IVF0024570 (gene) Melon (IVF77) v1

Overview
NameIVF0024570
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr11: 22148970 .. 22149389 (-)
RNA-Seq ExpressionIVF0024570
SyntenyIVF0024570
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGATGAAACAACTCTACCTTTCCCTCTCTAAGATGACGATGATGATGCAACTCCACATCTACTCTTTCCAAGATGACAACAGTGGTGTAGCTTTGCCTCCGCGTCTCCATGATAATGACGATGGTGCAGCTCCACTTAAGCGTCTCCAAGATGACAATGATGGTGTAGCTCCGCCTTCCTCTCTCAAAGATGAAAACAACGGTGCAACTTTACCTCTGCCTATCCAAGAAGACGACGACAGTGCATCTCTGCCTCACATATCCAAGAACATGACAATGGTGCAGCTCCACCTCTGCCTCTCTAACATGACGATGATGGTGCAACTCCCCCTTTCTAAGATGACGATGATGGTGCAACTTCGGTTTCGCTTCTCCAAAGATGACGTTGACAATGCAACTCCGCCTTCGTCTCTCTAA

mRNA sequence

ATGACGATGAAACAACTCTACCTTTCCCTCTCTAAGATGACGATGATGATGCAACTCCACATCTACTCTTTCCAAGATGACAACAGTGGTGTAGCTTTGCCTCCGCGTCTCCATGATAATGACGATGGTGCAGCTCCACTTAAGCGTCTCCAAGATGACAATGATGGTGTAGCTCCGCCTTCCTCTCTCAAAGATGAAAACAACGGTGCAACTTTACCTCTGCCTATCCAAGAAGACGACGACAGTGCATCTCTGCCTCACATATCCAAGAACATGACAATGGTGCAGCTCCACCTCTGCCTCTCTAACATGACGATGATGGTGCAACTCCCCCTTTCTAAGATGACGATGATGGTGCAACTTCGGTTTCGCTTCTCCAAAGATGACGTTGACAATGCAACTCCGCCTTCGTCTCTCTAA

Coding sequence (CDS)

ATGACGATGAAACAACTCTACCTTTCCCTCTCTAAGATGACGATGATGATGCAACTCCACATCTACTCTTTCCAAGATGACAACAGTGGTGTAGCTTTGCCTCCGCGTCTCCATGATAATGACGATGGTGCAGCTCCACTTAAGCGTCTCCAAGATGACAATGATGGTGTAGCTCCGCCTTCCTCTCTCAAAGATGAAAACAACGGTGCAACTTTACCTCTGCCTATCCAAGAAGACGACGACAGTGCATCTCTGCCTCACATATCCAAGAACATGACAATGGTGCAGCTCCACCTCTGCCTCTCTAACATGACGATGATGGTGCAACTCCCCCTTTCTAAGATGACGATGATGGTGCAACTTCGGTTTCGCTTCTCCAAAGATGACGTTGACAATGCAACTCCGCCTTCGTCTCTCTAA

Protein sequence

MTMKQLYLSLSKMTMMMQLHIYSFQDDNSGVALPPRLHDNDDGAAPLKRLQDDNDGVAPPSSLKDENNGATLPLPIQEDDDSASLPHISKNMTMVQLHLCLSNMTMMVQLPLSKMTMMVQLRFRFSKDDVDNATPPSSL
Homology
BLAST of IVF0024570 vs. ExPASy TrEMBL
Match: A0A5D3DVP6 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22G00580 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.6e-63
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0

Query: 13  MTMMMQLHIYSFQDDNSGVALPPRLHDNDDGAAPLKRLQDDNDGVAPPSSLKDENNGATL 72
           MTMMMQLHIYSFQDDNSGVALPPRLHDNDDGAAPLKRLQDDNDGVAPPSSLKDENNGATL
Sbjct: 1   MTMMMQLHIYSFQDDNSGVALPPRLHDNDDGAAPLKRLQDDNDGVAPPSSLKDENNGATL 60

Query: 73  PLPIQEDDDSASLPHISKNMTMVQLHLCLSNMTMMVQLPLSKMTMMVQLRFRFSKDDVDN 132
           PLPIQEDDDSASLPHISKNMTMVQLHLCLSNMTMMVQLPLSKMTMMVQLRFRFSKDDVDN
Sbjct: 61  PLPIQEDDDSASLPHISKNMTMVQLHLCLSNMTMMVQLPLSKMTMMVQLRFRFSKDDVDN 120

Query: 133 ATPPSSL 140
           ATPPSSL
Sbjct: 121 ATPPSSL 127

BLAST of IVF0024570 vs. ExPASy TrEMBL
Match: A0A5D3BQC5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G001570 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 3.3e-13
Identity = 47/93 (50.54%), Postives = 63/93 (67.74%), Query Frame = 0

