Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCCAAAAGTTATCATGTGCCTGAGAATGAAGAGGCTGCTGCTGGAAGTGCTACAAAAGGTGTTGAAAATGCACCCAGTGTCTCTTTTCAGATATGGATTAGGACGAGCAAGATGATATTTCACTGGCTAGACTATTGAAGAAAGGTTTTGATTCTAATGTCGCTCTTGAAAAATCTGTCGATCCTATCATATTAGCTCGTTCTCAGGAAATTTCTCGTTTTGAAGATGTGTTTGTTCCTATACCTGGTCTTCATCATGCATCCAATGAAGAACCTGGTCCATCACGTCACTCACCACCGATTAGGTCATCGGTTCCAGATGATGTTCTTACTCCTAATCTGCATTTAGAACCTGCACCTGTTCCTGTTGATGAATTTATTACGACTGATGGAAGGACTTATGTTTCTGCTGATAAGACCCCTGATGATGAAAATGTTGAACTTGCTAATACTGGTACAACCAATAGCGTTAAACTAGATGTTAATAATGATTTTCAACCTGAGACTCAACAATCCCCTGAAGTATCTAGGCCAACGGGGAAGAAATTTCAGTAG
mRNA sequence
ATGCCTCCAAAAGTTATCATGTGCCTGAGAATGAAGAGGCTGCTGCTGGAAGTGCTACAAAAGGACGAGCAAGATGATATTTCACTGGCTAGACTATTGAAGAAAGGTTTTGATTCTAATGTCGCTCTTGAAAAATCTGTCGATCCTATCATATTAGCTCGTTCTCAGGAAATTTCTCGTTTTGAAGATGTGTTTGTTCCTATACCTGGTCTTCATCATGCATCCAATGAAGAACCTGGTCCATCACGTCACTCACCACCGATTAGGTCATCGGTTCCAGATGATGTTCTTACTCCTAATCTGCATTTAGAACCTGCACCTGTTCCTGTTGATGAATTTATTACGACTGATGGAAGGACTTATGTTTCTGCTGATAAGACCCCTGATGATGAAAATGTTGAACTTGCTAATACTGGTACAACCAATAGCGTTAAACTAGATGTTAATAATGATTTTCAACCTGAGACTCAACAATCCCCTGAAGTATCTAGGCCAACGGGGAAGAAATTTCAGTAG
Coding sequence (CDS)
ATGCCTCCAAAAGTTATCATGTGCCTGAGAATGAAGAGGCTGCTGCTGGAAGTGCTACAAAAGGACGAGCAAGATGATATTTCACTGGCTAGACTATTGAAGAAAGGTTTTGATTCTAATGTCGCTCTTGAAAAATCTGTCGATCCTATCATATTAGCTCGTTCTCAGGAAATTTCTCGTTTTGAAGATGTGTTTGTTCCTATACCTGGTCTTCATCATGCATCCAATGAAGAACCTGGTCCATCACGTCACTCACCACCGATTAGGTCATCGGTTCCAGATGATGTTCTTACTCCTAATCTGCATTTAGAACCTGCACCTGTTCCTGTTGATGAATTTATTACGACTGATGGAAGGACTTATGTTTCTGCTGATAAGACCCCTGATGATGAAAATGTTGAACTTGCTAATACTGGTACAACCAATAGCGTTAAACTAGATGTTAATAATGATTTTCAACCTGAGACTCAACAATCCCCTGAAGTATCTAGGCCAACGGGGAAGAAATTTCAGTAG
Protein sequence
MPPKVIMCLRMKRLLLEVLQKDEQDDISLARLLKKGFDSNVALEKSVDPIILARSQEISRFEDVFVPIPGLHHASNEEPGPSRHSPPIRSSVPDDVLTPNLHLEPAPVPVDEFITTDGRTYVSADKTPDDENVELANTGTTNSVKLDVNNDFQPETQQSPEVSRPTGKKFQ
Homology
BLAST of IVF0025284 vs. ExPASy TrEMBL
Match:
A0A5A7T1N8 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G002720 PE=4 SV=1)
HSP 1 Score: 260.8 bits (665), Expect = 4.1e-66
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0
Query: 31 RLLKKGFDSNVALEKSVDPIILARSQEISRFEDVFVPIPGLHHASNEEPGPSRHSPPIRS 90
