IVF0025056 (gene) Melon (IVF77) v1

Overview
NameIVF0025056
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein MNN4-like
Locationchr11: 12909962 .. 12910567 (-)
RNA-Seq ExpressionIVF0025056
SyntenyIVF0025056
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGTCCATTTCGAATTCGAGAGAAGAATTGAAGCTTCGGGAAGCTACAAAGGTAAGTATTTCTTTTAACCCTAATTTAATGTAACTAGGGTTGTGTTTGGTATGCATGTTAATCTCTAAATTAAGTTTAGTTGCAATTAGGGTAAAAATCCGATCTTATTTCCACTATGTTCGTATGCTTTCCATAAAGAGCAACTTCCTCAAGTAGAGGTGAAGGATGGAGTTTGGATTGCAGCAACCCTTCACCACATAATTGTCGTCCACAAGAACAAGGCAAAGTTGAAAGCCCATAAAGCTAAACAAGATGGTAAATCAGAGGTTAAGAAAGTGGATGATGAAGCTGAAGATGAGAGAGAGGAAGAAAAAGTCCCATTAAAACGCAAATGGCAAGGCGAGGAGGAGGTCTTAGAATTGAAGAGAGAGAAATCTTCTAAGGCCAAGGACTCTAAGGATACCTTGCCATCTACGTCTACCATGAGTCCCAAGAAAAAGAATCCCAGAAAATCCCCCTCATCCGTTAAATCCAAATCCTACAAGGCCACTAATTCTCAAACTTCCATCAATCTTTTGCCACCAACCAAACCAGCCAAAATAAACCGTTGA

mRNA sequence

ATGGTGGTCCATTTCGAATTCGAGAGAAGAATTGAAGCTTCGGGAAGCTACAAAGAGCAACTTCCTCAAGTAGAGGTGAAGGATGGAGTTTGGATTGCAGCAACCCTTCACCACATAATTGTCGTCCACAAGAACAAGGCAAAGTTGAAAGCCCATAAAGCTAAACAAGATGGTAAATCAGAGGTTAAGAAAGTGGATGATGAAGCTGAAGATGAGAGAGAGGAAGAAAAAGTCCCATTAAAACGCAAATGGCAAGGCGAGGAGGAGGTCTTAGAATTGAAGAGAGAGAAATCTTCTAAGGCCAAGGACTCTAAGGATACCTTGCCATCTACGTCTACCATGAGTCCCAAGAAAAAGAATCCCAGAAAATCCCCCTCATCCGTTAAATCCAAATCCTACAAGGCCACTAATTCTCAAACTTCCATCAATCTTTTGCCACCAACCAAACCAGCCAAAATAAACCGTTGA

Coding sequence (CDS)

ATGGTGGTCCATTTCGAATTCGAGAGAAGAATTGAAGCTTCGGGAAGCTACAAAGAGCAACTTCCTCAAGTAGAGGTGAAGGATGGAGTTTGGATTGCAGCAACCCTTCACCACATAATTGTCGTCCACAAGAACAAGGCAAAGTTGAAAGCCCATAAAGCTAAACAAGATGGTAAATCAGAGGTTAAGAAAGTGGATGATGAAGCTGAAGATGAGAGAGAGGAAGAAAAAGTCCCATTAAAACGCAAATGGCAAGGCGAGGAGGAGGTCTTAGAATTGAAGAGAGAGAAATCTTCTAAGGCCAAGGACTCTAAGGATACCTTGCCATCTACGTCTACCATGAGTCCCAAGAAAAAGAATCCCAGAAAATCCCCCTCATCCGTTAAATCCAAATCCTACAAGGCCACTAATTCTCAAACTTCCATCAATCTTTTGCCACCAACCAAACCAGCCAAAATAAACCGTTGA

Protein sequence

MVVHFEFERRIEASGSYKEQLPQVEVKDGVWIAATLHHIIVVHKNKAKLKAHKAKQDGKSEVKKVDDEAEDEREEEKVPLKRKWQGEEEVLELKREKSSKAKDSKDTLPSTSTMSPKKKNPRKSPSSVKSKSYKATNSQTSINLLPPTKPAKINR
Homology
BLAST of IVF0025056 vs. ExPASy TrEMBL
Match: A0A5D3D644 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold154G00560 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.8e-21
Identity = 72/134 (53.73%), Postives = 93/134 (69.40%), Query Frame = 0

