IVF0025283 (gene) Melon (IVF77) v1

Overview
NameIVF0025283
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionSuperoxide dismutase [Cu-Zn]
Locationchr05: 24281085 .. 24285390 (+)
RNA-Seq ExpressionIVF0025283
SyntenyIVF0025283
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATGATTATTTCCATCACCCCTTGGCTTTTTCGCTCCATTCGGCCATGCCTTACAAATTTCGCTCCACTCCCATTCTTCTCTTCCTCTCCTCTTTCAACTGCATTGAGGCCGATCCTTTAGGTAAATGGTTCTCTCCCATTTCATCTCTAATTCCTCTGTTTCTTTTTTATTTTACTTGTTCTTTTTCCAGCCGGATCCTCCATTTCTGTGGTGAAACTGAATTGTTCTTATCGATTTCTTGTTTGAATTCTGTTTTTCTCTGTTTGTGTCTGTGTGTGTTTTTTAATTTGTTTTGGCATGTTGAAGTTTAAAGATACCAAAAGTTGCGCTTCACTACTTTCCAGTTTCGATGGTAGCTGCTAGTTGTAACGCTTACGTTCTTGGTTTTTTGTTAAATTTTTTTTGCTTCTTGTTGTTTACTGTTTAGCAAAAAGCATGGGGAATACTACCAAAGTCCCGAACTTAATAGATAGATGATCACGTGCTAAGAAGTGCGATACTTTCCGTAGCTGATACGTGACACAGTGTCTGACATTTGTTTGACACATATTAGAAACTTGTTAGTATAACATATGTGTTAAACAGGCATAGAACACCTGTTGTACTAAAAAAAATATTTGTATGATAATAATAATAACTTTGAAGTGTAAAATATATCCAGCTAAGTTTTTTTAAGTATACAAGTGCATTAACTCATTTCCTCTTGATTTTCTTTTGGTATAAAAATTATATATATTTTGAAAACCGTATACTTTAATAAATGTATCCTTGTGCATTATGTTCTAGATTTTTAGAATATGGTGTGTCGTTGTGTCTATATCGTGTCGTATCAATATCTCGTATTCGTATCTGTGTTTGTTAGATCATATGTATAAGCGAGGACAGCTATTTCTGATGTTACAAGACCTTCTTCAAATTTTACAGGAAAATCATTCAATTTGAAAATTCAAGATTACAAATGCAATCTAAACCAAACTTCAAGAACAAAAAGTGTTATTTGTTAATATCCTTGCGACCTCACCCAAAGTATCTATTACAAACTTCAGAAAAAACTTCATAATAAGGGTTGGGTTGGAAAAAAAACATAAAGAAGTCCCACCCCAACCTAACTCTAAAAAACATAAAAAAATTCAACCCAACCCAAACCTTACAATTTGGTTGAGTAGTCCGTGTTGTTCGGGTTGTCGGGTTATTTGAACTCCTAGTTTTAGCTAAGTGTAAACTTATTTAAGGATGTTGAAGGTTAGCATTGATCTTTCTCTCTCAAATTTGGTCAAGAGGAATTATTTCTTGAGTCATTCATATGGTTCCATTTTGCTTTTGAGCATTTGAATTGTTTGTTAACTACTTCTTTGATTAATATATTCGAAAGTGAAATTTCCTTGGTTCACTTTATTGATCAGTGTCCCATTTTACCAGTTATTTCAGTTCTCCTAATAACCTTCATTGGACTTGAGTTTGGTTAACACAAAACAATGGTGAAAGCTGTAGCTGTTCTTGAGAGCAATCAGGGAGTCAGTGGAACCATCTTCTTTAGCCAAAATGGCAATGGTAGCTCAAATCAGTGTTCAAATTTAAATGCTTACTGCTTTTATGTTTTCTTTTATGTGGTTTTCAATTTTGCCCTTGTATTTTTCAGGTCCAACTACAATTACAGGAAATATTTCTGGTCTTAAGGCAGGGCTCCATGGCTTCCATGTCCATGCCCTTGGGGACACAACCAATGGTTGCTTATCAACTGGTACATTCTCATGAGTTGCACCATCTTAGTTTCTCAATGTTAGGTACAGAGTGTCTTTTAGAACATAATAACTCCACTTGCAAGCAAATTGGTTGCGCAGGGCCACATTTCAACCCTGAAGGCAAAGACCATGGTGCTCCAGATGATGAAAATCGTCATGTTGGTGATCTTGGAAATGTGGTTGCCGGTGATAATGGTCTGTTTAATGCTGTTCCATATTGCTTTTCATTTTCTCCCTGAAGTAACTATCTTTTTGGTCCTCGAGTTTTGAAGAATGTGTGTTTTTTATACTTGAATTTTCAAAACATGCTTTTTTACTCCTTGAGTCTTTTTGGAACAGATGTATTTGGTCTCGAGTTTTCAATATGTAATTTTTTAATCCTTAAATTGTTAAGATTAGGTTTAAAAGGTCCCTTTAAGTGTATTGCCATTATTATTTTATATTAATTATATCACATGACATTTTGAAGTACAGAAATAATTTTAGAGAAAAGTAACTTTCTTAAAATTTATTTTTCCAATATAAAATAATGATAAGAAATTTATGCGGGGGCCTTTTGAACTTTAAAACTCAGAAACTAAAAAAAGTACATTTAAGAAATTTAGAGATCAAATGTACTTGTTCTGAAAAATTTGGAGTCTAAACAAGTATATCTTGAAAACTGAGAAACTAAATTAAAAAGGTGATTTTGTCTAAATTTCAATGAGCTGGAAGTGGACTCTAAATTCAATCCCTCCAAAATGCAGGACATGGGATTCCTTGAAGGAATCCAGCTTCCCTCTCCATCCTCCCATCAATTACAATATTTCAATAAATATCACTGAATTCCATGTTAAAGCACTCTTTTCTTTTCCTTTTTGAGGATTAATTTGACATGATTGTAAATGTTGTTACGTTTACGGTACAGGTACTGCTACTTTCTCTATTATTGACAAACAGGTTTGGACAATTTTATGTTTAGTTTGATACTTTGCCATCTCTACTGGAAGTCTCAACTAGTGAGCATTACTTCTTTCTATGTTATGCAGATTTCCCTTGTTGGACGAAATTCCGTTCTTGGAAGGTCTATTGTTGTCCATGCAGATCCTGATGATCTTGGCAGGGGTAATTTTATAAATCTTCATTGCTATATTTCTAATACGAATTATACACATTTAACTCTATCGCAACTAATCTTATCATGCAAAGATTTTAATGATTGACCTAAAGAAACTAACCTCAATTGCATTAATTGTAACTATGCTTCACTTTCGCCTTGGTATTAATTTGATCTTCTTTGAATTCAGTGATATTCTTTTGAGGTTCTTCCCATTTTTTCTCCATACGTGCAGAACATCCATATTCTTCACATTTGTATAATTAAGTTTATTCAAATCTTAAACCAATAGATTATTTTATGTGCTGGAAGTATCACTCTTTGAAATATTTGTTTCCCTTCAATTTCTTGTAAACCTCCTGATGTATTCAAAAATCCCTCAAAGGAAACTTTTTTATCACAGAATGCAGAATGATTATAAAATAACTGTAACCAGCAGCCATTTATATAGGCTGACATAAACAACCTAAGGGAAAAGAGGCTCTCGATAAAAACAAAGAACTAACAGCTTATTAAATAAAGCTGTAAAAATACAACTAAGAAGGGTAAAATCTAAGAACAAAGAATTATTTAACTTAAACAAGAAACAACCCCGAGAAAGAACAAGAAACTAAGAATAAACTAATAACAATAGCCCTCATGACCCCCTTTTGTCTCTGCTTGTCAAGTGGATGGCATTCCATCAGATTCAGGATAACCAAATAAAGAAATCTGAAGCATAATCTGACCTTGGCTGCAGGTGGAACTGAACTTAGCCTGACCACTGGCAATGCGGGTGAGAGAATAGGTTGTGGTAAGTACATAATCATACTAATTCGTCACATTCACATTGCTTCTAAGGATTATGCTATGCTAGCCAAGCAGTTAAAAAAAACAAAAAACATACTTGTTCAAACCCTACCTTTCTTTTTTAGATAATAGGTCTGAGATTTGATAGTACAAGTTCATATCAGTTAAATTATTGAACTTGCAATTATCTATCATTAGGTGTATGTCTTTTAGTTAATTTACCAAGGTTTTAAATTTTACTCTCCTGACAAATGTACGGTTCTAAATAACAGTCATATATGTATAATGACGTAATGTGACAAATTGTACAAGTATTTTACTTATTATACATGTACACACTTCTCTCTGGGTTTATCGTTATAATTTATATCAATTCTTTAACTTGCACAAACAGATTCAGCACCCCGAATGTATTGATTGGGACATTTTTTTTTACTCTTGGGATTGATCTGTTCTCAAATACAGGTAGCTAAAATTTTCCTTGACGTAAATCTCTGTTATTATATGTTTGTTGCAGGCGTTATTGGACTGCAAGAGTGAAGTACACTTCGACTTGCATGGTCTGTGATGATTGATGAACAAGTATGATGTATAAAATGCTTTACTTTGGAACATATATATTGTATCTAAAATAAGACGGCTTCAAGCCTTATAGCAGAAATAAATAAAATTAGCATG

