GNMV+ASKLY SMVE
Sbjct: 361 TILMDAFVRSDDVEKASQLFHLMKKVGSVPDQHTYGVLMHGLCMKGNMVKASKLYNSMVE 420

Query: 421 MHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIE 472
           M++EPNDVIYN MINGYCKECNSYKALKFL+EMV  G+TP++ SY STI+VL  +GKS E
Sbjct: 421 MNVEPNDVIYNIMINGYCKECNSYKALKFLQEMVNKGLTPSLTSYKSTIEVLYNEGKSTE 480

[Close]
BLAST of IVF0025302 vs. TAIR 10
Match: AT4G11690.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 451.1 bits (1159), Expect = 1.1e-126
Identity = 243/491 (49.49%), Postives = 319/491 (64.97%), Query Frame = 0 

Query: 13  LSNRITSSFFTISSLLTYSTQRNLNSESVCGRPHDAVINASLQSPQLEQSLDSFKLMVLK 72
           +S +I S FFT SSLL Y T+   +      R ++ +IN+ +QS  L  S+  F  MV  
Sbjct: 66  ISGKIHSQFFTSSSLLHYLTESETSKTKF--RLYEVIINSYVQSQSLNLSISYFNEMVDN 125

Query: 73  GHSPSSYSFNNNLV-------------VFTEYLGRTQFDVYSFGITIKAFCENGNVSKGF 132
           G  P S  FN  L               F E   +   DVYSFGI IK  CE G + K F
Sbjct: 126 GFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSF 185

Query: 133 ELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVMFSRMDDLGLAADQYIYTVMINGF 192
           +LL ++   G SPNV IYT LI+ CCK G+I++AK +F  M  LGL A++  YTV+ING 
Sbjct: 186 DLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGL 245

Query: 193 FKKGYKKDGFELYEKMKLMGVLPNLYTYNSLIT-------------------EYWVACNA 252
           FK G KK GFE+YEKM+  GV PNLYTYN ++                    E  V+CN 
Sbjct: 246 FKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNI 305

Query: 253 VTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTTRTFNLLMDGLCNTGKLDKALSYLDK 312
           VTYN LIGGLCR+ ++ +A  ++++MK   INP   T+N L+DG C  GKL KALS    
Sbjct: 306 VTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRD 365

Query: 313 LKLIGQSPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMDAFVRSDD 372
           LK  G SP+LVTYNIL+SGF + G++S  +++V+EME+RGI PSKVTYTIL+D F RSD+
Sbjct: 366 LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDN 425

Query: 373 IEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGNMVEASKLYKSMVEMHLEPNDVIYNT 432
           +EKA ++   M+ +GLVPD HTY VLIHG CI+G M EAS+L+KSMVE + EPN+VIYNT
Sbjct: 426 MEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT 485

Query: 433 MINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIEAKRLLKEMTEAG 472
           MI GYCKE +SY+ALK L+EM +  + PNVASY   I+VLCK+ KS EA+RL+++M ++G
Sbjct: 486 MILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSG 545

[Close]
BLAST of IVF0025302 vs. TAIR 10
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 215.3 bits (547), Expect = 1.0e-55
Identity = 120/394 (30.46%), Postives = 197/394 (50.00%), Query Frame = 0 

Query: 98  DVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVMF 157
           DV ++   +++ C++G + +  E+L +M      P+V  YTILIEA C++  +  A  + 
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 262

Query: 158 SRMDDLGLAADQYIYTVMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLI-----T 217
             M D G   D   Y V++NG  K+G   +  +    M   G  PN+ T+N ++     T
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322

Query: 218 EYWV--------------ACNAVTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTTRTF 277
             W+              + + VT+NILI  LCRKG + +A  +LE+M +    P + ++
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382

Query: 278 NLLMDGLCNTGKLDKALSYLDKLKLIGQSPTLVTYNILISGFSKVGNSSVVSELVREMED 337
           N L+ G C   K+D+A+ YL+++   G  P +VTYN +++   K G      E++ ++  
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442

Query: 338 RGISPSKVTYTILMDAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGNMVE 397
           +G SP  +TY  ++D   ++    KA ++   M+   L PD  TY  L+ GL   G + E
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502

Query: 398 ASKLYKSMVEMHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQ 457
           A K +     M + PN V +N+++ G CK   + +A+ FL  M+  G  PN  SY   I+
Sbjct: 503 AIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIE 562

Query: 458 VLCKDGKSIEAKRLLKEMTEAGLKPPESLRSKVG 473
            L  +G + EA  LL E+   GL    S     G
Sbjct: 563 GLAYEGMAKEALELLNELCNKGLMKKSSAEQVAG 596