RLLKKGFDSNVALEKSVDPIILARSQEISRFEDVFVPIPGLHHASNEEPGPSRHSPPIRS
Sbjct: 209 RLLKKGFDSNVALEKSVDPIILARSQEISRFEDVFVPIPGLHHASNEEPGPSRHSPPIRS 268
Query: 91 SVPDDVLTPNLHLEPAPVPVDEFITTDGRTYVSADKTPDDENVELANTGTTNSVKLDVNN 150
SVPDDVLTPNLHLEPAPVPVDEFITTDGRTYVSADKTPDDENVELANTGTTNSVKLDVNN
Sbjct: 269 SVPDDVLTPNLHLEPAPVPVDEFITTDGRTYVSADKTPDDENVELANTGTTNSVKLDVNN 328
Query: 151 DFQPETQQSPE 162
DFQPETQQSPE
Sbjct: 329 DFQPETQQSPE 339
BLAST of IVF0025284 vs. ExPASy TrEMBL
Match:
A0A5A7V2P0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1836G00020 PE=4 SV=1)
HSP 1 Score: 216.1 bits (549), Expect = 1.2e-52
Identity = 111/153 (72.55%), Postives = 126/153 (82.35%), Query Frame = 0
Query: 19 LQKDEQDDISLARLLKKGFDSNVALEKSVDPIILARSQEISRFEDVFVPIPGLHHASNEE 78
+ D+QD++ L RLLKKGF SNVA KS DP I ARSQE S FEDVFVP P LHHASN+E
Sbjct: 64 MDSDKQDNVPLVRLLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKE 123
Query: 79 PGPSRHSPPIRSSVPDDVLTPNLHLEPAPVPVDEFITTDGRTYVSADKTPDDENVELANT 138
PGPS+HS RSS+ +DV TPN H +PA +P+DEFIT + RT VSAD+TPDDENVELANT
Sbjct: 124 PGPSQHSYSDRSSISNDVPTPNRHSKPASLPIDEFITIEERTDVSADETPDDENVELANT 183
Query: 139 GTTNSVKLDVNNDFQPETQQSPEVSRPTGKKFQ 172
TTN+V+LDVNNDFQPETQQ PEVSRPTGKKFQ
Sbjct: 184 RTTNTVELDVNNDFQPETQQYPEVSRPTGKKFQ 216
BLAST of IVF0025284 vs. ExPASy TrEMBL
Match:
A0A1S3BQA7 (uncharacterized protein LOC103492059 OS=Cucumis melo OX=3656 GN=LOC103492059 PE=4 SV=1)
HSP 1 Score: 216.1 bits (549), Expect = 1.2e-52
Identity = 111/153 (72.55%), Postives = 126/153 (82.35%), Query Frame = 0
Query: 19 LQKDEQDDISLARLLKKGFDSNVALEKSVDPIILARSQEISRFEDVFVPIPGLHHASNEE 78
+ D+QD++ L RLLKKGF SNVA KS DP I ARSQE S FEDVFVP P LHHASN+E
Sbjct: 1 MDSDKQDNVPLVRLLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKE 60
Query: 79 PGPSRHSPPIRSSVPDDVLTPNLHLEPAPVPVDEFITTDGRTYVSADKTPDDENVELANT 138
PGPS+HS RSS+ +DV TPN H +PA +P+DEFIT + RT VSAD+TPDDENVELANT
Sbjct: 61 PGPSQHSYSDRSSISNDVPTPNRHSKPASLPIDEFITIEERTDVSADETPDDENVELANT 120
Query: 139 GTTNSVKLDVNNDFQPETQQSPEVSRPTGKKFQ 172
TTN+V+LDVNNDFQPETQQ PEVSRPTGKKFQ
Sbjct: 121 RTTNTVELDVNNDFQPETQQYPEVSRPTGKKFQ 153
BLAST of IVF0025284 vs. ExPASy TrEMBL
Match:
A0A5A7T4T2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G002530 PE=4 SV=1)
HSP 1 Score: 164.5 bits (415), Expect = 4.0e-37
Identity = 98/170 (57.65%), Postives = 115/170 (67.65%), Query Frame = 0
Query: 1 MPPKVIMCLRMKRLLLEVLQKDEQDDISLARLLKKGFDSNVALEKSVDPIILARSQEISR 60
MPPKVIM L MK RLLKKGF SNV K VDP+ILARSQE S
Sbjct: 1 MPPKVIMSLSMK------------------RLLKKGFASNVTPTKFVDPVILARSQE-SS 60
Query: 61 FEDVFVPIPGLHHASNEEPGPSRHSPPIRSSVPDDVLTPNLHLEPAPVPVDEFITTDGRT 120
E VF+P PGLH ASN++P PS+HSPPIRSS+ DDV T ++H E APV ++EFITT+GRT
Sbjct: 61 SEVVFIPTPGLHRASNDKPCPSQHSPPIRSSILDDVPTSSMHSELAPVSINEFITTEGRT 120
Query: 121 YVSADKTPDDENVELANTGTTNSV--------KLDVNNDFQPETQQSPEV 163
V ++T DD+NVE N TTN+V +LDVNNDFQPETQQS E+
Sbjct: 121 DVPTNETLDDDNVEPTNISTTNTVEPDVNNDFQLDVNNDFQPETQQSSEI 151
BLAST of IVF0025284 vs. ExPASy TrEMBL
Match:
A0A5D3DSM9 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G00340 PE=4 SV=1)
HSP 1 Score: 150.2 bits (378), Expect = 7.8e-33
Identity = 76/115 (66.09%), Postives = 90/115 (78.26%), Query Frame = 0
Query: 58 ISRFEDVFVPIPGLHHASNEEPGPSRHSPPIRSSVPDDVLTPNLHLEPAPVPVDEFITTD 117
+ + DVF+P P LHHA++EEPGP SPP++SSVPDD P+ HLEPAPVPVDEF T+
Sbjct: 219 VRKILDVFIPTPSLHHAASEEPGPFHDSPPVKSSVPDDDTAPHPHLEPAPVPVDEFTETE 278
Query: 118 GRTYVSADKT-PDDENVELANTGTTNSVKLDVNNDFQPETQQSPEVSRPTGKKFQ 172
GR V DKT +DENVE NT TTN+++LDV+NDFQP TQQSPEVSRPT KKFQ
Sbjct: 279 GRIDVPDDKTLVNDENVEPTNTSTTNTIELDVHNDFQPGTQQSPEVSRPTEKKFQ 333
BLAST of IVF0025284 vs. NCBI nr
Match:
KAA0035507.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK31022.1 putative mitochondrial protein [Cucumis melo var. makuwa])
HSP 1 Score: 258 bits (660), Expect = 2.02e-81
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0
Query: 31 RLLKKGFDSNVALEKSVDPIILARSQEISRFEDVFVPIPGLHHASNEEPGPSRHSPPIRS 90
RLLKKGFDSNVALEKSVDPIILARSQEISRFEDVFVPIPGLHHASNEEPGPSRHSPPIRS
Sbjct: 209 RLLKKGFDSNVALEKSVDPIILARSQEISRFEDVFVPIPGLHHASNEEPGPSRHSPPIRS 268
Query: 91 SVPDDVLTPNLHLEPAPVPVDEFITTDGRTYVSADKTPDDENVELANTGTTNSVKLDVNN 150
SVPDDVLTPNLHLEPAPVPVDEFITTDGRTYVSADKTPDDENVELANTGTTNSVKLDVNN
Sbjct: 269 SVPDDVLTPNLHLEPAPVPVDEFITTDGRTYVSADKTPDDENVELANTGTTNSVKLDVNN 328
Query: 151 DFQPETQQSPE 161
DFQPETQQSPE
Sbjct: 329 DFQPETQQSPE 339