Query: 17  YKEQLPQVEVKDGVWIAATLHHIIVVHKNKAKLKAHKAKQDGKSEVKKVDDEAEDEREEE 76
           +K     VEVKDGV  ++T HHII ++KNKAKLK  K KQD K +V+++DD+ E+E+EE+
Sbjct: 108 WKRFFQGVEVKDGVLSSSTPHHIIAIYKNKAKLKHLKTKQDDKLQVEEMDDKDEEEKEED 167

Query: 77  KVPLKRKWQGEEEVLELKREKSSKAKDSKDTLPSTSTMSPKKKNPRKSPSSVKSKSYKAT 136
            VPLKRK +GEE+  +LKR KS KA+D ++TL   ST SPKK  P   PS  KSKS+KAT
Sbjct: 168 YVPLKRKRKGEEDTSKLKRVKSVKARDFEETLSPASTKSPKKNKPTDLPSPNKSKSFKAT 227

Query: 137 NSQTSINLLPPTKP 151
           +SQT      P  P
Sbjct: 228 SSQTPTKCTMPPPP 241

BLAST of IVF0025056 vs. ExPASy TrEMBL
Match: A0A5A7VKE9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold236G001180 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 2.0e-19
Identity = 73/142 (51.41%), Postives = 93/142 (65.49%), Query Frame = 0

Query: 2   VVHFEFERRIEASGSYKEQLPQ--VEVKDGVWIAATLHHIIVVHKNKAKLKAHKAKQDGK 61
           +   EF+R  +      E++    +++KD V  A+TLH +I +HKNKA+LK  K KQ G+
Sbjct: 52  IAEMEFKRLAKKGQEKMEKVRTRLLKIKDEVCTASTLHRVIAIHKNKARLKCLKTKQAGQ 111

Query: 62  SEVKKVDD-EAEDEREEEKVPLKRKWQGEEEVLELKREKSSKAKDSKDTLPSTSTMSPKK 121
            EVK VDD + E+E EE+ VPLK K QGEEE L  K+ K+SKAKDSKDTLP  ST  PKK
Sbjct: 112 IEVKVVDDKDEEEESEEDNVPLKCKRQGEEEALGSKKAKTSKAKDSKDTLPHASTTCPKK 171

Query: 122 KNPRKSPSSVKSKSYKATNSQT 141
           K P  + S +KSK  KA  SQT
Sbjct: 172 KKPTTTFSPIKSKFSKAKTSQT 193

BLAST of IVF0025056 vs. ExPASy TrEMBL
Match: A0A5D3BYP6 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G001500 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 5.8e-19
Identity = 71/136 (52.21%), Postives = 89/136 (65.44%), Query Frame = 0

Query: 18  KEQLPQVEVKDGVWIAATLHHIIVVHKNKAKLKAHKAKQDGKSEVKKVDDEAEDEREEEK 77
           +E    VEVK G+W ++ +H II ++KNKAKLK  K K +GK EVK+VD E ++E++E  
Sbjct: 87  EEHYAMVEVKVGIWSSSIVHRIISIYKNKAKLKRLKTKPNGKLEVKEVDGEDKEEKKEND 146

Query: 78  VPLKRKWQGEEEVLELKREKSSKAKDSKDTLPSTSTMSPK-KKNPRKSPSSVKSKSYKAT 137
           +PLKRK QGEEE    K+ K+S A+DSK+TL   ST SPK KK     PS  KSKS KAT
Sbjct: 147 IPLKRKRQGEEEASRSKKLKTSTARDSKETLSPASTKSPKNKKKSTDLPSPNKSKSSKAT 206

Query: 138 NSQTSINLLPPTKPAK 153
            SQT I    P  P K
Sbjct: 207 GSQTPIKFKTPPPPLK 222

BLAST of IVF0025056 vs. ExPASy TrEMBL
Match: A0A5A7V1I3 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005890 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 9.2e-17
Identity = 68/130 (52.31%), Postives = 86/130 (66.15%), Query Frame = 0