[Close]
BLAST of IVF0025302 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 209.5 bits (532), Expect = 5.7e-54
Identity = 118/352 (33.52%), Postives = 184/352 (52.27%), Query Frame = 0 

Query: 114 NVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVMFSRMDDLGLAADQYIYT 173
           N+S    +  +M    VSPNVF Y ILI   C  G+ID A  +F +M+  G   +   Y 
Sbjct: 185 NISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYN 244

Query: 174 VMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLITEYWVACNAVTYNILIGGLCRK 233
            +I+G+ K     DGF+L   M L G+ PNL                ++YN++I GLCR+
Sbjct: 245 TLIDGYCKLRKIDDGFKLLRSMALKGLEPNL----------------ISYNVVINGLCRE 304

Query: 234 GQVLKAEGLLERMKRAHINPTTRTFNLLMDGLCNTGKLDKALSYLDKLKLIGQSPTLVTY 293
           G++ +   +L  M R   +    T+N L+ G C  G   +AL    ++   G +P+++TY
Sbjct: 305 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 364

Query: 294 NILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMDAFVRSDDIEKAYEMFHLMKR 353
             LI    K GN +   E + +M  RG+ P++ TYT L+D F +   + +AY +   M  
Sbjct: 365 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 424

Query: 354 IGLVPDQHTYGVLIHGLCIRGNMVEASKLYKSMVEMHLEPNDVIYNTMINGYCKECNSYK 413
            G  P   TY  LI+G C+ G M +A  + + M E  L P+ V Y+T+++G+C+  +  +
Sbjct: 425 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDE 484

Query: 414 ALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIEAKRLLKEMTEAGLKPPE 466
           AL+   EMV+ G+ P+  +Y S IQ  C+  ++ EA  L +EM   GL P E
Sbjct: 485 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE 520

[Close]
BLAST of IVF0025302 vs. TAIR 10
Match: AT1G12620.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 206.5 bits (524), Expect = 4.9e-53
Identity = 127/445 (28.54%), Postives = 220/445 (49.44%), Query Frame = 0 

Query: 49  VINASLQSPQLEQSLDSFKLMVLKGHSPSSYSFN------------NNLVVFTEYLGRTQ 108
           +IN      ++ ++L+    MV  GH P+  + N            ++ V+  + +  T 
Sbjct: 148 LINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETG 207

Query: 109 F--DVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAK 168
           F  +  ++G  +K  C++G  +   ELL +ME   +  +   Y+I+I+  CK+G +D A 
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267

Query: 169 VMFSRMDDLGLAADQYIYTVMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLI--- 228
            +F+ M+  G  AD  IYT +I GF   G   DG +L   M    + P++  +++LI   
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327

Query: 229 ----------------TEYWVACNAVTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTT 288
                            +  ++ + VTY  LI G C++ Q+ KA  +L+ M      P  
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387

Query: 289 RTFNLLMDGLCNTGKLDKALSYLDKLKLIGQSPTLVTYNILISGFSKVGNSSVVSELVRE 348
           RTFN+L++G C    +D  L    K+ L G     VTYN LI GF ++G   V  EL +E
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447

Query: 349 MEDRGISPSKVTYTILMDAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGN 408
           M  R + P  V+Y IL+D    + + EKA E+F  +++  +  D   Y ++IHG+C    
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 507

Query: 409 MVEASKLYKSMVEMHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYIS 461
           + +A  L+ S+    ++P+   YN MI G CK+ +  +A     +M ++G +PN  +Y  
Sbjct: 508 VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNI 567

[Close]
BLAST of IVF0025302 vs. TAIR 10
Match: AT3G54980.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 204.5 bits (519), Expect = 1.8e-52
Identity = 127/439 (28.93%), Postives = 215/439 (48.97%), Query Frame = 0 

Query: 58  QLEQSLDSFKLMVLKGHSPSSY-------------SFNNNLVVFTEYLGRTQFDVYSFGI 117
           ++E++L+ +K M + G +PS +                  L +F E       +V+    
Sbjct: 389 EMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNT 448

Query: 118 TIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVMFSRMDDLG 177
            +   C+ G   +  ELL++ME+ G+ PNV  Y  ++   C+  ++D A+++FS + + G
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG 508

Query: 178 LAADQYIYTVMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLIT------------ 237
           L  + Y Y+++I+G F+   +++  E+   M    +  N   Y ++I             
Sbjct: 509 LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 568

Query: 238 --------EYWVACNAVTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTTRTFNLLMDG 297
                   E  +  + ++YN +I G  ++G++  A    E M    I+P   T+  LM+G
Sbjct: 569 ELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNG 628

