IVF0025159 (gene) Melon (IVF77) v1

Overview
NameIVF0025159
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr12: 1797519 .. 1800960 (-)
RNA-Seq ExpressionIVF0025159
SyntenyIVF0025159
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCATTTTCATTCTCCCGCTCCCCAAACCCTCAGTTCCTCGAAGCCTCCGTCCACTTCCTCTCTAATCCTCTCCGCAACTTCTTCCTTCTCAGGTATCTCCATTTCTTCTCTTACCTTTTTCTTCTCTTTTCTTGTTCTTCTATTTTACCTTCCATTTCTTTCACTCTCTTCTTCGAAACCCATTTCTCAGAATCTGCAAAAACCCGCCCATCATCCTCGCCCCCTTTTTCGTGATAGGGCAACTTTTAACTTTTCTTCTAATGGAGGTTTCTCCTCGCTGTAAAACTTGGATACCCATTTTCTTTCAACCTTTGATTTTCTTTCGGTGGGGTGGACAATATAAAAGGCGATCTCTAGTGGGTCCTTTACACCTGCAAAAAGAGATTGCTGTATACTCCTTGTTTTCTTTTTTCTTTTTTAATTTTTTTTTTTTTACTATTACTACTTTATTGGTTCTTGCATGAATGTTCTTTATACGCTGATTTTTTCCCCTCTCTATGTGCGATTTTTATTGGAAACATATTTACTGGAGAATTTGATCTTACGATGATTTATGGGAGAATTTTATTTAATGTCTTGTTTTCTTCTGGGAATGCAGTTTGTTTTTCATGATCTTTACTGGAGTGGAGATTATTAGCATCTGAATTTGTTTTCCTTTGTGCTTAATTAATTAGTTTAAATAGTGATTAGTATCTTCTTTTGGTACTTGGTAGATTTTGACACAAAGGAGCTTTTAGTGCATGATTATTGAAACTATGTTCTGCTGCTCTCTAATACTGTAAATGTGATCTTGTTTCATTTCAATTGTTAATGATACTTCTTAAAGGCAGGCGTTGGAGGTGGAAAGTGTTATTTTGTTGCTGACTTTTAAGTTAATTGTCAAATATTATGCTATTCATTTGATAGTCGATGCCATTCATGCTATAATCTGATAATCTGTGTTGATACTCTTGGCAACCAAGGTTGTTTTGATATTTTATTTTTCTTTAATTACCTAATAGCTTCCAAGGGTTGTTTTGTAATGTCTTGAGTTTAGGACAGGACATGTGTTCTTCCAAGGGTTGTTTATGGGAATAGTGAAGGTGTGCTAGCTCAGATGCTTGTGGATATATAAGAAGTACACACTTTAGTTTGAGAAAATTCTGTGTTCTTCCCACACTTATTGAACATGTCTAGGAAACTTGTTTGTTAGCATTATAGACATATGTTAGGCATGTTGGACTAAGGAAATATGGGTCCAGCATTTGCTGACTTTGAATTTCTTGTATGAAAATAATATATGTTTTAATAAATGCATCCTTGTTCTGCCTGTCATCGATTTTTTGAAAATAACGTGTCATTGTAATGATTCATTTTAAGTACTATTAGATTATAATCTTATAGCATACGCAATAAAATTATAGTGACTCGTATTAAGTACTGTTAGGTATATTAGAGAAGAAATTCCTCTAGTTTCAAACCTTATTTTCTTGATAAATTGTATTCACTACACATATTTGTTGAATCATATGGAAGGCCTTCCATTCTGCTGCTTTTTTTGTCCTCTTTAGTTTCATTTTGTTTTAGGAATAAGGATTGTAGGACTATATATAAAAAGTTGGATGGCAGGTAGGATTATAATTAACTAGCCAAGCTCAGAGTTCTCACTGTTAACTTTAAAGATTGGATGTGAATACTTGAATAGCAATAGATGCACAATGAAGGAAATGGATGAATTCTCAAAACTTTCGAAGTTATAGGGATGGCTCTTTGGCCTACTGTTTTTCTTGCTACCTTCTGTAATATTTAGCTTGAGAAAAATAAGATGTTTTAAGGATGAGGAGAACTCTTGGGTGGAGGTTTGAATCTTGGTTTAAGTTCAATGCCCTCCTTTTCAGTCCCCATTACCAAGAATTTGTTGTGGTCCTATTCTGTTGAATTGAAACATTTCTTTTTAGTTGTGTAGTTTGTTTTAAAACAAAACTCTGGAAACACATTTTTCATCTGATGCACGTTGCATAATGAGCTATTAATTAATCTATATCCTGCCATTATTCTCTAGATAGAGATCACGACCAGTGATGGCAGGTATTGTTCTTGGATGCAATACGAACAGTGTGCCATATATTTAGGAAAATCAAGACACTGACCTAACTCCTGCAAGAACTTGAGGATAGTGGGGCAGTGCCAAATTGGAAGAATGGACAGATTGCTTTTGGAATTTGTGATACTAATAGAGTGACGTTGCCTAATACAAAGTTCTATTTTCCCTTTTTTGGAATTTGTGATACTAATAGAGTGGCATTGCCTAATACAGAGTTCTATTTTCCCTTTTTTAGATAAAGCTTCTTCGCTTGAAGTTCATCAGAACAATACTTGTATTTCAATTAAATGATAATTGCCACATTCATTTTCTTTTGTTGATATCATATCCAGGCGTTGTTCTTCTGGACTGTTGTGGTTCTATGGGTAAAGGGCGTGTTCGTGGCATGAAGTTGGGACCGACCTCCACTATTGTGTTCAAATCTACACCACGCCAATTTACTGAGTTTGAGATTCATGATGAAGGCAATTTGGAAGATTACCAAAATGTAGATGCTAGACTTTCAATATTAGAGTTGAAAATGGCCAATATGATTTCAATCTTGGAACAAAACGGTTTCATGCAATCCAATAATCCGACTGCTAATACAAATGGAGATTTGCCATACTGTATATACAAAAATCCTGGACGTGTTTGTAGCATGAGATTACAACCAGCTTCGACTCAAGTTTTCAGATCTATCTCACATCGGAATATTCGCAATGAGGCCCGTATGGATCAAAATGTAGATACTAGACTTTCAATACTAGAGACTCAAATGACCAAGGTAGTCTCGATCTTGCGACGAAACGGTCTCATGCAAGGCAACATATGAGCAGGGATCAACCACAAAAGTTTCAAGACAGGTACAAACTCTTTTTATGTTTTATTGTCTTATTCTTCTTTCTAAGTATGATTAACCATTATTATCATGATTGCTTATTATCAGGAATGGGGAGTTAACACACAAATGATGCTCACATGTTCATGAAGTCAACTCAGCATCATCTTTCATGATATTTTAGTCTTATGTAAGGGTGAAAACAATTTGAGTTCCTAACTTTAGGGTTAAATATTGGTATTTTGTTTAGTTTATTTCTTTTTGGGATGACATCATGTATTAGAGTATCGTCTATTTTCAACCATTTTTTGTGTTGAAACTATCTCATAGATGGTAGTATTAGGAGAAGGTATTCTTTAGAAATGACCTTTAAAATTGGCGACATGACTTCAAAATCATATATTAAAAAGAAAACTCTTATTTTATTGTTTCTTGAAAATATGGGTTCATGTCCATCATACTTTAACATTTTTTCCGCAATGTAAATGACAACTGTTGTCACTTAGGAAGTGTTTGGTGGTTCCTAATGGAATTGGGG

