IVF0024606 (gene) Melon (IVF77) v1

Overview


Name	IVF0024606
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Glutaredoxin
Location	chr11: 26817929 .. 26818377 (+)
RNA-Seq Expression	IVF0024606
Synteny	IVF0024606

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTCTTCTTCTATTTCCTTCTCTGTGTTCTTAAGCTCTCAAACTACATATATACATCAATGGAGACTGTGAACAAGTTGGTTTCTGATAGACCAGTGGTGGTTTTCAGCAAGAATAGTTGCTGTATGAGCCACTCTATCAAGACACTCTTGTGTGATTTTGGAGTTAACCCGACGGTGTACGAGCTCGACGAGCTTCCTAGAGGGAAAGAGATAGAACAAGCTCTTCTTCGGATTGGTTGTAACCCTGCCGTACCTGCCGTGTTCATTGGTGGGGAACTGGTCGGTGGCGCTAATGAAGTCATGAGTCTTCATCTTAAGCGCAACCTGATCCCAATGCTTAGGAAGGCTGGTGCTTTATGGGTTTAAACCTTCTTGCTCTCTAACTTGATGTAACTTTGACATAGCCAAGCTTTCCTATAATATATATAAATAGGCAGAAATGGCAC

mRNA sequence

ATTTTCTTCTTCTATTTCCTTCTCTGTGTTCTTAAGCTCTCAAACTACATATATACATCAATGGAGACTGTGAACAAGTTGGTTTCTGATAGACCAGTGGTGGTTTTCAGCAAGAATAGTTGCTGTATGAGCCACTCTATCAAGACACTCTTGTGTGATTTTGGAGTTAACCCGACGGTGTACGAGCTCGACGAGCTTCCTAGAGGGAAAGAGATAGAACAAGCTCTTCTTCGGATTGGTTGTAACCCTGCCGTACCTGCCGTGTTCATTGGTGGGGAACTGGTCGGTGGCGCTAATGAAGTCATGAGTCTTCATCTTAAGCGCAACCTGATCCCAATGCTTAGGAAGGCTGGTGCTTTATGGGTTTAAACCTTCTTGCTCTCTAACTTGATGTAACTTTGACATAGCCAAGCTTTCCTATAATATATATAAATAGGCAGAAATGGCAC

Coding sequence (CDS)

ATGGAGACTGTGAACAAGTTGGTTTCTGATAGACCAGTGGTGGTTTTCAGCAAGAATAGTTGCTGTATGAGCCACTCTATCAAGACACTCTTGTGTGATTTTGGAGTTAACCCGACGGTGTACGAGCTCGACGAGCTTCCTAGAGGGAAAGAGATAGAACAAGCTCTTCTTCGGATTGGTTGTAACCCTGCCGTACCTGCCGTGTTCATTGGTGGGGAACTGGTCGGTGGCGCTAATGAAGTCATGAGTCTTCATCTTAAGCGCAACCTGATCCCAATGCTTAGGAAGGCTGGTGCTTTATGGGTTTAA

Protein sequence

METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIGCNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV

Homology

[Close]

BLAST of IVF0024606 vs. ExPASy Swiss-Prot
Match: Q8L8Z8 (Monothiol glutaredoxin-S2 OS=Arabidopsis thaliana OX=3702 GN=GRXS2 PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 3.6e-43
Identity = 78/102 (76.47%), Postives = 93/102 (91.18%), Query Frame = 0


Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           M+ + K+V +RPVV++SK+SCCMSH+IKTLLCDFG NP VYELDE+ RG+EIEQALLR+G
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           C+PAVP VFIGGELVGGANEVMSLHL  +LIPML++AGALWV
Sbjct: 61  CSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]

BLAST of IVF0024606 vs. ExPASy Swiss-Prot
Match: O23419 (Monothiol glutaredoxin-S4 OS=Arabidopsis thaliana OX=3702 GN=GRXS4 PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 2.9e-40
Identity = 71/102 (69.61%), Postives = 91/102 (89.22%), Query Frame = 0


Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           M+ + K++S++ VV+FSKNSCCMSH+IKTL  DFGVNPT+YELDE+ RGKEIEQAL ++G
Sbjct: 1   MDKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           C+P VP VFIGG+LVGGAN+VMSLHL R+L+PML++ GALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

[Close]

BLAST of IVF0024606 vs. ExPASy Swiss-Prot
Match: O23421 (Monothiol glutaredoxin-S3 OS=Arabidopsis thaliana OX=3702 GN=GRXS3 PE=3 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 4.9e-40
Identity = 71/102 (69.61%), Postives = 90/102 (88.24%), Query Frame = 0


Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           ME + K++S++ VV+FSKNSCCMSH+IKTL  D GVNPT+YELDE+ RGKEIE AL ++G
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           C+P VP VFIGG+LVGGAN+VMSLHL R+L+PML++AGALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of IVF0024606 vs. ExPASy Swiss-Prot
Match: O23420 (Monothiol glutaredoxin-S5 OS=Arabidopsis thaliana OX=3702 GN=GRXS5 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 6.4e-40
Identity = 71/102 (69.61%), Postives = 91/102 (89.22%), Query Frame = 0


Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           ME + K++S++ VV+FSKNSCCMSH+IKTL  DFGVNPT+YELDE+  G+EIEQAL ++G
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDFGVNPTIYELDEINIGREIEQALAQLG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           C+P VP VFIGG+LVGGAN+VMSLHL R+L+PML++AGALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of IVF0024606 vs. ExPASy Swiss-Prot
Match: Q6NLU2 (Monothiol glutaredoxin-S7 OS=Arabidopsis thaliana OX=3702 GN=GRXS7 PE=1 SV=2)

HSP 1 Score: 162.5 bits (410), Expect = 2.4e-39
Identity = 71/102 (69.61%), Postives = 89/102 (87.25%), Query Frame = 0


Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           ME + K+ S++ +V+FSKNSCCMSH+IKTL  D GVNPT+YELDE+ RGKEIEQAL ++G
Sbjct: 1   MEKLQKMTSEKSLVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEQALAQLG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           C+P VP VFIGG+LVGGAN+VMSLHL R+LIPML++ GALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLIPMLKRVGALWL 102

[Close]

BLAST of IVF0024606 vs. ExPASy TrEMBL
Match: U3RJA0 (Glutaredoxin OS=Cucumis sativus OX=3659 GN=GRX3 PE=2 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.3e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG
Sbjct: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV
Sbjct: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 102

[Close]

BLAST of IVF0024606 vs. ExPASy TrEMBL
Match: A0A1S3C966 (monothiol glutaredoxin-S2-like OS=Cucumis melo OX=3656 GN=LOC103497874 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.3e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG
Sbjct: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV
Sbjct: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 102

[Close]

BLAST of IVF0024606 vs. ExPASy TrEMBL
Match: A0A6J1H5P2 (monothiol glutaredoxin-S2-like OS=Cucurbita moschata OX=3662 GN=LOC111460348 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 8.4e-51
Identity = 99/102 (97.06%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           METVNKLVSDRPVVVFSKN+CCMSHSIKTLLCDFGVNPTVYELDELPRGKE+EQALLRIG
Sbjct: 1   METVNKLVSDRPVVVFSKNTCCMSHSIKTLLCDFGVNPTVYELDELPRGKEVEQALLRIG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLR+AGALWV
Sbjct: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRRAGALWV 102

[Close]

BLAST of IVF0024606 vs. ExPASy TrEMBL
Match: A0A6J1L1P0 (monothiol glutaredoxin-S2-like OS=Cucurbita maxima OX=3661 GN=LOC111499047 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 5.5e-50
Identity = 99/102 (97.06%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           METVNKLVSDRPVVVFSKN+CCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALL IG
Sbjct: 1   METVNKLVSDRPVVVFSKNTCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLCIG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLR+AGALWV
Sbjct: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRRAGALWV 102

[Close]

BLAST of IVF0024606 vs. ExPASy TrEMBL
Match: A0A6J1CAB1 (monothiol glutaredoxin-S2-like OS=Momordica charantia OX=3673 GN=LOC111009835 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.3e-48
Identity = 96/99 (96.97%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 4   VNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIGCNP 63
           V+KLV+DRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQAL RIGCNP
Sbjct: 5   VSKLVADRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALTRIGCNP 64

Query: 64  AVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           AVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV
Sbjct: 65  AVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103

[Close]

BLAST of IVF0024606 vs. NCBI nr
Match: NP_001274383.1 (monothiol glutaredoxin-S2-like [Cucumis sativus] >XP_008458479.1 PREDICTED: monothiol glutaredoxin-S2-like [Cucumis melo] >XP_038875298.1 monothiol glutaredoxin-S2-like [Benincasa hispida] >AGX01495.1 glutaredoxin [Cucumis sativus])

HSP 1 Score: 210 bits (535), Expect = 1.26e-68
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG
Sbjct: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 102
           CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV
Sbjct: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 102

[Close]

