IVF0024579 (gene) Melon (IVF77) v1

Overview


Name	IVF0024579
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	transcription initiation factor TFIID subunit 4b
Location	chr04: 648240 .. 655687 (+)
RNA-Seq Expression	IVF0024579
Synteny	IVF0024579

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCCATCTATTATGAAGCTTCTGGAGGATGACGAGGTTTTATCTCTTTTTGTGCTTGCGTGTAAACGTTTATCCTAGGACTGAGGGGATACTATTTGTAAATGTTTGTTGTGTTCGACAGGATGAATCAATGCATTCAGGTGCAGCTGTGGATGCTTTTCAGGCTGCCTTGAATAGAGACATAGAAGGCGACGCTCAGGCTGTTTCCCAGACTTCTGAATCTGATGCAGGTATACTTCATTGTAAACATAGATGCTTAGCTTTTATTAATAGATCTTGTATTGGAAATAAGTATACACACGCATTCAGATAAGAAACAGTTTCATTGATGGTATGAAATTATTAAAGATGGGTCCTATTTCGAGGATCTATAAAAGACTTCTCCAATTAGTGAGGAGGGAAGAAAGCTATAGCAATGAAAAAGAGGAGAACATTTGCACCATGTCACAACCAAACCTTTTTTTGATATCCGTGAGTGTCCGGGCCAACTTACGCGCACTTCGACTAATCTCATGAGACAATTTGTTTGACCGTACAACATTTGGGTGTAAAGGAAACTCGTAAGCAATTAATTTACTAGGTAGGTGACCACCATGGATTGAACCTATTATCCACTTAGTTAGTTATTGAGACTATGTCTCCCTTCTTACCGCCAGGCCAACCCACGATTGTTTTATTTCACAACCAAACTAATTATAGGTCAATAAATCTAGGATAGATAAGCTCCTTTTCTTGGTAGTTTCTACTATTTTGTCCTTGCCAAATAGTTTAGTGGAATGTTCTCACAAAATGGTCTTATAGAGGCTAATTTTCCTTTTCGAATGGATGACTGCCTAAAGTATATGCAAGGAAGATCTTTATGTCCCTCGTTGGGTCGTTGGGGCCATGTGCGTGTGCCGACGAATGAATTTTGTTGGCGATTCCAAAAATTTCAAGCAAACACACTATGTTGCAAAGAGATGACCTTGGGATTCCAAGCTCTTCCTACAAATGATGCACCATCGAGGAGATAAGTTCTAGTGGAGGTCTACTTCGAAGTTCATTTGTGTAAATGGCTTTACGAGATGGCTCCCATAGAAAGAATTTGATCTTTTTAGGCATGTGTGCTTTCCGTATCAAATCATTGGAAATCATAAAGCTGCGGAGAGGAATTGGTGGATGCTTGATGGAGTTACTTTAAGGAGGGAGCTTGAAAAAAAGACATTGTTCATTTCCATATTCCAAATACCCTTTTTCCAAATATCCCTGTTGGGTCTTTGACAGATACTTGGAAAATAATAAGGGAGGCTTTTTATAGAGATCATATTGAAATGTGCATTTGCAGAAAATGTTGTCTATGAAAGGTATTCTGTGATTTTAATGGCTTGGAGGCTCAAAATCTAATTTACCACCGGTATATCGGATTTCAAGTTGTGTCTTGTTGAGGTTTCTTGTCTCTCTTTGGGCCTTGCCATTTCGGTTTTGAAGGTCTTTTGTAATTACTCTATTGATAGTTTTTTATCTAGTTGGAAACCTTTTCTTTAGCGGGGTTCTTTTTTCGGTGGCTTGTTTTTCTGGTTCCTTGTATTCTTTCACTTTTTCTCAATGAAAGTTGTTTCTATAAAAAATGTTTTTCTTGTTACATATACATATGCTGCCTTTCCTACAGTATAGATTTAAGTAAACAAATTTCTATTTCAGCTCTTAAAATGAGTTGGAAGTTGGATCATTTGTTAACACCCACTTTAGTATTGTTTTGGTGGTGACTTAATATATTTACAGTTTTGATGTGAAGATATTTTTACCTTTTTTTGTTCTTATATTGTGCTTCCTTTTCATAGCTTTGCCTCAATCTCTATCTTGAAACTTTGTGAAGATTTCCAGTGTAACAATGATTTTTTTTCCCATTTTCCTTTTTCTTTCTGAATGGGTGTTACATTTATTTCAAAATGTTGGATTTTTAGGTTCCTATAATTTTTGTGTGCACATTTTCTTAATATGATCTTTCTTAAGGCTTTTCAAATAATCTGATATTAAAGTTTGACTGATCACAAACTGCACTTTCTTTTCCTAGTAAATAAAGAAAATTTGCTGTAACTATGTAGTGTGTAGAAAATATGTGTTTAAGTCCAAGAATAAAGCTTTCCATTGAGTGACTCATGGATGTTCGGATGGAAATTTGGAATTGTTGATTTGATGTTTGTGACTAAAATGCAGCCTTCCCTCAGGGGAATAACAATGGTTCTTCTACCCTCTCGTTACAAGCTTCTAGTCAAAGTGAAAATACTGAATCTCATGTGCAACAAAATCAAAATTTTCGTTTAAAGCAAGAACAACATTCATCTCTTATGGAGCTAGACCGATCAGTACCTGAAAATCAGCAGCAACACAGTTCTGCCCCCTTTCAAGTTTCAAAGAATCAACCCCAAGCAGATCGTGAGCAAGGGGAGGGAGAACAAGTTTCTGCTCAGTTTTCTCAAACAGCAGGGCTGCAAGTTTCTGAAAAAGCTCCAATCCTTGTGAATGACTCAAACAGAATGCAGAATCGGGACAATGAATCTCAATACTTGAAGTTACAAAAGATGAGTAATCAGCAGTCAATAGTTGCAGAACAGGCAAATAACCCTCTAAACCGTAGCAAACAGGTTCCTTTTGCCTCTTTGATGCCTGTATTGATGCCTCAGCTTGATAAAGACAGAGGCATGCAGCTTCAGACTTTATTTAACAGATTGAAGGTAAGTGAATGAGCAGAAGTACATTCTATTATTGCCTATAGCTGTCCCTGTATCTGTAAAATGAAGGGTTAAATGTAATAAATCCGCCCTAAGCAAAGGAGTAACTAAAGAAGTTGTAGGGTTGTTTACAACATTGATTTTATTCATTTCATATTCCTTCATAAGATGCATTGTTTAAATCAATTCTTTGTTATAAAAGAATGCATTGATCAATATACGAGAGTCTATTGCTAATTGCCTTTTGAATATACTCTCTACATGGGGCCTTATTCGTGTGACAGCACCTCTCTCTCTACAGTTTTATTAAATTATGATGTAATACGTTAAAGAAATGGTTGGATGCTTCATGATTGTATAGGTTGTCTCATATAATTGGAACTTGTATTTTAGAGGAATGAAATGAACAAAGATGATTTTATCCGGCTCATGCGGGGCGTTGTGGGCGATCAGATGCTCAGATTAGCAGTTTGTCAAGTACAATCACAGGTCAGCACTTAAGTTCTTTAGTCTTAAAGATTATGCTAAGAAGTATTTTCACTAAGAATTTTGTAAATAGATGAAATATCCATTGCAAACAAGGAAAATAAAAATACAGCAAATAACACAATACATACAATAAAATATAACATAGTAAATACAATGAAGATATTTTCAAAAAAAAAAAAAAAAAAAAGGAAATAATCAACAGATTGTCATGAAAATTTATTATGTTTTTATTTGTCACTTCAAAACATGTCTGTCCGTGAGTTACTGTACCTTCTTCAGGTTCCACCTTTAATCATTTTCATTTACAGCCTCCTCCTTCAGTAAGGCAACTTTCTCCTAGAATGCCATCTATGGGTCCTGGGACACCAATTTCTCTGATCCCCGACCATTTACACAACTTCATCCGAAAGGCATGAATCCTCCTGCAGTTCAATCATACATCCCCTCTCCAGCATCCCAAGGGCGGAGTAGTTCAGGCTATCCTGCCATGGAAAAGAATATGCAATCTTTACGAGAAGTAGAACAGCGACCTGATGGTAATGGAAATCAAATAACTTCATCCAGTACAAGCACCATCCAAGATAGGGAACGCTCCTCAGTTTCTGTTCCTGGACTTGAGAAGCAGCAGTTACACTTTCAACAGAAATCTTTTCCCATGTATGGAAACAGTGGTAATTATCACACATATACCGGTTCAAACATAAATGCCTCTTCATTGTCTCTTAAACCCCAACCTCATGAGGGTCAAGTGAAGCAGATTTCGCAGCAGGCTTCCAATTTTGACAGGCAAGTTACAATTAATGATTCCAAGCGAGTCCAGGGTGGAAGTGTTCCACACTTACATAATAACTTAACTTCACAGCAAAATCCATGGAAATCATCAACAAGTAAAGAGCAGAACATAATGAGTTACGTTAAACAAGAACCTTCTGATCAGGTTTCTGAGCAGAACAAAACCCAACATTCAAATTTGCAGGGCTTGTCTTCTATTCCTAGCATGCAGGCTGAACATGTTAACACAACCCCTGGGATAGCAAAGGACCCTTTTGACAAACAAACTTCTAAAATGGGTTTTCCTACATCAAACAACGTTGTGCCTCCAACATCAACCAATGCCGCAAATTCAATTTCTTCTGATTCAAGTTCTCAACAAGAGACCAATGCTGTGGTGAGTGTTAGTAGATATTAAAAAAAATGTGACTGCATTTGTGCAATAATCTTATGCCTTTCTAACTCTCCTCCCTTATAGCTCATTCTGATTGTTATAACTTAAGAGCTATTCATTTTTTTTTTCTTTATAGAAGATAAAATAGTTTATTTTTCACCTGGTTCATCGATTTGTGCATTATATTCTGAAGTCTATTACAATGAATTGTGTAGGTATATCTTTGTGAAGAATGTGCATTGCTCAATTTTATGGTGTTGGCGTGCTCTTAGGATGTATCATTTATCCTTTTTTTTTTTAATTTACAGTTGAACTCTCAGGTTCCTTCTGCTACTACTCCTGGAATGCAAAATAGGGCACCACAAAAAAAGGCAGCCGTGGGCCAAAAGAAGCCTCTTGAAGCCCTTGGCTCTTCCCCACCCCTATCAAGGTGAACATAAAACCTGGAGTTAAGTTTATTTTGGAAGATTTAAGGACAAATGGGTCATTGTTCACAATTGACCGTGTTCCTTTCAAATATAATTGACTTATACCTTACAGTAAGAAGCAAAAAGTATCTGGAGCATTTGCGGATCAAAGCATTGAACAACTTAATGATGTCACTGCAGTCAGTGGAGTTAATATTCGGGTACAATTCTCATATTTCCTGAATGGTTAAATCTAGTTGGTTCTAATTTGATTCCACAATAGATAAGTTTATGGTTTTGACCAGGAAGAAGAAGAGCAACTATTTTCTAGTGCAAAGGAGGATAGTCGAGCTTCTGAAGCATCACGGAGGGTTGTACAAGAAGAAGAAGAGAGGCTTCTATTGCAGAAAGCCCCATTGCAGAAGAAGCTCGTGGAAATCAGTTAGTGTTCAATTCTTTAACTAATATTTCAGTTGTTCTGTTTATGCAAATAGTATTGTGTGTTAAGTGAGCAGAATGACCGTCATTATTCTGTGACTGATTAAATGTTAATTGGCCTGTTTGTATGTGGCAGTGGCCAAATGTGGTTTGAAGGGCATGAGCAATGACGTTGAGAAATGTCTCTCATTGGTAAGGTGCCAGTCACTTTGGTAAATTTTTAGTGATGCATTAACAACCTTATAGACAGTAACTGCATCTTCAGTGTGTGGAGGAAAGATTACGAGGGGTTATTAGTAATCTAATCAGGCTGTCAAAGCAGGTCAGTGTATTTCCTTCCACTTCTAACTCTAGTTTTCTTCTATTCCACATTTCTGTACTATATTATTATTGTATGTTCATACATTTGATTGATCTCTGCAGCGAGTGGATGCGGAAAAACCAAGGCACCGAACTGTTATTACTTCAGATGTTCGGCAACAAATTACGTTAGTTAACCAAAAGGCCAGAGAAGAATGGGAGAAGAAACAGGCAGAAGAAGAAAAACTCAGAAAGCTTAATGATGTGAGGATTTATTTGGTTTTCTCTGCTTATGGTCGAACCAGGACTGTGTACAATAATGAAAAACTTTGTATAAATATCTTAAATAGGAAAAGGTTTAGTACATTTGACGGCTGGTCCTGCTCTTCTACTTGTTTGACATAGGTTCTTGATCTCTATATTTATTTTCTCATAGGATTTCTCAATCTTCTTATTGACTGTTTTTCTCCTGAAAAAAGGTTAAGATACAAATTTGGTCCCAATGGTTTGGAAAATGTTAGAATTTAGTCTTTATGGTTTAAAATTATAATTTCTTATGGTTTGATAAAACCTAAAAAATAGACTATGATTTATTAAAACCTCATAACTTGTGGGTTTTATCGGACCATAGAGACTAAACTCTAACTTTATTCAAATCAACCAAATTTGCAATTTAACAAAAAAAAAAAAGATCTTTTCTAAATGAAGCTCGTATTGATCAAATATTTATGAGACGTGGTATGAAAAAATATTATACAATAACTGTACAATGAATAATTTCCACAAGTGTGGGTGAGAAGTTTTCTTTTCCTTCCCCTTTTCCCATGTTTCTTTGTATTTTAACAGTCGCTTGGTTGTATACCTTTTCTTCTTGCAGCCTGAGGATGGTTCAGGTGTTGCTGGTGACAAGGATAAAGATGAAGGTCGAATGAAATCACTTAAGGTATTGAGAGTATCACATGATACTAAACATTGACATTTGGATCGATGAGTAATTCTTCATTGATTTGGTTTGATGTTTTTTGTGGTTTAGGTAAACAAAGAGGAGGATGATAAAATGCGGACAACAGCAGCAAATGTTGCTGCCCGTGCTGCTGTTGGAGGAGATGACATGCTATCAAAATGGCAGCTTATGGCTGAGCAGGCGCGACAGAAACGTGAAGGTGGAATGGATTCAGCTTCTAGTTCTCAGGCAGGGAAAGATGCTGTCCGTAAGTCTTCTTCAGCAGCAGGAAGACACGGGAAGGACAACCTAGAAGGTGAAAGAAAAGGTAGCAATACTCCATTTGGCATGTCTAATATGACAGCGGATGTTTGTCAAAATTAAACTTGACAATATTGCCATTTTCTCGAACATGCTTTGGACATCATAAAATGATAGTAATAAATAAAAGAAACACAGGAGGATGAAAAGAAAAAAGAGCACATTTATCATGTGGAAATCATAAACTGACAAGGAACCCAAGCTATTGCAAGTTTGTGTGAAATGCAATCGGAAATCTCATCAGCATCAATAGCTTAGTCATAACTTGTTTGAGATTATGATCCACTTATTTTTCTGTTAGATCACATTCATCAAATTAGAGAGATGGAAAAGGAAATTCAAATGTTGTAGGGTTAGGTGGATTGTCCCGCGAGATTAGTCGAGATGCATGAAAGCTAGCATGAATACTCTCAATTGATATAAAAAAATAATTAAAACGAAAGAAAAGTAAATGAAAATAAGCATGATTTTAACCCCATCTATCATGTTTTTGCACAGGAACTTCCAGGAAATTTGGAAGGAATCAAACTAATGCAACTCAAACTAAGGTGGCTCGTAGCATTTCTGTTAAAGATGTCATTGCTGTGCTGCAAAGGGAACCCCAGATGTCCAGATCGACCACGATATATCGTTTGTTTAACAGAGTTCATCCCGAAGCAACTGGTGAATAG

