IVF0024503 (gene) Melon (IVF77) v1

Overview


Name	IVF0024503
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic
Location	tig00000662: 103537 .. 104013 (+)
RNA-Seq Expression	IVF0024503
Synteny	IVF0024503

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGGTAATTTGTCTTCTTGGCTAGTCAAACATGGACTGGTTCATAGATCTTTGGGTTTCGATTACCAAGGAATAGAGACTTTACAAATAAAGCCCGAGGAATGGCATTCCATTGCAGTCATTTTATATGTATATGGTTACAATTATCTACGTTCCCAATGTGCTTATGATGTAGCACCAGGCGGACTGTTAGCTAGTGTGTATCATCTTACGAGAATCGAGTATGGTATAGATCAACCGGAAGAGGTATGCATAAAAGTATTTGCCGCAAGGATAAATCCTAAAATTCCGTCTGTTTTCTGGGTTTGGAAAAGTGCGGATTTTCCAGAAAGGGAATCTTATGATATGTTGGGAATTTCTTATGATAATCATCCACGTCTAAAGCGTATCTTAATGCCTGAAAGTTGGGTAGGATGGCCCTTACGTAAGGATTATATTGCCCCCAATTTTTATGAAATACAAGATGCTCATTAA

mRNA sequence

ATGCAGGGTAATTTGTCTTCTTGGCTAGTCAAACATGGACTGGTTCATAGATCTTTGGGTTTCGATTACCAAGGAATAGAGACTTTACAAATAAAGCCCGAGGAATGGCATTCCATTGCAGTCATTTTATATGTATATGGTTACAATTATCTACGTTCCCAATGTGCTTATGATGTAGCACCAGGCGGACTGTTAGCTAGTGTGTATCATCTTACGAGAATCGAGTATGGTATAGATCAACCGGAAGAGGTATGCATAAAAGTATTTGCCGCAAGGATAAATCCTAAAATTCCGTCTGTTTTCTGGGTTTGGAAAAGTGCGGATTTTCCAGAAAGGGAATCTTATGATATGTTGGGAATTTCTTATGATAATCATCCACGTCTAAAGCGTATCTTAATGCCTGAAAGTTGGGTAGGATGGCCCTTACGTAAGGATTATATTGCCCCCAATTTTTATGAAATACAAGATGCTCATTAA

Coding sequence (CDS)

ATGCAGGGTAATTTGTCTTCTTGGCTAGTCAAACATGGACTGGTTCATAGATCTTTGGGTTTCGATTACCAAGGAATAGAGACTTTACAAATAAAGCCCGAGGAATGGCATTCCATTGCAGTCATTTTATATGTATATGGTTACAATTATCTACGTTCCCAATGTGCTTATGATGTAGCACCAGGCGGACTGTTAGCTAGTGTGTATCATCTTACGAGAATCGAGTATGGTATAGATCAACCGGAAGAGGTATGCATAAAAGTATTTGCCGCAAGGATAAATCCTAAAATTCCGTCTGTTTTCTGGGTTTGGAAAAGTGCGGATTTTCCAGAAAGGGAATCTTATGATATGTTGGGAATTTCTTATGATAATCATCCACGTCTAAAGCGTATCTTAATGCCTGAAAGTTGGGTAGGATGGCCCTTACGTAAGGATTATATTGCCCCCAATTTTTATGAAATACAAGATGCTCATTAA

Protein sequence

MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

Homology

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BLAST of IVF0024503 vs. ExPASy Swiss-Prot
Match: Q4VZH2 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhJ PE=3 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 2.0e-93
Identity = 156/158 (98.73%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINP+IPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 159
            YDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Sbjct: 121 YYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 158

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BLAST of IVF0024503 vs. ExPASy Swiss-Prot
Match: Q0ZJ17 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhJ PE=3 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 2.1e-90
Identity = 149/158 (94.30%), Postives = 155/158 (98.10%), Query Frame = 0


Query: 1   MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQG LS+WLVKHGLVHRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYG+DQPEEVCIKVFA+R NP+IPSVFWVWKSADF ERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGVDQPEEVCIKVFASRRNPRIPSVFWVWKSADFQERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 159
           SYDNHPRLKRILMPESW+GWPLRKDYIAPNFYEIQDAH
Sbjct: 121 SYDNHPRLKRILMPESWIGWPLRKDYIAPNFYEIQDAH 158