BLAST of IVF0025284 vs. NCBI nr
Match:
KAA0060145.1 (uncharacterized protein E6C27_scaffold542G00020 [Cucumis melo var. makuwa] >TYK19510.1 uncharacterized protein E5676_scaffold1836G00020 [Cucumis melo var. makuwa])
HSP 1 Score: 214 bits (544), Expect = 1.33e-66
Identity = 111/153 (72.55%), Postives = 126/153 (82.35%), Query Frame = 0
Query: 19 LQKDEQDDISLARLLKKGFDSNVALEKSVDPIILARSQEISRFEDVFVPIPGLHHASNEE 78
+ D+QD++ L RLLKKGF SNVA KS DP I ARSQE S FEDVFVP P LHHASN+E
Sbjct: 64 MDSDKQDNVPLVRLLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKE 123
Query: 79 PGPSRHSPPIRSSVPDDVLTPNLHLEPAPVPVDEFITTDGRTYVSADKTPDDENVELANT 138
PGPS+HS RSS+ +DV TPN H +PA +P+DEFIT + RT VSAD+TPDDENVELANT
Sbjct: 124 PGPSQHSYSDRSSISNDVPTPNRHSKPASLPIDEFITIEERTDVSADETPDDENVELANT 183
Query: 139 GTTNSVKLDVNNDFQPETQQSPEVSRPTGKKFQ 171
TTN+V+LDVNNDFQPETQQ PEVSRPTGKKFQ
Sbjct: 184 RTTNTVELDVNNDFQPETQQYPEVSRPTGKKFQ 216
BLAST of IVF0025284 vs. NCBI nr
Match:
XP_008450465.1 (PREDICTED: uncharacterized protein LOC103492059 [Cucumis melo])
HSP 1 Score: 214 bits (544), Expect = 4.28e-65
Identity = 111/153 (72.55%), Postives = 126/153 (82.35%), Query Frame = 0
Query: 19 LQKDEQDDISLARLLKKGFDSNVALEKSVDPIILARSQEISRFEDVFVPIPGLHHASNEE 78
+ D+QD++ L RLLKKGF SNVA KS DP I ARSQE S FEDVFVP P LHHASN+E
Sbjct: 1 MDSDKQDNVPLVRLLKKGFASNVAPAKSADPTISARSQESSSFEDVFVPTPSLHHASNKE 60
Query: 79 PGPSRHSPPIRSSVPDDVLTPNLHLEPAPVPVDEFITTDGRTYVSADKTPDDENVELANT 138
PGPS+HS RSS+ +DV TPN H +PA +P+DEFIT + RT VSAD+TPDDENVELANT
Sbjct: 61 PGPSQHSYSDRSSISNDVPTPNRHSKPASLPIDEFITIEERTDVSADETPDDENVELANT 120
Query: 139 GTTNSVKLDVNNDFQPETQQSPEVSRPTGKKFQ 171
TTN+V+LDVNNDFQPETQQ PEVSRPTGKKFQ
Sbjct: 121 RTTNTVELDVNNDFQPETQQYPEVSRPTGKKFQ 153
BLAST of IVF0025284 vs. NCBI nr
Match:
KAA0038370.1 (uncharacterized protein E6C27_scaffold270G002530 [Cucumis melo var. makuwa])
HSP 1 Score: 162 bits (410), Expect = 2.62e-46
Identity = 98/170 (57.65%), Postives = 115/170 (67.65%), Query Frame = 0
Query: 1 MPPKVIMCLRMKRLLLEVLQKDEQDDISLARLLKKGFDSNVALEKSVDPIILARSQEISR 60
MPPKVIM L MKR LLKKGF SNV K VDP+ILARSQE S
Sbjct: 1 MPPKVIMSLSMKR------------------LLKKGFASNVTPTKFVDPVILARSQESSS 60