mRNA sequence

TATGATTATTTCCATCACCCCTTGGCTTTTTCGCTCCATTCGGCCATGCCTTACAAATTTCGCTCCACTCCCATTCTTCTCTTCCTCTCCTCTTTCAACTGCATTGAGGCCGATCCTTTAGTTATTTCAGTTCTCCTAATAACCTTCATTGGACTTGAGTTTGGTTAACACAAAACAATGGTGAAAGCTGTAGCTGTTCTTGAGAGCAATCAGGGAGTCAGTGGAACCATCTTCTTTAGCCAAAATGGCAATGGTCCAACTACAATTACAGGAAATATTTCTGGTCTTAAGGCAGGGCTCCATGGCTTCCATGTCCATGCCCTTGGGGACACAACCAATGGTTGCTTATCAACTGGGCCACATTTCAACCCTGAAGGCAAAGACCATGGTGCTCCAGATGATGAAAATCGTCATGTTGGTGATCTTGGAAATGTGGTTGCCGGTGATAATGGTACTGCTACTTTCTCTATTATTGACAAACAGATTTCCCTTGTTGGACGAAATTCCGTTCTTGGAAGGTCTATTGTTGTCCATGCAGATCCTGATGATCTTGGCAGGGGTGGAACTGAACTTAGCCTGACCACTGGCAATGCGGGTGAGAGAATAGGTTGTGGCGTTATTGGACTGCAAGAGTGAAGTACACTTCGACTTGCATGGTCTGTGATGATTGATGAACAAGTATGATGTATAAAATGCTTTACTTTGGAACATATATATTGTATCTAAAATAAGACGGCTTCAAGCCTTATAGCAGAAATAAATAAAATTAGCATG

Coding sequence (CDS)

ATGGTGAAAGCTGTAGCTGTTCTTGAGAGCAATCAGGGAGTCAGTGGAACCATCTTCTTTAGCCAAAATGGCAATGGTCCAACTACAATTACAGGAAATATTTCTGGTCTTAAGGCAGGGCTCCATGGCTTCCATGTCCATGCCCTTGGGGACACAACCAATGGTTGCTTATCAACTGGGCCACATTTCAACCCTGAAGGCAAAGACCATGGTGCTCCAGATGATGAAAATCGTCATGTTGGTGATCTTGGAAATGTGGTTGCCGGTGATAATGGTACTGCTACTTTCTCTATTATTGACAAACAGATTTCCCTTGTTGGACGAAATTCCGTTCTTGGAAGGTCTATTGTTGTCCATGCAGATCCTGATGATCTTGGCAGGGGTGGAACTGAACTTAGCCTGACCACTGGCAATGCGGGTGAGAGAATAGGTTGTGGCGTTATTGGACTGCAAGAGTGA

Protein sequence

MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTGPHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHADPDDLGRGGTELSLTTGNAGERIGCGVIGLQE
Homology
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BLAST of IVF0025283 vs. ExPASy Swiss-Prot
Match: Q07796 (Superoxide dismutase [Cu-Zn] OS=Ipomoea batatas OX=4120 GN=SODCC PE=2 SV=2)

HSP 1 Score: 249.2 bits (635), Expect = 3.0e-65
Identity = 114/151 (75.50%), Postives = 134/151 (88.74%), Query Frame = 0 

Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVL S++GVSGTIFFSQ G+GPTT+TGN+SGLK GLHGFHVHALGDTTNGC+STG
Sbjct: 1   MVKAVAVLSSSEGVSGTIFFSQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNP GK+HGAP D+NRH GDLGN+  G++GTA+F+I DKQI L G NSV+GR++VVH 
Sbjct: 61  PHFNPAGKEHGAPGDDNRHAGDLGNITVGEDGTASFTITDKQIPLTGANSVIGRAVVVHG 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQ 152
           DPDDLG+GG ELS +TGNAG R+ CG+IGLQ
Sbjct: 121 DPDDLGKGGHELSKSTGNAGGRVACGIIGLQ 151

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BLAST of IVF0025283 vs. ExPASy Swiss-Prot
Match: P93258 (Superoxide dismutase [Cu-Zn] 1 OS=Mesembryanthemum crystallinum OX=3544 GN=SODCC.1 PE=2 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 2.5e-64
Identity = 113/151 (74.83%), Postives = 132/151 (87.42%), Query Frame = 0 

Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAV VL S++GVSGT+ F+Q G+GPTT+TGN+SGL+ GLHGFHVHALGDTTNGC+STG
Sbjct: 1   MVKAVVVLSSSEGVSGTVQFTQEGSGPTTVTGNVSGLRPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNP GK+HGAP+DE RH GDLGN+  GD+GTATF+IID QI L G NS++GR++VVHA
Sbjct: 61  PHFNPAGKEHGAPEDETRHAGDLGNITVGDDGTATFTIIDSQIPLTGPNSIVGRAVVVHA 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQ 152
           DPDDLGRGG ELS  TGNAG R+ CGVIGLQ
Sbjct: 121 DPDDLGRGGHELSKATGNAGGRVACGVIGLQ 151

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BLAST of IVF0025283 vs. ExPASy Swiss-Prot
Match: P27082 (Superoxide dismutase [Cu-Zn] OS=Nicotiana plumbaginifolia OX=4092 GN=SODCC PE=2 SV=2)

HSP 1 Score: 243.0 bits (619), Expect = 2.1e-63
Identity = 110/151 (72.85%), Postives = 134/151 (88.74%), Query Frame = 0 

Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVL S++GVSGTIFF+Q+G+ PTT+TGN+SGLK GLHGFHVHALGDTTNGC+STG
Sbjct: 1   MVKAVAVLSSSEGVSGTIFFTQDGDAPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PH+NP GK+HGAP+DE RH GDLGN+  G++GTA+F++ DKQI L G  S++GR++VVHA
Sbjct: 61  PHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTLTDKQIPLAGPQSIIGRAVVVHA 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQ 152
           DPDDLG+GG ELS TTGNAG R+ CG+IGLQ
Sbjct: 121 DPDDLGKGGHELSKTTGNAGGRVACGIIGLQ 151

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BLAST of IVF0025283 vs. ExPASy Swiss-Prot
Match: P22233 (Superoxide dismutase [Cu-Zn] OS=Spinacia oleracea OX=3562 GN=SODCC PE=2 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 2.1e-63
Identity = 110/151 (72.85%), Postives = 133/151 (88.08%), Query Frame = 0 

Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           M KAV VL S++GVSGT++F+Q G+GPTT+TGN+SGLK GLHGFHVHALGDTTNGC+STG
Sbjct: 1   MGKAVVVLSSSEGVSGTVYFAQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PH+NP GK+HGAP+D+ RH GDLGN+  GD+GTATF+IID QI L G NS++GR++VVHA
Sbjct: 61  PHYNPNGKEHGAPEDDVRHAGDLGNITVGDDGTATFTIIDSQIPLSGPNSIVGRAVVVHA 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQ 152
           +PDDLGRGG ELS TTGNAG R+ CG+IGLQ
Sbjct: 121 EPDDLGRGGHELSKTTGNAGGRVACGIIGLQ 151

[Close]
BLAST of IVF0025283 vs. ExPASy Swiss-Prot
Match: O04996 (Superoxide dismutase [Cu-Zn] OS=Solidago canadensis var. scabra OX=59294 GN=SODCC PE=2 SV=3)

HSP 1 Score: 242.3 bits (617), Expect = 3.6e-63
Identity = 113/152 (74.34%), Postives = 133/152 (87.50%), Query Frame = 0 

Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNG-PTTITGNISGLKAGLHGFHVHALGDTTNGCLST 60
           MVKAVAVL S++GVSGTIFFSQ   G PTT+TG++SGLK G HGFHVHALGDTTNGC+ST
Sbjct: 1   MVKAVAVLSSSEGVSGTIFFSQEAEGAPTTVTGDLSGLKPGPHGFHVHALGDTTNGCMST 60

Query: 61  GPHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVH 120
           GPH+NP GKDHGAPDDE+RH GDLGNV  G++GTA F+I+DKQI L+G  S++GR++VVH
Sbjct: 61  GPHYNPHGKDHGAPDDEHRHAGDLGNVTVGEDGTAKFTIVDKQIPLIGAQSIIGRAVVVH 120

Query: 121 ADPDDLGRGGTELSLTTGNAGERIGCGVIGLQ 152
           ADPDDLG+GG ELS TTGNAG R+ CG+IGLQ
Sbjct: 121 ADPDDLGKGGHELSKTTGNAGGRVACGIIGLQ 152

[Close]
BLAST of IVF0025283 vs. ExPASy TrEMBL
Match: A0A1S3C1D1 (Superoxide dismutase [Cu-Zn] OS=Cucumis melo OX=3656 GN=LOC103495717 PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.0e-80
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0 

Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG
Sbjct: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE 153
           DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE
Sbjct: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE 152

[Close]
BLAST of IVF0025283 vs. ExPASy TrEMBL
Match: A0A0A0LIH2 (Superoxide dismutase [Cu-Zn] OS=Cucumis sativus OX=3659 GN=Csa_2G013250 PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 7.1e-78
Identity = 148/152 (97.37%), Postives = 150/152 (98.68%), Query Frame = 0 

Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLESNQGVSG+IFFSQNGNGPT ITGNISGLKAGLHGFHVHALGDTTNGCLSTG
Sbjct: 1   MVKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNPEGKDHGAPDDENRHVGDLGNVVAGD+GTATFSIIDKQISLVG NSVLGRSIVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHA 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE 153
           DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE
Sbjct: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE 152

[Close]
BLAST of IVF0025283 vs. ExPASy TrEMBL
Match: A0A5D3D4B3 (Superoxide dismutase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001080 PE=3 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 6.0e-77
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG
Sbjct: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCG 147
           DPDDLGRGGTELSLTTGNAGERIGCG
Sbjct: 121 DPDDLGRGGTELSLTTGNAGERIGCG 146

[Close]
BLAST of IVF0025283 vs. ExPASy TrEMBL
Match: A0A5A7VD31 (Superoxide dismutase [Cu-Zn] OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G001550 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 3.6e-74
Identity = 145/152 (95.39%), Postives = 145/152 (95.39%), Query Frame = 0 

Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG
Sbjct: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNG  T S    QISLVGRNSVLGRSIVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGLIT-SFYVMQISLVGRNSVLGRSIVVHA 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE 153
           DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE
Sbjct: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE 151

[Close]
BLAST of IVF0025283 vs. ExPASy TrEMBL
Match: A0A6J1G334 (Superoxide dismutase [Cu-Zn] OS=Cucurbita moschata OX=3662 GN=LOC111450340 PE=3 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 1.8e-73
Identity = 139/152 (91.45%), Postives = 144/152 (94.74%), Query Frame = 0 

Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLESNQGV GT+FF+QNGNGPTT+ GNISGL  GLHGFHVHALGDTTNGC STG
Sbjct: 1   MVKAVAVLESNQGVKGTVFFNQNGNGPTTVRGNISGLTPGLHGFHVHALGDTTNGCSSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNPEGKDHGAPDDENRHVGDLGN+VAGD+GTATFSIIDKQISLVG NSVLGRSIVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNLVAGDDGTATFSIIDKQISLVGTNSVLGRSIVVHA 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE 153
           DPDDLGRG TELSLTTGNAGERI CGVIGLQE
Sbjct: 121 DPDDLGRGQTELSLTTGNAGERIACGVIGLQE 152

[Close]
BLAST of IVF0025283 vs. NCBI nr
Match: XP_008455574.1 (PREDICTED: superoxide dismutase [Cu-Zn] isoform X1 [Cucumis melo])

HSP 1 Score: 306 bits (783), Expect = 7.74e-105
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0 

Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG
Sbjct: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE 152
           DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE
Sbjct: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE 152