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BLAST of IVF0024503 vs. ExPASy Swiss-Prot
Match: B1A938 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Carica papaya OX=3649 GN=ndhJ PE=3 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 4.7e-90
Identity = 149/158 (94.30%), Postives = 154/158 (97.47%), Query Frame = 0


Query: 1   MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQG+LS WLVKHGLVHRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGHLSVWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYG+DQPEEVCIKVFA R NP+IPSVFWVWKSADF ERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGVDQPEEVCIKVFAPRSNPRIPSVFWVWKSADFQERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 159
           SYDNHPRLKRILMPESW+GWPLRKDYIAPNFYEIQDAH
Sbjct: 121 SYDNHPRLKRILMPESWIGWPLRKDYIAPNFYEIQDAH 158

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BLAST of IVF0024503 vs. ExPASy Swiss-Prot
Match: B5LML3 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Cicer arietinum OX=3827 GN=ndhJ PE=3 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 1.1e-89
Identity = 147/158 (93.04%), Postives = 154/158 (97.47%), Query Frame = 0


Query: 1   MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGNLS+WLVKHG+VHRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGNLSAWLVKHGIVHRSLGFDYQGIETLQIKPEDWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEY +DQPEEVCIKVFA R NP+IPS+FWVWKSADF ERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYSLDQPEEVCIKVFAPRKNPRIPSIFWVWKSADFQERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 159
           SYDNHPRLKRILMPESW+GWPLRKDYIAPNFYEIQDAH
Sbjct: 121 SYDNHPRLKRILMPESWIGWPLRKDYIAPNFYEIQDAH 158

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BLAST of IVF0024503 vs. ExPASy Swiss-Prot
Match: P31174 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Glycine max OX=3847 GN=ndhJ PE=2 SV=2)

HSP 1 Score: 329.7 bits (844), Expect = 1.8e-89
Identity = 145/158 (91.77%), Postives = 154/158 (97.47%), Query Frame = 0


Query: 1   MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQG LSSWLVKHGL+HRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGRLSSWLVKHGLIHRSLGFDYQGIETLQIKPEDWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTR+EYGIDQPEEVCIK+F AR NP+IPS+FWVWKSADF E+ESYDMLGI
Sbjct: 61  PGGLLASVYHLTRLEYGIDQPEEVCIKIFVARKNPRIPSIFWVWKSADFQEKESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 159
           SYDNHPRL+RILMPESW+GWPLRKDYIAPNFYEIQDAH
Sbjct: 121 SYDNHPRLRRILMPESWIGWPLRKDYIAPNFYEIQDAH 158

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BLAST of IVF0024503 vs. ExPASy TrEMBL
Match: A0A1S4EU07 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Cucumis melo OX=3656 GN=ndhJ PE=3 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 6.8e-92
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 159
           SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Sbjct: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 158

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BLAST of IVF0024503 vs. ExPASy TrEMBL
Match: A0A249RZ69 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658 GN=ndhJ PE=3 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 6.8e-92
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 159
           SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Sbjct: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 158

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BLAST of IVF0024503 vs. ExPASy TrEMBL
Match: A0A249RXS5 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Cucumis melo subsp. agrestis OX=217619 GN=ndhJ PE=3 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 6.8e-92
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 159
           SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Sbjct: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 158

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BLAST of IVF0024503 vs. ExPASy TrEMBL
Match: A0A286NFY1 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Cucumis melo var. flexuosus OX=1120798 GN=ndhJ PE=3 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 6.8e-92
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 159
           SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Sbjct: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 158

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BLAST of IVF0024503 vs. ExPASy TrEMBL
Match: A0A249RZ18 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Cucumis melo var. dudaim OX=2034236 GN=ndhJ PE=3 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 6.8e-92
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 159
           SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Sbjct: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 158

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BLAST of IVF0024503 vs. NCBI nr
Match: YP_004841786.1 (NADH-plastoquinone oxidoreductase subunit J [Cucumis melo subsp. melo] >YP_009860076.1 NADH-plastoquinone oxidoreductase subunit J [Cucumis melo subsp. agrestis] >ASY96587.1 NADH dehydrogenase subunit J [Cucumis melo var. conomon] >ASY96674.1 NADH dehydrogenase subunit J [Cucumis melo var. makuwa] >ASY96761.1 NADH dehydrogenase subunit J [Cucumis melo var. momordica] >ASY96848.1 NADH dehydrogenase subunit J [Cucumis melo var. dudaim] >ASY96935.1 NADH dehydrogenase subunit J [Cucumis melo var. cantalupo] >ASY97109.1 NADH dehydrogenase subunit J [Cucumis melo var. inodorus] >ASY97283.1 NADH dehydrogenase subunit J [Cucumis melo var. flexuosus] >QJF46386.1 NADH-plastoquinone oxidoreductase subunit J [Cucumis melo])