mRNA sequence

ATGGACCCATCTATTATGAAGCTTCTGGAGGATGACGAGGATGAATCAATGCATTCAGGTGCAGCTGTGGATGCTTTTCAGGCTGCCTTGAATAGAGACATAGAAGGCGACGCTCAGGCTGTTTCCCAGACTTCTGAATCTGATGCAGCCTTCCCTCAGGGGAATAACAATGGTTCTTCTACCCTCTCGTTACAAGCTTCTAGTCAAAGTGAAAATACTGAATCTCATGTGCAACAAAATCAAAATTTTCGTTTAAAGCAAGAACAACATTCATCTCTTATGGAGCTAGACCGATCAGTACCTGAAAATCAGCAGCAACACAGTTCTGCCCCCTTTCAAGTTTCAAAGAATCAACCCCAAGCAGATCGTGAGCAAGGGGAGGGAGAACAAGTTTCTGCTCAGTTTTCTCAAACAGCAGGGCTGCAAGTTTCTGAAAAAGCTCCAATCCTTGTGAATGACTCAAACAGAATGCAGAATCGGGACAATGAATCTCAATACTTGAAGTTACAAAAGATGAGTAATCAGCAGTCAATAGTTGCAGAACAGGCAAATAACCCTCTAAACCGTAGCAAACAGGTTCCTTTTGCCTCTTTGATGCCTGTATTGATGCCTCAGCTTGATAAAGACAGAGGCATGCAGCTTCAGACTTTATTTAACAGATTGAAGAGGAATGAAATGAACAAAGATGATTTTATCCGGCTCATGCGGGGCGTTGTGGGCGATCAGATGCTCAGATTAGCAGTTTGTCAAGTACAATCACAGAATGCCATCTATGGGTCCTGGGACACCAATTTCTCTGATCCCCGACCATTTACACAACTTCATCCGAAAGGCATGAATCCTCCTGCAGTTCAATCATACATCCCCTCTCCAGCATCCCAAGGGCGGAGTAGTTCAGGCTATCCTGCCATGGAAAAGAATATGCAATCTTTACGAGAAGTAGAACAGCGACCTGATGGTAATGGAAATCAAATAACTTCATCCAGTACAAGCACCATCCAAGATAGGGAACGCTCCTCAGTTTCTGTTCCTGGACTTGAGAAGCAGCAGTTACACTTTCAACAGAAATCTTTTCCCATGTATGGAAACAGTGGTAATTATCACACATATACCGGTTCAAACATAAATGCCTCTTCATTGTCTCTTAAACCCCAACCTCATGAGGGTCAAGTGAAGCAGATTTCGCAGCAGGCTTCCAATTTTGACAGGCAAGTTACAATTAATGATTCCAAGCGAGTCCAGGGTGGAAGTGTTCCACACTTACATAATAACTTAACTTCACAGCAAAATCCATGGAAATCATCAACAAGTAAAGAGCAGAACATAATGAGTTACGTTAAACAAGAACCTTCTGATCAGGTTTCTGAGCAGAACAAAACCCAACATTCAAATTTGCAGGGCTTGTCTTCTATTCCTAGCATGCAGGCTGAACATGTTAACACAACCCCTGGGATAGCAAAGGACCCTTTTGACAAACAAACTTCTAAAATGGGTTTTCCTACATCAAACAACGTTGTGCCTCCAACATCAACCAATGCCGCAAATTCAATTTCTTCTGATTCAAGTTCTCAACAAGAGACCAATGCTGTGTTGAACTCTCAGGTTCCTTCTGCTACTACTCCTGGAATGCAAAATAGGGCACCACAAAAAAAGGCAGCCGTGGGCCAAAAGAAGCCTCTTGAAGCCCTTGGCTCTTCCCCACCCCTATCAAGTAAGAAGCAAAAAGTATCTGGAGCATTTGCGGATCAAAGCATTGAACAACTTAATGATGTCACTGCAGTCAGTGGAGTTAATATTCGGGAAGAAGAAGAGCAACTATTTTCTAGTGCAAAGGAGGATAGTCGAGCTTCTGAAGCATCACGGAGGGTTGTACAAGAAGAAGAAGAGAGGCTTCTATTGCAGAAAGCCCCATTGCAGAAGAAGCTCGTGGAAATCATGGCCAAATGTGGTTTGAAGGGCATGAGCAATGACGTTGAGAAATGTCTCTCATTGTGTGTGGAGGAAAGATTACGAGGGGTTATTAGTAATCTAATCAGGCTGTCAAAGCAGCGAGTGGATGCGGAAAAACCAAGGCACCGAACTGTTATTACTTCAGATGTTCGGCAACAAATTACGTTAGTTAACCAAAAGGCCAGAGAAGAATGGGAGAAGAAACAGGCAGAAGAAGAAAAACTCAGAAAGCTTAATGATCCTGAGGATGGTTCAGGTGTTGCTGGTGACAAGGATAAAGATGAAGGTCGAATGAAATCACTTAAGGTAAACAAAGAGGAGGATGATAAAATGCGGACAACAGCAGCAAATGTTGCTGCCCGTGCTGCTGTTGGAGGAGATGACATGCTATCAAAATGGCAGCTTATGGCTGAGCAGGCGCGACAGAAACGTGAAGGTGGAATGGATTCAGCTTCTAGTTCTCAGGCAGGGAAAGATGCTGTCCGTAAGTCTTCTTCAGCAGCAGGAAGACACGGGAAGGACAACCTAGAAGGTGAAAGAAAAGGAACTTCCAGGAAATTTGGAAGGAATCAAACTAATGCAACTCAAACTAAGGTGGCTCGTAGCATTTCTGTTAAAGATGTCATTGCTGTGCTGCAAAGGGAACCCCAGATGTCCAGATCGACCACGATATATCGTTTGTTTAACAGAGTTCATCCCGAAGCAACTGGTGAATAG

Coding sequence (CDS)

ATGGACCCATCTATTATGAAGCTTCTGGAGGATGACGAGGATGAATCAATGCATTCAGGTGCAGCTGTGGATGCTTTTCAGGCTGCCTTGAATAGAGACATAGAAGGCGACGCTCAGGCTGTTTCCCAGACTTCTGAATCTGATGCAGCCTTCCCTCAGGGGAATAACAATGGTTCTTCTACCCTCTCGTTACAAGCTTCTAGTCAAAGTGAAAATACTGAATCTCATGTGCAACAAAATCAAAATTTTCGTTTAAAGCAAGAACAACATTCATCTCTTATGGAGCTAGACCGATCAGTACCTGAAAATCAGCAGCAACACAGTTCTGCCCCCTTTCAAGTTTCAAAGAATCAACCCCAAGCAGATCGTGAGCAAGGGGAGGGAGAACAAGTTTCTGCTCAGTTTTCTCAAACAGCAGGGCTGCAAGTTTCTGAAAAAGCTCCAATCCTTGTGAATGACTCAAACAGAATGCAGAATCGGGACAATGAATCTCAATACTTGAAGTTACAAAAGATGAGTAATCAGCAGTCAATAGTTGCAGAACAGGCAAATAACCCTCTAAACCGTAGCAAACAGGTTCCTTTTGCCTCTTTGATGCCTGTATTGATGCCTCAGCTTGATAAAGACAGAGGCATGCAGCTTCAGACTTTATTTAACAGATTGAAGAGGAATGAAATGAACAAAGATGATTTTATCCGGCTCATGCGGGGCGTTGTGGGCGATCAGATGCTCAGATTAGCAGTTTGTCAAGTACAATCACAGAATGCCATCTATGGGTCCTGGGACACCAATTTCTCTGATCCCCGACCATTTACACAACTTCATCCGAAAGGCATGAATCCTCCTGCAGTTCAATCATACATCCCCTCTCCAGCATCCCAAGGGCGGAGTAGTTCAGGCTATCCTGCCATGGAAAAGAATATGCAATCTTTACGAGAAGTAGAACAGCGACCTGATGGTAATGGAAATCAAATAACTTCATCCAGTACAAGCACCATCCAAGATAGGGAACGCTCCTCAGTTTCTGTTCCTGGACTTGAGAAGCAGCAGTTACACTTTCAACAGAAATCTTTTCCCATGTATGGAAACAGTGGTAATTATCACACATATACCGGTTCAAACATAAATGCCTCTTCATTGTCTCTTAAACCCCAACCTCATGAGGGTCAAGTGAAGCAGATTTCGCAGCAGGCTTCCAATTTTGACAGGCAAGTTACAATTAATGATTCCAAGCGAGTCCAGGGTGGAAGTGTTCCACACTTACATAATAACTTAACTTCACAGCAAAATCCATGGAAATCATCAACAAGTAAAGAGCAGAACATAATGAGTTACGTTAAACAAGAACCTTCTGATCAGGTTTCTGAGCAGAACAAAACCCAACATTCAAATTTGCAGGGCTTGTCTTCTATTCCTAGCATGCAGGCTGAACATGTTAACACAACCCCTGGGATAGCAAAGGACCCTTTTGACAAACAAACTTCTAAAATGGGTTTTCCTACATCAAACAACGTTGTGCCTCCAACATCAACCAATGCCGCAAATTCAATTTCTTCTGATTCAAGTTCTCAACAAGAGACCAATGCTGTGTTGAACTCTCAGGTTCCTTCTGCTACTACTCCTGGAATGCAAAATAGGGCACCACAAAAAAAGGCAGCCGTGGGCCAAAAGAAGCCTCTTGAAGCCCTTGGCTCTTCCCCACCCCTATCAAGTAAGAAGCAAAAAGTATCTGGAGCATTTGCGGATCAAAGCATTGAACAACTTAATGATGTCACTGCAGTCAGTGGAGTTAATATTCGGGAAGAAGAAGAGCAACTATTTTCTAGTGCAAAGGAGGATAGTCGAGCTTCTGAAGCATCACGGAGGGTTGTACAAGAAGAAGAAGAGAGGCTTCTATTGCAGAAAGCCCCATTGCAGAAGAAGCTCGTGGAAATCATGGCCAAATGTGGTTTGAAGGGCATGAGCAATGACGTTGAGAAATGTCTCTCATTGTGTGTGGAGGAAAGATTACGAGGGGTTATTAGTAATCTAATCAGGCTGTCAAAGCAGCGAGTGGATGCGGAAAAACCAAGGCACCGAACTGTTATTACTTCAGATGTTCGGCAACAAATTACGTTAGTTAACCAAAAGGCCAGAGAAGAATGGGAGAAGAAACAGGCAGAAGAAGAAAAACTCAGAAAGCTTAATGATCCTGAGGATGGTTCAGGTGTTGCTGGTGACAAGGATAAAGATGAAGGTCGAATGAAATCACTTAAGGTAAACAAAGAGGAGGATGATAAAATGCGGACAACAGCAGCAAATGTTGCTGCCCGTGCTGCTGTTGGAGGAGATGACATGCTATCAAAATGGCAGCTTATGGCTGAGCAGGCGCGACAGAAACGTGAAGGTGGAATGGATTCAGCTTCTAGTTCTCAGGCAGGGAAAGATGCTGTCCGTAAGTCTTCTTCAGCAGCAGGAAGACACGGGAAGGACAACCTAGAAGGTGAAAGAAAAGGAACTTCCAGGAAATTTGGAAGGAATCAAACTAATGCAACTCAAACTAAGGTGGCTCGTAGCATTTCTGTTAAAGATGTCATTGCTGTGCTGCAAAGGGAACCCCAGATGTCCAGATCGACCACGATATATCGTTTGTTTAACAGAGTTCATCCCGAAGCAACTGGTGAATAG

Protein sequence

MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDAQAVSQTSESDAAFPQGNNNGSSTLSLQASSQSENTESHVQQNQNFRLKQEQHSSLMELDRSVPENQQQHSSAPFQVSKNQPQADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQSIVAEQANNPLNRSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEMNKDDFIRLMRGVVGDQMLRLAVCQVQSQNAIYGSWDTNFSDPRPFTQLHPKGMNPPAVQSYIPSPASQGRSSSGYPAMEKNMQSLREVEQRPDGNGNQITSSSTSTIQDRERSSVSVPGLEKQQLHFQQKSFPMYGNSGNYHTYTGSNINASSLSLKPQPHEGQVKQISQQASNFDRQVTINDSKRVQGGSVPHLHNNLTSQQNPWKSSTSKEQNIMSYVKQEPSDQVSEQNKTQHSNLQGLSSIPSMQAEHVNTTPGIAKDPFDKQTSKMGFPTSNNVVPPTSTNAANSISSDSSSQQETNAVLNSQVPSATTPGMQNRAPQKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFADQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKLVEIMAKCGLKGMSNDVEKCLSLCVEERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQQITLVNQKAREEWEKKQAEEEKLRKLNDPEDGSGVAGDKDKDEGRMKSLKVNKEEDDKMRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGMDSASSSQAGKDAVRKSSSAAGRHGKDNLEGERKGTSRKFGRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRVHPEATGE

Homology

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BLAST of IVF0024579 vs. ExPASy Swiss-Prot
Match: F4K4L7 (Transcription initiation factor TFIID subunit 4b OS=Arabidopsis thaliana OX=3702 GN=TAF4B PE=1 SV=1)

HSP 1 Score: 597.8 bits (1540), Expect = 2.0e-169
Identity = 435/948 (45.89%), Postives = 565/948 (59.60%), Query Frame = 0


Query: 1   MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDAQAVSQTSESDAAFPQGNNNGSS 60
           MDPSI KLLE+DEDESMHSGA VDAFQAALNRDIEG     S T+        GNN+   
Sbjct: 1   MDPSIFKLLEEDEDESMHSGADVDAFQAALNRDIEG-----SMTTSIPHVTNPGNNH--- 60

Query: 61  TLSLQASSQSENTESHVQQNQNFRLKQEQHS----SLMELDRSVPENQQQH----SSAPF 120
                +S Q  +T  +   + N  + Q QHS     + E + S  ENQ QH    ++ P 
Sbjct: 61  -----SSRQQFSTWKNGIGDSNINV-QTQHSLESTQMKEQEGSTLENQHQHDLKRANEP- 120

Query: 121 QVSKNQPQADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKM 180
            +  NQPQ     G+  +  +Q  Q+ GL +SEK P   N+S+R  N+++ESQY+KLQKM
Sbjct: 121 HLQHNQPQDLHRAGQLWENPSQVPQSTGLPISEKNP-TGNESDRSHNQESESQYMKLQKM 180

Query: 181 SNQQSIVAEQANNPLN------RSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEM 240
           S+QQ+   E   NP+N        KQVPFA+L+P LM QLDKDR +QL+TL+ RLK+NE+
Sbjct: 181 SSQQARGVEPPVNPMNVNPINRNPKQVPFAALLPTLMNQLDKDRALQLRTLYARLKKNEI 240

Query: 241 NKDDFIRLMRGVVGDQMLRLAVCQVQSQNAIYGSWDTNFSDPRPFTQLHPKGMNPPAVQS 300
            K+ F R M+ +VGDQMLR+AV ++Q  N                               
Sbjct: 241 PKEGFTRHMKDIVGDQMLRMAVSKLQQVN------------------------------- 300

Query: 301 YIPSPASQGRSSSGYPAMEKNMQSLREVEQRPDGNGNQITSSSTSTIQDRERSSVSVPGL 360
                 +QG+     P+ E N Q  +   +    + NQ+ SS++ T+     SSV V GL
Sbjct: 301 -----YNQGKIGIQAPSTEINNQKSQSDPRAV--HLNQLPSSASGTL----GSSVPVQGL 360

Query: 361 EKQQLHFQQ---KSFPMYGNSGNYHTYTGSNINASSLSLKPQPHEGQVKQIS-------- 420
            K   H  Q    SFPMY  SG++H++ G N NAS  +L+P  H+  ++ ++        
Sbjct: 361 TKHPQHQMQHPPSSFPMYTTSGSFHSFPGPNTNASGSTLRPHLHDSHMRHVAHNQPMGST 420

Query: 421 ------QQASN------FDRQVTINDSKRVQGGSVPHLHNNLTSQQNPWKSSTSKEQNIM 480
                 Q  +N      F+R  ++ND  RVQGG+  H  N+ +   N    S   + + +
Sbjct: 421 GLGGPPQSTTNMMTMPKFERPSSVNDPSRVQGGATSHFQNSSSLPLN----SAPGQGSSV 480

Query: 481 SYVKQEPSDQVSEQNKTQHSNLQGLSSIPSMQAEHVNTTPGIAKDPFDKQTSKMGFPTSN 540
           S+VKQE  DQ  E+N                     N     + +  +K++S+M   T N
Sbjct: 481 SHVKQESVDQSFEKN---------------------NAASMTSNEDLEKESSRMVLSTPN 540

Query: 541 NVVPPTSTNAANSISSDSSSQQETNAVLNSQVPSATTPGMQN-RAPQKKAAVGQKKPLEA 600
           N+ P      A+S+S   ++Q + +  +NS+ P  T+ G  N R P KK +VGQKKPLE 
Sbjct: 541 NMAP------ASSVSPSMTTQLDASTTMNSRGPLGTSQGGANARMPPKKPSVGQKKPLET 600

Query: 601 LGSSPPLSSKKQKVSGAFADQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRASEASRR 660
           LGSSPP  SKKQKV+G   DQSIEQLNDVTAVSGVN+REEEEQLFS AKED R SEASRR
Sbjct: 601 LGSSPPPPSKKQKVAGNSMDQSIEQLNDVTAVSGVNLREEEEQLFSGAKEDGRVSEASRR 660

Query: 661 VVQEEEERLLLQKAPLQKKLVEIMAKCGLKGMSNDVEKCLSLCVEERLRGVISNLIRLSK 720
           VV EEEERL+LQK PLQ+KL EIMAK GLK +SNDVE+CLSLCVEER+RG++S++IRLSK
Sbjct: 661 VVHEEEERLILQKNPLQRKLAEIMAKAGLKQISNDVERCLSLCVEERMRGLLSHIIRLSK 720

Query: 721 QRVDAEKPRHRTVITSDVRQQITLVNQKAREEWEKKQAEEEKLRKLNDPEDG-SGVAGDK 780
           QRVDAEK RHRT ITSD+R QI  +NQK +EEWEKKQAE EKL+K ++ E+G  GV  +K
Sbjct: 721 QRVDAEKSRHRTFITSDIRLQINEMNQKVKEEWEKKQAEAEKLKKPSESEEGDGGVDSEK 780

Query: 781 DKDEGRMKSLKVNKEEDDKMRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGMDSA 840
           DK++ R K +K NKE+DDKMRTTAANVAARAAVGGDD   KWQLMAE ARQK        
Sbjct: 781 DKEDNRSKGVKGNKEDDDKMRTTAANVAARAAVGGDDAFLKWQLMAE-ARQK-------- 840

Query: 841 SSSQAGKDAVRKSSSAAGRHGKDNLEGERK--GT-------------------------- 878
           S S+AGKD  +K++S  G++ KD  +G R+  GT                          
Sbjct: 841 SVSEAGKDGNQKTTSGGGKNSKDRQDGGRRFSGTESSCGVGIVYRVSSSRFWFAMMSFGF 850

[Close]

BLAST of IVF0024579 vs. ExPASy Swiss-Prot
Match: Q6SJR1 (Transcription initiation factor TFIID subunit 4 OS=Arabidopsis thaliana OX=3702 GN=TAF4 PE=1 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.4e-98
Identity = 288/764 (37.70%), Postives = 429/764 (56.15%), Query Frame = 0


Query: 151 VNDSNRMQNRDNESQYLKLQKMSNQQSIVAEQANNPLNRSKQVPFASLMPVLMPQLDKDR 210
           +N++   ++   + +Y+KLQKMS++++   E+  +P+N + ++  A +  +L   +D   
Sbjct: 43  INNTTGNESEKPQPRYMKLQKMSSKETPWVEKTVDPVNHNLRL--ARVTDLLRTVVDHQP 102

Query: 211 GMQLQ--TLFNRLKRNEMNKDDFIRLMRGVVGDQMLRLAVCQVQSQNAIYGSWDTNFSDP 270
           G +     L  +LKR E+  ++F+R +R +VGDQ++R  + Q+                 
Sbjct: 103 GKKTHCLNLHYKLKRKELTMEEFMRQLRDLVGDQIIRSVISQL----------------- 162

Query: 271 RPFTQLHPKGMNPPAVQSYIPSPASQGRSSSGYPAMEKNMQSLREVEQRPDGNGNQITSS 330
               QL P  M        I  P   GRS+  +  + K+ +   +     + + NQ++S+
Sbjct: 163 ---PQLKPGNMG-------IKVP---GRSN--HDKVSKSAEFTAQESDPREVHVNQLSST 222

Query: 331 STSTIQDRERSSVSVPGLEK---QQLHFQQKSFPMYGNSGNYHTYTGSNINASSLSLKPQ 390
           ++ T+     SS +V GL K   Q +     SF M   SG+ + Y G+N+ +   S + +
Sbjct: 223 TSGTL----NSSTTVQGLNKHPEQHMQLPSSSFHMDTKSGSLNPYPGTNVTSPGSSSRAK 282

Query: 391 PHEGQVKQISQQAS------------------NFDRQVTINDSKRVQGGSVPHLHNN--L 450
             + Q ++ +Q                      F+R   +N   RVQ G +     N   
Sbjct: 283 LPDFQHRENNQNVGIASVGGPTKSTINMTTVPKFERPTFVNGPSRVQDGPISDFPKNSSF 342

Query: 451 TSQQNPWKSSTSKEQNI-----MSYVKQEPSDQVSEQ-NKTQHSNLQGLSSIPSMQAEHV 510
                PW+ S +K+  +     + +V+ +  DQ  EQ +K ++   QG++++P  Q    
Sbjct: 343 PLYSAPWQGSVTKDHTVGPSSSVIHVEHKLIDQSFEQAHKPRYLVQQGVTNVPLKQK--- 402

Query: 511 NTTPGIAKDPFDKQTSKMGFPTSNNVVPPTSTNAANSISSDSSSQQETNAVLNSQVPSAT 570
           N  P  + D  +KQ+SKMG          TST +A+S+    ++Q +++ ++N   PS T
Sbjct: 403 NAIPISSNDDLEKQSSKMGL--------FTSTTSASSVFPSMTTQLDSSTMVNMPAPSET 462

Query: 571 TPGMQN-RAPQKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFADQSIEQLNDVTAVSGVN 630
            P + N     K  +VGQKKPLEALGSS P S KKQK+ G  +D+SIE+ NDVTAVSG+N
Sbjct: 463 IPKIANVTVTPKMPSVGQKKPLEALGSSLPPSRKKQKICGTSSDESIEKFNDVTAVSGIN 522

Query: 631 IREEEEQLFSSA-KEDSRASEASRRVVQEEEERLLLQKAPLQKKLVEIMAKCGLKGMSND 690
           +REEE+QL  S  K++ R S+A RR+V  EEER LLQK PLQ+KL EIM K GLK + +D
Sbjct: 523 LREEEKQLLDSGPKKNDRVSKAYRRLVHGEEERTLLQKIPLQRKLTEIMGKSGLKHIDHD 582

Query: 691 VEKCLSLCVEERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQQITLVNQKAREEWEK 750
           VE+CLSLCVEER+RG++ N+IR+SKQR DAEK R+RT ITSD+R++I  +NQK +EEWEK
Sbjct: 583 VERCLSLCVEERMRGLLFNIIRISKQRTDAEKCRNRTFITSDIRKEINEMNQKVKEEWEK 642

Query: 751 KQAEEEKLRKLNDPEDGSGVAGDKDKDEGRMKSLKVNKEEDDKMRTTAANVAARAAVGGD 810
           K + EEK ++            D +K++ R   +K NK+++DK R  AANVA RAAVGGD
Sbjct: 643 KHSGEEKNKE-----------NDTEKEDQRSNEVKANKKDEDKERAKAANVAVRAAVGGD 702

Query: 811 DMLSKWQLMAEQARQKREGGMDSASSSQAGKDAVRKSSSAAGRHGKDNLEGERKGTSRKF 870
           D  SKW+LMAE ARQ                    +SS   GR+ K  L G   GT  +F
Sbjct: 703 DRFSKWKLMAE-ARQ--------------------RSSPGPGRNSK-KLSG---GT--QF 716

Query: 871 GRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRV 882
           G+NQ      KV RSISVKDVIAV+++EPQMSRST +YR++NR+
Sbjct: 763 GKNQ---GLPKVVRSISVKDVIAVVEKEPQMSRSTLLYRVYNRI 716

[Close]

BLAST of IVF0024579 vs. ExPASy Swiss-Prot
Match: O00268 (Transcription initiation factor TFIID subunit 4 OS=Homo sapiens OX=9606 GN=TAF4 PE=1 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 1.8e-05
Identity = 80/332 (24.10%), Postives = 153/332 (46.08%), Query Frame = 0


Query: 550  KKAAVGQKKPLEALGSSPPLSSK---KQKVSGAFADQSIEQLNDVTAVSGVNIREEEEQL 609
            K A +   K L A+ +    + K   K+   G+F D   + +NDV +++GVN+ EE  ++
Sbjct: 795  KPAVLPGTKALSAVSAQAAAAQKNKLKEPGGGSFRDD--DDINDVASMAGVNLSEESARI 854

Query: 610  FSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKLVEIMAKCGLKGMSNDVEKCLSLCV 669
             ++       SE    + +  ++   L +APLQ++++EI  K G+  +  DV   +S   
Sbjct: 855  LAT------NSELVGTLTRSCKDETFLLQAPLQRRILEIGKKHGITELHPDVVSYVSHAT 914

Query: 670  EERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQQITLVNQKAREEWEKKQAEEEKLR 729
            ++RL+ ++  +   ++Q+  + K   R    SDVR Q+    Q   ++ EK++ +E++  
Sbjct: 915  QQRLQNLVEKISETAQQKNFSYKDDDRYEQASDVRAQLKFFEQ--LDQIEKQRKDEQERE 974

Query: 730  KLNDPEDGSGVAGDKDKDEGRMKSLKVNKEEDDKMRTTAANVAARAAVGGDDMLSKWQLM 789
             L           D ++   + K+ ++ ++E  +MR   AN+ A AA+G           
Sbjct: 975  ILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQRDANLTALAAIG----------- 1034

Query: 790  AEQARQKREGGMDSASSSQAGKDAVRKSSSAAGRHGKDNLEGERKGTSRKFGRNQTNATQ 849
                R+KR+       S   G +     S   G  G         GT R+F       T+
Sbjct: 1035 ---PRKKRKVDCPGPGS---GAEGSGPGSVVPGSSG--------VGTPRQF-------TR 1083

Query: 850  TKVARSISVKDVIAVLQREPQMSRSTTIYRLF 879
             ++ R ++++D+I  L+ E + S S  +Y+ F
Sbjct: 1095 QRITR-VNLRDLIFCLENERETSHSLLLYKAF 1083

[Close]

BLAST of IVF0024579 vs. ExPASy TrEMBL
Match: A0A5A7T5I5 (Transcription initiation factor TFIID subunit 4b OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G00770 PE=3 SV=1)

HSP 1 Score: 1612.4 bits (4174), Expect = 0.0e+00
Identity = 880/899 (97.89%), Postives = 880/899 (97.89%), Query Frame = 0


Query: 1   MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDAQAVSQTSESDAAFPQGNNNGSS 60
           MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDAQAVSQTSESDAAFPQGNNNGSS
Sbjct: 1   MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDAQAVSQTSESDAAFPQGNNNGSS 60

Query: 61  TLSLQASSQSENTESHVQQNQNFRLKQEQHSSLMELDRSVPENQQQHSSAPFQVSKNQPQ 120
           TLSLQASSQSENTESHVQQNQNFRLKQEQHSSLMELDRSVPENQQQHSSAPFQVSKNQPQ
Sbjct: 61  TLSLQASSQSENTESHVQQNQNFRLKQEQHSSLMELDRSVPENQQQHSSAPFQVSKNQPQ 120

Query: 121 ADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQSIVA 180
           ADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQSIVA
Sbjct: 121 ADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQSIVA 180

Query: 181 EQANNPLNRSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEMNKDDFIRLMRGVVG 240
           EQANNPLNRSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEMNKDDFIRLMRGVVG
Sbjct: 181 EQANNPLNRSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEMNKDDFIRLMRGVVG 240

Query: 241 DQMLRLAVCQVQSQ-----------NAIYGSWDTNFSDPRPFTQLHPKGMNPPAVQSYIP 300
           DQMLRLAVCQVQSQ               G    NFSDPRPFTQLHPKGMNPPAVQSYIP
Sbjct: 241 DQMLRLAVCQVQSQPPPSVRQLSPRMPSMGPGTPNFSDPRPFTQLHPKGMNPPAVQSYIP 300

Query: 301 SPASQGRSSSGYPAMEKNMQSLREVEQRPDGNGNQITSSSTSTIQDRERSSVSVPGLEKQ 360
           SPASQGRSSSGYPAMEKNMQSLREVEQRPDGNGNQITSSSTSTIQDRERSSVSVPGLEKQ
Sbjct: 301 SPASQGRSSSGYPAMEKNMQSLREVEQRPDGNGNQITSSSTSTIQDRERSSVSVPGLEKQ 360

Query: 361 QLHFQQKSFPMYGNSGNYHTYTGSNINASSLSLKPQPHEGQVKQISQQASNFDRQVTIND 420
           QLHFQQKSFPMYGNSGNYHTYTGSNINASSLSLKPQPHEGQVKQISQQASNFDRQVTIND
Sbjct: 361 QLHFQQKSFPMYGNSGNYHTYTGSNINASSLSLKPQPHEGQVKQISQQASNFDRQVTIND 420

