IVF0025291 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAGTTGGAAGATACATTGTGGATGAAAAGAAGAACAAGGCTGTGAAGGAAGACCTGTGTGGTCAAAGTCCTAGTAGCATGCAGGGTGGGGAACATCGCAGTGAGAATAGGCGTTATGCACTAAGCGTTCAACAACAAGGAAATCTTGAAGCTCGTTCTCATGTTCGCCATCCAAGTTTAGAATGA ATGAGAGTTGGAAGATACATTGTGGATGAAAAGAAGAACAAGGCTGTGAAGGAAGACCTGTGTGGTCAAAGTCCTAGTAGCATGCAGGGTGGGGAACATCGCAGTGAGAATAGGCGTTATGCACTAAGCGTTCAACAACAAGGAAATCTTGAAGCTCGTTCTCATGTTCGCCATCCAAGTTTAGAATGA ATGAGAGTTGGAAGATACATTGTGGATGAAAAGAAGAACAAGGCTGTGAAGGAAGACCTGTGTGGTCAAAGTCCTAGTAGCATGCAGGGTGGGGAACATCGCAGTGAGAATAGGCGTTATGCACTAAGCGTTCAACAACAAGGAAATCTTGAAGCTCGTTCTCATGTTCGCCATCCAAGTTTAGAATGA MRVGRYIVDEKKNKAVKEDLCGQSPSSMQGGEHRSENRRYALSVQQQGNLEARSHVRHPSLE Homology
BLAST of IVF0025291 vs. ExPASy TrEMBL
Match: A0A5D3CS54 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1275G00380 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 4.4e-10 Identity = 35/56 (62.50%), Postives = 43/56 (76.79%), Query Frame = 0
BLAST of IVF0025291 vs. NCBI nr
Match: TYK14641.1 (hypothetical protein E5676_scaffold1275G00380 [Cucumis melo var. makuwa]) HSP 1 Score: 73.2 bits (178), Expect = 5.86e-14 Identity = 35/56 (62.50%), Postives = 43/56 (76.79%), Query Frame = 0
BLAST of IVF0025291 vs. NCBI nr
Match: TYK21986.1 (RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 52.0 bits (123), Expect = 2.96e-06 Identity = 25/40 (62.50%), Postives = 30/40 (75.00%), Query Frame = 0
BLAST of IVF0025291 vs. NCBI nr
Match: KAA0047667.1 (Retrotransposon gag protein [Cucumis melo var. makuwa] >TYK08322.1 Retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 52.0 bits (123), Expect = 1.07e-05 Identity = 30/55 (54.55%), Postives = 36/55 (65.45%), Query Frame = 0
BLAST of IVF0025291 vs. NCBI nr
Match: KAA0045437.1 (hypothetical protein E6C27_scaffold294G00360 [Cucumis melo var. makuwa]) HSP 1 Score: 46.2 bits (108), Expect = 3.76e-04 Identity = 25/44 (56.82%), Postives = 29/44 (65.91%), Query Frame = 0
BLAST of IVF0025291 vs. NCBI nr
Match: TYK19798.1 (hypothetical protein E5676_scaffold307G00270 [Cucumis melo var. makuwa]) HSP 1 Score: 46.2 bits (108), Expect = 4.59e-04 Identity = 25/44 (56.82%), Postives = 29/44 (65.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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