Query: 1   MTMKQLYLSLSKMTMMMQLHIYSFQDDN--SGVALPPRLHDNDDGAAPLKRLQDDNDGVA 60
           MTMKQLYL LSKMTMMM+LH+YS QDDN        P +H  D+  APL RLQD++ GVA
Sbjct: 27  MTMKQLYLHLSKMTMMMKLHLYSPQDDNDDDNDGAAPLMHLQDNDGAPLMRLQDNDGGVA 86

Query: 61  PPSSLKDENNGATLPLPIQEDDDSASLPHISKN 92
            P SL+DE++ A L  P+Q+D+    + ++  +
Sbjct: 87  LPPSLQDEDDSAALSPPLQKDNGGGLMANVESS 119

BLAST of IVF0024570 vs. ExPASy TrEMBL
Match: A0A5A7V9J5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G001220 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.6e-12
Identity = 60/144 (41.67%), Postives = 75/144 (52.08%), Query Frame = 0

Query: 14  TMMMQLHIYSFQDDNSGVALPPRLHDNDDGAAPLKRLQDD-------------------- 73
           TMM+QL     ++D+ G  LPP LHD++D A     L+ D                    
Sbjct: 155 TMMVQL-----REDDDGATLPPPLHDDNDDATSFPHLESDDDELCLCVSKMMTMLLLCFY 214

Query: 74  ----------NDGVAPPSSLKDENNGATLPLPIQEDDDSASLPHISKNMTMVQLHLCLSN 128
                     +DG A P  L+ ++  A  PLPIQEDDD A+LP ISK    VQLHL L  
Sbjct: 215 ISKMTMLQEYDDGKARPLPLQKDDASAAPPLPIQEDDDDATLPRISKK-DKVQLHLRLFK 274

BLAST of IVF0024570 vs. ExPASy TrEMBL
Match: A0A5D3B889 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold441G00120 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.1e-12
Identity = 53/104 (50.96%), Postives = 68/104 (65.38%), Query Frame = 0

Query: 1   MTMKQLYLSLSKMTMMMQLHIYSFQDDNSGVALPPRLHDNDDGAAPLKRL---------Q 60
           MTMK+L L LSKM M++QL +YSF D ++G  LP  L D+DD  A L  L         +
Sbjct: 50  MTMKELCLHLSKMMMIVQLCLYSFHDGDNG-TLPSPLQDDDDDRAVLPLLFVKHRFRLSK 109

Query: 61  DDNDGVAPPSSLKDENNGATLPLPIQEDDDSASLPHISKNMTMV 96
           DD D  A P SL+++++G  L LPIQEDDD+A+LP ISK  TMV
Sbjct: 110 DDIDNEALPPSLQNDDDGEILSLPIQEDDDTATLPAISKKTTMV 152

BLAST of IVF0024570 vs. ExPASy TrEMBL
Match: A0A5D3BA63 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G002170 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.7e-07
Identity = 33/68 (48.53%), Postives = 49/68 (72.06%), Query Frame = 0

Query: 17 MQLHIYSFQDDNSGVALPPRLHDNDDGAAPLKRLQDDND-GVAPPSSLKDENNGATLPLP 76
          +Q+ +   + D++G ALPP L D+++G      LQDD+D GVAPP SL+DE++ ATLP P
Sbjct: 18 LQMIMVQLRKDDNGAALPPPLQDDNNGTTLSPLLQDDDDGGVAPPPSLQDEDDSATLPPP 77

Query: 77 IQEDDDSA 84
          +Q+DD +A
Sbjct: 78 LQKDDGTA 85

BLAST of IVF0024570 vs. NCBI nr
Match: KAA0054620.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK27582.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 250 bits (638), Expect = 2.54e-83
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0

Query: 13  MTMMMQLHIYSFQDDNSGVALPPRLHDNDDGAAPLKRLQDDNDGVAPPSSLKDENNGATL 72
           MTMMMQLHIYSFQDDNSGVALPPRLHDNDDGAAPLKRLQDDNDGVAPPSSLKDENNGATL
Sbjct: 1   MTMMMQLHIYSFQDDNSGVALPPRLHDNDDGAAPLKRLQDDNDGVAPPSSLKDENNGATL 60

Query: 73  PLPIQEDDDSASLPHISKNMTMVQLHLCLSNMTMMVQLPLSKMTMMVQLRFRFSKDDVDN 132
           PLPIQEDDDSASLPHISKNMTMVQLHLCLSNMTMMVQLPLSKMTMMVQLRFRFSKDDVDN
Sbjct: 61  PLPIQEDDDSASLPHISKNMTMVQLHLCLSNMTMMVQLPLSKMTMMVQLRFRFSKDDVDN 120

Query: 133 ATPPSSL 139
           ATPPSSL
Sbjct: 121 ATPPSSL 127

BLAST of IVF0024570 vs. NCBI nr
Match: KAA0052333.1 (hypothetical protein E6C27_scaffold207G001710 [Cucumis melo var. makuwa] >TYK01893.1 hypothetical protein E5676_scaffold113G001570 [Cucumis melo var. makuwa])

HSP 1 Score: 84.3 bits (207), Expect = 4.79e-17
Identity = 49/95 (51.58%), Postives = 65/95 (68.42%), Query Frame = 0