HSP 1 Score: 342 bits (876), Expect = 7.94e-119
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 158
           SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Sbjct: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 158

[Close]

BLAST of IVF0024503 vs. NCBI nr
Match: YP_009236283.1 (NADH-plastoquinone oxidoreductase subunit J [Gynostemma pentaphyllum] >YP_009317389.1 NADH dehydrogenase subunit J [Coccinia grandis] >YP_009420797.1 NADH dehydrogenase subunit J [Citrullus colocynthis] >YP_009430630.1 NADH dehydrogenase subunit J [Gynostemma cardiospermum] >YP_009431645.1 NADH dehydrogenase subunit J [Citrullus rehmii] >YP_009439807.1 NADH dehydrogenase subunit J [Gynostemma laxiflorum] >YP_009439894.1 NADH dehydrogenase subunit J [Gynostemma caulopterum] >YP_009440160.1 NADH dehydrogenase subunit J [Gynostemma longipes] >YP_009440247.1 NADH dehydrogenase subunit J [Gynostemma burmanicum (nom. inval.)] >YP_009440334.1 NADH dehydrogenase subunit J [Gynostemma pubescens] >YP_009447453.1 NADH dehydrogenase subunit J [Cucurbita maxima] >YP_009447538.1 NADH dehydrogenase subunit J [Cucurbita moschata] >YP_009456064.1 NADH dehydrogenase subunit J [Momordica charantia] >YP_009456149.1 NADH dehydrogenase subunit J [Lagenaria siceraria] >YP_009468864.1 NADH dehydrogenase subunit J [Gynostemma compressum] >YP_009505083.1 NADH dehydrogenase subunit J [Cucurbita pepo] >YP_009751825.1 NADH dehydrogenase subunit J [Indofevillea khasiana] >YP_009751993.1 NADH dehydrogenase subunit J [Cionosicys macranthus] >YP_009752078.1 NADH dehydrogenase subunit J [Dendrosicyos socotranus] >YP_009752669.1 NADH dehydrogenase subunit J [Ampelosycios humblotii] >YP_009752753.1 NADH dehydrogenase subunit J [Cyclantheropsis parviflora] >YP_009752838.1 NADH dehydrogenase subunit J [Baijiania yunnanensis] >YP_009753007.1 NADH dehydrogenase subunit J [Gerrardanthus macrorhizus] >YP_009753092.1 NADH dehydrogenase subunit J [Corallocarpus boehmii] >YP_009753261.1 NADH dehydrogenase subunit J [Nothoalsomitra suberosa] >YP_010015142.1 NADH dehydrogenase subunit J [Gynostemma yixingense] >YP_010131097.1 NADH-plastoquinone oxidoreductase subunit J [Benincasa hispida] >ALO21769.1 NdhJ [Cucurbita argyrosperma] >ALO21826.1 NdhJ [Cucurbita argyrosperma var. palmeri] >ALO21847.1 NdhJ [Cucurbita argyrosperma subsp. sororia] >ALO22065.1 NdhJ [Cucurbita ecuadorensis] >ALO22136.1 NdhJ [Cucurbita ficifolia] >ALO22158.1 NdhJ [Cucurbita foetidissima] >ALO22241.1 NdhJ [Cucurbita lundelliana] >ALO22331.1 NdhJ [Cucurbita maxima subsp. andreana] >ALO22449.1 NdhJ [Cucurbita okeechobeensis] >ALO22487.1 NdhJ [Cucurbita okeechobeensis subsp. martinezii] >ALO22587.1 NdhJ [Cucurbita pepo subsp. fraterna] >ALO22650.1 NdhJ [Cucurbita pepo subsp. ovifera] >ALO22728.1 NdhJ [Cucurbita pepo var. ozarkana] >ALO22760.1 NdhJ [Cucurbita pepo subsp. pepo] >ALO22812.1 NdhJ [Cucurbita pepo var. texana] >ALO22928.1 NdhJ [Cucurbita pedatifolia] >QNM38534.1 NADH-plastoquinone oxidoreductase subunit J [Lagenaria siceraria var. microcarpa] >QZL38596.1 NADH dehydrogenase subunit J [Citrullus naudinianus] >QZL38684.1 NADH dehydrogenase subunit J [Citrullus ecirrhosus])