mRNA sequence

GTCATTTTCATTCTCCCGCTCCCCAAACCCTCAGTTCCTCGAAGCCTCCGTCCACTTCCTCTCTAATCCTCTCCGCAACTTCTTCCTTCTCAGGCGTTGTTCTTCTGGACTGTTGTGGTTCTATGGGTAAAGGGCGTGTTCGTGGCATGAAGTTGGGACCGACCTCCACTATTGTGTTCAAATCTACACCACGCCAATTTACTGAGTTTGAGATTCATGATGAAGGCAATTTGGAAGATTACCAAAATGTAGATGCTAGACTTTCAATATTAGAGTTGAAAATGGCCAATATGATTTCAATCTTGGAACAAAACGGTTTCATGCAATCCAATAATCCGACTGCTAATACAAATGGAGATTTGCCATACTGTATATACAAAAATCCTGGACGTGTTTGTAGCATGAGATTACAACCAGCTTCGACTCAAGTTTTCAGATCTATCTCACATCGGAATATTCGCAATGAGGCCCGTATGGATCAAAATGTAGATACTAGACTTTCAATACTAGAGACTCAAATGACCAAGGTAGTCTCGATCTTGCGACGAAACGGTCTCATGCAAGGCAACATATGAGCAGGGATCAACCACAAAAGTTTCAAGACAGGAATGGGGAGTTAACACACAAATGATGCTCACATGTTCATGAAGTCAACTCAGCATCATCTTTCATGATATTTTAGTCTTATGTAAGGGTGAAAACAATTTGAGTTCCTAACTTTAGGGTTAAATATTGGTATTTTGTTTAGTTTATTTCTTTTTGGGATGACATCATGTATTAGAGTATCGTCTATTTTCAACCATTTTTTGTGTTGAAACTATCTCATAGATGGTAGTATTAGGAGAAGGTATTCTTTAGAAATGACCTTTAAAATTGGCGACATGACTTCAAAATCATATATTAAAAAGAAAACTCTTATTTTATTGTTTCTTGAAAATATGGGTTCATGTCCATCATACTTTAACATTTTTTCCGCAATGTAAATGACAACTGTTGTCACTTAGGAAGTGTTTGGTGGTTCCTAATGGAATTGGGG

Coding sequence (CDS)

ATGGGTAAAGGGCGTGTTCGTGGCATGAAGTTGGGACCGACCTCCACTATTGTGTTCAAATCTACACCACGCCAATTTACTGAGTTTGAGATTCATGATGAAGGCAATTTGGAAGATTACCAAAATGTAGATGCTAGACTTTCAATATTAGAGTTGAAAATGGCCAATATGATTTCAATCTTGGAACAAAACGGTTTCATGCAATCCAATAATCCGACTGCTAATACAAATGGAGATTTGCCATACTGTATATACAAAAATCCTGGACGTGTTTGTAGCATGAGATTACAACCAGCTTCGACTCAAGTTTTCAGATCTATCTCACATCGGAATATTCGCAATGAGGCCCGTATGGATCAAAATGTAGATACTAGACTTTCAATACTAGAGACTCAAATGACCAAGGTAGTCTCGATCTTGCGACGAAACGGTCTCATGCAAGGCAACATATGA

Protein sequence

MGKGRVRGMKLGPTSTIVFKSTPRQFTEFEIHDEGNLEDYQNVDARLSILELKMANMISILEQNGFMQSNNPTANTNGDLPYCIYKNPGRVCSMRLQPASTQVFRSISHRNIRNEARMDQNVDTRLSILETQMTKVVSILRRNGLMQGNI
Homology
BLAST of IVF0025159 vs. ExPASy TrEMBL
Match: A0A5D3BE38 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002160 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 7.0e-78
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0

Query: 1   MGKGRVRGMKLGPTSTIVFKSTPRQFTEFEIHDEGNLEDYQNVDARLSILELKMANMISI 60
           MGKGRVRGMKLGPTSTIVFKSTPRQFTEFEIHDEGNLEDYQNVDARLSILELKMANMISI
Sbjct: 1   MGKGRVRGMKLGPTSTIVFKSTPRQFTEFEIHDEGNLEDYQNVDARLSILELKMANMISI 60

Query: 61  LEQNGFMQSNNPTANTNGDLPYCIYKNPGRVCSMRLQPASTQVFRSISHRNIRNEARMDQ 120
           LEQNGFMQSNNPTANTNGDLPYCIYKNPGRVCSMRLQPASTQVFRSISHRNIRNEARMDQ
Sbjct: 61  LEQNGFMQSNNPTANTNGDLPYCIYKNPGRVCSMRLQPASTQVFRSISHRNIRNEARMDQ 120

Query: 121 NVDTRLSILETQMTKVVSILRRNGLMQGNI 151
           NVDTRLSILETQMTKVVSILRRNGLMQGNI
Sbjct: 121 NVDTRLSILETQMTKVVSILRRNGLMQGNI 150

BLAST of IVF0025159 vs. ExPASy TrEMBL
Match: A0A5A7VKN2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00670 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 7.0e-78
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0

Query: 1   MGKGRVRGMKLGPTSTIVFKSTPRQFTEFEIHDEGNLEDYQNVDARLSILELKMANMISI 60
           MGKGRVRGMKLGPTSTIVFKSTPRQFTEFEIHDEGNLEDYQNVDARLSILELKMANMISI
Sbjct: 13  MGKGRVRGMKLGPTSTIVFKSTPRQFTEFEIHDEGNLEDYQNVDARLSILELKMANMISI 72

Query: 61  LEQNGFMQSNNPTANTNGDLPYCIYKNPGRVCSMRLQPASTQVFRSISHRNIRNEARMDQ 120
           LEQNGFMQSNNPTANTNGDLPYCIYKNPGRVCSMRLQPASTQVFRSISHRNIRNEARMDQ
Sbjct: 73  LEQNGFMQSNNPTANTNGDLPYCIYKNPGRVCSMRLQPASTQVFRSISHRNIRNEARMDQ 132

Query: 121 NVDTRLSILETQMTKVVSILRRNGLMQGNI 151
           NVDTRLSILETQMTKVVSILRRNGLMQGNI
Sbjct: 133 NVDTRLSILETQMTKVVSILRRNGLMQGNI 162

BLAST of IVF0025159 vs. ExPASy TrEMBL
Match: A0A0A0LUW6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G523050 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.2e-75
Identity = 148/151 (98.01%), Postives = 149/151 (98.68%), Query Frame = 0

Query: 1   MGKGRVRGMKLGPTSTIVFKSTPRQFTEFEIHDEGNLEDYQNVDARLSILELKMANMISI 60
           MGKGRVRGMKLGPTSTIVFKSTPRQFTEFEIHDE NLEDYQNVDARLSILELKMANMISI
Sbjct: 1   MGKGRVRGMKLGPTSTIVFKSTPRQFTEFEIHDEANLEDYQNVDARLSILELKMANMISI 60

Query: 61  LEQNGFMQSNNPTA-NTNGDLPYCIYKNPGRVCSMRLQPASTQVFRSISHRNIRNEARMD 120
           LEQNGFMQSNNPTA +TNGDLPYCIYKNPGRVCSMRLQPASTQVFRSISHRNIRNEARMD
Sbjct: 61  LEQNGFMQSNNPTATHTNGDLPYCIYKNPGRVCSMRLQPASTQVFRSISHRNIRNEARMD 120

Query: 121 QNVDTRLSILETQMTKVVSILRRNGLMQGNI 151
           QNVDTRLSILETQMTKVVSILRRNGLMQGNI
Sbjct: 121 QNVDTRLSILETQMTKVVSILRRNGLMQGNI 151