Query: 61 FEDVFVPIPGLHHASNEEPGPSRHSPPIRSSVPDDVLTPNLHLEPAPVPVDEFITTDGRT 120
E VF+P PGLH ASN++P PS+HSPPIRSS+ DDV T ++H E APV ++EFITT+GRT
Sbjct: 61 -EVVFIPTPGLHRASNDKPCPSQHSPPIRSSILDDVPTSSMHSELAPVSINEFITTEGRT 120
Query: 121 YVSADKTPDDENVELANTGTTNSVK--------LDVNNDFQPETQQSPEV 162
V ++T DD+NVE N TTN+V+ LDVNNDFQPETQQS E+
Sbjct: 121 DVPTNETLDDDNVEPTNISTTNTVEPDVNNDFQLDVNNDFQPETQQSSEI 151
BLAST of IVF0025284 vs. NCBI nr
Match:
TYK26469.1 (putative mitochondrial protein [Cucumis melo var. makuwa])
HSP 1 Score: 148 bits (374), Expect = 4.02e-40
Identity = 76/115 (66.09%), Postives = 90/115 (78.26%), Query Frame = 0
Query: 58 ISRFEDVFVPIPGLHHASNEEPGPSRHSPPIRSSVPDDVLTPNLHLEPAPVPVDEFITTD 117
+ + DVF+P P LHHA++EEPGP SPP++SSVPDD P+ HLEPAPVPVDEF T+
Sbjct: 219 VRKILDVFIPTPSLHHAASEEPGPFHDSPPVKSSVPDDDTAPHPHLEPAPVPVDEFTETE 278
Query: 118 GRTYVSADKT-PDDENVELANTGTTNSVKLDVNNDFQPETQQSPEVSRPTGKKFQ 171
GR V DKT +DENVE NT TTN+++LDV+NDFQP TQQSPEVSRPT KKFQ
Sbjct: 279 GRIDVPDDKTLVNDENVEPTNTSTTNTIELDVHNDFQPGTQQSPEVSRPTEKKFQ 333
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7T1N8 | 4.1e-66 | 100.00 | Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... | [more] |
A0A5A7V2P0 | 1.2e-52 | 72.55 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3BQA7 | 1.2e-52 | 72.55 | uncharacterized protein LOC103492059 OS=Cucumis melo OX=3656 GN=LOC103492059 PE=... | [more] |
A0A5A7T4T2 | 4.0e-37 | 57.65 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3DSM9 | 7.8e-33 | 66.09 | Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... | [more] |
Match Name | E-value | Identity | Description | |
KAA0035507.1 | 2.02e-81 | 100.00 | putative mitochondrial protein [Cucumis melo var. makuwa] >TYK31022.1 putative m... | [more] |
KAA0060145.1 | 1.33e-66 | 72.55 | uncharacterized protein E6C27_scaffold542G00020 [Cucumis melo var. makuwa] >TYK1... | [more] |
XP_008450465.1 | 4.28e-65 | 72.55 | PREDICTED: uncharacterized protein LOC103492059 [Cucumis melo] | [more] |
KAA0038370.1 | 2.62e-46 | 57.65 | uncharacterized protein E6C27_scaffold270G002530 [Cucumis melo var. makuwa] | [more] |
TYK26469.1 | 4.02e-40 | 66.09 | putative mitochondrial protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |