IVF0024886 (gene) Melon (IVF77) v1

Overview


Name	IVF0024886
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	stress-induced protein KIN2-like
Location	chr09: 1436189 .. 1436935 (+)
RNA-Seq Expression	IVF0024886
Synteny	IVF0024886

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATGACCATTACTTCCTGTCAAGGAGTGATTCAATTACAACTACTATTTAAATCATAATTAACAAGTTTGAGCATGTAAATTAATCAAACCAAAAACTCCAAAACTCACCAATTTTGATCTTTCTTCCTTGCTTTCGTGTTTTCTAAATTCTTCACACTAAACAGTATGGATAACTCCCAAAAGATGAGCTATCATGCTGGAGAAGCCAAGGGTCAAACTCAGGTATTTATATTGGAGTAACATCCCTGCAATCTGATAACTTAATTTTATTTAATGACTTTGTTTTGAGTTATTAATTTTCCTTTCAAGAGTGCGTTTGGTAACTCACACTACCCCAATTACATCACTCTTAAAACGCACCCTAACTCACATTTGATTCGTTGTGTTTTGTTAATATGTGACCTTCTTCACATGCACAGGAGAAGGTGAGCAACATGATGGACAAGGCAAGCAATGCAGCTCAATCGACTAAGGAATCAGTGCAGGAAGCAGGACAACAAATGATGGCTAAAGCACAAGGTGCAACTGATGCTGTTAAAGATGCAGTTAACAAATGAAGCTAAGCTAGCTATGTCGTCGTCGATCGAATAATTTGCTCATCGTAGTTTTCGTATCTTTTTTCCAATAATAATGCCTCTCTTCAATTTTGTTTTTGGTTTAGACTTTTCTTTTCCATCTGTCTTAAACAAAGCTTGTATTGTTCAAGAGACTTGAAAATAACAAAGAAAAAACTCTCTCATATGGCT

mRNA sequence

CATGACCATTACTTCCTGTCAAGGAGTGATTCAATTACAACTACTATTTAAATCATAATTAACAAGTTTGAGCATGTAAATTAATCAAACCAAAAACTCCAAAACTCACCAATTTTGATCTTTCTTCCTTGCTTTCGTGTTTTCTAAATTCTTCACACTAAACAGTATGGATAACTCCCAAAAGATGAGCTATCATGCTGGAGAAGCCAAGGGTCAAACTCAGGAGAAGGTGAGCAACATGATGGACAAGGCAAGCAATGCAGCTCAATCGACTAAGGAATCAGTGCAGGAAGCAGGACAACAAATGATGGCTAAAGCACAAGGTGCAACTGATGCTGTTAAAGATGCAGTTAACAAATGAAGCTAAGCTAGCTATGTCGTCGTCGATCGAATAATTTGCTCATCGTAGTTTTCGTATCTTTTTTCCAATAATAATGCCTCTCTTCAATTTTGTTTTTGGTTTAGACTTTTCTTTTCCATCTGTCTTAAACAAAGCTTGTATTGTTCAAGAGACTTGAAAATAACAAAGAAAAAACTCTCTCATATGGCT

Coding sequence (CDS)

ATGGATAACTCCCAAAAGATGAGCTATCATGCTGGAGAAGCCAAGGGTCAAACTCAGGAGAAGGTGAGCAACATGATGGACAAGGCAAGCAATGCAGCTCAATCGACTAAGGAATCAGTGCAGGAAGCAGGACAACAAATGATGGCTAAAGCACAAGGTGCAACTGATGCTGTTAAAGATGCAGTTAACAAATGA

Protein sequence

MDNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKDAVNK

Homology

[Close]

BLAST of IVF0024886 vs. ExPASy TrEMBL
Match: A0A5D3BPC0 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002090 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.6e-23
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MDNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKD 60
          MDNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKD
Sbjct: 1  MDNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKD 60

Query: 61 AVNK 65
          AVNK
Sbjct: 61 AVNK 64

[Close]

BLAST of IVF0024886 vs. ExPASy TrEMBL
Match: A0A1S3CA67 (stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103498580 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.6e-23
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MDNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKD 60
          MDNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKD
Sbjct: 1  MDNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKD 60

Query: 61 AVNK 65
          AVNK
Sbjct: 61 AVNK 64

[Close]