BLAST of IVF0025159 vs. NCBI nr
Match: TYJ97397.1 (hypothetical protein E5676_scaffold194G002160 [Cucumis melo var. makuwa])

HSP 1 Score: 298 bits (764), Expect = 5.26e-102
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0

Query: 1   MGKGRVRGMKLGPTSTIVFKSTPRQFTEFEIHDEGNLEDYQNVDARLSILELKMANMISI 60
           MGKGRVRGMKLGPTSTIVFKSTPRQFTEFEIHDEGNLEDYQNVDARLSILELKMANMISI
Sbjct: 1   MGKGRVRGMKLGPTSTIVFKSTPRQFTEFEIHDEGNLEDYQNVDARLSILELKMANMISI 60

Query: 61  LEQNGFMQSNNPTANTNGDLPYCIYKNPGRVCSMRLQPASTQVFRSISHRNIRNEARMDQ 120
           LEQNGFMQSNNPTANTNGDLPYCIYKNPGRVCSMRLQPASTQVFRSISHRNIRNEARMDQ
Sbjct: 61  LEQNGFMQSNNPTANTNGDLPYCIYKNPGRVCSMRLQPASTQVFRSISHRNIRNEARMDQ 120

Query: 121 NVDTRLSILETQMTKVVSILRRNGLMQGNI 150
           NVDTRLSILETQMTKVVSILRRNGLMQGNI
Sbjct: 121 NVDTRLSILETQMTKVVSILRRNGLMQGNI 150

BLAST of IVF0025159 vs. NCBI nr
Match: KAA0067747.1 (hypothetical protein E6C27_scaffold352G00670 [Cucumis melo var. makuwa])

HSP 1 Score: 298 bits (764), Expect = 7.95e-102
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0

Query: 1   MGKGRVRGMKLGPTSTIVFKSTPRQFTEFEIHDEGNLEDYQNVDARLSILELKMANMISI 60
           MGKGRVRGMKLGPTSTIVFKSTPRQFTEFEIHDEGNLEDYQNVDARLSILELKMANMISI
Sbjct: 13  MGKGRVRGMKLGPTSTIVFKSTPRQFTEFEIHDEGNLEDYQNVDARLSILELKMANMISI 72

Query: 61  LEQNGFMQSNNPTANTNGDLPYCIYKNPGRVCSMRLQPASTQVFRSISHRNIRNEARMDQ 120
           LEQNGFMQSNNPTANTNGDLPYCIYKNPGRVCSMRLQPASTQVFRSISHRNIRNEARMDQ
Sbjct: 73  LEQNGFMQSNNPTANTNGDLPYCIYKNPGRVCSMRLQPASTQVFRSISHRNIRNEARMDQ 132

Query: 121 NVDTRLSILETQMTKVVSILRRNGLMQGNI 150
           NVDTRLSILETQMTKVVSILRRNGLMQGNI
Sbjct: 133 NVDTRLSILETQMTKVVSILRRNGLMQGNI 162

BLAST of IVF0025159 vs. NCBI nr
Match: KGN65730.1 (hypothetical protein Csa_019939 [Cucumis sativus])

HSP 1 Score: 290 bits (741), Expect = 1.75e-98
Identity = 148/151 (98.01%), Postives = 149/151 (98.68%), Query Frame = 0

Query: 1   MGKGRVRGMKLGPTSTIVFKSTPRQFTEFEIHDEGNLEDYQNVDARLSILELKMANMISI 60
           MGKGRVRGMKLGPTSTIVFKSTPRQFTEFEIHDE NLEDYQNVDARLSILELKMANMISI
Sbjct: 1   MGKGRVRGMKLGPTSTIVFKSTPRQFTEFEIHDEANLEDYQNVDARLSILELKMANMISI 60

