IVF0024744 (gene) Melon (IVF77) v1

Overview


Name	IVF0024744
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Pyruvate kinase
Location	chr09: 18281414 .. 18281645 (-)
RNA-Seq Expression	IVF0024744
Synteny	IVF0024744

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGGTATGGTTGGCTTCCTTAGCAACTCTCCTTTTGTTAAAGTAGGGAACTTTTGTTTTTCTATTCTTTCTTTGGTGGCTGCTAGTTGCTCAATTTGACTTTTCATGGGGTAGTCCGTATTACCATCAAGAGACTTTGGAAAATTTGAAGATGGCTGTTAAAAGCACCAAGAAACTTTGTGCTGTATGTTCGTTTTTAATATGTTTCAGTGTATATTTTATCATTTGA

mRNA sequence

ATGTCGGTTGCTCAATTTGACTTTTCATGGGGTAGTCCGTATTACCATCAAGAGACTTTGGAAAATTTGAAGATGGCTGTTAAAAGCACCAAGAAACTTTGTGCTGTATGTTCGTTTTTAATATGTTTCAGTGTATATTTTATCATTTGA

Coding sequence (CDS)

ATGTCGGTTGCTCAATTTGACTTTTCATGGGGTAGTCCGTATTACCATCAAGAGACTTTGGAAAATTTGAAGATGGCTGTTAAAAGCACCAAGAAACTTTGTGCTGTATGTTCGTTTTTAATATGTTTCAGTGTATATTTTATCATTTGA

Protein sequence

MSVAQFDFSWGSPYYHQETLENLKMAVKSTKKLCAVCSFLICFSVYFII

Homology

[Close]

BLAST of IVF0024744 vs. ExPASy Swiss-Prot
Match: B8BJ39 (Pyruvate kinase 1, cytosolic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_35105 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 3.9e-11
Identity = 30/36 (83.33%), Postives = 33/36 (91.67%), Query Frame = 0


Query: 1  MSVAQFDFSWGSPYYHQETLENLKMAVKSTKKLCAV 37
          MSVA+FDFSWG   YHQETLENLK+A+KSTKKLCAV
Sbjct: 54 MSVARFDFSWGDAEYHQETLENLKLAIKSTKKLCAV 89

[Close]

BLAST of IVF0024744 vs. ExPASy Swiss-Prot
Match: Q2RAK2 (Pyruvate kinase 1, cytosolic OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0148500 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 3.9e-11
Identity = 30/36 (83.33%), Postives = 33/36 (91.67%), Query Frame = 0


Query: 1  MSVAQFDFSWGSPYYHQETLENLKMAVKSTKKLCAV 37
          MSVA+FDFSWG   YHQETLENLK+A+KSTKKLCAV
Sbjct: 54 MSVARFDFSWGDAEYHQETLENLKLAIKSTKKLCAV 89

[Close]

BLAST of IVF0024744 vs. ExPASy Swiss-Prot
Match: B8BM17 (Pyruvate kinase 2, cytosolic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_37456 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 5.1e-11
Identity = 30/36 (83.33%), Postives = 33/36 (91.67%), Query Frame = 0


Query: 1  MSVAQFDFSWGSPYYHQETLENLKMAVKSTKKLCAV 37
          MSVA+FDFSWG   YHQETLENLK+A+KSTKKLCAV
Sbjct: 54 MSVARFDFSWGDAEYHQETLENLKVAIKSTKKLCAV 89

[Close]

BLAST of IVF0024744 vs. ExPASy Swiss-Prot
Match: Q2QXR8 (Pyruvate kinase 2, cytosolic OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0145700 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 5.1e-11
Identity = 30/36 (83.33%), Postives = 33/36 (91.67%), Query Frame = 0


Query: 1  MSVAQFDFSWGSPYYHQETLENLKMAVKSTKKLCAV 37
          MSVA+FDFSWG   YHQETLENLK+A+KSTKKLCAV
Sbjct: 54 MSVARFDFSWGDAEYHQETLENLKVAIKSTKKLCAV 89

[Close]