HSP 1 Score: 338 bits (868), Expect = 1.32e-117
Identity = 156/158 (98.73%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQG+LSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINP+IPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 158
           SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Sbjct: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 158

[Close]

BLAST of IVF0024503 vs. NCBI nr
Match: YP_009525189.1 (NADH-plastoquinone oxidoreductase subunit J [Hodgsonia macrocarpa] >YP_009560838.1 NdhJ [Trichosanthes kirilowii] >YP_009751656.1 NADH dehydrogenase subunit J [Hodgsonia heteroclita] >YP_009752246.1 NADH dehydrogenase subunit J [Trichosanthes baviensis] >YP_009752415.1 NADH dehydrogenase subunit J [Trichosanthes tricuspidata] >YP_009753623.1 NADH dehydrogenase subunit J [Trichosanthes wallichiana] >YP_009753708.1 NADH dehydrogenase subunit J [Trichosanthes nervifolia] >YP_009753792.1 NADH dehydrogenase subunit J [Trichosanthes pilosa] >YP_009753877.1 NADH dehydrogenase subunit J [Trichosanthes lobata] >AXR94527.1 NADH-plastoquinone oxidoreductase subunit J [Hodgsonia macrocarpa] >AXR94613.1 NADH-plastoquinone oxidoreductase subunit J [Hodgsonia macrocarpa] >AXR94697.1 NADH-plastoquinone oxidoreductase subunit J [Hodgsonia macrocarpa] >AXR94782.1 NADH-plastoquinone oxidoreductase subunit J [Hodgsonia macrocarpa] >QAB33193.1 NdhJ [Trichosanthes kirilowii])

HSP 1 Score: 338 bits (867), Expect = 1.87e-117
Identity = 156/158 (98.73%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQG LSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGRLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINP+IPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 158
           SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Sbjct: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 158

[Close]

BLAST of IVF0024503 vs. NCBI nr
Match: YP_009004047.1 (NADH-plastoquinone oxidoreductase subunit J [Cucumis hystrix] >YP_247602.1 NADH dehydrogenase subunit J [Cucumis sativus] >Q4VZH2.1 RecName: Full=NAD(P)H-quinone oxidoreductase subunit J, chloroplastic; AltName: Full=NAD(P)H dehydrogenase subunit J; AltName: Full=NADH-plastoquinone oxidoreductase subunit J [Cucumis sativus] >ALF03304.1 NADH dehydrogenase subunit J [Cucumis sativus var. hardwickii] >AVE15334.1 NdhJ [Cucumis sativus var. sativus] >AAZ94654.1 NADH dehydrogenase 19 kDa subunit [Cucumis sativus] >ABI97420.1 NADH-plastoquinone oxidoreductase subunit J [Cucumis sativus] >ABI98749.1 NADH-plastoquinone oxidoreductase subunit J [Cucumis sativus])

HSP 1 Score: 338 bits (867), Expect = 1.87e-117
Identity = 156/158 (98.73%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINP+IPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 158
            YDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Sbjct: 121 YYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 158

[Close]

BLAST of IVF0024503 vs. NCBI nr
Match: ALO21898.1 (NdhJ [Cucurbita cordata] >ALO21971.1 NdhJ [Cucurbita digitata])

HSP 1 Score: 338 bits (866), Expect = 2.66e-117
Identity = 155/158 (98.10%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQG+LSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINP+IPSVFWVWKSADFPERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 158
           SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYE+QDAH
Sbjct: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYELQDAH 158

[Close]

BLAST of IVF0024503 vs. TAIR 10
Match: ATCG00420.1 (NADH dehydrogenase subunit J )

HSP 1 Score: 312.8 bits (800), Expect = 1.6e-85
Identity = 140/158 (88.61%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 1   MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVA 60
           MQG LS WL K GLVHRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVA
Sbjct: 1   MQGTLSVWLAKRGLVHRSLGFDYQGIETLQIKPEDWHSIAVILYVYGYNYLRSQCAYDVA 60