Query: 61  LEQNGFMQSNNPTA-NTNGDLPYCIYKNPGRVCSMRLQPASTQVFRSISHRNIRNEARMD 120
           LEQNGFMQSNNPTA +TNGDLPYCIYKNPGRVCSMRLQPASTQVFRSISHRNIRNEARMD
Sbjct: 61  LEQNGFMQSNNPTATHTNGDLPYCIYKNPGRVCSMRLQPASTQVFRSISHRNIRNEARMD 120

Query: 121 QNVDTRLSILETQMTKVVSILRRNGLMQGNI 150
           QNVDTRLSILETQMTKVVSILRRNGLMQGNI
Sbjct: 121 QNVDTRLSILETQMTKVVSILRRNGLMQGNI 151

BLAST of IVF0025159 vs. NCBI nr
Match: KAG6583423.1 (hypothetical protein SDJN03_19355, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 213 bits (542), Expect = 2.79e-68
Identity = 108/123 (87.80%), Postives = 114/123 (92.68%), Query Frame = 0

Query: 1   MGKGRVRGMKLGPTSTIVFKSTPRQFTEFEIHDEGN-LEDYQNVDARLSILELKMANMIS 60
           MGKGRVRGMKLGPT TIVFKSTPRQFTE EIH+E N +EDY+NVDARLSILELKMANM+S
Sbjct: 1   MGKGRVRGMKLGPTPTIVFKSTPRQFTEIEIHNEANNMEDYENVDARLSILELKMANMLS 60

Query: 61  ILEQNGFMQSNNPTA-NTNGDLPYCIYKNPGRVCSMRLQPASTQVFRSISHRNIRNEARM 120
           ILEQNGFMQSNN TA +TNGD PYCIYKNPGRVC M+LQP STQVFRSISHRNIRNEARM
Sbjct: 61  ILEQNGFMQSNNLTAAHTNGDSPYCIYKNPGRVCGMKLQPTSTQVFRSISHRNIRNEARM 120

BLAST of IVF0025159 vs. NCBI nr
Match: KAG7019185.1 (hypothetical protein SDJN02_18143, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 221 bits (562), Expect = 3.53e-67
Identity = 113/133 (84.96%), Postives = 121/133 (90.98%), Query Frame = 0

Query: 9   MKLGPTSTIVFKSTPRQFTEFEIHDEGN-LEDYQNVDARLSILELKMANMISILEQNGFM 68
           MKLGPT TIVFKSTPRQFTE EIH+E N +EDY+NVDARLSILELKMANM+SILEQNGFM
Sbjct: 1   MKLGPTPTIVFKSTPRQFTEIEIHNEANNMEDYENVDARLSILELKMANMLSILEQNGFM 60

Query: 69  QSNNPTA-NTNGDLPYCIYKNPGRVCSMRLQPASTQVFRSISHRNIRNEARMDQNVDTRL 128
           QSNN TA +TNGD PYCIYKNPGRVC M+LQP STQVFRSISHRNIRNEARMDQNVDTRL
Sbjct: 61  QSNNLTAAHTNGDSPYCIYKNPGRVCGMKLQPTSTQVFRSISHRNIRNEARMDQNVDTRL 120

Query: 129 SILETQMTKVVSI 139
           SILE QMTK + +
Sbjct: 121 SILEAQMTKELGV 133

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BE387.0e-78100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VKN27.0e-78100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0LUW63.2e-7598.01Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G523050 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
TYJ97397.15.26e-102100.00hypothetical protein E5676_scaffold194G002160 [Cucumis melo var. makuwa][more]
KAA0067747.17.95e-102100.00hypothetical protein E6C27_scaffold352G00670 [Cucumis melo var. makuwa][more]
KGN65730.11.75e-9898.01hypothetical protein Csa_019939 [Cucumis sativus][more]
KAG6583423.12.79e-6887.80hypothetical protein SDJN03_19355, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7019185.13.53e-6784.96hypothetical protein SDJN02_18143, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0025159.1IVF0025159.1mRNA