IVF0025269 (gene) Melon (IVF77) v1

Overview
NameIVF0025269
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionprotein MICRORCHIDIA 7
Locationchr10: 14260734 .. 14261412 (-)
RNA-Seq ExpressionIVF0025269
SyntenyIVF0025269
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCAGTAAAATGCTTCATGTCTACCCCTTTTGTAGATTAAAGAGAAAGGAAGTTGATCATGAAAAATTGCAAGATGAAGGAGAGAGGAGGTGTAAATCACTCAAGTTTCAGGTGTGCATGTTATTGTATGTTATTTTATTTAGTGAGTTCTGCTAAAGAAAATGGGGAATGCTTTTATGTGATGAATTTATCAATTAAACTGCACCGTCTAGTCGTGGGTAAGATTTTGTAAAGAGATTTATATAATGCTTTAGTAGATGTAGATTGCATATTGTACATCTGTAGAGATTTTGAACTTGGAGAATAATAAACTGAGGGTTCTCCGTGTCCTCAAATAGAACAATGAGATTTATCTTAGTATAATAGGAGTTTCACGAATTGTAAAATATGTAACATTCTTGATATTTGTGATCCAGCTTAAAGCTGCAGGAATTAAACAAAGAACAAGAGAGCCTAATAGATTTTTCTTTGAGGAGAGAGATCGAAGAGAAATCGAGGATCGTAATCTGCGGAAGAAAAGCTTCAGGTGAGGCTACCTTCAATCTAGTCAGCTTCTTTTTTTTCCTGCTTATTTGCATTTCATGTACAATAAAATTGTGTGGTCTCTCTGACTCTGGGCAACTACAGGAAGCATCTAACACTATCCAAGAACTGCAGGACAAGATCAAAATTCTAG

mRNA sequence

ATGCCCAGTAAAATGCTTCATGTCTACCCCTTTTGTAGATTAAAGAGAAAGGAAGTTGATCATGAAAAATTGCAAGATGAAGGAGAGAGGAGGTGTAAATCACTCAAGTTTCAGCTTAAAGCTGCAGGAATTAAACAAAGAACAAGAGAGCCTAATAGATTTTTCTTTGAGGAGAGAGATCGAAGAGAAATCGAGGATCGTAATCTGCGGAAGAAAAGCTTCAGGAAGCATCTAACACTATCCAAGAACTGCAGGACAAGATCAAAATTCTAG

Coding sequence (CDS)

ATGCCCAGTAAAATGCTTCATGTCTACCCCTTTTGTAGATTAAAGAGAAAGGAAGTTGATCATGAAAAATTGCAAGATGAAGGAGAGAGGAGGTGTAAATCACTCAAGTTTCAGCTTAAAGCTGCAGGAATTAAACAAAGAACAAGAGAGCCTAATAGATTTTTCTTTGAGGAGAGAGATCGAAGAGAAATCGAGGATCGTAATCTGCGGAAGAAAAGCTTCAGGAAGCATCTAACACTATCCAAGAACTGCAGGACAAGATCAAAATTCTAG

Protein sequence

MPSKMLHVYPFCRLKRKEVDHEKLQDEGERRCKSLKFQLKAAGIKQRTREPNRFFFEERDRREIEDRNLRKKSFRKHLTLSKNCRTRSKF
Homology
[Close]
BLAST of IVF0025269 vs. ExPASy TrEMBL
Match: A0A1S3CLE0 (protein MICRORCHIDIA 7 OS=Cucumis melo OX=3656 GN=LOC103502300 PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 7.0e-09
Identity = 43/65 (66.15%), Postives = 48/65 (73.85%), Query Frame = 0 

Query: 13  RLKRKEVDHEKLQDEGERRCKSLKFQLKAAGIK--QRTREPNR---FFFEERDRREIEDR 72
           RLKRKE DHEKLQDE ERRCKSL+ QLKAA +K  +  +E       F EERDRRE E+R
Sbjct: 736 RLKRKEADHEKLQDERERRCKSLESQLKAAELKIEELNKEQESLIDIFSEERDRRETEER 795

[Close]
BLAST of IVF0025269 vs. ExPASy TrEMBL
Match: A0A0A0LTZ4 (Morc6_S5 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G001330 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.6e-07
Identity = 40/65 (61.54%), Postives = 46/65 (70.77%), Query Frame = 0 

