IVF0024830 (gene) Melon (IVF77) v1

Overview


Name	IVF0024830
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Centromere protein S-like
Location	chr12: 22729711 .. 22732265 (+)
RNA-Seq Expression	IVF0024830
Synteny	IVF0024830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACGATTCGTTTAAGGCCATCCCATTCCCGTCACGTCGTCAGAGGCATTCGTGGAGGGAAATAAATGCGAAATGGAAAAAGGTAAAGCCTCTGCTCTGCAATGGAAACTAGAATGGAAGAAGACGACTCCGCTTCCGAACTATTGAGGGACAGGTTCCGGCTCTCCACCATTTCTATTGCTGAAGCTGAAGGTTAACCTCATCTCCTCCCCCGATTACTTAATGCTAATTCCATCTTTTCTTACTTTTTGTTTGTCTTACTCTTTTGTCCAACGGTTTGGTTTGTTTGTTTTGCAGCGAATAAAAGCGGCATGGAAATTTCTGAACCCGTGATGACTTGTGTTGCGGATTTAGCATTCAAATTTACAAGTTTGTTTACCTCGCTTTTCTGCCTGTTTTGAGTCTGCAATGTTATTTTCAGCGATTTGTATTTTCATTCTTCATTATGTTCATAATCTAATTGCTAATTCTTTTAATTTTTCTTCTCTTCTACCTGTGCTTCCGTCAATTTTAGGTACCTTATTTGTGATTTCAACTATATATTTCTTTACTCTTTAGCATGCATTCGGTTTGTTAGGACGCCTCTCTGTGCTTTGTTGTTAAGTTGTGTGACCTAGGTGGAAGGAAACTGCATTACTTTGGTCAAGTTTAAGACAGTAAAAATTACTTTGGTCAAGTTTAAGACAGTAAAAATTAACTTAGAGAGAAGTTTCTAGATCAACAAATGATGGAGAGAGACTATTGTGATAACTGAAGGAATGAATGTGCACGATACTTTTGGATTCTAATCAGACGTTCTTATAGTTCATATGAATGTTTCTTCTTACCTTCGGACTTGCACCTTACAGTGATCATGTTAGTTGTAAAGCCTTAACTCTCGTCGTGCTCTTGTGGGAACATATGCCTTAGGTAGAAGCGGTGTAAGACCCCTAGGAACCAAAAATGGCGCTAATCTTTTAACTTAGATTTTGTGCTTTTGCCTCAAGGAAGACATATAGTTATTACTTTGCGGCTTAAAACTGTTTGTTATCTACAGCATTTTTTACCATAAGTTTTGAAAATATATTCACATTGTAATTCACATTGTATGAAAATTATTGTTATTATTTGATCAATTTTGGCAAAAATTAACTTTGAGGAACTAAGGGGTCAATTTGGATTGACTTGTTAAGTGTTCTAAACACTTTTTTTGCCCTTATAAACACTTAAAAGGTCAATCCGAACGTCCCCAGAATTTAAGATTTATTAAACGTACGACTAAAATTGGACAACTGAAAGTATGGGGACTAGATTTGTTTTTTGATCTTATTATTTTAATTTATATATAATATATTAGCTTCAAGTCTGTTTTCTAACTTCTTTATTTTTCTTGTTGTATAATCCTTTTTTACTTTGAGTTCTATTTAATAAAAAGCTTGTCTCCTTTAAAAAAAAGTCTGTTTTCTGACTTCTTTATTTTTCTCGTTATATATTCTATTCTTTCGTTGTCTAAAAGAAGTAAACGTATACTTATATCATATGGATGAAATTAGTGTATTCCTTCGTCAAATGAAGGAATGATTTGGTAGATTTACAAAGGTTCAACTGGACCTTAAGTTCATAGCTTGGTATAGGGTCATGCTTATGTTTGTAGTCACAGGGATAACATATTAAATGTCAATGGTACAATTCATGCGAGGAAAACAAAATTTGTCACTCTCTTGCAATAATTGTAGTTCCGTCTAACCAGCAAGGAAAGAAGATAATTCTGTCATATTTGTGTTTGATTTGGTTTTATGATTAGTGTTGCAATGAGATAACGGATTGATAAATTTTGTAGCAGAACAGTTGGCGAAGGACCTTGAGTTATTTGCTCAACATGCTGGTCGGAAATCGGTAAATACAGAAGATGTAATACTAACAGGTTAGCGTGTCCAATTCCCAAGTTGTTACTTGTTGTAATTAGTCTAGTTATATTTAGTCCATATGCAACAGACTTGAATTAGTACCTAATTGCCTATTCCTCTTCGCTTTTGCTTCATTTTGGTCTCAGCCCATAGAAACGAGCATTTAGCTGCCATATTAACATCCATCTGCAATGATCTAAAGGCAAAAGAGCCTCAAAGTGAAAGAAAGCGTAAAAAGGCACCAAAAAAGGATGATAGAGATAGAGGTGCCGTGCATATTGCTGAAGCCTAATCACATCTCCCATCTGGCAGATCTCTAGTTAACAAGTGTGCGTACCAACAAGCAAGCGCAATAGCTTGTGATATTTTTCCGTTTCTTGGTTATACTAATTGGTAAAACCATTTTCGCATGATATGGGCGTATGGAGTTCTTCTGATTCAAAGTATAAGCTTCGGTATCATGCAATCCATTGAAGTGGCCCAAGTGTAGAAACATGTATTTTGGTTTTGCTTTAGGCATTTGAGATTGTCAAAAAGCGTGAGGTTTAATGTTTGTTAGTAGTTTTCGTTGCAAACAGGAAATTGCTCTTTGTACATCGACAGAACAGTTTTATAGTTAAGACTGGTAAGTGCTCAATAGTTTGATATTATAAAGTCATAAATCATGTC

mRNA sequence

AAACGATTCGTTTAAGGCCATCCCATTCCCGTCACGTCGTCAGAGGCATTCGTGGAGGGAAATAAATGCGAAATGGAAAAAGGTAAAGCCTCTGCTCTGCAATGGAAACTAGAATGGAAGAAGACGACTCCGCTTCCGAACTATTGAGGGACAGGTTCCGGCTCTCCACCATTTCTATTGCTGAAGCTGAAGCGAATAAAAGCGGCATGGAAATTTCTGAACCCGTGATGACTTGTGTTGCGGATTTAGCATTCAAATTTACAACAGAACAGTTGGCGAAGGACCTTGAGTTATTTGCTCAACATGCTGGTCGGAAATCGGTAAATACAGAAGATGTAATACTAACAGCCCATAGAAACGAGCATTTAGCTGCCATATTAACATCCATCTGCAATGATCTAAAGGCAAAAGAGCCTCAAAGTGAAAGAAAGCGTAAAAAGGCACCAAAAAAGGATGATAGAGATAGAGGTGCCGTGCATATTGCTGAAGCCTAATCACATCTCCCATCTGGCAGATCTCTAGTTAACAAGTGTGCGTACCAACAAGCAAGCGCAATAGCTTGTGATATTTTTCCGTTTCTTGGTTATACTAATTGGTAAAACCATTTTCGCATGATATGGGCGTATGGAGTTCTTCTGATTCAAAGTATAAGCTTCGGTATCATGCAATCCATTGAAGTGGCCCAAGTGTAGAAACATGTATTTTGGTTTTGCTTTAGGCATTTGAGATTGTCAAAAAGCGTGAGGTTTAATGTTTGTTAGTAGTTTTCGTTGCAAACAGGAAATTGCTCTTTGTACATCGACAGAACAGTTTTATAGTTAAGACTGGTAAGTGCTCAATAGTTTGATATTATAAAGTCATAAATCATGTC

Coding sequence (CDS)

ATGGAAACTAGAATGGAAGAAGACGACTCCGCTTCCGAACTATTGAGGGACAGGTTCCGGCTCTCCACCATTTCTATTGCTGAAGCTGAAGCGAATAAAAGCGGCATGGAAATTTCTGAACCCGTGATGACTTGTGTTGCGGATTTAGCATTCAAATTTACAACAGAACAGTTGGCGAAGGACCTTGAGTTATTTGCTCAACATGCTGGTCGGAAATCGGTAAATACAGAAGATGTAATACTAACAGCCCATAGAAACGAGCATTTAGCTGCCATATTAACATCCATCTGCAATGATCTAAAGGCAAAAGAGCCTCAAAGTGAAAGAAAGCGTAAAAAGGCACCAAAAAAGGATGATAGAGATAGAGGTGCCGTGCATATTGCTGAAGCCTAA

Protein sequence

METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFTTEQLAKDLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDRDRGAVHIAEA

Homology

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BLAST of IVF0024830 vs. ExPASy Swiss-Prot
Match: Q9FI55 (Protein MHF1 homolog OS=Arabidopsis thaliana OX=3702 GN=MHF1 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 6.1e-35
Identity = 80/115 (69.57%), Postives = 97/115 (84.35%), Query Frame = 0


Query: 7   EDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFTTEQLAKDLELFA 66
           E+ S  +L+RDRFRLS ISIAEAEA K+GMEI  PV+ CVADLAFK+  E +AKDLELFA
Sbjct: 116 EEYSMDDLIRDRFRLSAISIAEAEAKKNGMEIGGPVVACVADLAFKY-AENVAKDLELFA 175

Query: 67  QHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKK-APKKDDR 121
            HAGRK VN +DV+L+AHRN++LAA L S+CN+LKAKEPQSERKRKK + KK+D+
Sbjct: 176 HHAGRKVVNMDDVVLSAHRNDNLAASLRSLCNELKAKEPQSERKRKKGSAKKEDK 229

[Close]

BLAST of IVF0024830 vs. ExPASy Swiss-Prot
Match: Q2TBR7 (Centromere protein S OS=Bos taurus OX=9913 GN=CENPS PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.2e-08
Identity = 38/105 (36.19%), Postives = 59/105 (56.19%), Query Frame = 0


Query: 26  IAEAEANKSGMEISEPVMTCVADLAFKFTTEQLAKDLELFAQHAGRKSVNTEDVILTAHR 85
           + E  A+   M+ S+  +  ++++ F    E  AKDLE+FA+HA R ++NTEDV L A R
Sbjct: 30  LCEEVASDKDMQFSKQTIAAISEVTFG-QCENFAKDLEMFARHAKRSTINTEDVKLLARR 89

Query: 86  NEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDRDRGAVHIAEA 131
           +  L   +T    D+   +   E+K KK  K +D +R +V  AEA
Sbjct: 90  SHSLLKYITEKNEDI--AQLNLEKKAKKKKKLEDENRNSVESAEA 131

[Close]

BLAST of IVF0024830 vs. ExPASy Swiss-Prot
Match: Q8N2Z9 (Centromere protein S OS=Homo sapiens OX=9606 GN=CENPS PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 9.2e-07
Identity = 40/129 (31.01%), Postives = 66/129 (51.16%), Query Frame = 0


Query: 2   ETRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFTTEQLAKD 61
           ET  ++  S  + L+     +   + E  A    M+ S+  +  +++L F+   E  AKD
Sbjct: 6   ETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFR-QCENFAKD 65

Query: 62  LELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDRD 121
           LE+FA+HA R ++NTEDV L A R+  L   +T    ++   +   ERK +K  K +D  
Sbjct: 66  LEMFARHAKRTTINTEDVKLLARRSNSLLKYITDKSEEI--AQINLERKAQKKKKSEDGS 125

Query: 122 RGAVHIAEA 131
           + +   AEA
Sbjct: 126 KNSRQPAEA 131

[Close]

BLAST of IVF0024830 vs. ExPASy Swiss-Prot
Match: Q6NRI8 (Centromere protein S OS=Xenopus laevis OX=8355 GN=cenps PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.5e-06
Identity = 32/113 (28.32%), Postives = 61/113 (53.98%), Query Frame = 0


Query: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFTTEQLAK 60
           M    EE  S ++ L+        S+ +  A+   ++ S+  +  ++++ F+   E  AK
Sbjct: 1   MAEGQEEHFSRTQRLKAAVHYVVGSLCQEVADDKEIDFSKQAIAAISEITFR-QCESFAK 60

Query: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKK 114
           DLE+FA+HA R ++N +DV L A R+  L A ++   +++ A   + + K+KK
Sbjct: 61  DLEIFARHAKRTTINMDDVKLLARRSRSLYAHISKCSDEIAANSLEQKEKKKK 112

[Close]

BLAST of IVF0024830 vs. ExPASy Swiss-Prot
Match: E1BSW7 (Centromere protein S OS=Gallus gallus OX=9031 GN=CENPS PE=1 SV=2)

HSP 1 Score: 50.8 bits (120), Expect = 1.3e-05
Identity = 30/108 (27.78%), Postives = 58/108 (53.70%), Query Frame = 0


Query: 6   EEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFTTEQLAKDLELF 65
           E+ +   + LR     +T  + +  A   G+  S+  +  ++++ F+   E  A+DLE+F
Sbjct: 7   EQRELLIQRLRAAVHYTTGCLCQDVAEDKGVLFSKQTVAAISEITFR-QCENFARDLEMF 66

Query: 66  AQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKK 114
           A+HA R ++ +EDV L A R+  L   +T   ++L +   + + K+KK
Sbjct: 67  ARHAKRSTITSEDVKLLARRSNSLLKYITQKSDELASSNMEQKEKKKK 113

[Close]

BLAST of IVF0024830 vs. ExPASy TrEMBL
Match: A0A5A7UM53 (Centromere protein S isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G002010 PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 6.1e-62
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFTTEQLAK 60
           METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFTTEQLAK
Sbjct: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFTTEQLAK 60

Query: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDR 120
           DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDR
Sbjct: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDR 120

Query: 121 DRGAVHIAEA 131
           DRGAVHIAEA
Sbjct: 121 DRGAVHIAEA 130

[Close]

BLAST of IVF0024830 vs. ExPASy TrEMBL
Match: A0A1S3B159 (centromere protein S isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484694 PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 6.1e-62
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFTTEQLAK 60
           METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFTTEQLAK
Sbjct: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFTTEQLAK 60

Query: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDR 120
           DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDR
Sbjct: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDR 120

Query: 121 DRGAVHIAEA 131
           DRGAVHIAEA
Sbjct: 121 DRGAVHIAEA 130

[Close]

BLAST of IVF0024830 vs. ExPASy TrEMBL
Match: A0A5D3BHQ8 (Centromere protein S isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004950 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.7e-59
Identity = 128/130 (98.46%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFTTEQLAK 60
           METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKF T+QLAK
Sbjct: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKF-TKQLAK 60

Query: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDR 120
           DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDR
Sbjct: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDR 120

Query: 121 DRGAVHIAEA 131
           DRGAVHIAEA
Sbjct: 121 DRGAVHIAEA 129

[Close]

BLAST of IVF0024830 vs. ExPASy TrEMBL
Match: A0A1S3B173 (centromere protein S isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484694 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.7e-59
Identity = 128/130 (98.46%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFTTEQLAK 60
           METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKF T+QLAK
Sbjct: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKF-TKQLAK 60

Query: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDR 120
           DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDR
Sbjct: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDR 120

Query: 121 DRGAVHIAEA 131
           DRGAVHIAEA
Sbjct: 121 DRGAVHIAEA 129

[Close]

BLAST of IVF0024830 vs. ExPASy TrEMBL
Match: A0A0A0LR97 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051770 PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 4.5e-57
Identity = 123/130 (94.62%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFTTEQLAK 60
           MET MEEDDSASELLRDRFRLS+ISIAEAEANKSGMEISEPVMTCVADLAFK+ T+QLAK
Sbjct: 1   METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKY-TKQLAK 60

Query: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDR 120
           DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLK KEPQSERKRKKAPKKDDR
Sbjct: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRKKAPKKDDR 120

Query: 121 DRGAVHIAEA 131
           DRGAVHIA+A
Sbjct: 121 DRGAVHIADA 129

[Close]

BLAST of IVF0024830 vs. NCBI nr
Match: XP_008440142.1 (PREDICTED: centromere protein S isoform X1 [Cucumis melo] >KAA0055356.1 centromere protein S isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 247 bits (630), Expect = 3.22e-82
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFTTEQLAK 60
           METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFTTEQLAK
Sbjct: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFTTEQLAK 60

Query: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDR 120
           DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDR
Sbjct: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDR 120

Query: 121 DRGAVHIAEA 130
           DRGAVHIAEA
Sbjct: 121 DRGAVHIAEA 130

[Close]

BLAST of IVF0024830 vs. NCBI nr
Match: XP_008440159.1 (PREDICTED: centromere protein S isoform X2 [Cucumis melo] >TYJ99282.1 centromere protein S isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 239 bits (609), Expect = 4.97e-79
Identity = 128/130 (98.46%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFTTEQLAK 60
           METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFT +QLAK
Sbjct: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFT-KQLAK 60

Query: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDR 120
           DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDR
Sbjct: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDR 120

Query: 121 DRGAVHIAEA 130
           DRGAVHIAEA
Sbjct: 121 DRGAVHIAEA 129

[Close]

BLAST of IVF0024830 vs. NCBI nr
Match: XP_011652290.1 (protein MHF1 homolog isoform X1 [Cucumis sativus] >XP_011652296.1 protein MHF1 homolog isoform X1 [Cucumis sativus])

HSP 1 Score: 239 bits (609), Expect = 5.14e-79
Identity = 125/130 (96.15%), Postives = 128/130 (98.46%), Query Frame = 0


Query: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFTTEQLAK 60
           MET MEEDDSASELLRDRFRLS+ISIAEAEANKSGMEISEPVMTCVADLAFK+TTEQLAK
Sbjct: 1   METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYTTEQLAK 60

Query: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDR 120
           DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLK KEPQSERKRKKAPKKDDR
Sbjct: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRKKAPKKDDR 120

Query: 121 DRGAVHIAEA 130
           DRGAVHIA+A
Sbjct: 121 DRGAVHIADA 130

[Close]

BLAST of IVF0024830 vs. NCBI nr
Match: XP_004154006.1 (protein MHF1 homolog isoform X2 [Cucumis sativus] >XP_004154007.1 protein MHF1 homolog isoform X2 [Cucumis sativus] >KGN64440.1 hypothetical protein Csa_013391 [Cucumis sativus])

HSP 1 Score: 231 bits (588), Expect = 7.93e-76
Identity = 123/130 (94.62%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFTTEQLAK 60
           MET MEEDDSASELLRDRFRLS+ISIAEAEANKSGMEISEPVMTCVADLAFK+T +QLAK
Sbjct: 1   METGMEEDDSASELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYT-KQLAK 60

Query: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDR 120
           DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLK KEPQSERKRKKAPKKDDR
Sbjct: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRKKAPKKDDR 120

Query: 121 DRGAVHIAEA 130
           DRGAVHIA+A
Sbjct: 121 DRGAVHIADA 129

[Close]

BLAST of IVF0024830 vs. NCBI nr
Match: XP_038894698.1 (protein MHF1 homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 226 bits (575), Expect = 7.86e-74
Identity = 117/130 (90.00%), Postives = 125/130 (96.15%), Query Frame = 0


Query: 1   METRMEEDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFTTEQLAK 60
           M+T +EED SASELLRDRFRLSTISIAEAEAN+SGMEISEPVMTCVADLAFK+TTEQLAK
Sbjct: 1   MKTGIEEDGSASELLRDRFRLSTISIAEAEANRSGMEISEPVMTCVADLAFKYTTEQLAK 60

Query: 61  DLELFAQHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKKAPKKDDR 120
           DLELF QHAGRKSVNTEDVIL+AHRNEHL+AILTSICNDLK KEPQSERKRKKAPKK+DR
Sbjct: 61  DLELFVQHAGRKSVNTEDVILSAHRNEHLSAILTSICNDLKTKEPQSERKRKKAPKKEDR 120

Query: 121 DRGAVHIAEA 130
           DRGAVHI +A
Sbjct: 121 DRGAVHIIDA 130

[Close]

BLAST of IVF0024830 vs. TAIR 10
Match: AT5G50930.1 (Histone superfamily protein )

HSP 1 Score: 148.3 bits (373), Expect = 4.3e-36
Identity = 80/115 (69.57%), Postives = 97/115 (84.35%), Query Frame = 0


Query: 7   EDDSASELLRDRFRLSTISIAEAEANKSGMEISEPVMTCVADLAFKFTTEQLAKDLELFA 66
           E+ S  +L+RDRFRLS ISIAEAEA K+GMEI  PV+ CVADLAFK+  E +AKDLELFA
Sbjct: 116 EEYSMDDLIRDRFRLSAISIAEAEAKKNGMEIGGPVVACVADLAFKY-AENVAKDLELFA 175

Query: 67  QHAGRKSVNTEDVILTAHRNEHLAAILTSICNDLKAKEPQSERKRKK-APKKDDR 121
            HAGRK VN +DV+L+AHRN++LAA L S+CN+LKAKEPQSERKRKK + KK+D+
Sbjct: 176 HHAGRKVVNMDDVVLSAHRNDNLAASLRSLCNELKAKEPQSERKRKKGSAKKEDK 229

The following BLAST results are available for this feature:

BLAST of IVF0024830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FI55	6.1e-35	69.57	Protein MHF1 homolog OS=Arabidopsis thaliana OX=3702 GN=MHF1 PE=3 SV=1	[more]
Q2TBR7	2.2e-08	36.19	Centromere protein S OS=Bos taurus OX=9913 GN=CENPS PE=2 SV=1	[more]
Q8N2Z9	9.2e-07	31.01	Centromere protein S OS=Homo sapiens OX=9606 GN=CENPS PE=1 SV=1	[more]
Q6NRI8	4.5e-06	28.32	Centromere protein S OS=Xenopus laevis OX=8355 GN=cenps PE=2 SV=1	[more]
E1BSW7	1.3e-05	27.78	Centromere protein S OS=Gallus gallus OX=9031 GN=CENPS PE=1 SV=2	[more]

BLAST of IVF0024830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UM53	6.1e-62	100.00	Centromere protein S isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A1S3B159	6.1e-62	100.00	centromere protein S isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484694 PE=3 SV=...	[more]
A0A5D3BHQ8	1.7e-59	98.46	Centromere protein S isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3B173	1.7e-59	98.46	centromere protein S isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484694 PE=3 SV=...	[more]
A0A0A0LR97	4.5e-57	94.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051770 PE=3 SV=1	[more]

BLAST of IVF0024830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440142.1	3.22e-82	100.00	PREDICTED: centromere protein S isoform X1 [Cucumis melo] >KAA0055356.1 centrome...	[more]
XP_008440159.1	4.97e-79	98.46	PREDICTED: centromere protein S isoform X2 [Cucumis melo] >TYJ99282.1 centromere...	[more]
XP_011652290.1	5.14e-79	96.15	protein MHF1 homolog isoform X1 [Cucumis sativus] >XP_011652296.1 protein MHF1 h...	[more]
XP_004154006.1	7.93e-76	94.62	protein MHF1 homolog isoform X2 [Cucumis sativus] >XP_004154007.1 protein MHF1 h...	[more]
XP_038894698.1	7.86e-74	90.00	protein MHF1 homolog isoform X1 [Benincasa hispida]	[more]

BLAST of IVF0024830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50930.1	4.3e-36	69.57	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029003	CENP-S/Mhf1	PFAM	PF15630	CENP-S	coord: 15..89 e-value: 1.6E-17 score: 63.6
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 1..114 e-value: 2.7E-29 score: 103.7
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 34..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..130
None	No IPR available	PANTHER	PTHR22980:SF0	CENTROMERE PROTEIN S	coord: 4..121
None	No IPR available	PANTHER	PTHR22980	CORTISTATIN	coord: 4..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0024830.3	IVF0024830.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007129	homologous chromosome pairing at meiosis
biological_process	GO:0036297	interstrand cross-link repair
biological_process	GO:0006312	mitotic recombination
biological_process	GO:0031297	replication fork processing
biological_process	GO:0000712	resolution of meiotic recombination intermediates
cellular_component	GO:0071821	FANCM-MHF complex
cellular_component	GO:0043240	Fanconi anaemia nuclear complex
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0046982	protein heterodimerization activity