Query: 421 SKRVQGGSVPHLHNNLTSQQNPWKSSTSKEQNIMSYVKQEPSDQVSEQNKTQHSNLQGLS 480
           SKRVQGGSVPHLHNNLTSQQNPWKSSTSKEQNIMSYVKQEPSDQVSEQNKTQHSNLQGLS
Sbjct: 421 SKRVQGGSVPHLHNNLTSQQNPWKSSTSKEQNIMSYVKQEPSDQVSEQNKTQHSNLQGLS 480

Query: 481 SIPSMQAEHVNTTPGIAKDPFDKQTSKMGFPTSNNVVPPTSTNAANSISSDSSSQQETNA 540
           SIPSMQAEHVNTTPGIAKDPFDKQTSKMGFPTSNNVVPPTSTNAANSISSDSSSQQETNA
Sbjct: 481 SIPSMQAEHVNTTPGIAKDPFDKQTSKMGFPTSNNVVPPTSTNAANSISSDSSSQQETNA 540

Query: 541 VLNSQVPSATTPGMQNRAPQKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFADQSIEQLN 600
           VLNSQVPSATTPGMQNRAPQKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFADQSIEQLN
Sbjct: 541 VLNSQVPSATTPGMQNRAPQKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFADQSIEQLN 600

Query: 601 DVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKLVEIMAKC 660
           DVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKLVEIMAKC
Sbjct: 601 DVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKLVEIMAKC 660

Query: 661 GLKGMSNDVEKCLSLCVEERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQQITLVNQ 720
           GLKGMSNDVEKCLSLCVEERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQQITLVNQ
Sbjct: 661 GLKGMSNDVEKCLSLCVEERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQQITLVNQ 720

Query: 721 KAREEWEKKQAEEEKLRKLNDPEDGSGVAGDKDKDEGRMKSLKVNKEEDDKMRTTAANVA 780
           KAREEWEKKQAEEEKLRKLNDPEDGSGVAGDKDKDEGRMKSLKVNKEEDDKMRTTAANVA
Sbjct: 721 KAREEWEKKQAEEEKLRKLNDPEDGSGVAGDKDKDEGRMKSLKVNKEEDDKMRTTAANVA 780

Query: 781 ARAAVGGDDMLSKWQLMAEQARQKREGGMDSASSSQAGKDAVRKSSSAAGRHGKDNLEGE 840
           ARAAVGGDDMLSKWQLMAEQARQKREGGMDSASSSQAGKDAVRKSSSAAGRHGKDNLEGE
Sbjct: 781 ARAAVGGDDMLSKWQLMAEQARQKREGGMDSASSSQAGKDAVRKSSSAAGRHGKDNLEGE 840

Query: 841 RKGTSRKFGRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRVHPEATGE 889
           RKGTSRKFGRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRVHPEATGE
Sbjct: 841 RKGTSRKFGRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRVHPEATGE 899

[Close]

BLAST of IVF0024579 vs. ExPASy TrEMBL
Match: A0A1S3CQ23 (transcription initiation factor TFIID subunit 4b OS=Cucumis melo OX=3656 GN=LOC103503522 PE=3 SV=1)

HSP 1 Score: 1612.4 bits (4174), Expect = 0.0e+00
Identity = 880/899 (97.89%), Postives = 880/899 (97.89%), Query Frame = 0


Query: 1   MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDAQAVSQTSESDAAFPQGNNNGSS 60
           MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDAQAVSQTSESDAAFPQGNNNGSS
Sbjct: 1   MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDAQAVSQTSESDAAFPQGNNNGSS 60

Query: 61  TLSLQASSQSENTESHVQQNQNFRLKQEQHSSLMELDRSVPENQQQHSSAPFQVSKNQPQ 120
           TLSLQASSQSENTESHVQQNQNFRLKQEQHSSLMELDRSVPENQQQHSSAPFQVSKNQPQ
Sbjct: 61  TLSLQASSQSENTESHVQQNQNFRLKQEQHSSLMELDRSVPENQQQHSSAPFQVSKNQPQ 120

Query: 121 ADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQSIVA 180
           ADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQSIVA
Sbjct: 121 ADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQSIVA 180

Query: 181 EQANNPLNRSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEMNKDDFIRLMRGVVG 240
           EQANNPLNRSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEMNKDDFIRLMRGVVG
Sbjct: 181 EQANNPLNRSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEMNKDDFIRLMRGVVG 240

Query: 241 DQMLRLAVCQVQSQ-----------NAIYGSWDTNFSDPRPFTQLHPKGMNPPAVQSYIP 300
           DQMLRLAVCQVQSQ               G    NFSDPRPFTQLHPKGMNPPAVQSYIP
Sbjct: 241 DQMLRLAVCQVQSQPPPSVRQLSPRMPSMGPGTPNFSDPRPFTQLHPKGMNPPAVQSYIP 300

Query: 301 SPASQGRSSSGYPAMEKNMQSLREVEQRPDGNGNQITSSSTSTIQDRERSSVSVPGLEKQ 360
           SPASQGRSSSGYPAMEKNMQSLREVEQRPDGNGNQITSSSTSTIQDRERSSVSVPGLEKQ
Sbjct: 301 SPASQGRSSSGYPAMEKNMQSLREVEQRPDGNGNQITSSSTSTIQDRERSSVSVPGLEKQ 360

Query: 361 QLHFQQKSFPMYGNSGNYHTYTGSNINASSLSLKPQPHEGQVKQISQQASNFDRQVTIND 420
           QLHFQQKSFPMYGNSGNYHTYTGSNINASSLSLKPQPHEGQVKQISQQASNFDRQVTIND
Sbjct: 361 QLHFQQKSFPMYGNSGNYHTYTGSNINASSLSLKPQPHEGQVKQISQQASNFDRQVTIND 420

Query: 421 SKRVQGGSVPHLHNNLTSQQNPWKSSTSKEQNIMSYVKQEPSDQVSEQNKTQHSNLQGLS 480
           SKRVQGGSVPHLHNNLTSQQNPWKSSTSKEQNIMSYVKQEPSDQVSEQNKTQHSNLQGLS
Sbjct: 421 SKRVQGGSVPHLHNNLTSQQNPWKSSTSKEQNIMSYVKQEPSDQVSEQNKTQHSNLQGLS 480

Query: 481 SIPSMQAEHVNTTPGIAKDPFDKQTSKMGFPTSNNVVPPTSTNAANSISSDSSSQQETNA 540
           SIPSMQAEHVNTTPGIAKDPFDKQTSKMGFPTSNNVVPPTSTNAANSISSDSSSQQETNA
Sbjct: 481 SIPSMQAEHVNTTPGIAKDPFDKQTSKMGFPTSNNVVPPTSTNAANSISSDSSSQQETNA 540

Query: 541 VLNSQVPSATTPGMQNRAPQKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFADQSIEQLN 600
           VLNSQVPSATTPGMQNRAPQKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFADQSIEQLN
Sbjct: 541 VLNSQVPSATTPGMQNRAPQKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFADQSIEQLN 600

Query: 601 DVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKLVEIMAKC 660
           DVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKLVEIMAKC
Sbjct: 601 DVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKLVEIMAKC 660

Query: 661 GLKGMSNDVEKCLSLCVEERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQQITLVNQ 720
           GLKGMSNDVEKCLSLCVEERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQQITLVNQ
Sbjct: 661 GLKGMSNDVEKCLSLCVEERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQQITLVNQ 720

Query: 721 KAREEWEKKQAEEEKLRKLNDPEDGSGVAGDKDKDEGRMKSLKVNKEEDDKMRTTAANVA 780
           KAREEWEKKQAEEEKLRKLNDPEDGSGVAGDKDKDEGRMKSLKVNKEEDDKMRTTAANVA
Sbjct: 721 KAREEWEKKQAEEEKLRKLNDPEDGSGVAGDKDKDEGRMKSLKVNKEEDDKMRTTAANVA 780

Query: 781 ARAAVGGDDMLSKWQLMAEQARQKREGGMDSASSSQAGKDAVRKSSSAAGRHGKDNLEGE 840
           ARAAVGGDDMLSKWQLMAEQARQKREGGMDSASSSQAGKDAVRKSSSAAGRHGKDNLEGE
Sbjct: 781 ARAAVGGDDMLSKWQLMAEQARQKREGGMDSASSSQAGKDAVRKSSSAAGRHGKDNLEGE 840

Query: 841 RKGTSRKFGRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRVHPEATGE 889
           RKGTSRKFGRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRVHPEATGE
Sbjct: 841 RKGTSRKFGRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRVHPEATGE 899

[Close]

BLAST of IVF0024579 vs. ExPASy TrEMBL
Match: A0A5D3E681 (Transcription initiation factor TFIID subunit 4b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004260 PE=3 SV=1)

HSP 1 Score: 1599.7 bits (4141), Expect = 0.0e+00
Identity = 876/899 (97.44%), Postives = 876/899 (97.44%), Query Frame = 0


Query: 1   MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDAQAVSQTSESDAAFPQGNNNGSS 60
           MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDAQAVSQTSESDAAFPQGNNNGSS
Sbjct: 1   MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDAQAVSQTSESDAAFPQGNNNGSS 60

Query: 61  TLSLQASSQSENTESHVQQNQNFRLKQEQHSSLMELDRSVPENQQQHSSAPFQVSKNQPQ 120
           TLSLQASSQSENTESHVQQNQNFRLKQEQHSSLMELDRSVPENQQQHSSAPFQVSKNQPQ
Sbjct: 61  TLSLQASSQSENTESHVQQNQNFRLKQEQHSSLMELDRSVPENQQQHSSAPFQVSKNQPQ 120

Query: 121 ADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQSIVA 180
           ADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQSIVA
Sbjct: 121 ADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQSIVA 180

Query: 181 EQANNPLNRSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEMNKDDFIRLMRGVVG 240
           EQANNPLNRSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEMNKDDFIRLMRGVVG
Sbjct: 181 EQANNPLNRSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEMNKDDFIRLMRGVVG 240

Query: 241 DQMLRLAVCQVQSQ-----------NAIYGSWDTNFSDPRPFTQLHPKGMNPPAVQSYIP 300
           DQMLRLAVCQVQSQ               G    NFSDPRPFTQLHPKGMNPPAVQSYIP
Sbjct: 241 DQMLRLAVCQVQSQPPPSVRQLSPRMPSMGPGTPNFSDPRPFTQLHPKGMNPPAVQSYIP 300

Query: 301 SPASQGRSSSGYPAMEKNMQSLREVEQRPDGNGNQITSSSTSTIQDRERSSVSVPGLEKQ 360
           SPASQGRSSSGYPAMEKNMQSLREVEQRPDGNGNQITSSSTSTIQDRERSSVSVPGLEKQ
Sbjct: 301 SPASQGRSSSGYPAMEKNMQSLREVEQRPDGNGNQITSSSTSTIQDRERSSVSVPGLEKQ 360

Query: 361 QLHFQQKSFPMYGNSGNYHTYTGSNINASSLSLKPQPHEGQVKQISQQASNFDRQVTIND 420
           QLHFQQKSFPMYGNSGNYHTYTGSNINASSLSLKPQPHEGQVKQISQQASNFDRQVTIND
Sbjct: 361 QLHFQQKSFPMYGNSGNYHTYTGSNINASSLSLKPQPHEGQVKQISQQASNFDRQVTIND 420

Query: 421 SKRVQGGSVPHLHNNLTSQQNPWKSSTSKEQNIMSYVKQEPSDQVSEQNKTQHSNLQGLS 480
           SKRVQGGSVPHLHNNLTSQQNPWKSSTSKEQNIMSYVKQEPSDQVSEQNKTQHSNLQGLS
Sbjct: 421 SKRVQGGSVPHLHNNLTSQQNPWKSSTSKEQNIMSYVKQEPSDQVSEQNKTQHSNLQGLS 480

Query: 481 SIPSMQAEHVNTTPGIAKDPFDKQTSKMGFPTSNNVVPPTSTNAANSISSDSSSQQETNA 540
           SIPSMQAEHVNTTPGIAKDPFDKQTSKMGFPTSNNVVPPTSTNAANSISSDSSSQQETNA
Sbjct: 481 SIPSMQAEHVNTTPGIAKDPFDKQTSKMGFPTSNNVVPPTSTNAANSISSDSSSQQETNA 540

Query: 541 VLNSQVPSATTPGMQNRAPQKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFADQSIEQLN 600
           VLNSQVPSATTPGMQNRAPQKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFADQSIEQLN
Sbjct: 541 VLNSQVPSATTPGMQNRAPQKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFADQSIEQLN 600

Query: 601 DVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKLVEIMAKC 660
           DVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKLVEIMAKC
Sbjct: 601 DVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKLVEIMAKC 660

Query: 661 GLKGMSNDVEKCLSLCVEERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQQITLVNQ 720
           GLKGMSNDVEKCLSLCVEERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQQITLVNQ
Sbjct: 661 GLKGMSNDVEKCLSLCVEERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQQITLVNQ 720

Query: 721 KAREEWEKKQAEEEKLRKLNDPEDGSGVAGDKDKDEGRMKSLKVNKEEDDKMRTTAANVA 780
           KAREEWEKKQAEEEKLRKLNDPEDGSGVAGDKDKDEGRMKSLKVNKEEDDKMRTTAANVA
Sbjct: 721 KAREEWEKKQAEEEKLRKLNDPEDGSGVAGDKDKDEGRMKSLKVNKEEDDKMRTTAANVA 780

Query: 781 ARAAVGGDDMLSKWQLMAEQARQKREGGMDSASSSQAGKDAVRKSSSAAGRHGKDNLEGE 840
           ARAAVGGDDMLSKWQLMAEQARQKREGGMDSASSSQAGKDAVRKSSSAAGRHGKDNLE  
Sbjct: 781 ARAAVGGDDMLSKWQLMAEQARQKREGGMDSASSSQAGKDAVRKSSSAAGRHGKDNLE-- 840

Query: 841 RKGTSRKFGRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRVHPEATGE 889
             GTSRKFGRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRVHPEATGE
Sbjct: 841 --GTSRKFGRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRVHPEATGE 895

[Close]

BLAST of IVF0024579 vs. ExPASy TrEMBL
Match: A0A0A0LF46 (RST domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G903480 PE=3 SV=1)

HSP 1 Score: 1541.9 bits (3991), Expect = 0.0e+00
Identity = 844/899 (93.88%), Postives = 861/899 (95.77%), Query Frame = 0


Query: 1   MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDAQAVSQTSESDAAFPQGNNNGSS 60
           MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGD QAV+QTSESDAAFPQGNNNGSS
Sbjct: 1   MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDVQAVAQTSESDAAFPQGNNNGSS 60

Query: 61  TLSLQASSQSENTESHVQQNQNFRLKQEQHSSLMELDRSVPENQQQHSSAPFQVSKNQPQ 120
           TLSLQASSQSEN+E+HVQQNQNFRLKQEQHSSLMEL+RSVPENQQQH+SAPFQVSKNQPQ
Sbjct: 61  TLSLQASSQSENSETHVQQNQNFRLKQEQHSSLMELERSVPENQQQHNSAPFQVSKNQPQ 120

Query: 121 ADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQSIVA 180
           ADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQS+VA
Sbjct: 121 ADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQSMVA 180

Query: 181 EQANNPLNRSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEMNKDDFIRLMRGVVG 240
           EQANNPLNRSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEMNKDDFIRLMRGVVG
Sbjct: 181 EQANNPLNRSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEMNKDDFIRLMRGVVG 240

Query: 241 DQMLRLAVCQVQSQ-----------NAIYGSWDTNFSDPRPFTQLHPKGMNPPAVQSYIP 300
           DQMLRLAVCQVQSQ               G    NFSDPRPFTQLHPKGMNPPAVQSY+P
Sbjct: 241 DQMLRLAVCQVQSQPPPSVRQLPPRMPSMGPGTPNFSDPRPFTQLHPKGMNPPAVQSYMP 300

Query: 301 SPASQGRSSSGYPAMEKNMQSLREVEQRPDGNGNQITSSSTSTIQDRERSSVSVPGLEKQ 360
           SPASQGRSSSGYPAM+KNMQSLREVEQRPD NGNQITSSSTSTIQDRERSSVSVPGLEKQ
Sbjct: 301 SPASQGRSSSGYPAMDKNMQSLREVEQRPDCNGNQITSSSTSTIQDRERSSVSVPGLEKQ 360

Query: 361 QLHFQQKSFPMYGNSGNYHTYTGSNINASSLSLKPQPHEGQVKQISQQASNFDRQVTIND 420
           QLHFQQKSF MYGNSGNYH YTGSN+NASSLSLKPQPHEGQVKQISQQA NFDRQVTIND
Sbjct: 361 QLHFQQKSFNMYGNSGNYHPYTGSNMNASSLSLKPQPHEGQVKQISQQAPNFDRQVTIND 420

Query: 421 SKRVQGGSVPHLHNNLTSQQNPWKSSTSKEQNIMSYVKQEPSDQVSEQNKTQHSNLQGLS 480
           SKRVQ GSVPHLHNNLTSQQN WKSSTSKEQ I SYVKQEPSDQVSEQ+KTQHSNLQGLS
Sbjct: 421 SKRVQAGSVPHLHNNLTSQQNSWKSSTSKEQTITSYVKQEPSDQVSEQSKTQHSNLQGLS 480

Query: 481 SIPSMQAEHVNTTPGIAKDPFDKQTSKMGFPTSNNVVPPTSTNAANSISSDSSSQQETNA 540
           SIPSMQAE VNT PGIAKDPFDKQTSKMGFPT NNV+PPTSTNAANSISSDSSS  E+NA
Sbjct: 481 SIPSMQAEQVNTNPGIAKDPFDKQTSKMGFPTPNNVMPPTSTNAANSISSDSSSLHESNA 540

Query: 541 VLNSQVPSATTPGMQNRAPQKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFADQSIEQLN 600
                VPSATTPGMQNRAPQKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFADQSIEQLN
Sbjct: 541 A----VPSATTPGMQNRAPQKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFADQSIEQLN 600

Query: 601 DVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKLVEIMAKC 660
           DVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKLVEIMAKC
Sbjct: 601 DVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKLVEIMAKC 660

Query: 661 GLKGMSNDVEKCLSLCVEERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQQITLVNQ 720
           GLKGMSNDVEKCLSLCVEERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQQITLVNQ
Sbjct: 661 GLKGMSNDVEKCLSLCVEERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQQITLVNQ 720

Query: 721 KAREEWEKKQAEEEKLRKLNDPEDGSGVAGDKDKDEGRMKSLKVNKEEDDKMRTTAANVA 780
           KAREEWEKKQAEEEKLRKLNDP+DGSGV+GDK+KDEGRMKSLKVNKEEDDKMRTTAANVA
Sbjct: 721 KAREEWEKKQAEEEKLRKLNDPDDGSGVSGDKEKDEGRMKSLKVNKEEDDKMRTTAANVA 780

Query: 781 ARAAVGGDDMLSKWQLMAEQARQKREGGMDSASSSQAGKDAVRKSSSAAGRHGKDNLEGE 840
           ARAAVGGDDMLSKWQLMAEQARQKREGG+DSASSSQAGKDAVRKSSSAAGRHGKDNLEGE
Sbjct: 781 ARAAVGGDDMLSKWQLMAEQARQKREGGVDSASSSQAGKDAVRKSSSAAGRHGKDNLEGE 840

Query: 841 RKGTSRKFGRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRVHPEATGE 889
           RKGTSRKFGRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRVHPE+TGE
Sbjct: 841 RKGTSRKFGRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRVHPESTGE 895

[Close]

BLAST of IVF0024579 vs. ExPASy TrEMBL
Match: A0A6J1GJW9 (transcription initiation factor TFIID subunit 4b isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454994 PE=3 SV=1)

HSP 1 Score: 1412.1 bits (3654), Expect = 0.0e+00
Identity = 782/906 (86.31%), Postives = 828/906 (91.39%), Query Frame = 0


Query: 1   MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDAQAVSQTSESDAAFPQGNNNGSS 60
           MDPSIMKLLEDDEDE+MHSGAAV+AFQAALNRDIEGD  AVSQ  ESDAAFP+G +NG S
Sbjct: 1   MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRDIEGDVPAVSQAPESDAAFPRG-SNGPS 60

Query: 61  TLSLQASSQSENTESHVQQNQNFRLKQEQHSSLMELDR--SVPENQQQHSSAPFQVSKNQ 120
            LSLQA SQ+E TESH QQ+QNFR KQEQHSSLMEL+R  S+PENQQQH++AP Q SKNQ
Sbjct: 61  NLSLQA-SQNEKTESHAQQDQNFRPKQEQHSSLMELERCSSLPENQQQHNAAPLQASKNQ 120

Query: 121 PQADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQSI 180
           PQADREQG+ EQVSAQFSQTAGLQ SEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQ++
Sbjct: 121 PQADREQGDTEQVSAQFSQTAGLQGSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQTM 180

Query: 181 VAEQANNPLNRSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEMNKDDFIRLMRGV 240
           V+EQANNPLNRSKQVPFASLMPVLMPQLDKDR MQLQTLFNRLKRNEMNKDDFIRLMRGV
Sbjct: 181 VSEQANNPLNRSKQVPFASLMPVLMPQLDKDRAMQLQTLFNRLKRNEMNKDDFIRLMRGV 240

Query: 241 VGDQMLRLAVCQVQSQ-----------NAIYGSWDTNFSDPRPFTQLHPKGMNPPAVQSY 300
           VGDQMLRLAVCQVQ+Q               G    NFSDPRPF+QLH KGMN PAVQSY
Sbjct: 241 VGDQMLRLAVCQVQAQPPPSVRQLSPRMPSMGPGAPNFSDPRPFSQLHQKGMNSPAVQSY 300

Query: 301 IPSPASQGRSSSGYPAMEKNMQSLREVEQRPDGNGNQITSSSTSTIQDRERSSVSVPGLE 360
           IPS ASQGRSSSGYPAM+KNMQSLREVEQR DGN NQ+TSSS+ TIQ+RERSS+ VPGLE
Sbjct: 301 IPSSASQGRSSSGYPAMDKNMQSLREVEQRTDGNANQLTSSSSGTIQERERSSIPVPGLE 360

Query: 361 KQQLHFQQKSFPMYGNSGNYHTYTGSNINASSLSLKPQPHEGQVKQISQQASNFDRQVTI 420
           KQQLHFQQKSFPMYGNSGNYH YTGSNIN SSLSLKPQPHEGQ KQISQQA NFDRQVTI
Sbjct: 361 KQQLHFQQKSFPMYGNSGNYHPYTGSNINTSSLSLKPQPHEGQAKQISQQAPNFDRQVTI 420

Query: 421 NDSKRVQGGSVPHLHNNLTSQQNPWKSSTSKEQNI-----MSYVKQEPSDQVSEQNKTQH 480
           ND KRVQGG+V HL NNLTSQ +PWKSSTSKEQN      MSY+KQEPSDQVSEQNKTQH
Sbjct: 421 NDPKRVQGGNVSHLRNNLTSQPSPWKSSTSKEQNTGPLSSMSYIKQEPSDQVSEQNKTQH 480

Query: 481 SNLQGLSSIPSMQAEHVNTTPGIAKDPFDKQTSKMGFPTSNNVVPPTSTNAANSISSDSS 540
           SNLQGLSSIPSMQAE VNTTPGIAKDPF+KQTSK+ FPTSNNV+P +STNAAN ISSD++
Sbjct: 481 SNLQGLSSIPSMQAEQVNTTPGIAKDPFEKQTSKVAFPTSNNVMPQSSTNAANPISSDAN 540

Query: 541 SQQETNAVLNSQVPSATTPGMQNRAPQKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFAD 600
           S  E++AVL+SQVPSATTPGMQNRAPQKK AVGQKKPLEALGSSPPLSSKKQKVSGAF+D
Sbjct: 541 SLHESSAVLSSQVPSATTPGMQNRAPQKKGAVGQKKPLEALGSSPPLSSKKQKVSGAFSD 600

Query: 601 QSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKL 660
           QSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRASEASR+VVQEEEERLLLQKAPLQKKL
Sbjct: 601 QSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRASEASRKVVQEEEERLLLQKAPLQKKL 660

Query: 661 VEIMAKCGLKGMSNDVEKCLSLCVEERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQ 720
           +EIMAK GLK MSNDVEKCLSL VEERLRG+ISNLIRLSKQRVD EKPRHRT ITSDVRQ
Sbjct: 661 MEIMAKYGLKSMSNDVEKCLSLSVEERLRGIISNLIRLSKQRVDTEKPRHRTHITSDVRQ 720

Query: 721 QITLVNQKAREEWEKKQAEEEKLRKLNDPEDGSGVAGDKDKDEGRMKSLKVNKEEDDKMR 780
           QI LVNQKAREEWEKKQAEEEKLRKLNDPEDGS +AGDKDKDEGRMKS+KVNKEEDDKMR
Sbjct: 721 QIMLVNQKAREEWEKKQAEEEKLRKLNDPEDGSDIAGDKDKDEGRMKSVKVNKEEDDKMR 780

Query: 781 TTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGMDSASSSQAGKDAVRKSSSAAGRHG 840
           TTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGMDSAS SQ+GKD VRKSSSAAGRHG
Sbjct: 781 TTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGMDSASGSQSGKDTVRKSSSAAGRHG 840

Query: 841 KDNLEGERKGTSRKFGRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRVH 889
           KDN EG+RKGTS+KFGRNQ +A+QT+VARSISVKDVIAVLQREPQMSRSTTIYRLFN+V 
Sbjct: 841 KDNQEGDRKGTSKKFGRNQMSASQTRVARSISVKDVIAVLQREPQMSRSTTIYRLFNKVR 900

[Close]

BLAST of IVF0024579 vs. NCBI nr
Match: XP_008465950.1 (PREDICTED: transcription initiation factor TFIID subunit 4b [Cucumis melo] >KAA0038550.1 transcription initiation factor TFIID subunit 4b [Cucumis melo var. makuwa])

HSP 1 Score: 1620 bits (4196), Expect = 0.0
Identity = 880/899 (97.89%), Postives = 880/899 (97.89%), Query Frame = 0


Query: 1   MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDAQAVSQTSESDAAFPQGNNNGSS 60
           MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDAQAVSQTSESDAAFPQGNNNGSS
Sbjct: 1   MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDAQAVSQTSESDAAFPQGNNNGSS 60

Query: 61  TLSLQASSQSENTESHVQQNQNFRLKQEQHSSLMELDRSVPENQQQHSSAPFQVSKNQPQ 120
           TLSLQASSQSENTESHVQQNQNFRLKQEQHSSLMELDRSVPENQQQHSSAPFQVSKNQPQ
Sbjct: 61  TLSLQASSQSENTESHVQQNQNFRLKQEQHSSLMELDRSVPENQQQHSSAPFQVSKNQPQ 120

Query: 121 ADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQSIVA 180
           ADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQSIVA
Sbjct: 121 ADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQSIVA 180

Query: 181 EQANNPLNRSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEMNKDDFIRLMRGVVG 240
           EQANNPLNRSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEMNKDDFIRLMRGVVG
Sbjct: 181 EQANNPLNRSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEMNKDDFIRLMRGVVG 240

Query: 241 DQMLRLAVCQVQSQNA-----------IYGSWDTNFSDPRPFTQLHPKGMNPPAVQSYIP 300
           DQMLRLAVCQVQSQ               G    NFSDPRPFTQLHPKGMNPPAVQSYIP
Sbjct: 241 DQMLRLAVCQVQSQPPPSVRQLSPRMPSMGPGTPNFSDPRPFTQLHPKGMNPPAVQSYIP 300

Query: 301 SPASQGRSSSGYPAMEKNMQSLREVEQRPDGNGNQITSSSTSTIQDRERSSVSVPGLEKQ 360
           SPASQGRSSSGYPAMEKNMQSLREVEQRPDGNGNQITSSSTSTIQDRERSSVSVPGLEKQ
Sbjct: 301 SPASQGRSSSGYPAMEKNMQSLREVEQRPDGNGNQITSSSTSTIQDRERSSVSVPGLEKQ 360

Query: 361 QLHFQQKSFPMYGNSGNYHTYTGSNINASSLSLKPQPHEGQVKQISQQASNFDRQVTIND 420
           QLHFQQKSFPMYGNSGNYHTYTGSNINASSLSLKPQPHEGQVKQISQQASNFDRQVTIND
Sbjct: 361 QLHFQQKSFPMYGNSGNYHTYTGSNINASSLSLKPQPHEGQVKQISQQASNFDRQVTIND 420

Query: 421 SKRVQGGSVPHLHNNLTSQQNPWKSSTSKEQNIMSYVKQEPSDQVSEQNKTQHSNLQGLS 480
           SKRVQGGSVPHLHNNLTSQQNPWKSSTSKEQNIMSYVKQEPSDQVSEQNKTQHSNLQGLS
Sbjct: 421 SKRVQGGSVPHLHNNLTSQQNPWKSSTSKEQNIMSYVKQEPSDQVSEQNKTQHSNLQGLS 480

Query: 481 SIPSMQAEHVNTTPGIAKDPFDKQTSKMGFPTSNNVVPPTSTNAANSISSDSSSQQETNA 540
           SIPSMQAEHVNTTPGIAKDPFDKQTSKMGFPTSNNVVPPTSTNAANSISSDSSSQQETNA
Sbjct: 481 SIPSMQAEHVNTTPGIAKDPFDKQTSKMGFPTSNNVVPPTSTNAANSISSDSSSQQETNA 540

Query: 541 VLNSQVPSATTPGMQNRAPQKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFADQSIEQLN 600
           VLNSQVPSATTPGMQNRAPQKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFADQSIEQLN
Sbjct: 541 VLNSQVPSATTPGMQNRAPQKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFADQSIEQLN 600

Query: 601 DVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKLVEIMAKC 660
           DVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKLVEIMAKC
Sbjct: 601 DVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKLVEIMAKC 660

Query: 661 GLKGMSNDVEKCLSLCVEERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQQITLVNQ 720
           GLKGMSNDVEKCLSLCVEERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQQITLVNQ
Sbjct: 661 GLKGMSNDVEKCLSLCVEERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQQITLVNQ 720

Query: 721 KAREEWEKKQAEEEKLRKLNDPEDGSGVAGDKDKDEGRMKSLKVNKEEDDKMRTTAANVA 780
           KAREEWEKKQAEEEKLRKLNDPEDGSGVAGDKDKDEGRMKSLKVNKEEDDKMRTTAANVA
Sbjct: 721 KAREEWEKKQAEEEKLRKLNDPEDGSGVAGDKDKDEGRMKSLKVNKEEDDKMRTTAANVA 780