BLAST of IVF0024886 vs. ExPASy TrEMBL
Match: A0A0A0KXN2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643250 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.8e-20
Identity = 58/63 (92.06%), Postives = 60/63 (95.24%), Query Frame = 0


Query: 2  DNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKDA 61
          DNSQKMSYHAGEAKGQTQEK+SNMMDKAS+AAQS KESVQE GQQMMAKAQGA DAVKDA
Sbjct: 3  DNSQKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVKDA 62

Query: 62 VNK 65
          VNK
Sbjct: 63 VNK 65

[Close]

BLAST of IVF0024886 vs. ExPASy TrEMBL
Match: A0A5D3BLF3 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002100 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.4e-19
Identity = 56/63 (88.89%), Postives = 60/63 (95.24%), Query Frame = 0


Query: 2  DNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKDA 61
          DNSQKMSY+AGEAKGQTQEK SNMMDKASNAA+S KES+QE+GQQMMAKAQGA DAVKDA
Sbjct: 3  DNSQKMSYNAGEAKGQTQEKASNMMDKASNAAESAKESIQESGQQMMAKAQGAADAVKDA 62

Query: 62 VNK 65
          VNK
Sbjct: 63 VNK 65

[Close]

BLAST of IVF0024886 vs. ExPASy TrEMBL
Match: A0A5A7TD88 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G002080 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.3e-19
Identity = 56/63 (88.89%), Postives = 59/63 (93.65%), Query Frame = 0


Query: 2  DNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKDA 61
          DNSQKMSY+AGEAKGQTQEKVSNMMDKASNAA+S KES QE GQQMMAKA+GA DAVKDA
Sbjct: 3  DNSQKMSYNAGEAKGQTQEKVSNMMDKASNAAESAKESAQETGQQMMAKAEGAADAVKDA 62

Query: 62 VNK 65
          VNK
Sbjct: 63 VNK 65

[Close]

BLAST of IVF0024886 vs. NCBI nr
Match: XP_008459449.1 (PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0039404.1 stress-induced protein KIN2-like [Cucumis melo var. makuwa] >TYK00592.1 stress-induced protein KIN2-like [Cucumis melo var. makuwa])

HSP 1 Score: 115 bits (287), Expect = 5.89e-32
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MDNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKD 60
          MDNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKD
Sbjct: 1  MDNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKD 60

Query: 61 AVNK 64
          AVNK
Sbjct: 61 AVNK 64

[Close]

BLAST of IVF0024886 vs. NCBI nr
Match: XP_038891080.1 (late embryogenesis abundant protein 2-like [Benincasa hispida])

HSP 1 Score: 106 bits (265), Expect = 1.34e-28
Identity = 58/64 (90.62%), Postives = 62/64 (96.88%), Query Frame = 0


Query: 1  MDNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKD 60
          MDNSQKMSYHAGEAKGQTQEKVSNMMDKAS+AAQS KES+QEAGQQ+ AKAQGATDAVKD
Sbjct: 1  MDNSQKMSYHAGEAKGQTQEKVSNMMDKASDAAQSAKESIQEAGQQVKAKAQGATDAVKD 60

Query: 61 AVNK 64
          A+NK
Sbjct: 61 AINK 64

[Close]

BLAST of IVF0024886 vs. NCBI nr
Match: XP_004141485.1 (late embryogenesis abundant protein 2 [Cucumis sativus] >KGN52546.1 hypothetical protein Csa_008504 [Cucumis sativus])

HSP 1 Score: 104 bits (260), Expect = 8.00e-28
Identity = 58/63 (92.06%), Postives = 60/63 (95.24%), Query Frame = 0


Query: 2  DNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKDA 61
          DNSQKMSYHAGEAKGQTQEK+SNMMDKAS+AAQS KESVQE GQQMMAKAQGA DAVKDA
Sbjct: 3  DNSQKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVKDA 62

Query: 62 VNK 64
          VNK
Sbjct: 63 VNK 65

[Close]

BLAST of IVF0024886 vs. NCBI nr
Match: TYK00593.1 (stress-induced protein KIN2-like [Cucumis melo var. makuwa])

HSP 1 Score: 102 bits (254), Expect = 6.59e-27
Identity = 56/63 (88.89%), Postives = 60/63 (95.24%), Query Frame = 0


Query: 2  DNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKDA 61
          DNSQKMSY+AGEAKGQTQEK SNMMDKASNAA+S KES+QE+GQQMMAKAQGA DAVKDA
Sbjct: 3  DNSQKMSYNAGEAKGQTQEKASNMMDKASNAAESAKESIQESGQQMMAKAQGAADAVKDA 62

