Homology
BLAST of IVF0024485 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 444.1 bits (1141), Expect = 4.8e-123
Identity = 365/1317 (27.71%), Postives = 597/1317 (45.33%), Query Frame = 0
Query: 17 FDGDN-YQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMARIKAQKEKKTKKSKAKA 76
F+GDN + W RM + + + ++ D + P +KA+ + +A +
Sbjct: 11 FNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKP--------DTMKAE-DWADLDERAAS 70
Query: 77 CLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESI 136
+ +S + I+ +A IW L+S Y L L ++ M E +
Sbjct: 71 AIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTL---TNKLYLKKQLYALHMSEGTNF 130
Query: 137 KEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEIL 196
+ + Q+ LG ++ +L S+P ++ + + + K T I L ++
Sbjct: 131 LSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGK--TTIELKDVT 190
Query: 197 NALQAQEQRRAMRQEGAVEGALPAKHHKNVRNNKKKKFFKKNQISTREFSTYNKAGVKKG 256
+AL E+ MR++ +G + + + + + + R + K
Sbjct: 191 SALLLNEK---MRKKPENQG------QALITEGRGRSYQRSSNNYGRSGARGKSKNRSKS 250
Query: 257 SYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHE-----AVICRNNNQQQDVEAKIAYQ 316
C +CN+ GH C PN + K G + A + +NN+ + +
Sbjct: 251 RVRNCYNCNQPGHFKRDC---PNPRKGKGETSGQKNDDNTAAMVQNNDN------VVLFI 310
Query: 317 EEEEDQLFVVTCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITKVIIGNGDYISV 376
EEE+ C W++D+ ++H T ++LF + V +GN Y +
Sbjct: 311 NEEEE------CMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKI 370
Query: 377 KGKGTIAIASCKG-TKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENE--------YCL 436
G G I I + G T ++DV VPD+ NL+S L G++ F N+ +
Sbjct: 371 AGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVI 430
Query: 437 IKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTELA 496
K A +++ + LN ++E SV LWHKR+GH +GL L + +
Sbjct: 431 AKGVARGTLYRTNAEICQGELNAAQDEISV--------DLWHKRMGHMSEKGLQILAKKS 490
Query: 497 LDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVA--------------- 556
L + C C FGKQ+R SF SS R L L+++DV
Sbjct: 491 LISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFV 550
Query: 557 ------------------------------------------------------------ 616
Sbjct: 551 TFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYC 610
Query: 617 ---GIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTTVFLQNRL 676
GI+H+ T P TPQ NGV+ER NR I+E R ML LPK FW EA T +L NR
Sbjct: 611 SSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRS 670
Query: 677 PTKALKEKTPFEAW-------------------------------RASPGVFIGYSSISK 736
P+ L + P W ++ P +FIGY
Sbjct: 671 PSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEF 730
Query: 737 AYKIFQPQTGKIIVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSS----------- 796
Y+++ P K+I SRDV F E E D +K + F S+
Sbjct: 731 GYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNGIIPNFVTIPSTSNNPTSAESTT 790
Query: 797 --IEEEDDRQNEIVD-----DASVRGT-------------------RLLSDIYERCNVAV 856
+ E+ ++ E+++ D V R+ S Y +
Sbjct: 791 DEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRYPSTEYVL 850
Query: 857 CEPANYAEAKKD-------QRWIAAMEEELSMIEKNKTWILVDRPQDRKVIGVKWVFRTK 916
E+ K+ + + AM+EE+ ++KN T+ LV+ P+ ++ + KWVF+ K
Sbjct: 851 ISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLK 910
Query: 917 LNADGSINKHKARLVVKGYAQIFGVDYSDNFAPVARMDTIRLLFAIAAQKGWKLYQLDVK 976
+ D + ++KARLVVKG+ Q G+D+ + F+PV +M +IR + ++AA ++ QLDVK
Sbjct: 911 KDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVK 970
Query: 977 SAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFL 1036
+AFL+G L+EEIY+EQPEG E G+++ V L K+LYGLKQAPR WY K D + S +L
Sbjct: 971 TAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYL 1030
Query: 1037 KSLTESTLYVKH-NGTSILIVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSYF 1096
K+ ++ +Y K + + +I+ LYVDD+L+ G + I K ++ K F+M DLG
Sbjct: 1031 KTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQI 1090
Query: 1097 LGIEI--KQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMDQKEKLCKEDGADKVDEG- 1156
LG++I ++ ++++ Q+KY + +L++F M K VSTP+ KL K+ V+E
Sbjct: 1091 LGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKG 1150
BLAST of IVF0024485 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 426.8 bits (1096), Expect = 7.9e-118
Identity = 368/1407 (26.15%), Postives = 602/1407 (42.79%), Query Frame = 0
Query: 21 NYQVWAVRMEAYMEALDIWEAVEEDYEI-PALPDNPTMARIKAQKEKKTKKSK-AKACLF 80
NY +W+ ++ A + ++ ++ + PA R+ + ++ K + +
Sbjct: 30 NYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRWKRQDKLIYSAVL 89
Query: 81 AAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESIKEY 140
A+S ++ + +A +IW L+ Y ++ ++++ K T++I +Y
Sbjct: 90 GAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQW----TKGTKTIDDY 149
Query: 141 SVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEILNAL 200
L+ +Q+ LLG VE++L ++PE+++ I + KD T TL EI L
Sbjct: 150 MQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIA-AKD-TPPTLTEIHERL 209
Query: 201 QAQEQR-RAMRQEGAVEGALPAKHHKN-VRNNKKKKFFKKNQISTREFSTYNKAGVKKGS 260
E + A+ + A H+N N + N+ R + +K
Sbjct: 210 LNHESKILAVSSATVIPITANAVSHRNTTTTNNNNNGNRNNRYDNRNNNNNSK------- 269
Query: 261 YPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQQDVEAKIAYQEEEED- 320
P + HP + KC C GH A C +Q Q + + Q+
Sbjct: 270 --PWQQSSTNFHPNNNQSKPYLGKCQICGVQGHSAKRC---SQLQHFLSSVNSQQPPSPF 329
Query: 321 ---QLFVVTCFVGGESNESWLIDSGCTNHMTHDKELFKDLKP-TNITKVIIGNGDYISVK 380
Q S+ +WL+DSG T+H+T D +P T V++ +G I +
Sbjct: 330 TPWQPRANLALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPIS 389
Query: 381 GKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIE-KGFKVTFENEYCLIKDA-ANQD 440
G+ ++++ ++ ++L+VP+I++NL+SV +L G V F +KD
Sbjct: 390 HTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVP 449
Query: 441 IFKVKMKGKSFSLNPLEEEQ--SVFALKEDET--QLWHKRVGHYHHQGLLQ-LTELALDF 500
+ + K K + + P+ Q S+FA + WH R+GH L ++ +L
Sbjct: 450 LLQGKTKDELYEW-PIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSV 509
Query: 501 PKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDV------------------- 560
S + SC C K N+ F +S+ +T+ L+ I++DV
Sbjct: 510 LNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWSSPILSHDNYRYYVIFVD 569
Query: 561 --------------------------------------------------------AGIK 620
GI
Sbjct: 570 HFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVALWEYFSQHGIS 629
Query: 621 HQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTTVFLQNRLPTKALK 680
H + P+TP+ NG+SER++R+I+E +L S+PK +W A V+L NRLPT L+
Sbjct: 630 HLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQ 689
Query: 681 EKTPFE-AWRASPG------------------------------VFIGYSSISKAYKIFQ 740
++PF+ + SP VF+GYS AY
Sbjct: 690 LESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLH 749
Query: 741 PQTGKIIVSRDVHFEED---------------EE-------WN----------------- 800
QT ++ +SR V F+E+ E+ W+
Sbjct: 750 LQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPTRTPVLPAPSC 809
Query: 801 ----------------FDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN------------- 860
F +++ L+ F SS E RQN
Sbjct: 810 SDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQT 869
Query: 861 ------------------------------------------------------------ 920
Sbjct: 870 QTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPP 929
Query: 921 ---EIVD-------DASVRGTRLLSDIYE---RCNVAV-----CEPANYAEAKKDQRWIA 980
+IV+ + GTR + I + + ++AV EP +A KD+RW
Sbjct: 930 PLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRN 989
Query: 981 AMEEELSMIEKNKTWILVDRPQDR-KVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIF 1040
AM E++ N TW LV P ++G +W+F K N+DGS+N++KARLV KGY Q
Sbjct: 990 AMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRP 1049
Query: 1041 GVDYSDNFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQ 1100
G+DY++ F+PV + +IR++ +A + W + QLDV +AFL G L +++Y+ QP G +
Sbjct: 1050 GLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDK 1109
Query: 1101 GERNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLTESTLYVKHNGTSILIVSLY 1159
N V L+KALYGLKQAPRAWY ++ +LL++GF+ S+++++L+V G SI+ + +Y
Sbjct: 1110 DRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVY 1169
BLAST of IVF0024485 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 393.3 bits (1009), Expect = 9.7e-108
Identity = 355/1416 (25.07%), Postives = 578/1416 (40.82%), Query Frame = 0
Query: 21 NYQVWAVRMEAYMEALDIWEAVEEDYEI-PALPDNPTMARIKAQKEKKTKKSK-AKACLF 80
NY +W+ ++ A + ++ ++ + PA + R+ + ++ K + +
Sbjct: 30 NYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRVNPDYTRWRRQDKLIYSAIL 89
Query: 81 AAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESIKEY 140
A+S ++ + +A +IW L+ Y + + L I F+
Sbjct: 90 GAISMSVQPAVSRATTAAQIWETLRKIY-ANPSYGHVTQLRFITRFD------------- 149
Query: 141 SVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEILNAL 200
Q+ LLG VE++L ++P+ ++ I + KD T +L EI L
Sbjct: 150 ---------QLALLGKPMDHDEQVERVLENLPDDYKPVIDQIA-AKD-TPPSLTEIHERL 209
Query: 201 QAQEQR-RAMRQEGAVEGALPAKHHKNVRNNKKKKFFKKNQISTREFSTYNKAGVKKGSY 260
+E + A+ V H+N N +NQ + + YN + S+
Sbjct: 210 INRESKLLALNSAEVVPITANVVTHRNTNTN-------RNQNNRGDNRNYNNNNNRSNSW 269
Query: 261 PPCSHCNKQGHPPFKCWRRPN---AKCTKCNQMGHEAVIC-------RNNNQQQDVEAKI 320
P S ++ + R+P +C C+ GH A C NQQQ
Sbjct: 270 QPSSSGSRSDN------RQPKPYLGRCQICSVQGHSAKRCPQLHQFQSTTNQQQSTSPFT 329
Query: 321 AYQEEEEDQLFVVTCFVGGESNESWLIDSGCTNHMTHDKELFKDLKP-TNITKVIIGNGD 380
+Q L V + + + +WL+DSG T+H+T D +P T V+I +G
Sbjct: 330 PWQPRA--NLAVNSPY----NANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGS 389
Query: 381 YISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKG-FKVTFENEYCLIKDA 440
I + G+ ++ + + + VL+VP+I++NL+SV +L V F +KD
Sbjct: 390 TIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDL 449
Query: 441 -ANQDIFKVKMKGKSFSLNPLEEEQ--SVFA--LKEDETQLWHKRVGHYHHQGLLQ-LTE 500
+ + K K + + P+ Q S+FA + WH R+GH L ++
Sbjct: 450 NTGVPLLQGKTKDELYEW-PIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVISN 509
Query: 501 LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDV-------------- 560
+L S ++ SC C K ++ F S+ +++ L+ I++DV
Sbjct: 510 HSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWSSPILSIDNYRYY 569
Query: 561 ------------------------------------------------------------ 620
Sbjct: 570 VIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRDYLS 629
Query: 621 -AGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTTVFLQNRLP 680
GI H + P+TP+ NG+SER++R+I+EM +L S+PK +W A + V+L NRLP
Sbjct: 630 QHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLP 689
Query: 681 TKALKEKTPFEAWRASPG-------------------------------VFIGYSSISKA 740
T L+ ++PF+ P F+GYS A
Sbjct: 690 TPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSA 749
Query: 741 YKIFQPQTGKIIVSRDVHFEE--------------DEEWNFDDAEKKGQ----------- 800
Y TG++ SR V F+E +E D A
Sbjct: 750 YLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPTTPLVL 809
Query: 801 ------------------------TLEKMKFKFFDSSIEE-------------------- 860
T + SSI
Sbjct: 810 PAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQPTAQP 869
Query: 861 -----------------------EDDRQNEIVDDASV----------------------- 920
QN + + +
Sbjct: 870 HQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSST 929
Query: 921 ---------------------------RGTRLLSDI--------YERCNVAVCEPANYAE 980
TR I Y A EP +
Sbjct: 930 STPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAANSEPRTAIQ 989
Query: 981 AKKDQRWIAAMEEELSMIEKNKTWILVDRPQDR-KVIGVKWVFRTKLNADGSINKHKARL 1040
A KD RW AM E++ N TW LV P ++G +W+F K N+DGS+N++KARL
Sbjct: 990 AMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARL 1049
Query: 1041 VVKGYAQIFGVDYSDNFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYV 1100
V KGY Q G+DY++ F+PV + +IR++ +A + W + QLDV +AFL G L +E+Y+
Sbjct: 1050 VAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYM 1109
Query: 1101 EQPEGCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLTESTLYVKHNG 1159
QP G + + V L+KA+YGLKQAPRAWY ++ +LL++GF+ S+++++L+V G
Sbjct: 1110 SQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRG 1169
BLAST of IVF0024485 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 344.0 bits (881), Expect = 6.7e-93
Identity = 247/798 (30.95%), Postives = 377/798 (47.24%), Query Frame = 0
Query: 527 GIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTTVFLQNRLPTK 586
GI + LT P+TPQ NGVSER R I E R M+ L K FW EA T +L NR+P++