Query: 781 ARAAVGGDDMLSKWQLMAEQARQKREGGMDSASSSQAGKDAVRKSSSAAGRHGKDNLEGE 840
           ARAAVGGDDMLSKWQLMAEQARQKREGGMDSASSSQAGKDAVRKSSSAAGRHGKDNLEGE
Sbjct: 781 ARAAVGGDDMLSKWQLMAEQARQKREGGMDSASSSQAGKDAVRKSSSAAGRHGKDNLEGE 840

Query: 841 RKGTSRKFGRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRVHPEATGE 888
           RKGTSRKFGRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRVHPEATGE
Sbjct: 841 RKGTSRKFGRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRVHPEATGE 899

[Close]

BLAST of IVF0024579 vs. NCBI nr
Match: TYK31146.1 (transcription initiation factor TFIID subunit 4b [Cucumis melo var. makuwa])

HSP 1 Score: 1608 bits (4163), Expect = 0.0
Identity = 876/899 (97.44%), Postives = 876/899 (97.44%), Query Frame = 0


Query: 1   MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDAQAVSQTSESDAAFPQGNNNGSS 60
           MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDAQAVSQTSESDAAFPQGNNNGSS
Sbjct: 1   MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDAQAVSQTSESDAAFPQGNNNGSS 60

Query: 61  TLSLQASSQSENTESHVQQNQNFRLKQEQHSSLMELDRSVPENQQQHSSAPFQVSKNQPQ 120
           TLSLQASSQSENTESHVQQNQNFRLKQEQHSSLMELDRSVPENQQQHSSAPFQVSKNQPQ
Sbjct: 61  TLSLQASSQSENTESHVQQNQNFRLKQEQHSSLMELDRSVPENQQQHSSAPFQVSKNQPQ 120

Query: 121 ADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQSIVA 180
           ADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQSIVA
Sbjct: 121 ADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQSIVA 180

Query: 181 EQANNPLNRSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEMNKDDFIRLMRGVVG 240
           EQANNPLNRSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEMNKDDFIRLMRGVVG
Sbjct: 181 EQANNPLNRSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEMNKDDFIRLMRGVVG 240

Query: 241 DQMLRLAVCQVQSQNA-----------IYGSWDTNFSDPRPFTQLHPKGMNPPAVQSYIP 300
           DQMLRLAVCQVQSQ               G    NFSDPRPFTQLHPKGMNPPAVQSYIP
Sbjct: 241 DQMLRLAVCQVQSQPPPSVRQLSPRMPSMGPGTPNFSDPRPFTQLHPKGMNPPAVQSYIP 300

Query: 301 SPASQGRSSSGYPAMEKNMQSLREVEQRPDGNGNQITSSSTSTIQDRERSSVSVPGLEKQ 360
           SPASQGRSSSGYPAMEKNMQSLREVEQRPDGNGNQITSSSTSTIQDRERSSVSVPGLEKQ
Sbjct: 301 SPASQGRSSSGYPAMEKNMQSLREVEQRPDGNGNQITSSSTSTIQDRERSSVSVPGLEKQ 360

Query: 361 QLHFQQKSFPMYGNSGNYHTYTGSNINASSLSLKPQPHEGQVKQISQQASNFDRQVTIND 420
           QLHFQQKSFPMYGNSGNYHTYTGSNINASSLSLKPQPHEGQVKQISQQASNFDRQVTIND
Sbjct: 361 QLHFQQKSFPMYGNSGNYHTYTGSNINASSLSLKPQPHEGQVKQISQQASNFDRQVTIND 420

Query: 421 SKRVQGGSVPHLHNNLTSQQNPWKSSTSKEQNIMSYVKQEPSDQVSEQNKTQHSNLQGLS 480
           SKRVQGGSVPHLHNNLTSQQNPWKSSTSKEQNIMSYVKQEPSDQVSEQNKTQHSNLQGLS
Sbjct: 421 SKRVQGGSVPHLHNNLTSQQNPWKSSTSKEQNIMSYVKQEPSDQVSEQNKTQHSNLQGLS 480

Query: 481 SIPSMQAEHVNTTPGIAKDPFDKQTSKMGFPTSNNVVPPTSTNAANSISSDSSSQQETNA 540
           SIPSMQAEHVNTTPGIAKDPFDKQTSKMGFPTSNNVVPPTSTNAANSISSDSSSQQETNA
Sbjct: 481 SIPSMQAEHVNTTPGIAKDPFDKQTSKMGFPTSNNVVPPTSTNAANSISSDSSSQQETNA 540

Query: 541 VLNSQVPSATTPGMQNRAPQKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFADQSIEQLN 600
           VLNSQVPSATTPGMQNRAPQKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFADQSIEQLN
Sbjct: 541 VLNSQVPSATTPGMQNRAPQKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFADQSIEQLN 600

Query: 601 DVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKLVEIMAKC 660
           DVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKLVEIMAKC
Sbjct: 601 DVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKLVEIMAKC 660

Query: 661 GLKGMSNDVEKCLSLCVEERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQQITLVNQ 720
           GLKGMSNDVEKCLSLCVEERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQQITLVNQ
Sbjct: 661 GLKGMSNDVEKCLSLCVEERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQQITLVNQ 720

Query: 721 KAREEWEKKQAEEEKLRKLNDPEDGSGVAGDKDKDEGRMKSLKVNKEEDDKMRTTAANVA 780
           KAREEWEKKQAEEEKLRKLNDPEDGSGVAGDKDKDEGRMKSLKVNKEEDDKMRTTAANVA
Sbjct: 721 KAREEWEKKQAEEEKLRKLNDPEDGSGVAGDKDKDEGRMKSLKVNKEEDDKMRTTAANVA 780

Query: 781 ARAAVGGDDMLSKWQLMAEQARQKREGGMDSASSSQAGKDAVRKSSSAAGRHGKDNLEGE 840
           ARAAVGGDDMLSKWQLMAEQARQKREGGMDSASSSQAGKDAVRKSSSAAGRHGKDNLEG 
Sbjct: 781 ARAAVGGDDMLSKWQLMAEQARQKREGGMDSASSSQAGKDAVRKSSSAAGRHGKDNLEG- 840

Query: 841 RKGTSRKFGRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRVHPEATGE 888
              TSRKFGRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRVHPEATGE
Sbjct: 841 ---TSRKFGRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRVHPEATGE 895

[Close]

BLAST of IVF0024579 vs. NCBI nr
Match: XP_031738518.1 (transcription initiation factor TFIID subunit 4b [Cucumis sativus] >XP_031738519.1 transcription initiation factor TFIID subunit 4b [Cucumis sativus] >KGN60408.1 hypothetical protein Csa_001392 [Cucumis sativus])

HSP 1 Score: 1550 bits (4013), Expect = 0.0
Identity = 844/899 (93.88%), Postives = 861/899 (95.77%), Query Frame = 0


Query: 1   MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDAQAVSQTSESDAAFPQGNNNGSS 60
           MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGD QAV+QTSESDAAFPQGNNNGSS
Sbjct: 1   MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDVQAVAQTSESDAAFPQGNNNGSS 60

Query: 61  TLSLQASSQSENTESHVQQNQNFRLKQEQHSSLMELDRSVPENQQQHSSAPFQVSKNQPQ 120
           TLSLQASSQSEN+E+HVQQNQNFRLKQEQHSSLMEL+RSVPENQQQH+SAPFQVSKNQPQ
Sbjct: 61  TLSLQASSQSENSETHVQQNQNFRLKQEQHSSLMELERSVPENQQQHNSAPFQVSKNQPQ 120

Query: 121 ADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQSIVA 180
           ADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQS+VA
Sbjct: 121 ADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQSMVA 180

Query: 181 EQANNPLNRSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEMNKDDFIRLMRGVVG 240
           EQANNPLNRSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEMNKDDFIRLMRGVVG
Sbjct: 181 EQANNPLNRSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEMNKDDFIRLMRGVVG 240

Query: 241 DQMLRLAVCQVQSQNA-----------IYGSWDTNFSDPRPFTQLHPKGMNPPAVQSYIP 300
           DQMLRLAVCQVQSQ               G    NFSDPRPFTQLHPKGMNPPAVQSY+P
Sbjct: 241 DQMLRLAVCQVQSQPPPSVRQLPPRMPSMGPGTPNFSDPRPFTQLHPKGMNPPAVQSYMP 300

Query: 301 SPASQGRSSSGYPAMEKNMQSLREVEQRPDGNGNQITSSSTSTIQDRERSSVSVPGLEKQ 360
           SPASQGRSSSGYPAM+KNMQSLREVEQRPD NGNQITSSSTSTIQDRERSSVSVPGLEKQ
Sbjct: 301 SPASQGRSSSGYPAMDKNMQSLREVEQRPDCNGNQITSSSTSTIQDRERSSVSVPGLEKQ 360

Query: 361 QLHFQQKSFPMYGNSGNYHTYTGSNINASSLSLKPQPHEGQVKQISQQASNFDRQVTIND 420
           QLHFQQKSF MYGNSGNYH YTGSN+NASSLSLKPQPHEGQVKQISQQA NFDRQVTIND
Sbjct: 361 QLHFQQKSFNMYGNSGNYHPYTGSNMNASSLSLKPQPHEGQVKQISQQAPNFDRQVTIND 420

Query: 421 SKRVQGGSVPHLHNNLTSQQNPWKSSTSKEQNIMSYVKQEPSDQVSEQNKTQHSNLQGLS 480
           SKRVQ GSVPHLHNNLTSQQN WKSSTSKEQ I SYVKQEPSDQVSEQ+KTQHSNLQGLS
Sbjct: 421 SKRVQAGSVPHLHNNLTSQQNSWKSSTSKEQTITSYVKQEPSDQVSEQSKTQHSNLQGLS 480

Query: 481 SIPSMQAEHVNTTPGIAKDPFDKQTSKMGFPTSNNVVPPTSTNAANSISSDSSSQQETNA 540
           SIPSMQAE VNT PGIAKDPFDKQTSKMGFPT NNV+PPTSTNAANSISSDSSS  E+NA
Sbjct: 481 SIPSMQAEQVNTNPGIAKDPFDKQTSKMGFPTPNNVMPPTSTNAANSISSDSSSLHESNA 540

Query: 541 VLNSQVPSATTPGMQNRAPQKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFADQSIEQLN 600
                VPSATTPGMQNRAPQKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFADQSIEQLN
Sbjct: 541 A----VPSATTPGMQNRAPQKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFADQSIEQLN 600

Query: 601 DVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKLVEIMAKC 660
           DVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKLVEIMAKC
Sbjct: 601 DVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKLVEIMAKC 660

Query: 661 GLKGMSNDVEKCLSLCVEERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQQITLVNQ 720
           GLKGMSNDVEKCLSLCVEERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQQITLVNQ
Sbjct: 661 GLKGMSNDVEKCLSLCVEERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQQITLVNQ 720

Query: 721 KAREEWEKKQAEEEKLRKLNDPEDGSGVAGDKDKDEGRMKSLKVNKEEDDKMRTTAANVA 780
           KAREEWEKKQAEEEKLRKLNDP+DGSGV+GDK+KDEGRMKSLKVNKEEDDKMRTTAANVA
Sbjct: 721 KAREEWEKKQAEEEKLRKLNDPDDGSGVSGDKEKDEGRMKSLKVNKEEDDKMRTTAANVA 780

Query: 781 ARAAVGGDDMLSKWQLMAEQARQKREGGMDSASSSQAGKDAVRKSSSAAGRHGKDNLEGE 840
           ARAAVGGDDMLSKWQLMAEQARQKREGG+DSASSSQAGKDAVRKSSSAAGRHGKDNLEGE
Sbjct: 781 ARAAVGGDDMLSKWQLMAEQARQKREGGVDSASSSQAGKDAVRKSSSAAGRHGKDNLEGE 840

Query: 841 RKGTSRKFGRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRVHPEATGE 888
           RKGTSRKFGRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRVHPE+TGE
Sbjct: 841 RKGTSRKFGRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRVHPESTGE 895

[Close]

BLAST of IVF0024579 vs. NCBI nr
Match: XP_038877250.1 (transcription initiation factor TFIID subunit 4b isoform X1 [Benincasa hispida])

HSP 1 Score: 1481 bits (3834), Expect = 0.0
Identity = 810/905 (89.50%), Postives = 842/905 (93.04%), Query Frame = 0


Query: 1   MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDAQAVSQTSESDAAFPQGNNNGSS 60
           MDPSIMKLLEDDEDE+MHSGAAV+AFQAALNRDIEGD  AVSQTSESDAAFP+GNNNGSS
Sbjct: 1   MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRDIEGDVHAVSQTSESDAAFPRGNNNGSS 60

Query: 61  TLSLQASSQSENTESHVQQNQNFRLKQEQHSSLMELDRSVPENQQQHSSAPFQVSKNQPQ 120
           +LSLQASSQ+ENTESHVQQ QNFR KQEQHSSLMEL+RSVPENQQQHSSAP QV KNQP 
Sbjct: 61  SLSLQASSQNENTESHVQQEQNFRPKQEQHSSLMELERSVPENQQQHSSAPLQVPKNQPA 120

Query: 121 ADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQSIVA 180
           ADREQGE EQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQS+VA
Sbjct: 121 ADREQGEAEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQSMVA 180

Query: 181 EQANNPLNRSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEMNKDDFIRLMRGVVG 240
           EQANNP NRSKQVPFASLMPVLMPQLDKDR MQL TLFNRLK+NEMNKDDFIRLMRGVVG
Sbjct: 181 EQANNPQNRSKQVPFASLMPVLMPQLDKDRAMQLHTLFNRLKKNEMNKDDFIRLMRGVVG 240

Query: 241 DQMLRLAVCQVQSQNA-----------IYGSWDTNFSDPRPFTQLHPKGMNPPAVQSYIP 300
           DQMLRLAVCQVQSQ               G    NFSDPRPF QLH KGMN PAVQSY+P
Sbjct: 241 DQMLRLAVCQVQSQPPPSVRQLSPRMPSMGPGAPNFSDPRPFAQLHQKGMNSPAVQSYMP 300

Query: 301 SPASQGRSSSGYPAMEKNMQSLREVEQRPDGNGNQITSSSTSTIQDRERSSVSVPGLEKQ 360
           S ASQGRSSSGYPAM+KNMQSLREVEQRPD NGNQ+TSSST TIQ+RERSSV VPGLEKQ
Sbjct: 301 SSASQGRSSSGYPAMDKNMQSLREVEQRPDNNGNQLTSSSTGTIQERERSSVPVPGLEKQ 360

Query: 361 QLHFQQKSFPMYGNSGNYHTYTGSNINASSLSLKPQPHEGQVKQISQQASNFDRQVTIND 420
           QLHFQQKSFPMYGNS +YH YTGSNINASSLSLKPQPHEGQVKQISQQA  FDRQVTIND
Sbjct: 361 QLHFQQKSFPMYGNSSSYHPYTGSNINASSLSLKPQPHEGQVKQISQQAPTFDRQVTIND 420