BLAST of IVF0024606 vs. NCBI nr
Match: XP_022959348.1 (monothiol glutaredoxin-S2-like [Cucurbita moschata] >KAG6575052.1 Monothiol glutaredoxin-S2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 207 bits (528), Expect = 1.48e-67
Identity = 99/102 (97.06%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           METVNKLVSDRPVVVFSKN+CCMSHSIKTLLCDFGVNPTVYELDELPRGKE+EQALLRIG
Sbjct: 1   METVNKLVSDRPVVVFSKNTCCMSHSIKTLLCDFGVNPTVYELDELPRGKEVEQALLRIG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 102
           CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLR+AGALWV
Sbjct: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRRAGALWV 102

[Close]

BLAST of IVF0024606 vs. NCBI nr
Match: KAE8646985.1 (hypothetical protein Csa_020989 [Cucumis sativus])

HSP 1 Score: 209 bits (532), Expect = 3.55e-67
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG
Sbjct: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 102
           CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALW+
Sbjct: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWL 102

[Close]

BLAST of IVF0024606 vs. NCBI nr
Match: XP_023006259.1 (monothiol glutaredoxin-S2-like [Cucurbita maxima])

HSP 1 Score: 205 bits (521), Expect = 1.73e-66
Identity = 99/102 (97.06%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           METVNKLVSDRPVVVFSKN+CCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALL IG
Sbjct: 1   METVNKLVSDRPVVVFSKNTCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLCIG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 102
           CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLR+AGALWV
Sbjct: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRRAGALWV 102

[Close]

BLAST of IVF0024606 vs. NCBI nr
Match: XP_023548757.1 (monothiol glutaredoxin-S2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 203 bits (517), Expect = 7.04e-66
Identity = 97/102 (95.10%), Postives = 100/102 (98.04%), Query Frame = 0


Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           METVNKLVSDRPVVVFSKN+CCMSHSIKTLLCDFGVNPTVYELDELP GKE+EQALLRIG
Sbjct: 1   METVNKLVSDRPVVVFSKNTCCMSHSIKTLLCDFGVNPTVYELDELPGGKEVEQALLRIG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 102
           CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLR+AG LWV
Sbjct: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRRAGGLWV 102

[Close]

BLAST of IVF0024606 vs. TAIR 10
Match: AT5G18600.1 (Thioredoxin superfamily protein )

HSP 1 Score: 175.3 bits (443), Expect = 2.6e-44
Identity = 78/102 (76.47%), Postives = 93/102 (91.18%), Query Frame = 0


Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           M+ + K+V +RPVV++SK+SCCMSH+IKTLLCDFG NP VYELDE+ RG+EIEQALLR+G
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           C+PAVP VFIGGELVGGANEVMSLHL  +LIPML++AGALWV
Sbjct: 61  CSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]

BLAST of IVF0024606 vs. TAIR 10
Match: AT4G15680.1 (Thioredoxin superfamily protein )

HSP 1 Score: 165.6 bits (418), Expect = 2.1e-41
Identity = 71/102 (69.61%), Postives = 91/102 (89.22%), Query Frame = 0


Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           M+ + K++S++ VV+FSKNSCCMSH+IKTL  DFGVNPT+YELDE+ RGKEIEQAL ++G
Sbjct: 1   MDKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           C+P VP VFIGG+LVGGAN+VMSLHL R+L+PML++ GALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

[Close]

BLAST of IVF0024606 vs. TAIR 10
Match: AT4G15700.1 (Thioredoxin superfamily protein )

HSP 1 Score: 164.9 bits (416), Expect = 3.5e-41
Identity = 71/102 (69.61%), Postives = 90/102 (88.24%), Query Frame = 0


Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           ME + K++S++ VV+FSKNSCCMSH+IKTL  D GVNPT+YELDE+ RGKEIE AL ++G
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           C+P VP VFIGG+LVGGAN+VMSLHL R+L+PML++AGALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of IVF0024606 vs. TAIR 10
Match: AT4G15690.1 (Thioredoxin superfamily protein )

HSP 1 Score: 164.5 bits (415), Expect = 4.6e-41
Identity = 71/102 (69.61%), Postives = 91/102 (89.22%), Query Frame = 0


Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           ME + K++S++ VV+FSKNSCCMSH+IKTL  DFGVNPT+YELDE+  G+EIEQAL ++G
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDFGVNPTIYELDEINIGREIEQALAQLG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           C+P VP VFIGG+LVGGAN+VMSLHL R+L+PML++AGALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of IVF0024606 vs. TAIR 10
Match: AT4G15670.1 (Thioredoxin superfamily protein )