BLAST of IVF0024744 vs. ExPASy Swiss-Prot
Match: P22200 (Pyruvate kinase, cytosolic isozyme OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 8.5e-06
Identity = 22/36 (61.11%), Postives = 32/36 (88.89%), Query Frame = 0


Query: 1  MSVAQFDFSWGSPYYHQETLENLKMAVKSTKKLCAV 37
          M+VA+F+FS G+  YHQETL+NLK+A+++T+ LCAV
Sbjct: 46 MNVARFNFSHGTHEYHQETLDNLKIAMQNTQILCAV 81

[Close]

BLAST of IVF0024744 vs. ExPASy TrEMBL
Match: A0A5A7TSJ5 (Pyruvate kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G001130 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 6.3e-12
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0


Query: 1   MSVAQFDFSWGSPYYHQETLENLKMAVKSTKKLCAV 37
           MSVAQFDFSWGSPYYHQETLENLKMAVKSTKKLCAV
Sbjct: 77  MSVAQFDFSWGSPYYHQETLENLKMAVKSTKKLCAV 112

[Close]

BLAST of IVF0024744 vs. ExPASy TrEMBL
Match: A0A5A7TYA8 (Pyruvate kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G00890 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 6.3e-12
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0


Query: 1   MSVAQFDFSWGSPYYHQETLENLKMAVKSTKKLCAV 37
           MSVAQFDFSWGSPYYHQETLENLKMAVKSTKKLCAV
Sbjct: 77  MSVAQFDFSWGSPYYHQETLENLKMAVKSTKKLCAV 112

[Close]

BLAST of IVF0024744 vs. ExPASy TrEMBL
Match: A0A5D3C7Q7 (Pyruvate kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00900 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 7.7e-10
Identity = 33/36 (91.67%), Postives = 35/36 (97.22%), Query Frame = 0


Query: 1  MSVAQFDFSWGSPYYHQETLENLKMAVKSTKKLCAV 37
          MSVA+FDFSWGSP YHQETLENLK+AVKSTKKLCAV
Sbjct: 54 MSVARFDFSWGSPDYHQETLENLKIAVKSTKKLCAV 89

[Close]

BLAST of IVF0024744 vs. ExPASy TrEMBL
Match: A0A5A7SGM8 (Pyruvate kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G001520 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 7.7e-10
Identity = 33/36 (91.67%), Postives = 35/36 (97.22%), Query Frame = 0


Query: 1  MSVAQFDFSWGSPYYHQETLENLKMAVKSTKKLCAV 37
          MSVA+FDFSWGSP YHQETLENLK+AVKSTKKLCAV
Sbjct: 54 MSVARFDFSWGSPDYHQETLENLKIAVKSTKKLCAV 89

[Close]

BLAST of IVF0024744 vs. ExPASy TrEMBL
Match: A0A3S4NYX8 (Pyruvate kinase OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_01225500 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 7.7e-10
Identity = 33/36 (91.67%), Postives = 34/36 (94.44%), Query Frame = 0


Query: 1  MSVAQFDFSWGSPYYHQETLENLKMAVKSTKKLCAV 37
          MSVA+FDFSWG P YHQETLENLKMAVKSTKKLCAV
Sbjct: 54 MSVARFDFSWGDPDYHQETLENLKMAVKSTKKLCAV 89

[Close]

BLAST of IVF0024744 vs. NCBI nr
Match: KAA0046382.1 (pyruvate kinase 2, cytosolic-like [Cucumis melo var. makuwa])

HSP 1 Score: 78.2 bits (191), Expect = 3.45e-15
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0


Query: 1   MSVAQFDFSWGSPYYHQETLENLKMAVKSTKKLCAV 36
           MSVAQFDFSWGSPYYHQETLENLKMAVKSTKKLCAV
Sbjct: 77  MSVAQFDFSWGSPYYHQETLENLKMAVKSTKKLCAV 112

[Close]

BLAST of IVF0024744 vs. NCBI nr
Match: KAA0046375.1 (pyruvate kinase 1, cytosolic [Cucumis melo var. makuwa])