Query: 298 LCNTGKLDKALSYLDKLKLIGQSPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPS 357
           LC   ++D+AL   D++K  G    +  Y  LI GF K  N    S L  E+ + G++PS
Sbjct: 629 LCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPS 688

Query: 358 KVTYTILMDAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGNMVEASKLYK 417
           +  Y  L+  F    ++  A +++  M + GL  D  TY  LI GL   GN++ AS+LY 
Sbjct: 689 QPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYT 748

Query: 418 SMVEMHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDG 464
            M  + L P+++IY  ++NG  K+    K +K  EEM KN VTPNV  Y + I    ++G
Sbjct: 749 EMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREG 808

The following BLAST results are available for this feature:
BLAST of IVF0025302 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9T0D61.6e-12549.49Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana OX... [more]
Q3EDF81.5e-5430.46Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... [more]
Q9FIX38.1e-5333.52Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... [more]
Q9ASZ86.8e-5228.54Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX... [more]
Q9SV462.6e-5128.93Pentatricopeptide repeat-containing protein At3g54980, mitochondrial OS=Arabidop... [more]
BLAST of IVF0025302 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3C6B41.0e-26092.86Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3C0B21.0e-26092.86pentatricopeptide repeat-containing protein At4g11690 OS=Cucumis melo OX=3656 GN... [more]
A0A6J1I7483.8e-20773.81pentatricopeptide repeat-containing protein At4g11690 OS=Cucurbita maxima OX=366... [more]
A0A6J1GM095.4e-20172.02pentatricopeptide repeat-containing protein At4g11690 OS=Cucurbita moschata OX=3... [more]
A0A6J1C8X25.6e-19870.19pentatricopeptide repeat-containing protein At4g11690 OS=Momordica charantia OX=... [more]
BLAST of IVF0025302 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008455127.10.092.86PREDICTED: pentatricopeptide repeat-containing protein At4g11690 [Cucumis melo] ... [more]
XP_004137069.17.32e-31087.30pentatricopeptide repeat-containing protein At4g11690 [Cucumis sativus] >KGN4384... [more]
XP_038887006.13.02e-27478.37pentatricopeptide repeat-containing protein At4g11690 [Benincasa hispida][more]
XP_022971940.11.00e-26173.81pentatricopeptide repeat-containing protein At4g11690 [Cucurbita maxima][more]
KAG6571877.15.75e-25472.02Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
BLAST of IVF0025302 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G11690.11.1e-12649.49Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT1G09900.11.0e-5530.46Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT5G39710.15.7e-5433.52Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G12620.14.9e-5328.54Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G54980.11.8e-5228.93Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 101..130
e-value: 0.0043
score: 17.2
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 437..463
e-value: 0.0016
score: 16.5
coord: 102..134
e-value: 9.0E-6
score: 23.6
coord: 291..324
e-value: 6.2E-8
score: 30.3
coord: 136..168
e-value: 1.6E-7
score: 29.1
coord: 361..394
e-value: 2.0E-7
score: 28.8
coord: 257..281
e-value: 6.1E-5
score: 20.9
coord: 326..359
e-value: 9.8E-9
score: 32.9
coord: 396..430
e-value: 1.0E-10
score: 39.1
coord: 170..203
e-value: 6.1E-6
score: 24.1
coord: 221..254
e-value: 9.9E-9
score: 32.9
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 288..336
e-value: 5.1E-14
score: 52.2
coord: 393..442
e-value: 7.0E-15
score: 55.0
coord: 219..267
e-value: 1.3E-14
score: 54.1
coord: 132..181
e-value: 6.3E-12
score: 45.5
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 355..387
e-value: 1.0E-7
score: 31.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 324..358
score: 11.969797
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 429..463
score: 11.114816
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 359..393
score: 11.32308
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 219..253
score: 12.605553
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 394..428
score: 12.726127
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 98..132
score: 11.169622
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 168..202
score: 11.169622
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 133..167
score: 11.608074
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 254..288
score: 10.632519
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 289..323
score: 11.728648
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 216..284
e-value: 2.3E-18
score: 68.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 377..469
e-value: 2.8E-23
score: 84.2
coord: 285..376
e-value: 3.1E-27
score: 97.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 161..215
e-value: 1.4E-11
score: 46.2
coord: 83..160
e-value: 1.5E-18
score: 69.0
NoneNo IPR availablePANTHERPTHR47942:SF34PPR CONTAINING PLANT-LIKE PROTEINcoord: 7..468
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 7..468
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 337..462

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0025302.2IVF0025302.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032544 plastid translation
biological_process GO:0043489 RNA stabilization
cellular_component GO:0009536 plastid
molecular_function GO:0003729 mRNA binding
molecular_function GO:0005515 protein binding