Query: 1   MTMKQLYLSLSKMTMMMQLHIYSFQDDNS----GVALPPRLHDNDDGAAPLKRLQDDNDG 60
           MTMKQLYL LSKMTMMM+LH+YS QDDN     G A  P +H  D+  APL RLQD++ G
Sbjct: 27  MTMKQLYLHLSKMTMMMKLHLYSPQDDNDDDNDGAA--PLMHLQDNDGAPLMRLQDNDGG 86

Query: 61  VAPPSSLKDENNGATLPLPIQEDDDSASLPHISKN 91
           VA P SL+DE++ A L  P+Q+D+    + ++  +
Sbjct: 87  VALPPSLQDEDDSAALSPPLQKDNGGGLMANVESS 119

BLAST of IVF0024570 vs. NCBI nr
Match: KAA0053118.1 (hypothetical protein E6C27_scaffold778G00510 [Cucumis melo var. makuwa] >TYJ95493.1 hypothetical protein E5676_scaffold441G00120 [Cucumis melo var. makuwa])

HSP 1 Score: 81.6 bits (200), Expect = 1.72e-16
Identity = 53/104 (50.96%), Postives = 68/104 (65.38%), Query Frame = 0

Query: 1   MTMKQLYLSLSKMTMMMQLHIYSFQDDNSGVALPPRLHDNDDGAAPLKRL---------Q 60
           MTMK+L L LSKM M++QL +YSF D ++G  LP  L D+DD  A L  L         +
Sbjct: 50  MTMKELCLHLSKMMMIVQLCLYSFHDGDNGT-LPSPLQDDDDDRAVLPLLFVKHRFRLSK 109

Query: 61  DDNDGVAPPSSLKDENNGATLPLPIQEDDDSASLPHISKNMTMV 95
           DD D  A P SL+++++G  L LPIQEDDD+A+LP ISK  TMV
Sbjct: 110 DDIDNEALPPSLQNDDDGEILSLPIQEDDDTATLPAISKKTTMV 152

BLAST of IVF0024570 vs. NCBI nr
Match: KAA0062545.1 (hypothetical protein E6C27_scaffold79G00200 [Cucumis melo var. makuwa] >TYK28767.1 hypothetical protein E5676_scaffold403G001220 [Cucumis melo var. makuwa])

HSP 1 Score: 82.0 bits (201), Expect = 1.72e-15
Identity = 60/144 (41.67%), Postives = 75/144 (52.08%), Query Frame = 0

Query: 14  TMMMQLHIYSFQDDNSGVALPPRLHDNDDGAAPLKRLQDDND------------------ 73
           TMM+QL     ++D+ G  LPP LHD++D A     L+ D+D                  
Sbjct: 155 TMMVQL-----REDDDGATLPPPLHDDNDDATSFPHLESDDDELCLCVSKMMTMLLLCFY 214

Query: 74  ------------GVAPPSSLKDENNGATLPLPIQEDDDSASLPHISKNMTMVQLHLCLSN 127
                       G A P  L+ ++  A  PLPIQEDDD A+LP ISK    VQLHL L  
Sbjct: 215 ISKMTMLQEYDDGKARPLPLQKDDASAAPPLPIQEDDDDATLPRISKK-DKVQLHLRLFK 274

BLAST of IVF0024570 vs. NCBI nr
Match: TYJ95909.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 65.1 bits (157), Expect = 1.30e-10
Identity = 33/68 (48.53%), Postives = 49/68 (72.06%), Query Frame = 0

Query: 17 MQLHIYSFQDDNSGVALPPRLHDNDDGAAPLKRLQDDNDG-VAPPSSLKDENNGATLPLP 76
          +Q+ +   + D++G ALPP L D+++G      LQDD+DG VAPP SL+DE++ ATLP P
Sbjct: 18 LQMIMVQLRKDDNGAALPPPLQDDNNGTTLSPLLQDDDDGGVAPPPSLQDEDDSATLPPP 77

Query: 77 IQEDDDSA 83
          +Q+DD +A
Sbjct: 78 LQKDDGTA 85

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DVP62.6e-63100.00Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A5D3BQC53.3e-1350.54Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V9J51.6e-1241.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3B8892.1e-1250.96Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BA632.7e-0748.53Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
Match NameE-valueIdentityDescription
KAA0054620.12.54e-83100.00putative mitochondrial protein [Cucumis melo var. makuwa] >TYK27582.1 putative m... [more]
KAA0052333.14.79e-1751.58hypothetical protein E6C27_scaffold207G001710 [Cucumis melo var. makuwa] >TYK018... [more]
KAA0053118.11.72e-1650.96hypothetical protein E6C27_scaffold778G00510 [Cucumis melo var. makuwa] >TYJ9549... [more]
KAA0062545.11.72e-1541.67hypothetical protein E6C27_scaffold79G00200 [Cucumis melo var. makuwa] >TYK28767... [more]
TYJ95909.11.30e-1048.53putative mitochondrial protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..85

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0024570.1IVF0024570.1mRNA