IVF0025268 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTTCGACGTTGGTCGTGGGTTTGCGGCATGTTCTAACATTTTGACGTCTATTGGAGTCGGTTTAGTCGACTTTCATGGGTTTAGCCGCAAGCAAGACGAAAATCCAAAAGTCTCCGGTCAGAGGAGCCGACAAGAAGAAAATCCAAGTATGAAGACTTTGAAAGGTTGA ATGGCGTTCGACGTTGGTCGTGGGTTTGCGGCATGTTCTAACATTTTGACGTCTATTGGAGTCGGTTTAGTCGACTTTCATGGGTTTAGCCGCAAGCAAGACGAAAATCCAAAAGTCTCCGGTCAGAGGAGCCGACAAGAAGAAAATCCAAGTATGAAGACTTTGAAAGGTTGA ATGGCGTTCGACGTTGGTCGTGGGTTTGCGGCATGTTCTAACATTTTGACGTCTATTGGAGTCGGTTTAGTCGACTTTCATGGGTTTAGCCGCAAGCAAGACGAAAATCCAAAAGTCTCCGGTCAGAGGAGCCGACAAGAAGAAAATCCAAGTATGAAGACTTTGAAAGGTTGA MAFDVGRGFAACSNILTSIGVGLVDFHGFSRKQDENPKVSGQRSRQEENPSMKTLKG Homology
BLAST of IVF0025268 vs. ExPASy TrEMBL
Match: A0A5A7UB76 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1192G00160 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 5.3e-10 Identity = 42/61 (68.85%), Postives = 46/61 (75.41%), Query Frame = 0
BLAST of IVF0025268 vs. ExPASy TrEMBL
Match: A0A5D3E5H8 (Reactive Intermediate Deaminase A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00600 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 8.4e-08 Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = 0
BLAST of IVF0025268 vs. ExPASy TrEMBL
Match: A0A5A7UFX3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G002260 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 8.4e-08 Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = 0
BLAST of IVF0025268 vs. ExPASy TrEMBL
Match: A0A5D3BPV7 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2510G00390 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 5.4e-07 Identity = 36/54 (66.67%), Postives = 40/54 (74.07%), Query Frame = 0
BLAST of IVF0025268 vs. NCBI nr
Match: KAA0053193.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 72.4 bits (176), Expect = 4.44e-13 Identity = 42/61 (68.85%), Postives = 46/61 (75.41%), Query Frame = 0
BLAST of IVF0025268 vs. NCBI nr
Match: KAA0052379.1 (hypothetical protein E6C27_scaffold207G002260 [Cucumis melo var. makuwa]) HSP 1 Score: 65.9 bits (159), Expect = 1.41e-11 Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = 0
BLAST of IVF0025268 vs. NCBI nr
Match: TYK30860.1 (reactive Intermediate Deaminase A [Cucumis melo var. makuwa]) HSP 1 Score: 65.9 bits (159), Expect = 2.27e-11 Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = 0
BLAST of IVF0025268 vs. NCBI nr
Match: TYK00149.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 62.0 bits (149), Expect = 2.37e-09 Identity = 36/54 (66.67%), Postives = 40/54 (74.07%), Query Frame = 0
BLAST of IVF0025268 vs. NCBI nr
Match: TYK11141.1 (putative mitochondrial protein [Cucumis melo var. makuwa]) HSP 1 Score: 50.1 bits (118), Expect = 4.19e-05 Identity = 24/34 (70.59%), Postives = 29/34 (85.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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