IVF0025100 (gene) Melon (IVF77) v1

Overview
NameIVF0025100
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr12: 1702820 .. 1705979 (+)
RNA-Seq ExpressionIVF0025100
SyntenyIVF0025100
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATGGTCTTTCTTCTTTCCCTTCTTTGTTTTCTGCTGCAATTTGTTTCCATCATATTTTTTCTTTTCCTCTTCTTTTTCTTTCTGTATCGATTTCTTTCAATTGTCTTTCTTCTTTTTTATTTTTTTTACGTCGTTTGAATCATCAACCCAACCGACCTGAAAATATAAGATGGATTGAGAATATCCTTCCACCCGACCCGTTTATATTTGTAATCCAAATATTCAAATGGGACTAAAAAGTTATCCCTAACCCGTAAGGGCCGGCCCAACCCACAAGACATTTAATTTCTTTTGAAATTTAGTATACTACATTTTCCCGCTAAATTTCTACTACTGACAGCGCAAAATCCCACGTGGGAATATAAGAACACGCCACGTAGATCAAAGCCTCTTCAAATGTTGACACGTGGGTCGAAACATACAACACCATATATAGGCTGTTCCTCTTCCTTCTAAAACTCACAAAAATCTCTTCAACTTTTTCACTCTCAATTTTTCATATACTTTAATTTCTCCCAATGGACGGCTTTCGTACTCCTGAGCGACCAGAGTTTCGGATTCCACCGGCATCGTTGCCACCACCGCCGAGGAAGAAGCCAGTTGTCGTAGTGAAGAAGATGCGTGAGGCGGTGGCAGAGAATAATGGTTATTTTCAACTACCTGCTGACGATCTTGAACGATTCTTTCTCTGTTATTCCCATCGGTAGCTTTCGTTGCTTGGAGCCGTCGTTAACGGAAGCTTCACCTGAATCATTTGTCTAAACATATTTTTGTTTTTGATTTGGCATAGACTATCATGATCATATTATTAAATTTCTATCCATACGTCTATATATATTTTTATGTTTCCATACAATCAAAATATTAAAAGGAAGGTTCAATCCATATTTTTCTTATAATATCATAGTCTCATAGAGAACTTCTCAAAAACACAACAAAAATAATGACTACACACTTACTTATTGGAAGAAAAATGATAAAATGTTTATTTACAAATTCAATTTTAATCTATATTAAAGTTCTACATTCTATCAATATTTTCAAAACGCCAAACTTCCCATCATTTCAAGTAAGATAGAAGCAATGATCAAAGTATCATCTTATTTCCATCCAAAATCTATTTGAAACAGGAAGCCTTAAATAGGATCGTCGTCTAATTAAAACAACTCAAATTTTCTTTCAATAATAACAATTTAATATTAAACTTAGAAGGCCTGACAATAAAAAGTTTACTATTAAAATTTAATACTAAACTTAAATACTAACTCAATAGAAGCTTTAATATTACATGGTCATTCAATAAAAAAAGAACTTTTAAGACAACGTGAAAAGCCTAAAAATATTTTTAAAATATTGAAAATTTTCGCCTAAAACATTCTCAAAATAATAAAATTACATCAACATTTGATAATGTGAAAGGGATATGATTTTGAAGATAATTGTCTTAAAGTTTTATATTATAATTGAGTATGAATTGGGTTTAGGGCAACGAAATAACGTTGGTATTTACTAATAGTTGGATGATAAGATGTGTGGATAGATAAGTGTCTACTAAAATGGCCAACTTTTATAGGTTAATATAATAGAGATAAAAAGTTCAATTTTATAAGTTACATTCAATTTCATTCCCTCCTTAGCTCTAAACCAAGTATTTTTATTAATTTTAAATTAAAATATGTATATACAAAGAAAATGTTTAGCTTACATTTACTCTGTTTACTAATTATAATTAAAAATTGATGTAATTGTAATTAGTTTTACCTAATATTTGACCTGCAGTTGTTAACCCAGTAATTGTAAGGATAAAAATGTTAAAATTGAAACTTTTATTTAAAAGTGCAACAATAATTAAAAGTTAAAAAGACTATAAGGTGTAAATTTCGGATGCAATTGGCAATCACTCTCTGCTTATCAAATATCAACGATTATAAGGTTTAGTTTTACTATTCTAGTGAGTCACTGTTTTCTATAATCTTTCAACAAGAAAATGAATTTCTTCTATTTTCTACACTCCTCCGAATCAATAAAGTCACCATGCAATTCAAAATGTTAGAACTAACCACAACATATAGCGAGGAAAAAAAAAAACTAACTCAAAAGCAAAAAAACTAACTCAAAAGTTAGAACTCTCTGCAACATATATAGCAAAAAAAACTCACTCAAAAGCAAACTAGAAAGGGATGAATTTTGTTATATTTTGAATATAGTTTAAATATTTTGAAATTTTTAAAGATTTCTCTTAAATAATCTTCTCTTTTTTTTTTCTGTTTTTTTTTCTCTTCATAATTTCCTAAAATAAAAAAATTCATTAATATCACCATCCATAATTTAATACCTCAAAAGTTTATAGCAATTGGTTTAATAGGGATTAAACTAGAGAAGTGTACATATTTGTTATGTTGTATATGAGAGTATATTCTTGCTACTCACAAGGCCTCCCAACTTATCATATATATTTATTTGGGCATCCCTTGCTTGTTACAATCACAATAACCTTCTAAGAACTACAGAATATGCTACGAGTCCACATCTCTTCTTTTTTCTTTTTCTTTTTTCTTTTTCCCATAAATATGATTTCATTAAGAAGAAGGAAGGAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGGCATATCATCTTTGTGATGCTACAAGATTCAAATTAGAGATGAAGCAAATTTTTAAATTAGAAGAAATTGAGTCTTGGCTGCATTTGATTTGGATATCTCTTACATGATTTGGAATCAAATTTACAATCTCTAAATTTCTAGTTGATATCTATTACTACATTAACATTATTATTTTATGATATCAATATTTCTTATGTGGTCTTTAGATGTATTTTTCTTCTTCTTCAAAATGAAATAAAATAAAAAAGGGGGAGAATGTTGATTTACAAATCTGTCTTTTTGAAAGAATTCATACATTAATCATGGCTTGCCCAAAAGCTGCTGACACTGTCTTATTATTATTATTATTATTATCATTACTATCATTATTATTACTACTACTACTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATCATTATCATTGTTATTACTACTACTACTATTACTATATTATTATTATTACTATTACTATTATTATTATTATTATTATTA