Query: 421 SKRVQGGSVPHLHNNLTSQQNPWKSSTSKEQNI-----MSYVKQEPSDQVSEQNKTQHSN 480
           SKRVQGG+VPHLH+N+T+QQNPWKSSTSKEQN      MSY+ QEPSDQVSEQNKTQHSN
Sbjct: 421 SKRVQGGNVPHLHSNVTAQQNPWKSSTSKEQNTGPLSSMSYIAQEPSDQVSEQNKTQHSN 480

Query: 481 LQGLSSIPSMQAEHVNTTPGIAKDPFDKQTSKMGFPTSNNVVPPTSTNAANSISSDSSSQ 540
           LQ LSSIPSMQAEHVNTTPGIAKDPFDKQTSKMGFPTSNNV+PPTSTNAANSISSDSSS 
Sbjct: 481 LQSLSSIPSMQAEHVNTTPGIAKDPFDKQTSKMGFPTSNNVMPPTSTNAANSISSDSSSL 540

Query: 541 QETNAVLNSQVPSATTPGMQNRAPQKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFADQS 600
            E+NA+L+SQVPSA TPGMQNRAP KKAAVGQKKPLEALGSSPPLSSKKQKVSGAF+DQS
Sbjct: 541 HESNAMLSSQVPSANTPGMQNRAPPKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFSDQS 600

Query: 601 IEQLNDVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKLVE 660
           IEQLNDVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKLVE
Sbjct: 601 IEQLNDVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKLVE 660

Query: 661 IMAKCGLKGMSNDVEKCLSLCVEERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQQI 720
           IMAKCGLKGMSNDVEKCLSLCVEERLRG+ISNLIRLSKQRVD EK +HR VITSDVRQQI
Sbjct: 661 IMAKCGLKGMSNDVEKCLSLCVEERLRGIISNLIRLSKQRVDTEKTKHRMVITSDVRQQI 720

Query: 721 TLVNQKAREEWEKKQAEEEKLRKLNDPEDGSGVAGDKDKDEGRMKSL-KVNKEEDDKMRT 780
            L NQKAREEWEKKQAEEEKLRKLNDPEDGSGVAGDK+KDEGRMKS+ KVNKEEDDKMRT
Sbjct: 721 MLFNQKAREEWEKKQAEEEKLRKLNDPEDGSGVAGDKEKDEGRMKSVNKVNKEEDDKMRT 780

Query: 781 TAANVAARAAVGGDDMLSKWQLMAEQARQKREGGMDSASSSQAGKDAVRKSSSAAGRHGK 840
           TAANVAARAAVGGDD+LSKWQLMAEQARQKREGGMDSAS SQ+GKDAVRKSSSAA RHGK
Sbjct: 781 TAANVAARAAVGGDDVLSKWQLMAEQARQKREGGMDSASGSQSGKDAVRKSSSAA-RHGK 840

Query: 841 DNLEGERKGTSRKFGRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRVHP 888
           DNLEGERKG S+KFG+NQTNATQT+V RSISVKDVIAVLQREPQMSRSTTIYRLFNRVHP
Sbjct: 841 DNLEGERKGNSKKFGKNQTNATQTRVVRSISVKDVIAVLQREPQMSRSTTIYRLFNRVHP 900

[Close]

BLAST of IVF0024579 vs. NCBI nr
Match: XP_022952261.1 (transcription initiation factor TFIID subunit 4b isoform X1 [Cucurbita moschata] >XP_022952262.1 transcription initiation factor TFIID subunit 4b isoform X1 [Cucurbita moschata] >XP_022952263.1 transcription initiation factor TFIID subunit 4b isoform X1 [Cucurbita moschata])

HSP 1 Score: 1420 bits (3676), Expect = 0.0
Identity = 782/906 (86.31%), Postives = 828/906 (91.39%), Query Frame = 0


Query: 1   MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDAQAVSQTSESDAAFPQGNNNGSS 60
           MDPSIMKLLEDDEDE+MHSGAAV+AFQAALNRDIEGD  AVSQ  ESDAAFP+G+N G S
Sbjct: 1   MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRDIEGDVPAVSQAPESDAAFPRGSN-GPS 60

Query: 61  TLSLQASSQSENTESHVQQNQNFRLKQEQHSSLMELDR--SVPENQQQHSSAPFQVSKNQ 120
            LSLQAS Q+E TESH QQ+QNFR KQEQHSSLMEL+R  S+PENQQQH++AP Q SKNQ
Sbjct: 61  NLSLQAS-QNEKTESHAQQDQNFRPKQEQHSSLMELERCSSLPENQQQHNAAPLQASKNQ 120

Query: 121 PQADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQSI 180
           PQADREQG+ EQVSAQFSQTAGLQ SEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQ++
Sbjct: 121 PQADREQGDTEQVSAQFSQTAGLQGSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQTM 180

Query: 181 VAEQANNPLNRSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEMNKDDFIRLMRGV 240
           V+EQANNPLNRSKQVPFASLMPVLMPQLDKDR MQLQTLFNRLKRNEMNKDDFIRLMRGV
Sbjct: 181 VSEQANNPLNRSKQVPFASLMPVLMPQLDKDRAMQLQTLFNRLKRNEMNKDDFIRLMRGV 240

Query: 241 VGDQMLRLAVCQVQSQNA-----------IYGSWDTNFSDPRPFTQLHPKGMNPPAVQSY 300
           VGDQMLRLAVCQVQ+Q               G    NFSDPRPF+QLH KGMN PAVQSY
Sbjct: 241 VGDQMLRLAVCQVQAQPPPSVRQLSPRMPSMGPGAPNFSDPRPFSQLHQKGMNSPAVQSY 300

Query: 301 IPSPASQGRSSSGYPAMEKNMQSLREVEQRPDGNGNQITSSSTSTIQDRERSSVSVPGLE 360
           IPS ASQGRSSSGYPAM+KNMQSLREVEQR DGN NQ+TSSS+ TIQ+RERSS+ VPGLE
Sbjct: 301 IPSSASQGRSSSGYPAMDKNMQSLREVEQRTDGNANQLTSSSSGTIQERERSSIPVPGLE 360

Query: 361 KQQLHFQQKSFPMYGNSGNYHTYTGSNINASSLSLKPQPHEGQVKQISQQASNFDRQVTI 420
           KQQLHFQQKSFPMYGNSGNYH YTGSNIN SSLSLKPQPHEGQ KQISQQA NFDRQVTI
Sbjct: 361 KQQLHFQQKSFPMYGNSGNYHPYTGSNINTSSLSLKPQPHEGQAKQISQQAPNFDRQVTI 420

Query: 421 NDSKRVQGGSVPHLHNNLTSQQNPWKSSTSKEQNI-----MSYVKQEPSDQVSEQNKTQH 480
           ND KRVQGG+V HL NNLTSQ +PWKSSTSKEQN      MSY+KQEPSDQVSEQNKTQH
Sbjct: 421 NDPKRVQGGNVSHLRNNLTSQPSPWKSSTSKEQNTGPLSSMSYIKQEPSDQVSEQNKTQH 480

Query: 481 SNLQGLSSIPSMQAEHVNTTPGIAKDPFDKQTSKMGFPTSNNVVPPTSTNAANSISSDSS 540
           SNLQGLSSIPSMQAE VNTTPGIAKDPF+KQTSK+ FPTSNNV+P +STNAAN ISSD++
Sbjct: 481 SNLQGLSSIPSMQAEQVNTTPGIAKDPFEKQTSKVAFPTSNNVMPQSSTNAANPISSDAN 540

Query: 541 SQQETNAVLNSQVPSATTPGMQNRAPQKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFAD 600
           S  E++AVL+SQVPSATTPGMQNRAPQKK AVGQKKPLEALGSSPPLSSKKQKVSGAF+D
Sbjct: 541 SLHESSAVLSSQVPSATTPGMQNRAPQKKGAVGQKKPLEALGSSPPLSSKKQKVSGAFSD 600

Query: 601 QSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKL 660
           QSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRASEASR+VVQEEEERLLLQKAPLQKKL
Sbjct: 601 QSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRASEASRKVVQEEEERLLLQKAPLQKKL 660

Query: 661 VEIMAKCGLKGMSNDVEKCLSLCVEERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQ 720
           +EIMAK GLK MSNDVEKCLSL VEERLRG+ISNLIRLSKQRVD EKPRHRT ITSDVRQ
Sbjct: 661 MEIMAKYGLKSMSNDVEKCLSLSVEERLRGIISNLIRLSKQRVDTEKPRHRTHITSDVRQ 720

Query: 721 QITLVNQKAREEWEKKQAEEEKLRKLNDPEDGSGVAGDKDKDEGRMKSLKVNKEEDDKMR 780
           QI LVNQKAREEWEKKQAEEEKLRKLNDPEDGS +AGDKDKDEGRMKS+KVNKEEDDKMR
Sbjct: 721 QIMLVNQKAREEWEKKQAEEEKLRKLNDPEDGSDIAGDKDKDEGRMKSVKVNKEEDDKMR 780

Query: 781 TTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGMDSASSSQAGKDAVRKSSSAAGRHG 840
           TTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGMDSAS SQ+GKD VRKSSSAAGRHG
Sbjct: 781 TTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGMDSASGSQSGKDTVRKSSSAAGRHG 840

Query: 841 KDNLEGERKGTSRKFGRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRVH 888
           KDN EG+RKGTS+KFGRNQ +A+QT+VARSISVKDVIAVLQREPQMSRSTTIYRLFN+V 
Sbjct: 841 KDNQEGDRKGTSKKFGRNQMSASQTRVARSISVKDVIAVLQREPQMSRSTTIYRLFNKVR 900

[Close]

BLAST of IVF0024579 vs. TAIR 10
Match: AT5G43130.1 (TBP-associated factor 4 )

HSP 1 Score: 609.0 bits (1569), Expect = 6.1e-174
Identity = 435/919 (47.33%), Postives = 565/919 (61.48%), Query Frame = 0


Query: 1   MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDAQAVSQTSESDAAFPQGNNNGSS 60
           MDPSI KLLE+DEDESMHSGA VDAFQAALNRDIEG     S T+        GNN+   
Sbjct: 1   MDPSIFKLLEEDEDESMHSGADVDAFQAALNRDIEG-----SMTTSIPHVTNPGNNH--- 60

Query: 61  TLSLQASSQSENTESHVQQNQNFRLKQEQHS----SLMELDRSVPENQQQH----SSAPF 120
                +S Q  +T  +   + N  + Q QHS     + E + S  ENQ QH    ++ P 
Sbjct: 61  -----SSRQQFSTWKNGIGDSNINV-QTQHSLESTQMKEQEGSTLENQHQHDLKRANEP- 120

Query: 121 QVSKNQPQADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKM 180
            +  NQPQ     G+  +  +Q  Q+ GL +SEK P   N+S+R  N+++ESQY+KLQKM
Sbjct: 121 HLQHNQPQDLHRAGQLWENPSQVPQSTGLPISEKNP-TGNESDRSHNQESESQYMKLQKM 180

Query: 181 SNQQSIVAEQANNPLN------RSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEM 240
           S+QQ+   E   NP+N        KQVPFA+L+P LM QLDKDR +QL+TL+ RLK+NE+
Sbjct: 181 SSQQARGVEPPVNPMNVNPINRNPKQVPFAALLPTLMNQLDKDRALQLRTLYARLKKNEI 240

Query: 241 NKDDFIRLMRGVVGDQMLRLAVCQVQSQNAIYGSWDTNFSDPRPFTQLHPKGMNPPAVQS 300
            K+ F R M+ +VGDQMLR+AV ++Q  N                               
Sbjct: 241 PKEGFTRHMKDIVGDQMLRMAVSKLQQVN------------------------------- 300

Query: 301 YIPSPASQGRSSSGYPAMEKNMQSLREVEQRPDGNGNQITSSSTSTIQDRERSSVSVPGL 360
                 +QG+     P+ E N Q  +   +    + NQ+ SS++ T+     SSV V GL
Sbjct: 301 -----YNQGKIGIQAPSTEINNQKSQSDPRAV--HLNQLPSSASGTL----GSSVPVQGL 360

Query: 361 EKQQLHFQQ---KSFPMYGNSGNYHTYTGSNINASSLSLKPQPHEGQVKQIS-------- 420
            K   H  Q    SFPMY  SG++H++ G N NAS  +L+P  H+  ++ ++        
Sbjct: 361 TKHPQHQMQHPPSSFPMYTTSGSFHSFPGPNTNASGSTLRPHLHDSHMRHVAHNQPMGST 420

Query: 421 ------QQASN------FDRQVTINDSKRVQGGSVPHLHNNLTSQQNPWKSSTSKEQNIM 480
                 Q  +N      F+R  ++ND  RVQGG+  H  N+ +   N    S   + + +
Sbjct: 421 GLGGPPQSTTNMMTMPKFERPSSVNDPSRVQGGATSHFQNSSSLPLN----SAPGQGSSV 480

Query: 481 SYVKQEPSDQVSEQNKTQHSNLQGLSSIPSMQAEHVNTTPGIAKDPFDKQTSKMGFPTSN 540
           S+VKQE  DQ  E+N                     N     + +  +K++S+M   T N
Sbjct: 481 SHVKQESVDQSFEKN---------------------NAASMTSNEDLEKESSRMVLSTPN 540

Query: 541 NVVPPTSTNAANSISSDSSSQQETNAVLNSQVPSATTPGMQN-RAPQKKAAVGQKKPLEA 600
           N+ P      A+S+S   ++Q + +  +NS+ P  T+ G  N R P KK +VGQKKPLE 
Sbjct: 541 NMAP------ASSVSPSMTTQLDASTTMNSRGPLGTSQGGANARMPPKKPSVGQKKPLET 600

Query: 601 LGSSPPLSSKKQKVSGAFADQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRASEASRR 660
           LGSSPP  SKKQKV+G   DQSIEQLNDVTAVSGVN+REEEEQLFS AKED R SEASRR
Sbjct: 601 LGSSPPPPSKKQKVAGNSMDQSIEQLNDVTAVSGVNLREEEEQLFSGAKEDGRVSEASRR 660

Query: 661 VVQEEEERLLLQKAPLQKKLVEIMAKCGLKGMSNDVEKCLSLCVEERLRGVISNLIRLSK 720
           VV EEEERL+LQK PLQ+KL EIMAK GLK +SNDVE+CLSLCVEER+RG++S++IRLSK
Sbjct: 661 VVHEEEERLILQKNPLQRKLAEIMAKAGLKQISNDVERCLSLCVEERMRGLLSHIIRLSK 720

Query: 721 QRVDAEKPRHRTVITSDVRQQITLVNQKAREEWEKKQAEEEKLRKLNDPEDG-SGVAGDK 780
           QRVDAEK RHRT ITSD+R QI  +NQK +EEWEKKQAE EKL+K ++ E+G  GV  +K
Sbjct: 721 QRVDAEKSRHRTFITSDIRLQINEMNQKVKEEWEKKQAEAEKLKKPSESEEGDGGVDSEK 780

Query: 781 DKDEGRMKSLKVNKEEDDKMRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGMDSA 840
           DK++ R K +K NKE+DDKMRTTAANVAARAAVGGDD   KWQLMAE ARQK        
Sbjct: 781 DKEDNRSKGVKGNKEDDDKMRTTAANVAARAAVGGDDAFLKWQLMAE-ARQK-------- 821

