IVF0025085 (gene) Melon (IVF77) v1

Overview
NameIVF0025085
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr05: 19590461 .. 19590652 (+)
RNA-Seq ExpressionIVF0025085
SyntenyIVF0025085
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTTCTGCAAGGAGGAGAAGGAATTGGGTCGGCGGCAGGCGACGGGCACGTGCCCGTCATGTGGGGGCAAAGTTCAAGCTGTGGATGTGGAGAGAAAATGGAGGCTCTGTTTTGTTCCACTCTGTTTCAAAATCAAGAGGAAATATTACTGTCTAATGTGTGGTCGTCGTTTGGAGTTGTATCATTAG

mRNA sequence

ATGTTGTTCTGCAAGGAGGAGAAGGAATTGGGTCGGCGGCAGGCGACGGGCACGTGCCCGTCATGTGGGGGCAAAGTTCAAGCTGTGGATGTGGAGAGAAAATGGAGGCTCTGTTTTGTTCCACTCTGTTTCAAAATCAAGAGGAAATATTACTGTCTAATGTGTGGTCGTCGTTTGGAGTTGTATCATTAG

Coding sequence (CDS)

ATGTTGTTCTGCAAGGAGGAGAAGGAATTGGGTCGGCGGCAGGCGACGGGCACGTGCCCGTCATGTGGGGGCAAAGTTCAAGCTGTGGATGTGGAGAGAAAATGGAGGCTCTGTTTTGTTCCACTCTGTTTCAAAATCAAGAGGAAATATTACTGTCTAATGTGTGGTCGTCGTTTGGAGTTGTATCATTAG

Protein sequence

MLFCKEEKELGRRQATGTCPSCGGKVQAVDVERKWRLCFVPLCFKIKRKYYCLMCGRRLELYH
Homology
BLAST of IVF0025085 vs. ExPASy TrEMBL
Match: A0A1S3BRU0 (uncharacterized protein LOC103492473 OS=Cucumis melo OX=3656 GN=LOC103492473 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.3e-30
Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 0

Query: 1  MLFCKEEKELGRRQATGTCPSCGGKVQAVDVERKWRLCFVPLCFKIKRKYYCLMCGRRLE 60
          MLFCKEEKELGRRQATGTCPSCGGKVQAVDVERKWRLCFVPLCFKIKRKYYCL+CGRRLE
Sbjct: 1  MLFCKEEKELGRRQATGTCPSCGGKVQAVDVERKWRLCFVPLCFKIKRKYYCLICGRRLE 60

Query: 61 LYH 64
          LYH
Sbjct: 61 LYH 63

BLAST of IVF0025085 vs. ExPASy TrEMBL
Match: A0A6J1K383 (uncharacterized protein LOC111491984 OS=Cucurbita maxima OX=3661 GN=LOC111491984 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 7.6e-26
Identity = 54/63 (85.71%), Postives = 58/63 (92.06%), Query Frame = 0

Query: 1  MLFCKEEKELGRRQATGTCPSCGGKVQAVDVERKWRLCFVPLCFKIKRKYYCLMCGRRLE 60
          MLFCKE+KELGRRQA G CP CGGKV+AVDVERKWRLC  PLCFKIKRKYYC+MCGRRLE
Sbjct: 1  MLFCKEDKELGRRQAMGRCPLCGGKVEAVDVERKWRLCLAPLCFKIKRKYYCVMCGRRLE 60

Query: 61 LYH 64
          LY+
Sbjct: 61 LYY 63

BLAST of IVF0025085 vs. ExPASy TrEMBL
Match: A0A6J1ENJ0 (uncharacterized protein LOC111436231 OS=Cucurbita moschata OX=3662 GN=LOC111436231 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 7.6e-26
Identity = 54/63 (85.71%), Postives = 58/63 (92.06%), Query Frame = 0

Query: 1  MLFCKEEKELGRRQATGTCPSCGGKVQAVDVERKWRLCFVPLCFKIKRKYYCLMCGRRLE 60
          MLFCKE+KELGRRQA G CP CGGKV+AVDVERKWRLC  PLCFKIKRKYYC+MCGRRLE
Sbjct: 1  MLFCKEDKELGRRQAMGRCPLCGGKVEAVDVERKWRLCLAPLCFKIKRKYYCVMCGRRLE 60

Query: 61 LYH 64
          LY+
Sbjct: 61 LYY 63

BLAST of IVF0025085 vs. ExPASy TrEMBL
Match: A0A6J1D838 (uncharacterized protein LOC111018230 OS=Momordica charantia OX=3673 GN=LOC111018230 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.0e-22
Identity = 53/63 (84.13%), Postives = 57/63 (90.48%), Query Frame = 0