Sbjct: 568 GISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSR 627
Query: 587 AL--KEKTPFEAW------------------------------RASPGVFIGYSSISKAY 646
AL KTP+E W ++ +F+GY +
Sbjct: 628 ALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDKSFKSIFVGYE--PNGF 687
Query: 647 KIFQPQTGKIIVSRD-------------VHFE---------------------------- 706
K++ K IV+RD V FE
Sbjct: 688 KLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFP 747
Query: 707 ----------------EDEEWNF-DDAEKKGQT------------------LEKMKFKFF 766
E E NF +D+ K QT E K+
Sbjct: 748 NESKECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLN 807
Query: 767 DSSIEEEDDRQNE-----------------------IVDDASVRGTRLLSDIYER----- 826
+S + DD NE I + G +++ ER
Sbjct: 808 ESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKP 867
Query: 827 ----------CNVAVCE--------PANYAEAK-KDQR--WIAAMEEELSMIEKNKTWIL 886
N V P ++ E + +D + W A+ EL+ + N TW +
Sbjct: 868 QISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTI 927
Query: 887 VDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDNFAPVARMDTIR 946
RP+++ ++ +WVF K N G+ ++KARLV +G+ Q + +DY + FAPVAR+ + R
Sbjct: 928 TKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFR 987
Query: 947 LLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQ 1006
+ ++ Q K++Q+DVK+AFLNG L+EEIY+ P+G + V L KA+YGLKQ
Sbjct: 988 FILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGISCNSD--NVCKLNKAIYGLKQ 1047
Query: 1007 APRAWYSKIDEHLLSLGFLKSLTESTLYV--KHNGTSILIVSLYVDDLLVTGNNADHIQN 1066
A R W+ ++ L F+ S + +Y+ K N + V LYVDD+++ + + N
Sbjct: 1048 AARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNN 1107
Query: 1067 FKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMD 1126
FK +M+ F MTDL + +F+GI I+ + ++++ Q Y K+IL KF M+ C AVSTP+
Sbjct: 1108 FKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLP 1167
Query: 1127 QK---EKLCKEDGADKVDEGYFRSLIGCLMY-LTGTRPDILNAVSILSRFMHCASELHLK 1159
K E L ++ + RSLIGCLMY + TRPD+ AV+ILSR+ + +
Sbjct: 1168 SKINYELLNSDEDCNTP----CRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQ 1227
BLAST of IVF0024485 vs. ExPASy Swiss-Prot
Match:
P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)
HSP 1 Score: 164.9 bits (416), Expect = 5.6e-39
Identity = 100/304 (32.89%), Postives = 161/304 (52.96%), Query Frame = 0
Query: 805 LDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHLLS 864
+DV +AFLN + E IYV+QP G + + V+ L +YGLKQAP W I+ L
Sbjct: 1 MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60
Query: 865 LGFLKSLTESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLM 924
+GF + E LY + + +++YVDDLLV + K E+ K++ M DLG +
Sbjct: 61 IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120
Query: 925 SYFLGIEIKQ-GQGEVFICQKKYAKEILKKFKMDECKAVSTPMDQKEKLCKEDGADKVDE 984
FLG+ I Q G++ + + Y + + +++ K TP+ + L + D
Sbjct: 121 DKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDI 180
Query: 985 GYFRSLIGCLMYLTGT-RPDILNAVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKF 1044
++S++G L++ T RPDI VS+LSRF+ +HL++A+RV+RY+ T +K+
Sbjct: 181 TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKY 240
Query: 1045 TRGKEFKLISFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKK-QEIVSQSTAEAEFIA 1104
G + L + D+ G D ST GY L+ +WSSKK + ++ + EAE+I
Sbjct: 241 RSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAEYIT 300
Query: 1105 ATAT 1106
A+ T
Sbjct: 301 ASET 304
BLAST of IVF0024485 vs. ExPASy TrEMBL
Match:
A0A5A7VC09 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold977G00080 PE=4 SV=1)
HSP 1 Score: 2279.2 bits (5905), Expect = 0.0e+00
Identity = 1158/1209 (95.78%), Postives = 1158/1209 (95.78%), Query Frame = 0
Query: 1 MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMARI 60
MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMARI
Sbjct: 1 MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMARI 60
Query: 61 KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120
KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 61 KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120
Query: 121 IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180
IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 121 IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180
Query: 181 ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHKNVRNNKKKKFFKKNQIS 240
ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHKNVRNNKKKKFFKKNQIS
Sbjct: 181 ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHKNVRNNKKKKFFKKNQIS 240
Query: 241 TREFSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300
TREFSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 241 TREFSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300
Query: 301 QDVEAKIAYQEEEEDQLFVVTCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITKV 360
QDVEAKIAYQEEEEDQLFVVTCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITKV
Sbjct: 301 QDVEAKIAYQEEEEDQLFVVTCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITKV 360
Query: 361 IIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEYC 420
IIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEYC
Sbjct: 361 IIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEYC 420
Query: 421 LIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTEL 480
LIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTEL
Sbjct: 421 LIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTEL 480
Query: 481 ALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVA-------------- 540
ALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVA
Sbjct: 481 ALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTTSLKGSLYY 540
Query: 541 -------------------------------------GIKHQLTAPYTPQQNGVSERRNR 600
GIKHQLTAPYTPQQNGVSERRNR
Sbjct: 541 IAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGIKHQLTAPYTPQQNGVSERRNR 600
Query: 601 YIMEMTRCMLHEKSLPKKFWAEAANTTVFLQNRLPTKALKEKTPFEAWRASPGVFIGYSS 660
YIMEMTRCMLHEKSLPKKFWAEAANTTVFLQNRLPTKALKEKTPFEAWRASPGVFIGYSS
Sbjct: 601 YIMEMTRCMLHEKSLPKKFWAEAANTTVFLQNRLPTKALKEKTPFEAWRASPGVFIGYSS 660
Query: 661 ISKAYKIFQPQTGKIIVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQ 720
ISKAYKIFQPQTGKIIVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQ
Sbjct: 661 ISKAYKIFQPQTGKIIVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQ 720
Query: 721 NEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWIL 780
NEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWIL
Sbjct: 721 NEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWIL 780
Query: 781 VDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDNFAPVARMDTIR 840
VDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDNFAPVARMDTIR
Sbjct: 781 VDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDNFAPVARMDTIR 840
Query: 841 LLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQ 900
LLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQ
Sbjct: 841 LLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQ 900
Query: 901 APRAWYSKIDEHLLSLGFLKSLTESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFK 960
APRAWYSKIDEHLLSLGFLKSLTESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFK
Sbjct: 901 APRAWYSKIDEHLLSLGFLKSLTESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFK 960
Query: 961 WEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMDQK 1020
WEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMDQK
Sbjct: 961 WEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMDQK 1020
Query: 1021 EKLCKEDGADKVDEGYFRSLIGCLMYLTGTRPDILNAVSILSRFMHCASELHLKAAKRVI 1080
EKLCKEDGADKVDEGYFRSLIGCLMYLTGTRPDILNAVSILSRFMHCASELHLKAAKRVI
Sbjct: 1021 EKLCKEDGADKVDEGYFRSLIGCLMYLTGTRPDILNAVSILSRFMHCASELHLKAAKRVI 1080
Query: 1081 RYVKGTSDFGVKFTRGKEFKLISFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEI 1140
RYVKGTSDFGVKFTRGKEFKLISFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEI
Sbjct: 1081 RYVKGTSDFGVKFTRGKEFKLISFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEI 1140
Query: 1141 VSQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKT 1159
VSQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKT
Sbjct: 1141 VSQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKT 1200
BLAST of IVF0024485 vs. ExPASy TrEMBL
Match:
A0A5D3DMJ1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G00670 PE=4 SV=1)
HSP 1 Score: 2220.7 bits (5753), Expect = 0.0e+00
Identity = 1143/1268 (90.14%), Postives = 1150/1268 (90.69%), Query Frame = 0
Query: 1 MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMARI 60
MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMA+I
Sbjct: 1 MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60
Query: 61 KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120
KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 61 KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120
Query: 121 IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180
IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 121 IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180
Query: 181 ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHKNVRNNKKKKFFKKNQIS 240
ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHH+NVRNNKKKKFFKKNQIS
Sbjct: 181 ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240
Query: 241 TREFSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300
TRE STYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 241 TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300
Query: 301 QDVEAKIAYQ-EEEEDQLFVVTCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360
Q VEAKIAYQ EEEEDQLFV TCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 301 QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360
Query: 361 VIIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420
V IGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY
Sbjct: 361 VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420
Query: 421 CLIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480
CLIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 421 CLIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480
Query: 481 LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVA------------- 540
LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVA
Sbjct: 481 LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540
Query: 541 ------------------------------------------------------------ 600
Sbjct: 541 YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600
Query: 601 -----GIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTTVFLQN 660
GIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANT VFLQN
Sbjct: 601 FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660
Query: 661 RLPTKALKEKTPFEAW-------------------------------RASPGVFIGYSSI 720
RLPTKALKEKTPFEAW RASPGVFIGYSSI
Sbjct: 661 RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720
Query: 721 SKAYKIFQPQTGKIIVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780
SKAYKIFQPQTGKI+VSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN
Sbjct: 721 SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780
Query: 781 EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840
EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 781 EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840
Query: 841 DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDNFAPVARMDTIRL 900
DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSD FAPVARMDTIRL
Sbjct: 841 DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900
Query: 901 LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960
LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 901 LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960
Query: 961 PRAWYSKIDEHLLSLGFLKSLTESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKW 1020
PRAWYSKIDEHLLSLGFLKSL+ESTLYVKHNGT+ILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 961 PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020
Query: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMDQKE 1080
EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPM+QKE
Sbjct: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080
Query: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTGTRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140
KLCKEDGADKVDEGYFRSLIGCLMYLT TRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140