Query: 841 SSSQAGKDAVRKSSSAAGRHGKDNLEGERK--GT-SRKFGRNQTNATQTKVARSISVKDV 878
           S S+AGKD  +K++S  G++ KD  +G R+  GT  R+ G+NQ ++ Q KV R+ISVKDV
Sbjct: 841 SVSEAGKDGNQKTTSGGGKNSKDRQDGGRRFSGTGGRRVGKNQGSSLQPKVVRTISVKDV 821

[Close]

BLAST of IVF0024579 vs. TAIR 10
Match: AT5G43130.2 (TBP-associated factor 4 )

HSP 1 Score: 597.8 bits (1540), Expect = 1.4e-170
Identity = 435/948 (45.89%), Postives = 565/948 (59.60%), Query Frame = 0


Query: 1   MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDAQAVSQTSESDAAFPQGNNNGSS 60
           MDPSI KLLE+DEDESMHSGA VDAFQAALNRDIEG     S T+        GNN+   
Sbjct: 1   MDPSIFKLLEEDEDESMHSGADVDAFQAALNRDIEG-----SMTTSIPHVTNPGNNH--- 60

Query: 61  TLSLQASSQSENTESHVQQNQNFRLKQEQHS----SLMELDRSVPENQQQH----SSAPF 120
                +S Q  +T  +   + N  + Q QHS     + E + S  ENQ QH    ++ P 
Sbjct: 61  -----SSRQQFSTWKNGIGDSNINV-QTQHSLESTQMKEQEGSTLENQHQHDLKRANEP- 120

Query: 121 QVSKNQPQADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKM 180
            +  NQPQ     G+  +  +Q  Q+ GL +SEK P   N+S+R  N+++ESQY+KLQKM
Sbjct: 121 HLQHNQPQDLHRAGQLWENPSQVPQSTGLPISEKNP-TGNESDRSHNQESESQYMKLQKM 180

Query: 181 SNQQSIVAEQANNPLN------RSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEM 240
           S+QQ+   E   NP+N        KQVPFA+L+P LM QLDKDR +QL+TL+ RLK+NE+
Sbjct: 181 SSQQARGVEPPVNPMNVNPINRNPKQVPFAALLPTLMNQLDKDRALQLRTLYARLKKNEI 240

Query: 241 NKDDFIRLMRGVVGDQMLRLAVCQVQSQNAIYGSWDTNFSDPRPFTQLHPKGMNPPAVQS 300
            K+ F R M+ +VGDQMLR+AV ++Q  N                               
Sbjct: 241 PKEGFTRHMKDIVGDQMLRMAVSKLQQVN------------------------------- 300

Query: 301 YIPSPASQGRSSSGYPAMEKNMQSLREVEQRPDGNGNQITSSSTSTIQDRERSSVSVPGL 360
                 +QG+     P+ E N Q  +   +    + NQ+ SS++ T+     SSV V GL
Sbjct: 301 -----YNQGKIGIQAPSTEINNQKSQSDPRAV--HLNQLPSSASGTL----GSSVPVQGL 360

Query: 361 EKQQLHFQQ---KSFPMYGNSGNYHTYTGSNINASSLSLKPQPHEGQVKQIS-------- 420
            K   H  Q    SFPMY  SG++H++ G N NAS  +L+P  H+  ++ ++        
Sbjct: 361 TKHPQHQMQHPPSSFPMYTTSGSFHSFPGPNTNASGSTLRPHLHDSHMRHVAHNQPMGST 420

Query: 421 ------QQASN------FDRQVTINDSKRVQGGSVPHLHNNLTSQQNPWKSSTSKEQNIM 480
                 Q  +N      F+R  ++ND  RVQGG+  H  N+ +   N    S   + + +
Sbjct: 421 GLGGPPQSTTNMMTMPKFERPSSVNDPSRVQGGATSHFQNSSSLPLN----SAPGQGSSV 480

Query: 481 SYVKQEPSDQVSEQNKTQHSNLQGLSSIPSMQAEHVNTTPGIAKDPFDKQTSKMGFPTSN 540
           S+VKQE  DQ  E+N                     N     + +  +K++S+M   T N
Sbjct: 481 SHVKQESVDQSFEKN---------------------NAASMTSNEDLEKESSRMVLSTPN 540

Query: 541 NVVPPTSTNAANSISSDSSSQQETNAVLNSQVPSATTPGMQN-RAPQKKAAVGQKKPLEA 600
           N+ P      A+S+S   ++Q + +  +NS+ P  T+ G  N R P KK +VGQKKPLE 
Sbjct: 541 NMAP------ASSVSPSMTTQLDASTTMNSRGPLGTSQGGANARMPPKKPSVGQKKPLET 600

Query: 601 LGSSPPLSSKKQKVSGAFADQSIEQLNDVTAVSGVNIREEEEQLFSSAKEDSRASEASRR 660
           LGSSPP  SKKQKV+G   DQSIEQLNDVTAVSGVN+REEEEQLFS AKED R SEASRR
Sbjct: 601 LGSSPPPPSKKQKVAGNSMDQSIEQLNDVTAVSGVNLREEEEQLFSGAKEDGRVSEASRR 660

Query: 661 VVQEEEERLLLQKAPLQKKLVEIMAKCGLKGMSNDVEKCLSLCVEERLRGVISNLIRLSK 720
           VV EEEERL+LQK PLQ+KL EIMAK GLK +SNDVE+CLSLCVEER+RG++S++IRLSK
Sbjct: 661 VVHEEEERLILQKNPLQRKLAEIMAKAGLKQISNDVERCLSLCVEERMRGLLSHIIRLSK 720

Query: 721 QRVDAEKPRHRTVITSDVRQQITLVNQKAREEWEKKQAEEEKLRKLNDPEDG-SGVAGDK 780
           QRVDAEK RHRT ITSD+R QI  +NQK +EEWEKKQAE EKL+K ++ E+G  GV  +K
Sbjct: 721 QRVDAEKSRHRTFITSDIRLQINEMNQKVKEEWEKKQAEAEKLKKPSESEEGDGGVDSEK 780

Query: 781 DKDEGRMKSLKVNKEEDDKMRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGMDSA 840
           DK++ R K +K NKE+DDKMRTTAANVAARAAVGGDD   KWQLMAE ARQK        
Sbjct: 781 DKEDNRSKGVKGNKEDDDKMRTTAANVAARAAVGGDDAFLKWQLMAE-ARQK-------- 840

Query: 841 SSSQAGKDAVRKSSSAAGRHGKDNLEGERK--GT-------------------------- 878
           S S+AGKD  +K++S  G++ KD  +G R+  GT                          
Sbjct: 841 SVSEAGKDGNQKTTSGGGKNSKDRQDGGRRFSGTESSCGVGIVYRVSSSRFWFAMMSFGF 850

[Close]

BLAST of IVF0024579 vs. TAIR 10
Match: AT1G27720.1 (TBP-associated factor 4B )

HSP 1 Score: 362.5 bits (929), Expect = 1.0e-99
Identity = 288/764 (37.70%), Postives = 429/764 (56.15%), Query Frame = 0


Query: 151 VNDSNRMQNRDNESQYLKLQKMSNQQSIVAEQANNPLNRSKQVPFASLMPVLMPQLDKDR 210
           +N++   ++   + +Y+KLQKMS++++   E+  +P+N + ++  A +  +L   +D   
Sbjct: 43  INNTTGNESEKPQPRYMKLQKMSSKETPWVEKTVDPVNHNLRL--ARVTDLLRTVVDHQP 102

Query: 211 GMQLQ--TLFNRLKRNEMNKDDFIRLMRGVVGDQMLRLAVCQVQSQNAIYGSWDTNFSDP 270
           G +     L  +LKR E+  ++F+R +R +VGDQ++R  + Q+                 
Sbjct: 103 GKKTHCLNLHYKLKRKELTMEEFMRQLRDLVGDQIIRSVISQL----------------- 162

Query: 271 RPFTQLHPKGMNPPAVQSYIPSPASQGRSSSGYPAMEKNMQSLREVEQRPDGNGNQITSS 330
               QL P  M        I  P   GRS+  +  + K+ +   +     + + NQ++S+
Sbjct: 163 ---PQLKPGNMG-------IKVP---GRSN--HDKVSKSAEFTAQESDPREVHVNQLSST 222

Query: 331 STSTIQDRERSSVSVPGLEK---QQLHFQQKSFPMYGNSGNYHTYTGSNINASSLSLKPQ 390
           ++ T+     SS +V GL K   Q +     SF M   SG+ + Y G+N+ +   S + +
Sbjct: 223 TSGTL----NSSTTVQGLNKHPEQHMQLPSSSFHMDTKSGSLNPYPGTNVTSPGSSSRAK 282

Query: 391 PHEGQVKQISQQAS------------------NFDRQVTINDSKRVQGGSVPHLHNN--L 450
             + Q ++ +Q                      F+R   +N   RVQ G +     N   
Sbjct: 283 LPDFQHRENNQNVGIASVGGPTKSTINMTTVPKFERPTFVNGPSRVQDGPISDFPKNSSF 342

Query: 451 TSQQNPWKSSTSKEQNI-----MSYVKQEPSDQVSEQ-NKTQHSNLQGLSSIPSMQAEHV 510
                PW+ S +K+  +     + +V+ +  DQ  EQ +K ++   QG++++P  Q    
Sbjct: 343 PLYSAPWQGSVTKDHTVGPSSSVIHVEHKLIDQSFEQAHKPRYLVQQGVTNVPLKQK--- 402

Query: 511 NTTPGIAKDPFDKQTSKMGFPTSNNVVPPTSTNAANSISSDSSSQQETNAVLNSQVPSAT 570
           N  P  + D  +KQ+SKMG          TST +A+S+    ++Q +++ ++N   PS T
Sbjct: 403 NAIPISSNDDLEKQSSKMGL--------FTSTTSASSVFPSMTTQLDSSTMVNMPAPSET 462

Query: 571 TPGMQN-RAPQKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFADQSIEQLNDVTAVSGVN 630
            P + N     K  +VGQKKPLEALGSS P S KKQK+ G  +D+SIE+ NDVTAVSG+N
Sbjct: 463 IPKIANVTVTPKMPSVGQKKPLEALGSSLPPSRKKQKICGTSSDESIEKFNDVTAVSGIN 522

Query: 631 IREEEEQLFSSA-KEDSRASEASRRVVQEEEERLLLQKAPLQKKLVEIMAKCGLKGMSND 690
           +REEE+QL  S  K++ R S+A RR+V  EEER LLQK PLQ+KL EIM K GLK + +D
Sbjct: 523 LREEEKQLLDSGPKKNDRVSKAYRRLVHGEEERTLLQKIPLQRKLTEIMGKSGLKHIDHD 582

Query: 691 VEKCLSLCVEERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQQITLVNQKAREEWEK 750
           VE+CLSLCVEER+RG++ N+IR+SKQR DAEK R+RT ITSD+R++I  +NQK +EEWEK
Sbjct: 583 VERCLSLCVEERMRGLLFNIIRISKQRTDAEKCRNRTFITSDIRKEINEMNQKVKEEWEK 642

Query: 751 KQAEEEKLRKLNDPEDGSGVAGDKDKDEGRMKSLKVNKEEDDKMRTTAANVAARAAVGGD 810
           K + EEK ++            D +K++ R   +K NK+++DK R  AANVA RAAVGGD
Sbjct: 643 KHSGEEKNKE-----------NDTEKEDQRSNEVKANKKDEDKERAKAANVAVRAAVGGD 702

Query: 811 DMLSKWQLMAEQARQKREGGMDSASSSQAGKDAVRKSSSAAGRHGKDNLEGERKGTSRKF 870
           D  SKW+LMAE ARQ                    +SS   GR+ K  L G   GT  +F
Sbjct: 703 DRFSKWKLMAE-ARQ--------------------RSSPGPGRNSK-KLSG---GT--QF 716

Query: 871 GRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRV 882
           G+NQ      KV RSISVKDVIAV+++EPQMSRST +YR++NR+
Sbjct: 763 GKNQ---GLPKVVRSISVKDVIAVVEKEPQMSRSTLLYRVYNRI 716

The following BLAST results are available for this feature:

BLAST of IVF0024579 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4K4L7	2.0e-169	45.89	Transcription initiation factor TFIID subunit 4b OS=Arabidopsis thaliana OX=3702...	[more]
Q6SJR1	1.4e-98	37.70	Transcription initiation factor TFIID subunit 4 OS=Arabidopsis thaliana OX=3702 ...	[more]
O00268	1.8e-05	24.10	Transcription initiation factor TFIID subunit 4 OS=Homo sapiens OX=9606 GN=TAF4 ...	[more]

BLAST of IVF0024579 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T5I5	0.0e+00	97.89	Transcription initiation factor TFIID subunit 4b OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3CQ23	0.0e+00	97.89	transcription initiation factor TFIID subunit 4b OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A5D3E681	0.0e+00	97.44	Transcription initiation factor TFIID subunit 4b OS=Cucumis melo var. makuwa OX=...	[more]
A0A0A0LF46	0.0e+00	93.88	RST domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G903480 PE=3 SV...	[more]
A0A6J1GJW9	0.0e+00	86.31	transcription initiation factor TFIID subunit 4b isoform X1 OS=Cucurbita moschat...	[more]

BLAST of IVF0024579 vs. NCBI nr


Match Name	Identity	Description
XP_008465950.1	97.89	PREDICTED: transcription initiation factor TFIID subunit 4b [Cucumis melo] >KAA0...	[more]
TYK31146.1	97.44	transcription initiation factor TFIID subunit 4b [Cucumis melo var. makuwa]	[more]
XP_031738518.1	93.88	transcription initiation factor TFIID subunit 4b [Cucumis sativus] >XP_031738519...	[more]
XP_038877250.1	89.50	transcription initiation factor TFIID subunit 4b isoform X1 [Benincasa hispida]	[more]
XP_022952261.1	86.31	transcription initiation factor TFIID subunit 4b isoform X1 [Cucurbita moschata]...	[more]

BLAST of IVF0024579 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43130.1	6.1e-174	47.33	TBP-associated factor 4	[more]
AT5G43130.2	1.4e-170	45.89	TBP-associated factor 4	[more]
AT1G27720.1	1.0e-99	37.70	TBP-associated factor 4B	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 708..728
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 796..811
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 788..849
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 715..763
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 604..623
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 495..546
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 413..468
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 314..345
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 308..345
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 481..578
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 814..836
None	No IPR available	PANTHER	PTHR15138:SF14	IP01149P-RELATED	coord: 42..881
IPR007900	Transcription initiation factor TFIID component TAF4, C-terminal	PFAM	PF05236	TAF4	coord: 588..877 e-value: 2.9E-81 score: 273.2
IPR007900	Transcription initiation factor TFIID component TAF4, C-terminal	CDD	cd08045	TAF4	coord: 583..876 e-value: 8.33613E-48 score: 167.121
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 632..678 e-value: 7.8E-9 score: 37.2
IPR022003	RST domain	PFAM	PF12174	RST	coord: 189..252 e-value: 1.5E-18 score: 66.4
IPR022003	RST domain	PROSITE	PS51879	RST	coord: 186..257 score: 28.967152
IPR045144	Transcription initiation factor TFIID component TAF4	PANTHER	PTHR15138	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4	coord: 42..881

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0024579.2	IVF0024579.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006352	DNA-templated transcription, initiation
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005669	transcription factor TFIID complex
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0003743	translation initiation factor activity