IVF0024821 (gene) Melon (IVF77) v1

Overview


Name	IVF0024821
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Plant transposase
Location	chr01: 5643673 .. 5644221 (-)
RNA-Seq Expression	IVF0024821
Synteny	IVF0024821

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTTAACTCAACCTTCTACTGATGACGAGGAGAATGAAGGAGAAGCTCTTCATTTGAGAGAGAAAGAGATTAGGGAAACATCACCTCTTCCTGACCCACTTCCTGAGGAAGCTACTACTCCACTTCCATCTTCACATGTTAATGCAACCATTCATCCACAGTCTAAAAGACCACCAAATAGGCCGTTAGACTCACCTGCTGGTCGTACTAGATCAGCTGTTCGTAAATTACCCGTTGAAGAGGTTGAATCTCAGTTGGAAGAAAATGAAAATGTGGATTGTGAGGAAGTTCATACGAAGGAACCAAGTCCCAAAAAGACTAGAGGTCGTACGAAGATGCAAACAATAGCTATGGAGCCAGAAATGAAACTAGATATAAGGTACAATGGATATGGACAACCTATTGGAGAAACATCAGTTGGGTTGTCCTCATTCTTGGGTACATTAGTCAGAGAAGTGGTGCCAGTGAATGTTGAAACTTGGAAGAAAATTTCAACGAGACAAAAAGAAATATTGTGGCATTCTATTCAAGTATGTAATTTATAG

mRNA sequence

ATGGACTTAACTCAACCTTCTACTGATGACGAGGAGAATGAAGGAGAAGCTCTTCATTTGAGAGAGAAAGAGATTAGGGAAACATCACCTCTTCCTGACCCACTTCCTGAGGAAGCTACTACTCCACTTCCATCTTCACATGTTAATGCAACCATTCATCCACAGTCTAAAAGACCACCAAATAGGCCGTTAGACTCACCTGCTGGTCGTACTAGATCAGCTGTTCGTAAATTACCCGTTGAAGAGGTTGAATCTCAGTTGGAAGAAAATGAAAATGTGGATTGTGAGGAAGTTCATACGAAGGAACCAAGTCCCAAAAAGACTAGAGGTCGTACGAAGATGCAAACAATAGCTATGGAGCCAGAAATGAAACTAGATATAAGGTACAATGGATATGGACAACCTATTGGAGAAACATCAGTTGGGTTGTCCTCATTCTTGGGTACATTAGTCAGAGAAGTGGTGCCAGTGAATGTTGAAACTTGGAAGAAAATTTCAACGAGACAAAAAGAAATATTGTGGCATTCTATTCAAGTATGTAATTTATAG

Coding sequence (CDS)

ATGGACTTAACTCAACCTTCTACTGATGACGAGGAGAATGAAGGAGAAGCTCTTCATTTGAGAGAGAAAGAGATTAGGGAAACATCACCTCTTCCTGACCCACTTCCTGAGGAAGCTACTACTCCACTTCCATCTTCACATGTTAATGCAACCATTCATCCACAGTCTAAAAGACCACCAAATAGGCCGTTAGACTCACCTGCTGGTCGTACTAGATCAGCTGTTCGTAAATTACCCGTTGAAGAGGTTGAATCTCAGTTGGAAGAAAATGAAAATGTGGATTGTGAGGAAGTTCATACGAAGGAACCAAGTCCCAAAAAGACTAGAGGTCGTACGAAGATGCAAACAATAGCTATGGAGCCAGAAATGAAACTAGATATAAGGTACAATGGATATGGACAACCTATTGGAGAAACATCAGTTGGGTTGTCCTCATTCTTGGGTACATTAGTCAGAGAAGTGGTGCCAGTGAATGTTGAAACTTGGAAGAAAATTTCAACGAGACAAAAAGAAATATTGTGGCATTCTATTCAAGTATGTAATTTATAG

Protein sequence

MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPPNRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQVCNL

Homology

[Close]

BLAST of IVF0024821 vs. ExPASy TrEMBL
Match: A0A5A7UBP2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2606G00210 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 5.4e-93
Identity = 177/178 (99.44%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPP 60
           MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQS+RPP
Sbjct: 1   MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSRRPP 60

Query: 61  NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
           NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME
Sbjct: 61  NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120

Query: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 179
           PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ
Sbjct: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178

[Close]

BLAST of IVF0024821 vs. ExPASy TrEMBL
Match: A0A5A7SRN7 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00120 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 5.4e-93
Identity = 177/178 (99.44%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPP 60
           MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQS+RPP
Sbjct: 1   MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSRRPP 60

Query: 61  NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
           NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME
Sbjct: 61  NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120

Query: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 179
           PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ
Sbjct: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178

[Close]

BLAST of IVF0024821 vs. ExPASy TrEMBL
Match: A0A5A7TIU1 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G002550 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 2.7e-92
Identity = 176/178 (98.88%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 1   MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPP 60
           MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPP
Sbjct: 1   MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPP 60

Query: 61  NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
           NRPLDSPAG TRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME
Sbjct: 61  NRPLDSPAGCTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120

Query: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 179
           PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVN+ETWKKISTRQKEILWHSIQ
Sbjct: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNIETWKKISTRQKEILWHSIQ 178

[Close]

BLAST of IVF0024821 vs. ExPASy TrEMBL
Match: A0A5A7TLJ2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003690 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 1.8e-91
Identity = 174/178 (97.75%), Postives = 176/178 (98.88%), Query Frame = 0


Query: 1   MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPP 60
           MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQS++PP
Sbjct: 1   MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSRKPP 60

Query: 61  NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
           NRPLDSPAGRTR  VRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME
Sbjct: 61  NRPLDSPAGRTRLVVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120

Query: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 179
           PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ
Sbjct: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178

[Close]

BLAST of IVF0024821 vs. ExPASy TrEMBL
Match: A0A5A7UNU1 (Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold226G00350 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 9.6e-90
Identity = 174/182 (95.60%), Postives = 176/182 (96.70%), Query Frame = 0


Query: 1   MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPP 60
           MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPL EEATTPLPSSHVNATIHPQS+RPP
Sbjct: 1   MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLLEEATTPLPSSHVNATIHPQSRRPP 60

Query: 61  NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
           NRPLDSPAGRTRSAVRKL VEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME
Sbjct: 61  NRPLDSPAGRTRSAVRKLLVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120

Query: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQVC 180
           PEMKLDIRYNGYGQPIGETSVGLSSFLGTL REVVPVNV TWKKISTRQKEILWHSIQ+ 
Sbjct: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLFREVVPVNVATWKKISTRQKEILWHSIQMG 180

Query: 181 NL 183
            L
Sbjct: 181 GL 182

[Close]

BLAST of IVF0024821 vs. NCBI nr
Match: KAA0041269.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 350 bits (897), Expect = 8.66e-120
Identity = 176/178 (98.88%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 1   MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPP 60
           MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPP
Sbjct: 1   MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPP 60

Query: 61  NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
           NRPLDSPAG TRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME
Sbjct: 61  NRPLDSPAGCTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120

Query: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178
           PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVN+ETWKKISTRQKEILWHSIQ
Sbjct: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNIETWKKISTRQKEILWHSIQ 178

[Close]

BLAST of IVF0024821 vs. NCBI nr
Match: KAA0051001.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 352 bits (903), Expect = 8.19e-118
Identity = 177/178 (99.44%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPP 60
           MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQS+RPP
Sbjct: 1   MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSRRPP 60

Query: 61  NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
           NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME
Sbjct: 61  NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120

Query: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178
           PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ
Sbjct: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178

[Close]

BLAST of IVF0024821 vs. NCBI nr
Match: KAA0032201.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 352 bits (903), Expect = 2.32e-117
Identity = 177/178 (99.44%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPP 60
           MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQS+RPP
Sbjct: 1   MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSRRPP 60

Query: 61  NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
           NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME
Sbjct: 61  NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120

Query: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178
           PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ
Sbjct: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178

[Close]

BLAST of IVF0024821 vs. NCBI nr
Match: KAA0042856.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 347 bits (890), Expect = 2.45e-114
Identity = 174/178 (97.75%), Postives = 176/178 (98.88%), Query Frame = 0


Query: 1   MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPP 60
           MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQS++PP
Sbjct: 1   MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSRKPP 60

Query: 61  NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
           NRPLDSPAGRTR  VRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME
Sbjct: 61  NRPLDSPAGRTRLVVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120

Query: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178
           PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ
Sbjct: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178

[Close]

BLAST of IVF0024821 vs. NCBI nr
Match: KAA0056267.1 (uncharacterized protein E6C27_scaffold226G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 341 bits (874), Expect = 3.18e-114
Identity = 174/182 (95.60%), Postives = 176/182 (96.70%), Query Frame = 0


Query: 1   MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPP 60
           MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPL EEATTPLPSSHVNATIHPQS+RPP
Sbjct: 1   MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLLEEATTPLPSSHVNATIHPQSRRPP 60

Query: 61  NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
           NRPLDSPAGRTRSAVRKL VEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME
Sbjct: 61  NRPLDSPAGRTRSAVRKLLVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120

Query: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQVC 180
           PEMKLDIRYNGYGQPIGETSVGLSSFLGTL REVVPVNV TWKKISTRQKEILWHSIQ+ 
Sbjct: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLFREVVPVNVATWKKISTRQKEILWHSIQMG 180

Query: 181 NL 182
            L
Sbjct: 181 GL 182

The following BLAST results are available for this feature:

BLAST of IVF0024821 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0024821 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UBP2	5.4e-93	99.44	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2606G0...	[more]
A0A5A7SRN7	5.4e-93	99.44	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00...	[more]
A0A5A7TIU1	2.7e-92	98.88	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00...	[more]
A0A5A7TLJ2	1.8e-91	97.75	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003...	[more]
A0A5A7UNU1	9.6e-90	95.60	Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of IVF0024821 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0041269.1	8.66e-120	98.88	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0051001.1	8.19e-118	99.44	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0032201.1	2.32e-117	99.44	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0042856.1	2.45e-114	97.75	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0056267.1	3.18e-114	95.60	uncharacterized protein E6C27_scaffold226G00350 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0024821 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..56
None	No IPR available	PANTHER	PTHR33144	OS10G0409366 PROTEIN-RELATED	coord: 36..178
None	No IPR available	PANTHER	PTHR33144:SF27	SUBFAMILY NOT NAMED	coord: 36..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0024821.1	IVF0024821.1	mRNA