HSP 1 Score: 78.2 bits (191), Expect = 3.59e-15
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0


Query: 1   MSVAQFDFSWGSPYYHQETLENLKMAVKSTKKLCAV 36
           MSVAQFDFSWGSPYYHQETLENLKMAVKSTKKLCAV
Sbjct: 77  MSVAQFDFSWGSPYYHQETLENLKMAVKSTKKLCAV 112

[Close]

BLAST of IVF0024744 vs. NCBI nr
Match: XP_008467042.1 (PREDICTED: pyruvate kinase 2, cytosolic-like [Cucumis melo])

HSP 1 Score: 68.9 bits (167), Expect = 1.18e-13
Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = 0


Query: 1  MSVAQFDFSWGSPYYHQETLENLKMAVKSTKKLCAV 36
          MSVA+FD SWGSP YHQETLENLK+AVKSTKKLCAV
Sbjct: 26 MSVARFDISWGSPDYHQETLENLKIAVKSTKKLCAV 61

[Close]

BLAST of IVF0024744 vs. NCBI nr
Match: TQD94387.1 (hypothetical protein C1H46_019987 [Malus baccata])

HSP 1 Score: 69.7 bits (169), Expect = 1.00e-12
Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = 0


Query: 1  MSVAQFDFSWGSPYYHQETLENLKMAVKSTKKLCAV 36
          MSVA+FDFSWG+P YHQETLENLK AVKSTKKLCAV
Sbjct: 54 MSVARFDFSWGNPEYHQETLENLKAAVKSTKKLCAV 89

[Close]

BLAST of IVF0024744 vs. NCBI nr
Match: RWR83499.1 (pyruvate kinase 1, cytosolic-like protein [Cinnamomum micranthum f. kanehirae])

HSP 1 Score: 71.2 bits (173), Expect = 1.00e-12
Identity = 33/36 (91.67%), Postives = 34/36 (94.44%), Query Frame = 0


Query: 1  MSVAQFDFSWGSPYYHQETLENLKMAVKSTKKLCAV 36
          MSVA+FDFSWG P YHQETLENLKMAVKSTKKLCAV
Sbjct: 54 MSVARFDFSWGDPDYHQETLENLKMAVKSTKKLCAV 89

[Close]

BLAST of IVF0024744 vs. TAIR 10
Match: AT3G52990.1 (Pyruvate kinase family protein )

HSP 1 Score: 65.1 bits (157), Expect = 1.8e-11
Identity = 29/36 (80.56%), Postives = 33/36 (91.67%), Query Frame = 0


Query: 1  MSVAQFDFSWGSPYYHQETLENLKMAVKSTKKLCAV 37
          MSVA+FDFSWG   YHQETL+NLK+AV+STKKLCAV
Sbjct: 54 MSVARFDFSWGDADYHQETLDNLKVAVRSTKKLCAV 89

[Close]

BLAST of IVF0024744 vs. TAIR 10
Match: AT3G52990.2 (Pyruvate kinase family protein )

HSP 1 Score: 65.1 bits (157), Expect = 1.8e-11
Identity = 29/36 (80.56%), Postives = 33/36 (91.67%), Query Frame = 0


Query: 1  MSVAQFDFSWGSPYYHQETLENLKMAVKSTKKLCAV 37
          MSVA+FDFSWG   YHQETL+NLK+AV+STKKLCAV
Sbjct: 1  MSVARFDFSWGDADYHQETLDNLKVAVRSTKKLCAV 36

[Close]

BLAST of IVF0024744 vs. TAIR 10
Match: AT2G36580.1 (Pyruvate kinase family protein )

HSP 1 Score: 63.9 bits (154), Expect = 4.0e-11
Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = 0


Query: 1  MSVAQFDFSWGSPYYHQETLENLKMAVKSTKKLCAV 37
          MSVA+FDFSW    YHQETLENLK+AVKSTKKLCAV
Sbjct: 54 MSVARFDFSWCDADYHQETLENLKIAVKSTKKLCAV 89

[Close]