mRNA sequence

CATGGTCTTTCTTCTTTCCCTTCTTTGTTTTCTGCTGCAATTTGTTTCCATCATATTTTTTCTTTTCCTCTTCTTTTTCTTTCTGTATCGATTTCTTTCAATTGTCTTTCTTCTTTTTTATTTTTTTTACGTCGTTTGAATCATCAACCCAACCGACCTGAAAATATAAGATGGATTGAGAATATCCTTCCACCCGACCCGTTTATATTTGTAATCCAAATATTCAAATGGGACTAAAAAGTTATCCCTAACCCGTAAGGGCCGGCCCAACCCACAAGACATTTAATTTCTTTTGAAATTTAGTATACTACATTTTCCCGCTAAATTTCTACTACTGACAGCGCAAAATCCCACGTGGGAATATAAGAACACGCCACGTAGATCAAAGCCTCTTCAAATGTTGACACGTGGGTCGAAACATACAACACCATATATAGGCTGTTCCTCTTCCTTCTAAAACTCACAAAAATCTCTTCAACTTTTTCACTCTCAATTTTTCATATACTTTAATTTCTCCCAATGGACGGCTTTCGTACTCCTGAGCGACCAGAGTTTCGGATTCCACCGGCATCGTTGCCACCACCGCCGAGGAAGAAGCCAGTTGTCGTAGTGAAGAAGATGCGTGAGGCGGTGGCAGAGAATAATGGTTATTTTCAACTACCTGCTGACGATCTTGAACGATTCTTTCTCTGTTATTCCCATCGGTAGCTTTCGTTGCTTGGAGCCGTCGTTAACGGAAGCTTCACCTGAATCATTTGTCTAAACATATTTTTGTTTTTGATTTGGCATAGACTATCATGATCATATTATTAAATTTCTATCCATACGTCTATATATATTTTTATGTTTCCATACAATCAAAATATTAAAAGGAAGGTTCAATCCATATTTTTCTTATAATATCATAGTCTCATAGAGAACTTCTCAAAAACACAACAAAAATAATGACTACACACTTACTTATTGGAAGAAAAATGATAAAATGTTTATTTACAAATTCAATTTTAATCTATATTAAAGTTCTACATTCTATCAATATTTTCAAAACGCCAAACTTCCCATCATTTCAAGTAAGATAGAAGCAATGATCAAAGTATCATCTTATTTCCATCCAAAATCTATTTGAAACAGGAAGCCTTAAATAGGATCGTCGTCTAATTAAAACAACTCAAATTTTCTTTCAATAATAACAATTTAATATTAAACTTAGAAGGCCTGACAATAAAAAGTTTACTATTAAAATTTAATACTAAACTTAAATACTAACTCAATAGAAGCTTTAATATTACATGGTCATTCAATAAAAAAAGAACTTTTAAGACAACGTGAAAAGCCTAAAAATATTTTTAAAATATTGAAAATTTTCGCCTAAAACATTCTCAAAATAATAAAATTACATCAACATTTGATAATGTGAAAGGGATATGATTTTGAAGATAATTGTCTTAAAGTTTTATATTATAATTGAGTATGAATTGGGTTTAGGGCAACGAAATAACGTTGGTATTTACTAATAGTTGGATGATAAGATGTGTGGATAGATAAGTGTCTACTAAAATGGCCAACTTTTATAGGTTAATATAATAGAGATAAAAAGTTCAATTTTATAAGTTACATTCAATTTCATTCCCTCCTTAGCTCTAAACCAAGTATTTTTATTAATTTTAAATTAAAATATGTATATACAAAGAAAATGTTTAGCTTACATTTACTCTGTTTACTAATTATAATTAAAAATTGATGTAATTGTAATTAGTTTTACCTAATATTTGACCTGCAGTTGTTAACCCAGTAATTGTAAGGATAAAAATGTTAAAATTGAAACTTTTATTTAAAAGTGCAACAATAATTAAAAGTTAAAAAGACTATAAGGTGTAAATTTCGGATGCAATTGGCAATCACTCTCTGCTTATCAAATATCAACGATTATAAGGTTTAGTTTTACTATTCTAGTGAGTCACTGTTTTCTATAATCTTTCAACAAGAAAATGAATTTCTTCTATTTTCTACACTCCTCCGAATCAATAAAGTCACCATGCAATTCAAAATGTTAGAACTAACCACAACATATAGCGAGGAAAAAAAAAAACTAACTCAAAAGCAAAAAAACTAACTCAAAAGTTAGAACTCTCTGCAACATATATAGCAAAAAAAACTCACTCAAAAGCAAACTAGAAAGGGATGAATTTTGTTATATTTTGAATATAGTTTAAATATTTTGAAATTTTTAAAGATTTCTCTTAAATAATCTTCTCTTTTTTTTTTCTGTTTTTTTTTCTCTTCATAATTTCCTAAAATAAAAAAATTCATTAATATCACCATCCATAATTTAATACCTCAAAAGTTTATAGCAATTGGTTTAATAGGGATTAAACTAGAGAAGTGTACATATTTGTTATGTTGTATATGAGAGTATATTCTTGCTACTCACAAGGCCTCCCAACTTATCATATATATTTATTTGGGCATCCCTTGCTTGTTACAATCACAATAACCTTCTAAGAACTACAGAATATGCTACGAGTCCACATCTCTTCTTTTTTCTTTTTCTTTTTTCTTTTTCCCATAAATATGATTTCATTAAGAAGAAGGAAGGAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGGCATATCATCTTTGTGATGCTACAAGATTCAAATTAGAGATGAAGCAAATTTTTAAATTAGAAGAAATTGAGTCTTGGCTGCATTTGATTTGGATATCTCTTACATGATTTGGAATCAAATTTACAATCTCTAAATTTCTAGTTGATATCTATTACTACATTAACATTATTATTTTATGATATCAATATTTCTTATGTGGTCTTTAGATGTATTTTTCTTCTTCTTCAAAATGAAATAAAATAAAAAAGGGGGAGAATGTTGATTTACAAATCTGTCTTTTTGAAAGAATTCATACATTAATCATGGCTTGCCCAAAAGCTGCTGACACTGTCTTATTATTATTATTATTATTATCATTACTATCATTATTATTACTACTACTACTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATCATTATCATTGTTATTACTACTACTACTATTACTATATTATTATTATTACTATTACTATTATTATTATTATTATTATTA