Query: 61  PGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFPERESYDMLGI 120
           PGGLLASVYHLTRIEYG++Q EEVCIKVF  R NP+IPSVFWVWKS DF ERESYDMLGI
Sbjct: 61  PGGLLASVYHLTRIEYGVNQAEEVCIKVFTHRSNPRIPSVFWVWKSTDFQERESYDMLGI 120

Query: 121 SYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 159
           +YD+HPRLKRILMPESW+GWPLRKDYIAPNFYEIQDA+
Sbjct: 121 TYDSHPRLKRILMPESWIGWPLRKDYIAPNFYEIQDAY 158

[Close]

BLAST of IVF0024503 vs. TAIR 10
Match: ATMG00070.1 (NADH dehydrogenase subunit 9 )

HSP 1 Score: 49.3 bits (116), Expect = 3.3e-06
Identity = 30/96 (31.25%), Postives = 45/96 (46.88%), Query Frame = 0


Query: 77  GIDQPE-----EVCIKVFAARIN------------PKIPSVFWVWKSADFPERESYDMLG 136
           G+D P      EV   + + R N             +I  V  ++ SA   ERE +DM G
Sbjct: 61  GVDHPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSAGRWEREVWDMFG 120

Query: 137 ISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQ 156
           +S+ NHP L+RI     + G PLRKD     + +++
Sbjct: 121 VSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVQVR 156

The following BLAST results are available for this feature:

BLAST of IVF0024503 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZH2	2.0e-93	98.73	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Cucumis sativus OX=36...	[more]
Q0ZJ17	2.1e-90	94.30	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Vitis vinifera OX=297...	[more]
B1A938	4.7e-90	94.30	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Carica papaya OX=3649...	[more]
B5LML3	1.1e-89	93.04	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Cicer arietinum OX=38...	[more]
P31174	1.8e-89	91.77	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Glycine max OX=3847 G...	[more]

BLAST of IVF0024503 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4EU07	6.8e-92	100.00	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Cucumis melo OX=3656 ...	[more]
A0A249RZ69	6.8e-92	100.00	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Cucumis melo var. can...	[more]
A0A249RXS5	6.8e-92	100.00	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Cucumis melo subsp. a...	[more]
A0A286NFY1	6.8e-92	100.00	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Cucumis melo var. fle...	[more]
A0A249RZ18	6.8e-92	100.00	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Cucumis melo var. dud...	[more]

BLAST of IVF0024503 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_004841786.1	7.94e-119	100.00	NADH-plastoquinone oxidoreductase subunit J [Cucumis melo subsp. melo] >YP_00986...	[more]
YP_009236283.1	1.32e-117	98.73	NADH-plastoquinone oxidoreductase subunit J [Gynostemma pentaphyllum] >YP_009317...	[more]
YP_009525189.1	1.87e-117	98.73	NADH-plastoquinone oxidoreductase subunit J [Hodgsonia macrocarpa] >YP_009560838...	[more]
YP_009004047.1	1.87e-117	98.73	NADH-plastoquinone oxidoreductase subunit J [Cucumis hystrix] >YP_247602.1 NADH ...	[more]
ALO21898.1	2.66e-117	98.10	NdhJ [Cucurbita cordata] >ALO21971.1 NdhJ [Cucurbita digitata]	[more]

BLAST of IVF0024503 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00420.1	1.6e-85	88.61	NADH dehydrogenase subunit J	[more]
ATMG00070.1	3.3e-06	31.25	NADH dehydrogenase subunit 9	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001268	NADH:ubiquinone oxidoreductase, 30kDa subunit	PFAM	PF00329	Complex1_30kDa	coord: 30..148 e-value: 4.1E-32 score: 111.3
IPR037232	NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily	GENE3D	3.30.460.80	NADH:ubiquinone oxidoreductase, 30kDa subunit	coord: 15..130 e-value: 4.1E-24 score: 87.5
IPR037232	NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily	SUPERFAMILY	143243	Nqo5-like	coord: 5..154
None	No IPR available	PANTHER	PTHR10884:SF18	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT J, CHLOROPLASTIC	coord: 53..158
None	No IPR available	PANTHER	PTHR10884	NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 3	coord: 53..158
IPR020396	NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site	PROSITE	PS00542	COMPLEX1_30K	coord: 111..132
IPR010218	NADH dehydrogenase, subunit C	HAMAP	MF_01357	NDH1_NuoC	coord: 1..158 score: 25.400858

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0024503.1	IVF0024503.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0019684	photosynthesis, light reaction
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0048038	quinone binding
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H