Query: 24  VEVKDGVWIAATLHHIIVVHKNKAKLKAHKAKQDGKSEVKKVDDEAEDEREEEKVPLKRK 83
           VEVK G+W ++ +H II ++KNKAKLK  K K +GK EVK+VD E ++E++E  +PLK K
Sbjct: 214 VEVKVGIWSSSIVHRIISIYKNKAKLKRLKTKPNGKLEVKEVDGEDKEEKKENDIPLKCK 273

Query: 84  WQGEEEVLELKREKSSKAKDSKDTLPSTSTMSPK-KKNPRKSPSSVKSKSYKATNSQTSI 143
            Q EEE    K+ K+S A+DSK+TL   ST SPK KK     PS  KSKS KAT+SQT I
Sbjct: 274 RQREEEASRSKKLKTSTARDSKETLSPASTKSPKNKKKSTDLPSPNKSKSSKATSSQTPI 333

Query: 144 NLLPPTKPAK 153
               P  P K
Sbjct: 334 KFKTPPPPLK 343

BLAST of IVF0025056 vs. ExPASy TrEMBL
Match: A0A5A7TV72 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G006200 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 9.2e-17
Identity = 49/65 (75.38%), Postives = 56/65 (86.15%), Query Frame = 0

Query: 19  EQLPQVEVKDGVWIAATLHHIIVVHKNKAKLKAHKAKQDGKSEVKKVDDEAEDEREEEKV 78
           +Q PQVE+KDGVW   TLHHII VHKNKAK K HK KQDGKSEV+KVD+EAEDE+E+E+V
Sbjct: 55  KQFPQVELKDGVWTVTTLHHIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDEEV 114

Query: 79  PLKRK 84
           PLK K
Sbjct: 115 PLKCK 119

BLAST of IVF0025056 vs. NCBI nr
Match: KAA0037951.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK19029.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 111 bits (278), Expect = 1.35e-26
Identity = 72/134 (53.73%), Postives = 93/134 (69.40%), Query Frame = 0

Query: 17  YKEQLPQVEVKDGVWIAATLHHIIVVHKNKAKLKAHKAKQDGKSEVKKVDDEAEDEREEE 76
           +K     VEVKDGV  ++T HHII ++KNKAKLK  K KQD K +V+++DD+ E+E+EE+
Sbjct: 108 WKRFFQGVEVKDGVLSSSTPHHIIAIYKNKAKLKHLKTKQDDKLQVEEMDDKDEEEKEED 167

Query: 77  KVPLKRKWQGEEEVLELKREKSSKAKDSKDTLPSTSTMSPKKKNPRKSPSSVKSKSYKAT 136
            VPLKRK +GEE+  +LKR KS KA+D ++TL   ST SPKK  P   PS  KSKS+KAT
Sbjct: 168 YVPLKRKRKGEEDTSKLKRVKSVKARDFEETLSPASTKSPKKNKPTDLPSPNKSKSFKAT 227

Query: 137 NSQTSINLLPPTKP 150
           +SQT      P  P
Sbjct: 228 SSQTPTKCTMPPPP 241

BLAST of IVF0025056 vs. NCBI nr
Match: TYK03306.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 103 bits (258), Expect = 4.03e-24
Identity = 71/136 (52.21%), Postives = 89/136 (65.44%), Query Frame = 0

Query: 18  KEQLPQVEVKDGVWIAATLHHIIVVHKNKAKLKAHKAKQDGKSEVKKVDDEAEDEREEEK 77
           +E    VEVK G+W ++ +H II ++KNKAKLK  K K +GK EVK+VD E ++E++E  
Sbjct: 87  EEHYAMVEVKVGIWSSSIVHRIISIYKNKAKLKRLKTKPNGKLEVKEVDGEDKEEKKEND 146

Query: 78  VPLKRKWQGEEEVLELKREKSSKAKDSKDTLPSTSTMSPK-KKNPRKSPSSVKSKSYKAT 137
           +PLKRK QGEEE    K+ K+S A+DSK+TL   ST SPK KK     PS  KSKS KAT
Sbjct: 147 IPLKRKRQGEEEASRSKKLKTSTARDSKETLSPASTKSPKNKKKSTDLPSPNKSKSSKAT 206