Query: 13  RLKRKEVDHEKLQDEGERRCKSLKFQLKAAGIK--QRTREPNR---FFFEERDRREIEDR 72
           RLKRKE DH KLQDE ERRCKSL+ QL AA +K  + ++E       F EERDRRE E+ 
Sbjct: 442 RLKRKEADHGKLQDERERRCKSLESQLTAAELKIEELSKEQESLIDIFSEERDRRETEEH 501

[Close]
BLAST of IVF0025269 vs. NCBI nr
Match: XP_008464402.1 (PREDICTED: protein MICRORCHIDIA 7 [Cucumis melo])

HSP 1 Score: 69.3 bits (168), Expect = 2.63e-11
Identity = 44/67 (65.67%), Postives = 48/67 (71.64%), Query Frame = 0 

Query: 13  RLKRKEVDHEKLQDEGERRCKSLKFQLKAAGIKQRTREPNR-------FFFEERDRREIE 72
           RLKRKE DHEKLQDE ERRCKSL+ QLKAA +K    E N+        F EERDRRE E
Sbjct: 736 RLKRKEADHEKLQDERERRCKSLESQLKAAELK--IEELNKEQESLIDIFSEERDRRETE 795

[Close]
BLAST of IVF0025269 vs. NCBI nr
Match: XP_011650392.1 (protein MICRORCHIDIA 7 [Cucumis sativus] >KAE8652377.1 hypothetical protein Csa_013567 [Cucumis sativus])

HSP 1 Score: 62.0 bits (149), Expect = 9.84e-09
Identity = 40/65 (61.54%), Postives = 46/65 (70.77%), Query Frame = 0 

Query: 13  RLKRKEVDHEKLQDEGERRCKSLKFQLKAAGIK--QRTREPNRF---FFEERDRREIEDR 72
           RLKRKE DH KLQDE ERRCKSL+ QL AA +K  + ++E       F EERDRRE E+ 
Sbjct: 736 RLKRKEADHGKLQDERERRCKSLESQLTAAELKIEELSKEQESLIDIFSEERDRRETEEH 795

[Close]
BLAST of IVF0025269 vs. NCBI nr
Match: XP_038879188.1 (protein MICRORCHIDIA 7 [Benincasa hispida])

HSP 1 Score: 57.8 bits (138), Expect = 3.05e-07
Identity = 40/67 (59.70%), Postives = 46/67 (68.66%), Query Frame = 0 

Query: 13  RLKRKEVDHEKLQDEGERRCKSLKFQLKAAGIKQRTREPNR-------FFFEERDRREIE 72
           RL+RKE DHEKL+ E ER CKSL+ QLKAA +K    E N+        F EERDRRE E
Sbjct: 737 RLQRKEADHEKLEHERER-CKSLEAQLKAAELK--IEELNKEQESLIDIFSEERDRRETE 796

[Close]
BLAST of IVF0025269 vs. NCBI nr
Match: XP_022134652.1 (protein MICRORCHIDIA 7 [Momordica charantia])

HSP 1 Score: 50.1 bits (118), Expect = 1.57e-04
Identity = 37/67 (55.22%), Postives = 44/67 (65.67%), Query Frame = 0 

Query: 13  RLKRKEVDHEKLQDEGERRCKSLKFQLKAAGIKQRTREPNR-------FFFEERDRREIE 72
           RL+RK VD  +LQ E +R CKSL+ QLKAA +K    E N+        F EERDRRE E
Sbjct: 743 RLQRKGVDDNELQQERDR-CKSLEAQLKAAELK--IEELNKEQESLIDIFSEERDRRETE 802

The following BLAST results are available for this feature:
BLAST of IVF0025269 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0025269 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CLE07.0e-0966.15protein MICRORCHIDIA 7 OS=Cucumis melo OX=3656 GN=LOC103502300 PE=3 SV=1[more]
A0A0A0LTZ46.6e-0761.54Morc6_S5 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G001330 PE... [more]
BLAST of IVF0025269 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008464402.12.63e-1165.67PREDICTED: protein MICRORCHIDIA 7 [Cucumis melo][more]
XP_011650392.19.84e-0961.54protein MICRORCHIDIA 7 [Cucumis sativus] >KAE8652377.1 hypothetical protein Csa_... [more]
XP_038879188.13.05e-0759.70protein MICRORCHIDIA 7 [Benincasa hispida][more]
XP_022134652.11.57e-0455.22protein MICRORCHIDIA 7 [Momordica charantia][more]
BLAST of IVF0025269 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0025269.1IVF0025269.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048584 positive regulation of response to stimulus
molecular_function GO:0004518 nuclease activity