[Close]
BLAST of IVF0025283 vs. NCBI nr
Match: XP_004139207.1 (superoxide dismutase [Cu-Zn] 1 [Cucumis sativus] >XP_031736634.1 superoxide dismutase [Cu-Zn] 1 [Cucumis sativus] >KGN60844.1 hypothetical protein Csa_019273 [Cucumis sativus])

HSP 1 Score: 297 bits (761), Expect = 1.75e-101
Identity = 148/152 (97.37%), Postives = 150/152 (98.68%), Query Frame = 0 

Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLESNQGVSG+IFFSQNGNGPT ITGNISGLKAGLHGFHVHALGDTTNGCLSTG
Sbjct: 1   MVKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNPEGKDHGAPDDENRHVGDLGNVVAGD+GTATFSIIDKQISLVG NSVLGRSIVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHA 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE 152
           DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE
Sbjct: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE 152

[Close]
BLAST of IVF0025283 vs. NCBI nr
Match: TYK18385.1 (superoxide dismutase [Cucumis melo var. makuwa])

HSP 1 Score: 294 bits (753), Expect = 9.73e-100
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG
Sbjct: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCG 146
           DPDDLGRGGTELSLTTGNAGERIGCG
Sbjct: 121 DPDDLGRGGTELSLTTGNAGERIGCG 146

[Close]
BLAST of IVF0025283 vs. NCBI nr
Match: XP_038890446.1 (superoxide dismutase [Cu-Zn] 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 287 bits (735), Expect = 1.62e-97
Identity = 141/152 (92.76%), Postives = 147/152 (96.71%), Query Frame = 0 

Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLESN+GVSGT+FFSQN NGPTT+TGNISGLKAGLHGFHVHA GDTTNGCLSTG
Sbjct: 1   MVKAVAVLESNRGVSGTVFFSQNDNGPTTVTGNISGLKAGLHGFHVHAFGDTTNGCLSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNPEGKDHGAP DENRHVGDLGN+VAGD+GTATFSI+DKQISLVG NSVLGRSIVVHA
Sbjct: 61  PHFNPEGKDHGAPHDENRHVGDLGNLVAGDDGTATFSIVDKQISLVGPNSVLGRSIVVHA 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE 152
           DPDDLGRG TELSLTTGNAGERIGCGVIGLQE
Sbjct: 121 DPDDLGRGQTELSLTTGNAGERIGCGVIGLQE 152

[Close]
BLAST of IVF0025283 vs. NCBI nr
Match: KAA0063641.1 (superoxide dismutase [Cucumis melo var. makuwa])

HSP 1 Score: 285 bits (730), Expect = 9.05e-97
Identity = 145/152 (95.39%), Postives = 145/152 (95.39%), Query Frame = 0 

Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG
Sbjct: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNG  T S    QISLVGRNSVLGRSIVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGLIT-SFYVMQISLVGRNSVLGRSIVVHA 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE 152
           DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE
Sbjct: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE 151

[Close]
BLAST of IVF0025283 vs. TAIR 10
Match: AT1G08830.1 (copper/zinc superoxide dismutase 1 )

HSP 1 Score: 238.8 bits (608), Expect = 2.8e-63
Identity = 109/151 (72.19%), Postives = 130/151 (86.09%), Query Frame = 0 

Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           M K VAVL S++GV+GTIFF+Q G+G TT++G +SGLK GLHGFHVHALGDTTNGC+STG
Sbjct: 1   MAKGVAVLNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNP+GK HGAP+D NRH GDLGN+  GD+GTATF+I D QI L G NS++GR++VVHA
Sbjct: 61  PHFNPDGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHA 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQ 152
           DPDDLG+GG ELSL TGNAG R+ CG+IGLQ
Sbjct: 121 DPDDLGKGGHELSLATGNAGGRVACGIIGLQ 151

[Close]
BLAST of IVF0025283 vs. TAIR 10
Match: AT1G08830.2 (copper/zinc superoxide dismutase 1 )

HSP 1 Score: 238.8 bits (608), Expect = 2.8e-63
Identity = 109/151 (72.19%), Postives = 130/151 (86.09%), Query Frame = 0 