BLAST of IVF0024744 vs. TAIR 10
Match: AT4G26390.1 (Pyruvate kinase family protein )

HSP 1 Score: 48.9 bits (115), Expect = 1.3e-06
Identity = 23/36 (63.89%), Postives = 29/36 (80.56%), Query Frame = 0


Query: 1  MSVAQFDFSWGSPYYHQETLENLKMAVKSTKKLCAV 37
          MSVA+F+FS GS  YHQETL+NL+ A+ +T  LCAV
Sbjct: 33 MSVARFNFSHGSYEYHQETLDNLRQAMLNTGMLCAV 68

[Close]

BLAST of IVF0024744 vs. TAIR 10
Match: AT3G25960.1 (Pyruvate kinase family protein )

HSP 1 Score: 47.4 bits (111), Expect = 3.9e-06
Identity = 22/36 (61.11%), Postives = 29/36 (80.56%), Query Frame = 0


Query: 1  MSVAQFDFSWGSPYYHQETLENLKMAVKSTKKLCAV 37
          M+VA+F+FS GS  YHQETL+NL+ A+ +T  LCAV
Sbjct: 42 MNVARFNFSHGSHSYHQETLDNLRTAMDNTGILCAV 77

The following BLAST results are available for this feature:

BLAST of IVF0024744 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8BJ39	3.9e-11	83.33	Pyruvate kinase 1, cytosolic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_35105...	[more]
Q2RAK2	3.9e-11	83.33	Pyruvate kinase 1, cytosolic OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g01...	[more]
B8BM17	5.1e-11	83.33	Pyruvate kinase 2, cytosolic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_37456...	[more]
Q2QXR8	5.1e-11	83.33	Pyruvate kinase 2, cytosolic OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g01...	[more]
P22200	8.5e-06	61.11	Pyruvate kinase, cytosolic isozyme OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]

BLAST of IVF0024744 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TSJ5	6.3e-12	100.00	Pyruvate kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G0011...	[more]
A0A5A7TYA8	6.3e-12	100.00	Pyruvate kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G0089...	[more]
A0A5D3C7Q7	7.7e-10	91.67	Pyruvate kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G0090...	[more]
A0A5A7SGM8	7.7e-10	91.67	Pyruvate kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G0015...	[more]
A0A3S4NYX8	7.7e-10	91.67	Pyruvate kinase OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_01225500...	[more]

BLAST of IVF0024744 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046382.1	3.45e-15	100.00	pyruvate kinase 2, cytosolic-like [Cucumis melo var. makuwa]	[more]
KAA0046375.1	3.59e-15	100.00	pyruvate kinase 1, cytosolic [Cucumis melo var. makuwa]	[more]
XP_008467042.1	1.18e-13	88.89	PREDICTED: pyruvate kinase 2, cytosolic-like [Cucumis melo]	[more]
TQD94387.1	1.00e-12	88.89	hypothetical protein C1H46_019987 [Malus baccata]	[more]
RWR83499.1	1.00e-12	91.67	pyruvate kinase 1, cytosolic-like protein [Cinnamomum micranthum f. kanehirae]	[more]

BLAST of IVF0024744 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52990.1	1.8e-11	80.56	Pyruvate kinase family protein	[more]
AT3G52990.2	1.8e-11	80.56	Pyruvate kinase family protein	[more]
AT2G36580.1	4.0e-11	83.33	Pyruvate kinase family protein	[more]
AT4G26390.1	1.3e-06	63.89	Pyruvate kinase family protein	[more]
AT3G25960.1	3.9e-06	61.11	Pyruvate kinase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040442	Pyruvate kinase-like domain superfamily	GENE3D	3.20.20.60		coord: 1..37 e-value: 2.3E-5 score: 25.4
None	No IPR available	PANTHER	PTHR11817:SF61	PYRUVATE KINASE	coord: 1..37
IPR001697	Pyruvate kinase	PANTHER	PTHR11817	PYRUVATE KINASE	coord: 1..37

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0024744.1	IVF0024744.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006096	glycolytic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0030955	potassium ion binding
molecular_function	GO:0004743	pyruvate kinase activity