Coding sequence (CDS)

ATGGACGGCTTTCGTACTCCTGAGCGACCAGAGTTTCGGATTCCACCGGCATCGTTGCCACCACCGCCGAGGAAGAAGCCAGTTGTCGTAGTGAAGAAGATGCGTGAGGCGGTGGCAGAGAATAATGGTTATTTTCAACTACCTGCTGACGATCTTGAACGATTCTTTCTCTGTTATTCCCATCGGTAG

Protein sequence

MDGFRTPERPEFRIPPASLPPPPRKKPVVVVKKMREAVAENNGYFQLPADDLERFFLCYSHR
Homology
[Close]
BLAST of IVF0025100 vs. ExPASy TrEMBL
Match: A0A5A7VKP1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00780 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.3e-26
Identity = 60/62 (96.77%), Postives = 60/62 (96.77%), Query Frame = 0 

Query: 1  MDGFRTPERPEFRIPPASLPPPPRKKPVVVVKKMREAVAENNGYFQLPADDLERFFLCYS 60
          MDGFRTPERPEFRIPPASLPPPPRKKPVVVVKKMREAV ENNGYFQLPADDLERFFLC S
Sbjct: 1  MDGFRTPERPEFRIPPASLPPPPRKKPVVVVKKMREAVPENNGYFQLPADDLERFFLCCS 60

Query: 61 HR 63
          HR
Sbjct: 61 HR 62

[Close]
BLAST of IVF0025100 vs. NCBI nr
Match: KAA0067757.1 (hypothetical protein E6C27_scaffold352G00780 [Cucumis melo var. makuwa])

HSP 1 Score: 127 bits (318), Expect = 9.50e-37
Identity = 60/62 (96.77%), Postives = 60/62 (96.77%), Query Frame = 0 

Query: 1  MDGFRTPERPEFRIPPASLPPPPRKKPVVVVKKMREAVAENNGYFQLPADDLERFFLCYS 60
          MDGFRTPERPEFRIPPASLPPPPRKKPVVVVKKMREAV ENNGYFQLPADDLERFFLC S
Sbjct: 1  MDGFRTPERPEFRIPPASLPPPPRKKPVVVVKKMREAVPENNGYFQLPADDLERFFLCCS 60

Query: 61 HR 62
          HR
Sbjct: 61 HR 62

[Close]
BLAST of IVF0025100 vs. NCBI nr
Match: KAG7036940.1 (Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 70.1 bits (170), Expect = 4.26e-14
Identity = 37/57 (64.91%), Postives = 42/57 (73.68%), Query Frame = 0 