Query: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           M K VAVL S++GV+GTIFF+Q G+G TT++G +SGLK GLHGFHVHALGDTTNGC+STG
Sbjct: 1   MAKGVAVLNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120
           PHFNP+GK HGAP+D NRH GDLGN+  GD+GTATF+I D QI L G NS++GR++VVHA
Sbjct: 61  PHFNPDGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHA 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQ 152
           DPDDLG+GG ELSL TGNAG R+ CG+IGLQ
Sbjct: 121 DPDDLGKGGHELSLATGNAGGRVACGIIGLQ 151

[Close]
BLAST of IVF0025283 vs. TAIR 10
Match: AT5G18100.1 (copper/zinc superoxide dismutase 3 )

HSP 1 Score: 194.1 bits (492), Expect = 8.0e-50
Identity = 89/150 (59.33%), Postives = 115/150 (76.67%), Query Frame = 0 

Query: 2   VKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTGP 61
           ++AVA++  +  V G + F Q+ +G T +TG ISGL  G HGFH+H+ GDTTNGC+STGP
Sbjct: 8   LRAVALIAGDNNVRGCLQFVQDISGTTHVTGKISGLSPGFHGFHIHSFGDTTNGCISTGP 67

Query: 62  HFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHAD 121
           HFNP  + HG P++E RH GDLGN++AG NG A   I DK I L G+ S+LGR++VVHAD
Sbjct: 68  HFNPLNRVHGPPNEEERHAGDLGNILAGSNGVAEILIKDKHIPLSGQYSILGRAVVVHAD 127

Query: 122 PDDLGRGGTELSLTTGNAGERIGCGVIGLQ 152
           PDDLG+GG +LS +TGNAG R+GCG+IGLQ
Sbjct: 128 PDDLGKGGHKLSKSTGNAGSRVGCGIIGLQ 157

[Close]
BLAST of IVF0025283 vs. TAIR 10
Match: AT2G28190.1 (copper/zinc superoxide dismutase 2 )

HSP 1 Score: 186.4 bits (472), Expect = 1.7e-47
Identity = 90/148 (60.81%), Postives = 108/148 (72.97%), Query Frame = 0 

Query: 3   KAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTGPH 62
           KAVAVL+    V G +  +Q+ +GPTT+   I+GL  G HGFH+H  GDTTNGC+STGPH
Sbjct: 66  KAVAVLKGTSDVEGVVTLTQDDSGPTTVNVRITGLTPGPHGFHLHEFGDTTNGCISTGPH 125

Query: 63  FNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHADP 122
           FNP    HGAP+DE RH GDLGN+ A  +G A  +I+D QI L G NSV+GR+ VVH   
Sbjct: 126 FNPNNMTHGAPEDECRHAGDLGNINANADGVAETTIVDNQIPLTGPNSVVGRAFVVHELK 185

Query: 123 DDLGRGGTELSLTTGNAGERIGCGVIGL 151
           DDLG+GG ELSLTTGNAG R+ CGVIGL
Sbjct: 186 DDLGKGGHELSLTTGNAGGRLACGVIGL 213

[Close]
BLAST of IVF0025283 vs. TAIR 10
Match: AT5G18100.2 (copper/zinc superoxide dismutase 3 )

HSP 1 Score: 159.8 bits (403), Expect = 1.7e-39
Identity = 73/127 (57.48%), Postives = 95/127 (74.80%), Query Frame = 0 

Query: 2   VKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTGP 61
           ++AVA++  +  V G + F Q+ +G T +TG ISGL  G HGFH+H+ GDTTNGC+STGP
Sbjct: 8   LRAVALIAGDNNVRGCLQFVQDISGTTHVTGKISGLSPGFHGFHIHSFGDTTNGCISTGP 67

Query: 62  HFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHAD 121
           HFNP  + HG P++E RH GDLGN++AG NG A   I DK I L G+ S+LGR++VVHAD
Sbjct: 68  HFNPLNRVHGPPNEEERHAGDLGNILAGSNGVAEILIKDKHIPLSGQYSILGRAVVVHAD 127

Query: 122 PDDLGRG 129
           PDDLG+G
Sbjct: 128 PDDLGKG 134

The following BLAST results are available for this feature:
BLAST of IVF0025283 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q077963.0e-6575.50Superoxide dismutase [Cu-Zn] OS=Ipomoea batatas OX=4120 GN=SODCC PE=2 SV=2[more]
P932582.5e-6474.83Superoxide dismutase [Cu-Zn] 1 OS=Mesembryanthemum crystallinum OX=3544 GN=SODCC... [more]
P270822.1e-6372.85Superoxide dismutase [Cu-Zn] OS=Nicotiana plumbaginifolia OX=4092 GN=SODCC PE=2 ... [more]
P222332.1e-6372.85Superoxide dismutase [Cu-Zn] OS=Spinacia oleracea OX=3562 GN=SODCC PE=2 SV=1[more]
O049963.6e-6374.34Superoxide dismutase [Cu-Zn] OS=Solidago canadensis var. scabra OX=59294 GN=SODC... [more]
BLAST of IVF0025283 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3C1D12.0e-80100.00Superoxide dismutase [Cu-Zn] OS=Cucumis melo OX=3656 GN=LOC103495717 PE=3 SV=1[more]
A0A0A0LIH27.1e-7897.37Superoxide dismutase [Cu-Zn] OS=Cucumis sativus OX=3659 GN=Csa_2G013250 PE=3 SV=... [more]
A0A5D3D4B36.0e-77100.00Superoxide dismutase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456... [more]
A0A5A7VD313.6e-7495.39Superoxide dismutase [Cu-Zn] OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
A0A6J1G3341.8e-7391.45Superoxide dismutase [Cu-Zn] OS=Cucurbita moschata OX=3662 GN=LOC111450340 PE=3 ... [more]
BLAST of IVF0025283 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008455574.17.74e-105100.00PREDICTED: superoxide dismutase [Cu-Zn] isoform X1 [Cucumis melo][more]
XP_004139207.11.75e-10197.37superoxide dismutase [Cu-Zn] 1 [Cucumis sativus] >XP_031736634.1 superoxide dism... [more]
TYK18385.19.73e-100100.00superoxide dismutase [Cucumis melo var. makuwa][more]
XP_038890446.11.62e-9792.76superoxide dismutase [Cu-Zn] 1-like isoform X2 [Benincasa hispida][more]
KAA0063641.19.05e-9795.39superoxide dismutase [Cucumis melo var. makuwa][more]
BLAST of IVF0025283 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G08830.12.8e-6372.19copper/zinc superoxide dismutase 1 [more]
AT1G08830.22.8e-6372.19copper/zinc superoxide dismutase 1 [more]
AT5G18100.18.0e-5059.33copper/zinc superoxide dismutase 3 [more]
AT2G28190.11.7e-4760.81copper/zinc superoxide dismutase 2 [more]
AT5G18100.21.7e-3957.48copper/zinc superoxide dismutase 3 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001424Superoxide dismutase, copper/zinc binding domainPRINTSPR00068CUZNDISMTASEcoord: 98..120
score: 54.73
coord: 43..65
score: 79.25
coord: 123..149
score: 68.54
coord: 79..88
score: 74.74
IPR001424Superoxide dismutase, copper/zinc binding domainPFAMPF00080Sod_Cucoord: 11..148
e-value: 2.4E-48
score: 163.9
IPR001424Superoxide dismutase, copper/zinc binding domainCDDcd00305Cu-Zn_Superoxide_Dismutasecoord: 2..145
e-value: 4.04461E-60
score: 180.919
IPR036423Superoxide dismutase-like, copper/zinc binding domain superfamilyGENE3D2.60.40.200Superoxide dismutase, copper/zinc binding domaincoord: 1..152
e-value: 9.7E-66
score: 222.7
IPR036423Superoxide dismutase-like, copper/zinc binding domain superfamilySUPERFAMILY49329Cu,Zn superoxide dismutase-likecoord: 2..150
NoneNo IPR availablePANTHERPTHR10003:SF84SUPEROXIDE DISMUTASE [CU-ZN]coord: 1..152
IPR024134Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperonePANTHERPTHR10003SUPEROXIDE DISMUTASE CU-ZN -RELATEDcoord: 1..152
IPR018152Superoxide dismutase, copper/zinc, binding sitePROSITEPS00332SOD_CU_ZN_2coord: 137..148
IPR018152Superoxide dismutase, copper/zinc, binding sitePROSITEPS00087SOD_CU_ZN_1coord: 43..53

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0025283.2IVF0025283.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019430 removal of superoxide radicals
biological_process GO:0006801 superoxide metabolic process
molecular_function GO:0005507 copper ion binding
molecular_function GO:0004784 superoxide dismutase activity
molecular_function GO:0046872 metal ion binding