Query: 1141 YVKGTSDFGVKFTRGKEFKLISFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1159
YVKGTSDFGVKFTRGKEFKLI FSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200
BLAST of IVF0024485 vs. ExPASy TrEMBL
Match:
A0A5D3DBU0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00950 PE=4 SV=1)
HSP 1 Score: 2220.7 bits (5753), Expect = 0.0e+00
Identity = 1143/1268 (90.14%), Postives = 1150/1268 (90.69%), Query Frame = 0
Query: 1 MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMARI 60
MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMA+I
Sbjct: 117 MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 176
Query: 61 KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120
KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 177 KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 236
Query: 121 IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180
IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 237 IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 296
Query: 181 ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHKNVRNNKKKKFFKKNQIS 240
ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHH+NVRNNKKKKFFKKNQIS
Sbjct: 297 ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 356
Query: 241 TREFSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300
TRE STYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 357 TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 416
Query: 301 QDVEAKIAYQ-EEEEDQLFVVTCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360
Q VEAKIAYQ EEEEDQLFV TCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 417 QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 476
Query: 361 VIIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420
V IGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY
Sbjct: 477 VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 536
Query: 421 CLIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480
CLIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 537 CLIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 596
Query: 481 LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVA------------- 540
LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVA
Sbjct: 597 LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 656
Query: 541 ------------------------------------------------------------ 600
Sbjct: 657 YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 716
Query: 601 -----GIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTTVFLQN 660
GIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANT VFLQN
Sbjct: 717 FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 776
Query: 661 RLPTKALKEKTPFEAW-------------------------------RASPGVFIGYSSI 720
RLPTKALKEKTPFEAW RASPGVFIGYSSI
Sbjct: 777 RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 836
Query: 721 SKAYKIFQPQTGKIIVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780
SKAYKIFQPQTGKI+VSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN
Sbjct: 837 SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 896
Query: 781 EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840
EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 897 EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 956
Query: 841 DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDNFAPVARMDTIRL 900
DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSD FAPVARMDTIRL
Sbjct: 957 DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 1016
Query: 901 LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960
LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 1017 LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 1076
Query: 961 PRAWYSKIDEHLLSLGFLKSLTESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKW 1020
PRAWYSKIDEHLLSLGFLKSL+ESTLYVKHNGT+ILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 1077 PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1136
Query: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMDQKE 1080
EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPM+QKE
Sbjct: 1137 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1196
Query: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTGTRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140
KLCKEDGADKVDEGYFRSLIGCLMYLT TRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1197 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1256
Query: 1141 YVKGTSDFGVKFTRGKEFKLISFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1159
YVKGTSDFGVKFTRGKEFKLI FSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1257 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1316
BLAST of IVF0024485 vs. ExPASy TrEMBL
Match:
A0A5D3E2V7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00370 PE=4 SV=1)
HSP 1 Score: 2219.1 bits (5749), Expect = 0.0e+00
Identity = 1142/1268 (90.06%), Postives = 1150/1268 (90.69%), Query Frame = 0
Query: 1 MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMARI 60
MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMA+I
Sbjct: 1 MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60
Query: 61 KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120
KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 61 KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120
Query: 121 IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180
IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 121 IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180
Query: 181 ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHKNVRNNKKKKFFKKNQIS 240
ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHH+NVRNNKKKKFFKKNQIS
Sbjct: 181 ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240
Query: 241 TREFSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300
TRE STYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 241 TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300
Query: 301 QDVEAKIAYQ-EEEEDQLFVVTCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360
Q VEAKIAYQ EEEEDQLFV TCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 301 QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360