HSP 1 Score: 162.5 bits (410), Expect = 1.7e-40
Identity = 71/102 (69.61%), Postives = 89/102 (87.25%), Query Frame = 0


Query: 1   METVNKLVSDRPVVVFSKNSCCMSHSIKTLLCDFGVNPTVYELDELPRGKEIEQALLRIG 60
           ME + K+ S++ +V+FSKNSCCMSH+IKTL  D GVNPT+YELDE+ RGKEIEQAL ++G
Sbjct: 1   MEKLQKMTSEKSLVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEQALAQLG 60

Query: 61  CNPAVPAVFIGGELVGGANEVMSLHLKRNLIPMLRKAGALWV 103
           C+P VP VFIGG+LVGGAN+VMSLHL R+LIPML++ GALW+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLIPMLKRVGALWL 102

The following BLAST results are available for this feature:

BLAST of IVF0024606 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8Z8	3.6e-43	76.47	Monothiol glutaredoxin-S2 OS=Arabidopsis thaliana OX=3702 GN=GRXS2 PE=3 SV=1	[more]
O23419	2.9e-40	69.61	Monothiol glutaredoxin-S4 OS=Arabidopsis thaliana OX=3702 GN=GRXS4 PE=3 SV=1	[more]
O23421	4.9e-40	69.61	Monothiol glutaredoxin-S3 OS=Arabidopsis thaliana OX=3702 GN=GRXS3 PE=3 SV=1	[more]
O23420	6.4e-40	69.61	Monothiol glutaredoxin-S5 OS=Arabidopsis thaliana OX=3702 GN=GRXS5 PE=3 SV=1	[more]
Q6NLU2	2.4e-39	69.61	Monothiol glutaredoxin-S7 OS=Arabidopsis thaliana OX=3702 GN=GRXS7 PE=1 SV=2	[more]

BLAST of IVF0024606 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
U3RJA0	1.3e-51	100.00	Glutaredoxin OS=Cucumis sativus OX=3659 GN=GRX3 PE=2 SV=1	[more]
A0A1S3C966	1.3e-51	100.00	monothiol glutaredoxin-S2-like OS=Cucumis melo OX=3656 GN=LOC103497874 PE=3 SV=1	[more]
A0A6J1H5P2	8.4e-51	97.06	monothiol glutaredoxin-S2-like OS=Cucurbita moschata OX=3662 GN=LOC111460348 PE=...	[more]
A0A6J1L1P0	5.5e-50	97.06	monothiol glutaredoxin-S2-like OS=Cucurbita maxima OX=3661 GN=LOC111499047 PE=3 ...	[more]
A0A6J1CAB1	2.3e-48	96.97	monothiol glutaredoxin-S2-like OS=Momordica charantia OX=3673 GN=LOC111009835 PE...	[more]

BLAST of IVF0024606 vs. NCBI nr


Match Name	E-value	Identity	Description
NP_001274383.1	1.26e-68	100.00	monothiol glutaredoxin-S2-like [Cucumis sativus] >XP_008458479.1 PREDICTED: mono...	[more]
XP_022959348.1	1.48e-67	97.06	monothiol glutaredoxin-S2-like [Cucurbita moschata] >KAG6575052.1 Monothiol glut...	[more]
KAE8646985.1	3.55e-67	99.02	hypothetical protein Csa_020989 [Cucumis sativus]	[more]
XP_023006259.1	1.73e-66	97.06	monothiol glutaredoxin-S2-like [Cucurbita maxima]	[more]
XP_023548757.1	7.04e-66	95.10	monothiol glutaredoxin-S2-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0024606 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G18600.1	2.6e-44	76.47	Thioredoxin superfamily protein	[more]
AT4G15680.1	2.1e-41	69.61	Thioredoxin superfamily protein	[more]
AT4G15700.1	3.5e-41	69.61	Thioredoxin superfamily protein	[more]
AT4G15690.1	4.6e-41	69.61	Thioredoxin superfamily protein	[more]
AT4G15670.1	1.7e-40	69.61	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 72..85 score: 26.19 coord: 58..71 score: 34.23 coord: 13..31 score: 37.06
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..101 e-value: 2.9E-30 score: 106.2
None	No IPR available	PANTHER	PTHR10168:SF239	MONOTHIOL GLUTAREDOXIN-S2	coord: 1..101
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 1..101 score: 22.773977
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 12..93 e-value: 5.92468E-38 score: 120.337
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 13..75 e-value: 2.7E-13 score: 49.9
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 4..102 e-value: 1.8E-44 score: 147.7
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 1..101
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 1..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0024606.1	IVF0024606.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0097573	glutathione oxidoreductase activity