Query: 1  MDGFRTPERPEFRIPPASLPPPPRKKPVVVVKKMREAVAENNGYFQLPADDLERFFL 57
          M+G+RTPER EFRI PA +PPPP +K  V   K REA A  NGYFQLP DDLE +FL
Sbjct: 1  MEGYRTPERQEFRIQPAKVPPPPPRKKAVAAAKKREAPA--NGYFQLP-DDLEVYFL 54

[Close]
BLAST of IVF0025100 vs. NCBI nr
Match: KAG6607256.1 (Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 70.1 bits (170), Expect = 4.26e-14
Identity = 37/57 (64.91%), Postives = 42/57 (73.68%), Query Frame = 0 

Query: 1  MDGFRTPERPEFRIPPASLPPPPRKKPVVVVKKMREAVAENNGYFQLPADDLERFFL 57
          M+G+RTPER EFRI PA +PPPP +K  V   K REA A  NGYFQLP DDLE +FL
Sbjct: 1  MEGYRTPERQEFRIQPAKVPPPPPRKKAVAAAKKREAPA--NGYFQLP-DDLEVYFL 54

[Close]
BLAST of IVF0025100 vs. NCBI nr
Match: KAF8022732.1 (hypothetical protein BT93_F0293 [Corymbia citriodora subsp. variegata])

HSP 1 Score: 51.6 bits (122), Expect = 1.14e-06
Identity = 33/56 (58.93%), Postives = 34/56 (60.71%), Query Frame = 0 

Query: 2  DGFRTPERPEFRIPPASLPPPP-RKKPVVVVKKMREAVAENNGYFQLPADDLERFF 56
          DG  TP R EFRIP AS PPPP RKKP+   KK        NGYFQ P DDLE  F
Sbjct: 20 DGCSTPTRGEFRIPAASAPPPPPRKKPLCGGKKRGPP---KNGYFQAP-DDLELLF 71

[Close]
BLAST of IVF0025100 vs. NCBI nr
Match: CAA7389719.1 (unnamed protein product [Spirodela intermedia])

HSP 1 Score: 47.8 bits (112), Expect = 3.21e-05
Identity = 29/56 (51.79%), Postives = 34/56 (60.71%), Query Frame = 0 

Query: 2  DGFRTPERPEFRIPPA-SLPPPPRKKPVVVVKKMREAVAENNGYFQLPADDLERFF 56
          +G+ TP+R E RIP   + PPPPRKKPVV  K+        NGYFQ P  DLE  F
Sbjct: 11 EGWETPKRVECRIPVVFACPPPPRKKPVVFTKRREPP---KNGYFQPP--DLEALF 61

[Close]
BLAST of IVF0025100 vs. TAIR 10
Match: AT5G02220.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 2.1e-04
Identity = 29/62 (46.77%), Postives = 34/62 (54.84%), Query Frame = 0 

Query: 2  DGFRTPERPEFRIPPASL-PPPPRKKPVVVVKKMREAVAENNGYFQLPADDLERFFLCYS 61
          +G  TP    +RIP AS+ PPPPRKK +VV    R+     NGYFQ P  DLE  F    
Sbjct: 13 EGCTTPRSTMYRIPVASVCPPPPRKKLMVV----RKRDPPRNGYFQPP--DLETLFYAQP 68

Query: 62 HR 63
           R
Sbjct: 73 RR 68

The following BLAST results are available for this feature:
BLAST of IVF0025100 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0025100 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VKP13.3e-2696.77Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of IVF0025100 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0067757.19.50e-3796.77hypothetical protein E6C27_scaffold352G00780 [Cucumis melo var. makuwa][more]
KAG7036940.14.26e-1464.91Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma ... [more]
KAG6607256.14.26e-1464.91Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma ... [more]
KAF8022732.11.14e-0658.93hypothetical protein BT93_F0293 [Corymbia citriodora subsp. variegata][more]
CAA7389719.13.21e-0551.79unnamed protein product [Spirodela intermedia][more]
BLAST of IVF0025100 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G02220.12.1e-0446.77unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0025100.1IVF0025100.1mRNA