Query: 138 NSQTSINLLPPTKPAK 152
            SQT I    P  P K
Sbjct: 207 GSQTPIKFKTPPPPLK 222

BLAST of IVF0025056 vs. NCBI nr
Match: KAA0066896.1 (hypothetical protein E6C27_scaffold550G00090 [Cucumis melo var. makuwa] >TYK27232.1 hypothetical protein E5676_scaffold236G001180 [Cucumis melo var. makuwa])

HSP 1 Score: 103 bits (258), Expect = 2.94e-23
Identity = 73/142 (51.41%), Postives = 93/142 (65.49%), Query Frame = 0

Query: 2   VVHFEFERRIEASGSYKEQLPQ--VEVKDGVWIAATLHHIIVVHKNKAKLKAHKAKQDGK 61
           +   EF+R  +      E++    +++KD V  A+TLH +I +HKNKA+LK  K KQ G+
Sbjct: 52  IAEMEFKRLAKKGQEKMEKVRTRLLKIKDEVCTASTLHRVIAIHKNKARLKCLKTKQAGQ 111

Query: 62  SEVKKVDD-EAEDEREEEKVPLKRKWQGEEEVLELKREKSSKAKDSKDTLPSTSTMSPKK 121
            EVK VDD + E+E EE+ VPLK K QGEEE L  K+ K+SKAKDSKDTLP  ST  PKK
Sbjct: 112 IEVKVVDDKDEEEESEEDNVPLKCKRQGEEEALGSKKAKTSKAKDSKDTLPHASTTCPKK 171

Query: 122 KNPRKSPSSVKSKSYKATNSQT 140
           K P  + S +KSK  KA  SQT
Sbjct: 172 KKPTTTFSPIKSKFSKAKTSQT 193

BLAST of IVF0025056 vs. NCBI nr
Match: KAA0046046.1 (hypothetical protein E6C27_scaffold243G006200 [Cucumis melo var. makuwa])

HSP 1 Score: 95.9 bits (237), Expect = 3.47e-22
Identity = 48/63 (76.19%), Postives = 55/63 (87.30%), Query Frame = 0

Query: 19  EQLPQVEVKDGVWIAATLHHIIVVHKNKAKLKAHKAKQDGKSEVKKVDDEAEDEREEEKV 78
           +Q PQVE+KDGVW   TLHHII VHKNKAK K HK KQDGKSEV+KVD+EAEDE+E+E+V
Sbjct: 55  KQFPQVELKDGVWTVTTLHHIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDEEV 114

Query: 79  PLK 81
           PLK
Sbjct: 115 PLK 117

BLAST of IVF0025056 vs. NCBI nr
Match: TYK11921.1 (hypothetical protein E5676_scaffold177G00890 [Cucumis melo var. makuwa])

HSP 1 Score: 95.9 bits (237), Expect = 3.48e-21
Identity = 49/63 (77.78%), Postives = 55/63 (87.30%), Query Frame = 0

Query: 19  EQLPQVEVKDGVWIAATLHHIIVVHKNKAKLKAHKAKQDGKSEVKKVDDEAEDEREEEKV 78
           EQ PQVE+KDGVW  ATLH II VHKNKAK K HK KQDGKSEV+KVD+EAEDE+E+E+V
Sbjct: 55  EQFPQVELKDGVWTVATLHRIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDEEV 114

Query: 79  PLK 81
           PLK
Sbjct: 115 PLK 117

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3D6442.8e-2153.73Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold154G00... [more]
A0A5A7VKE92.0e-1951.41Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BYP65.8e-1952.21Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00... [more]
A0A5A7V1I39.2e-1752.31Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005... [more]
A0A5A7TV729.2e-1775.38Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0037951.11.35e-2653.73protein MNN4-like [Cucumis melo var. makuwa] >TYK19029.1 protein MNN4-like [Cucu... [more]
TYK03306.14.03e-2452.21protein MNN4-like [Cucumis melo var. makuwa][more]
KAA0066896.12.94e-2351.41hypothetical protein E6C27_scaffold550G00090 [Cucumis melo var. makuwa] >TYK2723... [more]
KAA0046046.13.47e-2276.19hypothetical protein E6C27_scaffold243G006200 [Cucumis melo var. makuwa][more]
TYK11921.13.48e-2177.78hypothetical protein E5676_scaffold177G00890 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 55..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..155
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..104

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0025056.1IVF0025056.1mRNA