Query: 62 VNK 64
          VNK
Sbjct: 63 VNK 65

[Close]

BLAST of IVF0024886 vs. NCBI nr
Match: XP_038891163.1 (stress-induced protein KIN2-like [Benincasa hispida])

HSP 1 Score: 101 bits (252), Expect = 1.30e-26
Identity = 56/64 (87.50%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 1  MDNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKD 60
          MDNSQKMSYHAGEAKGQ QEKVSNMMDKA++AAQSTKES+QEAGQQ+ AKAQGA +AVKD
Sbjct: 1  MDNSQKMSYHAGEAKGQAQEKVSNMMDKANDAAQSTKESMQEAGQQIKAKAQGAAEAVKD 60

Query: 61 AVNK 64
          AVNK
Sbjct: 61 AVNK 64

[Close]

BLAST of IVF0024886 vs. TAIR 10
Match: AT5G53820.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 78.6 bits (192), Expect = 2.1e-15
Identity = 40/59 (67.80%), Postives = 52/59 (88.14%), Query Frame = 0


Query: 2  DNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKD 61
          +NSQ MS++AG+AKGQTQEK SN++DKASNAAQS KES+QE GQQ+  KAQGA++ +K+
Sbjct: 3  NNSQSMSFNAGQAKGQTQEKASNLIDKASNAAQSAKESIQEGGQQLKQKAQGASETIKE 61

[Close]

BLAST of IVF0024886 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 77.0 bits (188), Expect = 6.0e-15
Identity = 42/59 (71.19%), Postives = 51/59 (86.44%), Query Frame = 0


Query: 3  NSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKDA 62
          NSQ +S+ AG+AKGQTQEK S MMDKASNAAQS KES++E GQQ+  KAQGAT++VK+A
Sbjct: 4  NSQNISFQAGQAKGQTQEKASTMMDKASNAAQSAKESLKETGQQIKEKAQGATESVKNA 62

[Close]

BLAST of IVF0024886 vs. TAIR 10
Match: AT3G02480.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 68.6 bits (166), Expect = 2.1e-12
Identity = 37/60 (61.67%), Postives = 44/60 (73.33%), Query Frame = 0


Query: 1  MDNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKD 60
          MDN Q  SY AG+A GQT+EK   MMDKA +AA S ++S+Q+ GQQM  KAQGA D VKD
Sbjct: 1  MDNKQNASYQAGQATGQTKEKAGGMMDKAKDAAASAQDSLQQTGQQMKEKAQGAADVVKD 60

The following BLAST results are available for this feature:

BLAST of IVF0024886 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0024886 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BPC0	3.6e-23	100.00	Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CA67	3.6e-23	100.00	stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103498580 PE=4 SV...	[more]
A0A0A0KXN2	4.8e-20	92.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643250 PE=4 SV=1	[more]
A0A5D3BLF3	2.4e-19	88.89	Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A5A7TD88	5.3e-19	88.89	Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]

BLAST of IVF0024886 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459449.1	5.89e-32	100.00	PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0039404.1 stress-...	[more]
XP_038891080.1	1.34e-28	90.63	late embryogenesis abundant protein 2-like [Benincasa hispida]	[more]
XP_004141485.1	8.00e-28	92.06	late embryogenesis abundant protein 2 [Cucumis sativus] >KGN52546.1 hypothetical...	[more]
TYK00593.1	6.59e-27	88.89	stress-induced protein KIN2-like [Cucumis melo var. makuwa]	[more]
XP_038891163.1	1.30e-26	87.50	stress-induced protein KIN2-like [Benincasa hispida]	[more]

BLAST of IVF0024886 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53820.1	2.1e-15	67.80	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G38760.1	6.0e-15	71.19	Late embryogenesis abundant protein (LEA) family protein	[more]
AT3G02480.1	2.1e-12	61.67	Late embryogenesis abundant protein (LEA) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 26..46
None	No IPR available	GENE3D	6.10.140.1430		coord: 3..47 e-value: 2.3E-5 score: 26.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..48
None	No IPR available	PANTHER	PTHR34191:SF4	LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN	coord: 1..64
IPR039624	Stress-induced protein KIN1/KIN2	PANTHER	PTHR34191	LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN	coord: 1..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0024886.2	IVF0024886.2	mRNA