Query: 1  MLFCKEEKELGRRQATGTCPSCGGKVQAVDVERKWRLCFVPLCFKIKRKYYCLMCGRRLE 60
          M+FCKEE EL RRQA+GTCPSCGGKV+AVDVERKWRL  VPLCFKIKRKY C+MCGRRLE
Sbjct: 1  MIFCKEE-ELVRRQASGTCPSCGGKVEAVDVERKWRLFSVPLCFKIKRKYLCVMCGRRLE 60

Query: 61 LYH 64
          L H
Sbjct: 61 LNH 62

BLAST of IVF0025085 vs. ExPASy TrEMBL
Match: A0A067JYB9 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_19990 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 8.1e-20
Identity = 44/63 (69.84%), Postives = 53/63 (84.13%), Query Frame = 0

Query: 1  MLFCKEEKELGRRQATGTCPSCGGKVQAVDVERKWRLCFVPLCFKIKRKYYCLMCGRRLE 60
          +L  +EEKEL RRQA G+CP CGGKVQA+DVE KW  CF+P+C+KIKRKY+C +C RRLE
Sbjct: 5  LLCDEEEKELDRRQAPGSCPYCGGKVQAMDVETKWSFCFLPICYKIKRKYFCTLCARRLE 64

Query: 61 LYH 64
          LYH
Sbjct: 65 LYH 67

BLAST of IVF0025085 vs. NCBI nr
Match: XP_008451097.1 (PREDICTED: uncharacterized protein LOC103492473 [Cucumis melo])

HSP 1 Score: 140 bits (354), Expect = 3.25e-42
Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 0

Query: 1  MLFCKEEKELGRRQATGTCPSCGGKVQAVDVERKWRLCFVPLCFKIKRKYYCLMCGRRLE 60
          MLFCKEEKELGRRQATGTCPSCGGKVQAVDVERKWRLCFVPLCFKIKRKYYCL+CGRRLE
Sbjct: 1  MLFCKEEKELGRRQATGTCPSCGGKVQAVDVERKWRLCFVPLCFKIKRKYYCLICGRRLE 60

Query: 61 LYH 63
          LYH
Sbjct: 61 LYH 63

BLAST of IVF0025085 vs. NCBI nr
Match: XP_038891000.1 (uncharacterized protein LOC120080412 [Benincasa hispida])

HSP 1 Score: 139 bits (350), Expect = 1.32e-41
Identity = 61/63 (96.83%), Postives = 62/63 (98.41%), Query Frame = 0

Query: 1  MLFCKEEKELGRRQATGTCPSCGGKVQAVDVERKWRLCFVPLCFKIKRKYYCLMCGRRLE 60
          MLFC EEKELGRRQATGTCPSCGGKVQAVDVERKWRLCFVPLCFKIKRKYYC+MCGRRLE
Sbjct: 1  MLFCNEEKELGRRQATGTCPSCGGKVQAVDVERKWRLCFVPLCFKIKRKYYCVMCGRRLE 60

Query: 61 LYH 63
          LYH
Sbjct: 61 LYH 63

BLAST of IVF0025085 vs. NCBI nr
Match: XP_011648964.1 (uncharacterized protein LOC105434563 [Cucumis sativus])

HSP 1 Score: 136 bits (343), Expect = 1.55e-40
Identity = 59/63 (93.65%), Postives = 62/63 (98.41%), Query Frame = 0

Query: 1  MLFCKEEKELGRRQATGTCPSCGGKVQAVDVERKWRLCFVPLCFKIKRKYYCLMCGRRLE 60
          MLFCKEEKELGR+QATGTCPSCGGKVQAVDVER+WR CFVPLCFKIKRKYYCL+CGRRLE
Sbjct: 1  MLFCKEEKELGRQQATGTCPSCGGKVQAVDVERRWRFCFVPLCFKIKRKYYCLICGRRLE 60

Query: 61 LYH 63
          LYH
Sbjct: 61 LYH 63

BLAST of IVF0025085 vs. NCBI nr
Match: XP_023547069.1 (uncharacterized protein LOC111805987 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 127 bits (318), Expect = 1.02e-36
Identity = 55/63 (87.30%), Postives = 58/63 (92.06%), Query Frame = 0

Query: 1  MLFCKEEKELGRRQATGTCPSCGGKVQAVDVERKWRLCFVPLCFKIKRKYYCLMCGRRLE 60
          MLFCKE+KELGRRQA G CP CGGKV+AVDVERKWRLC  PLCFKIKRKYYCLMCGRRLE
Sbjct: 1  MLFCKEDKELGRRQAMGRCPLCGGKVEAVDVERKWRLCLAPLCFKIKRKYYCLMCGRRLE 60

