IVF0025218 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGACGGAGGGCGGCTGGGCGTCGACAGACACGGTCGGACGAAGGGTGCACGGCGGCGATTGGTTGCGTGAGACCGAGAGGGCGATCGAAAATGACGCGGCCGCGACGGTTGTACGCTGGCGTTGTGAAACCGACGACGACGGAGACGGAGACTGACGACCACCACAGAGAAGGAGACAGAGACGGACGAGCTTGCGAGTGGAATAGAAATAGATGA ATGCGACGGAGGGCGGCTGGGCGTCGACAGACACGGTCGGACGAAGGGTGCACGGCGGCGATTGGTTGCGTGAGACCGAGAGGGCGATCGAAAATGACGCGGCCGCGACGGTTGTACGCTGGCGTTGTGAAACCGACGACGACGGAGACGGAGACTGACGACCACCACAGAGAAGGAGACAGAGACGGACGAGCTTGCGAGTGGAATAGAAATAGATGA ATGCGACGGAGGGCGGCTGGGCGTCGACAGACACGGTCGGACGAAGGGTGCACGGCGGCGATTGGTTGCGTGAGACCGAGAGGGCGATCGAAAATGACGCGGCCGCGACGGTTGTACGCTGGCGTTGTGAAACCGACGACGACGGAGACGGAGACTGACGACCACCACAGAGAAGGAGACAGAGACGGACGAGCTTGCGAGTGGAATAGAAATAGATGA MRRRAAGRRQTRSDEGCTAAIGCVRPRGRSKMTRPRRLYAGVVKPTTTETETDDHHREGDRDGRACEWNRNR Homology
BLAST of IVF0025218 vs. ExPASy TrEMBL
Match: A0A5D3BG73 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold565G00050 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 8.1e-16 Identity = 46/63 (73.02%), Postives = 51/63 (80.95%), Query Frame = 0
BLAST of IVF0025218 vs. ExPASy TrEMBL
Match: E5GCG0 (NBS-LRR type resistance protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.4e-15 Identity = 52/78 (66.67%), Postives = 57/78 (73.08%), Query Frame = 0
BLAST of IVF0025218 vs. ExPASy TrEMBL
Match: A0A5A7V558 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold508G00220 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 6.9e-07 Identity = 37/59 (62.71%), Postives = 41/59 (69.49%), Query Frame = 0
BLAST of IVF0025218 vs. ExPASy TrEMBL
Match: A0A5A7SPB4 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold340G00420 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.4e-04 Identity = 27/32 (84.38%), Postives = 28/32 (87.50%), Query Frame = 0
BLAST of IVF0025218 vs. NCBI nr
Match: TYJ98074.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa]) HSP 1 Score: 94.7 bits (234), Expect = 2.70e-23 Identity = 46/63 (73.02%), Postives = 51/63 (80.95%), Query Frame = 0
BLAST of IVF0025218 vs. NCBI nr
Match: ADN34159.1 (NBS-LRR type resistance protein [Cucumis melo subsp. melo]) HSP 1 Score: 94.7 bits (234), Expect = 3.50e-21 Identity = 47/63 (74.60%), Postives = 52/63 (82.54%), Query Frame = 0
BLAST of IVF0025218 vs. NCBI nr
Match: KAA0063392.1 (hypothetical protein E6C27_scaffold508G00220 [Cucumis melo var. makuwa]) HSP 1 Score: 65.1 bits (157), Expect = 2.20e-10 Identity = 37/59 (62.71%), Postives = 41/59 (69.49%), Query Frame = 0
BLAST of IVF0025218 vs. NCBI nr
Match: KAA0032378.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK31650.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]) HSP 1 Score: 54.7 bits (130), Expect = 1.21e-06 Identity = 27/32 (84.38%), Postives = 28/32 (87.50%), Query Frame = 0
BLAST of IVF0025218 vs. NCBI nr
Match: KAA0042021.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa]) HSP 1 Score: 48.5 bits (114), Expect = 2.42e-04 Identity = 24/30 (80.00%), Postives = 25/30 (83.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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