Query: 61 LYH 63
          LY+
Sbjct: 61 LYY 63

BLAST of IVF0025085 vs. NCBI nr
Match: XP_022929732.1 (uncharacterized protein LOC111436231 [Cucurbita moschata] >XP_022996867.1 uncharacterized protein LOC111491984 [Cucurbita maxima])

HSP 1 Score: 125 bits (315), Expect = 2.92e-36
Identity = 54/63 (85.71%), Postives = 58/63 (92.06%), Query Frame = 0

Query: 1  MLFCKEEKELGRRQATGTCPSCGGKVQAVDVERKWRLCFVPLCFKIKRKYYCLMCGRRLE 60
          MLFCKE+KELGRRQA G CP CGGKV+AVDVERKWRLC  PLCFKIKRKYYC+MCGRRLE
Sbjct: 1  MLFCKEDKELGRRQAMGRCPLCGGKVEAVDVERKWRLCLAPLCFKIKRKYYCVMCGRRLE 60

Query: 61 LYH 63
          LY+
Sbjct: 61 LYY 63

BLAST of IVF0025085 vs. TAIR 10
Match: AT5G57123.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29905.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 100.5 bits (249), Expect = 5.0e-22
Identity = 44/59 (74.58%), Postives = 48/59 (81.36%), Query Frame = 0

Query: 5  KEEKELGRRQATGTCPSCGGKVQAVDVERKWRLCFVPLCFKIKRKYYCLMCGRRLELYH 64
          +EE ELGR+QA G+CP CGGKVQ +DVERKW  CFVPLCFKIKRKY C  C RRL LYH
Sbjct: 9  EEETELGRQQAPGSCPYCGGKVQMLDVERKWMFCFVPLCFKIKRKYSCSSCDRRLVLYH 67

BLAST of IVF0025085 vs. TAIR 10
Match: AT4G29905.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57123.1); Has 73 Blast hits to 73 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 91.3 bits (225), Expect = 3.0e-19
Identity = 38/63 (60.32%), Postives = 48/63 (76.19%), Query Frame = 0

Query: 1  MLFCKEEKELGRRQATGTCPSCGGKVQAVDVERKWRLCFVPLCFKIKRKYYCLMCGRRLE 60
          +++ +E+ ELGR+QA G CP CGGKV AVD+E KW  CF+PLCFK+KRKY C  C R L 
Sbjct: 5  VVYHEEKTELGRQQAPGMCPYCGGKVSAVDIETKWLFCFLPLCFKVKRKYSCSSCERHLV 64

Query: 61 LYH 64
          LY+
Sbjct: 65 LYY 67

BLAST of IVF0025085 vs. TAIR 10
Match: AT5G10695.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57123.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 71.6 bits (174), Expect = 2.5e-13
Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 0

Query: 5  KEEKELGRRQATGTCPSCGGKVQAVDVERKWRLCFVPLCFKIKRKYYCLMCGRRL 60
          ++E+ +GR  A G CP CGG VQ VDV  +WR CFVPL  K KR++ C  CG+RL
Sbjct: 9  QDERVIGRYAAPGACPYCGGAVQVVDVNSQWRFCFVPLSNKSKRRHLCSTCGKRL 63

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3BRU02.3e-3098.41uncharacterized protein LOC103492473 OS=Cucumis melo OX=3656 GN=LOC103492473 PE=... [more]
A0A6J1K3837.6e-2685.71uncharacterized protein LOC111491984 OS=Cucurbita maxima OX=3661 GN=LOC111491984... [more]
A0A6J1ENJ07.6e-2685.71uncharacterized protein LOC111436231 OS=Cucurbita moschata OX=3662 GN=LOC1114362... [more]
A0A6J1D8383.0e-2284.13uncharacterized protein LOC111018230 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A067JYB98.1e-2069.84Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_19990 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_008451097.13.25e-4298.41PREDICTED: uncharacterized protein LOC103492473 [Cucumis melo][more]
XP_038891000.11.32e-4196.83uncharacterized protein LOC120080412 [Benincasa hispida][more]
XP_011648964.11.55e-4093.65uncharacterized protein LOC105434563 [Cucumis sativus][more]
XP_023547069.11.02e-3687.30uncharacterized protein LOC111805987 [Cucurbita pepo subsp. pepo][more]
XP_022929732.12.92e-3685.71uncharacterized protein LOC111436231 [Cucurbita moschata] >XP_022996867.1 unchar... [more]
Match NameE-valueIdentityDescription
AT5G57123.15.0e-2274.58unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G29905.13.0e-1960.32unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G10695.12.5e-1354.55unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33320METHIONYL-TRNA SYNTHETASEcoord: 4..62
NoneNo IPR availablePANTHERPTHR33320:SF13SUBFAMILY NOT NAMEDcoord: 4..62

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0025085.2IVF0025085.2mRNA