Query: 361 VIIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420
V IGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY
Sbjct: 361 VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420
Query: 421 CLIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480
CLIKDAANQDIFKVKMKGKSFSLNPLEE+QSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 421 CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480
Query: 481 LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVA------------- 540
LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVA
Sbjct: 481 LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540
Query: 541 ------------------------------------------------------------ 600
Sbjct: 541 YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600
Query: 601 -----GIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTTVFLQN 660
GIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANT VFLQN
Sbjct: 601 FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660
Query: 661 RLPTKALKEKTPFEAW-------------------------------RASPGVFIGYSSI 720
RLPTKALKEKTPFEAW RASPGVFIGYSSI
Sbjct: 661 RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720
Query: 721 SKAYKIFQPQTGKIIVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780
SKAYKIFQPQTGKI+VSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN
Sbjct: 721 SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780
Query: 781 EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840
EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 781 EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840
Query: 841 DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDNFAPVARMDTIRL 900
DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSD FAPVARMDTIRL
Sbjct: 841 DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900
Query: 901 LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960
LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 901 LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960
Query: 961 PRAWYSKIDEHLLSLGFLKSLTESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKW 1020
PRAWYSKIDEHLLSLGFLKSL+ESTLYVKHNGT+ILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 961 PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020
Query: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMDQKE 1080
EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPM+QKE
Sbjct: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080
Query: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTGTRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140
KLCKEDGADKVDEGYFRSLIGCLMYLT TRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140
Query: 1141 YVKGTSDFGVKFTRGKEFKLISFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1159
YVKGTSDFGVKFTRGKEFKLI FSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200
BLAST of IVF0024485 vs. ExPASy TrEMBL
Match:
A0A5D3BL45 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00490 PE=4 SV=1)
HSP 1 Score: 2219.1 bits (5749), Expect = 0.0e+00
Identity = 1142/1268 (90.06%), Postives = 1150/1268 (90.69%), Query Frame = 0
Query: 1 MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMARI 60
MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMA+I
Sbjct: 620 MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 679
Query: 61 KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120
KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 680 KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 739
Query: 121 IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180
IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 740 IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 799
Query: 181 ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHKNVRNNKKKKFFKKNQIS 240
ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHH+NVRNNKKKKFFKKNQIS
Sbjct: 800 ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 859
Query: 241 TREFSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300
TRE STYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 860 TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 919
Query: 301 QDVEAKIAYQ-EEEEDQLFVVTCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360
Q VEAKIAYQ EEEEDQLFV TCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 920 QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 979
Query: 361 VIIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420
V IGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY
Sbjct: 980 VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 1039
Query: 421 CLIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480
CLIKDAANQDIFKVKMKGKSFSLNPLEE+QSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 1040 CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 1099
Query: 481 LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVA------------- 540
LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVA
Sbjct: 1100 LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 1159
Query: 541 ------------------------------------------------------------ 600
Sbjct: 1160 YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 1219
Query: 601 -----GIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTTVFLQN 660
GIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANT VFLQN
Sbjct: 1220 FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 1279
Query: 661 RLPTKALKEKTPFEAW-------------------------------RASPGVFIGYSSI 720
RLPTKALKEKTPFEAW RASPGVFIGYSSI
Sbjct: 1280 RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 1339
Query: 721 SKAYKIFQPQTGKIIVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780
SKAYKIFQPQTGKI+VSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN
Sbjct: 1340 SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 1399
Query: 781 EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840
EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 1400 EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 1459
Query: 841 DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDNFAPVARMDTIRL 900
DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSD FAPVARMDTIRL
Sbjct: 1460 DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 1519
Query: 901 LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960
LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 1520 LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 1579
Query: 961 PRAWYSKIDEHLLSLGFLKSLTESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKW 1020
PRAWYSKIDEHLLSLGFLKSL+ESTLYVKHNGT+ILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 1580 PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1639
Query: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMDQKE 1080
EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPM+QKE
Sbjct: 1640 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1699
Query: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTGTRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140
KLCKEDGADKVDEGYFRSLIGCLMYLT TRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1700 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1759
Query: 1141 YVKGTSDFGVKFTRGKEFKLISFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1159
YVKGTSDFGVKFTRGKEFKLI FSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1760 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1819
BLAST of IVF0024485 vs. NCBI nr
Match:
KAA0063435.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 2273 bits (5889), Expect = 0.0
Identity = 1158/1209 (95.78%), Postives = 1158/1209 (95.78%), Query Frame = 0
Query: 1 MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMARI 60
MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMARI
Sbjct: 1 MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMARI 60
Query: 61 KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120
KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 61 KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120
Query: 121 IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180
IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 121 IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180
Query: 181 ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHKNVRNNKKKKFFKKNQIS 240
ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHKNVRNNKKKKFFKKNQIS
Sbjct: 181 ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHKNVRNNKKKKFFKKNQIS 240
Query: 241 TREFSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300
TREFSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 241 TREFSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300
Query: 301 QDVEAKIAYQEEEEDQLFVVTCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITKV 360
QDVEAKIAYQEEEEDQLFVVTCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITKV
Sbjct: 301 QDVEAKIAYQEEEEDQLFVVTCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITKV 360
Query: 361 IIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEYC 420
IIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEYC
Sbjct: 361 IIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEYC 420
Query: 421 LIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTEL 480
LIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTEL
Sbjct: 421 LIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTEL 480
Query: 481 ALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAG------------- 540
ALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAG
Sbjct: 481 ALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTTSLKGSLYY 540
Query: 541 --------------------------------------IKHQLTAPYTPQQNGVSERRNR 600
IKHQLTAPYTPQQNGVSERRNR
Sbjct: 541 IAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGIKHQLTAPYTPQQNGVSERRNR 600
Query: 601 YIMEMTRCMLHEKSLPKKFWAEAANTTVFLQNRLPTKALKEKTPFEAWRASPGVFIGYSS 660
YIMEMTRCMLHEKSLPKKFWAEAANTTVFLQNRLPTKALKEKTPFEAWRASPGVFIGYSS
Sbjct: 601 YIMEMTRCMLHEKSLPKKFWAEAANTTVFLQNRLPTKALKEKTPFEAWRASPGVFIGYSS 660
Query: 661 ISKAYKIFQPQTGKIIVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQ 720
ISKAYKIFQPQTGKIIVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQ
Sbjct: 661 ISKAYKIFQPQTGKIIVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQ 720
Query: 721 NEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWIL 780
NEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWIL
Sbjct: 721 NEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWIL 780
Query: 781 VDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDNFAPVARMDTIR 840
VDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDNFAPVARMDTIR
Sbjct: 781 VDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDNFAPVARMDTIR 840
Query: 841 LLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQ 900
LLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQ
Sbjct: 841 LLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQ 900
Query: 901 APRAWYSKIDEHLLSLGFLKSLTESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFK 960
APRAWYSKIDEHLLSLGFLKSLTESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFK
Sbjct: 901 APRAWYSKIDEHLLSLGFLKSLTESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFK 960
Query: 961 WEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMDQK 1020
WEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMDQK
Sbjct: 961 WEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMDQK 1020
Query: 1021 EKLCKEDGADKVDEGYFRSLIGCLMYLTGTRPDILNAVSILSRFMHCASELHLKAAKRVI 1080
EKLCKEDGADKVDEGYFRSLIGCLMYLTGTRPDILNAVSILSRFMHCASELHLKAAKRVI
Sbjct: 1021 EKLCKEDGADKVDEGYFRSLIGCLMYLTGTRPDILNAVSILSRFMHCASELHLKAAKRVI 1080
Query: 1081 RYVKGTSDFGVKFTRGKEFKLISFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEI 1140
RYVKGTSDFGVKFTRGKEFKLISFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEI
Sbjct: 1081 RYVKGTSDFGVKFTRGKEFKLISFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEI 1140
Query: 1141 VSQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKT 1158
VSQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKT
Sbjct: 1141 VSQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKT 1200
BLAST of IVF0024485 vs. NCBI nr
Match:
TYJ95793.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK04080.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK07482.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK23562.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK24808.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 2214 bits (5737), Expect = 0.0
Identity = 1143/1268 (90.14%), Postives = 1150/1268 (90.69%), Query Frame = 0
Query: 1 MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMARI 60
MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMA+I
Sbjct: 1 MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60
Query: 61 KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120
KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 61 KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120
Query: 121 IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180
IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 121 IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180
Query: 181 ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHKNVRNNKKKKFFKKNQIS 240
ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHH+NVRNNKKKKFFKKNQIS
Sbjct: 181 ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240
Query: 241 TREFSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300
TRE STYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 241 TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300
Query: 301 QDVEAKIAYQEEEE-DQLFVVTCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360
Q VEAKIAYQEEEE DQLFV TCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 301 QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360
Query: 361 VIIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420
V IGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY
Sbjct: 361 VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420
Query: 421 CLIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480
CLIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 421 CLIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480
Query: 481 LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAG------------ 540
LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAG
Sbjct: 481 LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540
Query: 541 ------------------------------------------------------------ 600
Sbjct: 541 YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600
Query: 601 ------IKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTTVFLQN 660
IKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANT VFLQN
Sbjct: 601 FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660
Query: 661 RLPTKALKEKTPFEAW-------------------------------RASPGVFIGYSSI 720
RLPTKALKEKTPFEAW RASPGVFIGYSSI
Sbjct: 661 RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720
Query: 721 SKAYKIFQPQTGKIIVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780
SKAYKIFQPQTGKI+VSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN
Sbjct: 721 SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780
Query: 781 EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840
EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 781 EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840
Query: 841 DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDNFAPVARMDTIRL 900
DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSD FAPVARMDTIRL
Sbjct: 841 DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900
Query: 901 LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960
LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 901 LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960
Query: 961 PRAWYSKIDEHLLSLGFLKSLTESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKW 1020
PRAWYSKIDEHLLSLGFLKSL+ESTLYVKHNGT+ILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 961 PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020
Query: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMDQKE 1080
EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPM+QKE
Sbjct: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080
Query: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTGTRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140
KLCKEDGADKVDEGYFRSLIGCLMYLT TRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140
Query: 1141 YVKGTSDFGVKFTRGKEFKLISFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1158
YVKGTSDFGVKFTRGKEFKLI FSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200
BLAST of IVF0024485 vs. NCBI nr
Match:
TYK21117.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 2214 bits (5737), Expect = 0.0
Identity = 1143/1268 (90.14%), Postives = 1150/1268 (90.69%), Query Frame = 0
Query: 1 MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMARI 60
MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMA+I
Sbjct: 117 MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 176
Query: 61 KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120
KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 177 KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 236
Query: 121 IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180
IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 237 IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 296
Query: 181 ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHKNVRNNKKKKFFKKNQIS 240
ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHH+NVRNNKKKKFFKKNQIS
Sbjct: 297 ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 356
Query: 241 TREFSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300
TRE STYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 357 TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 416
Query: 301 QDVEAKIAYQEEEE-DQLFVVTCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360
Q VEAKIAYQEEEE DQLFV TCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 417 QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 476
Query: 361 VIIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420
V IGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY
Sbjct: 477 VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 536
Query: 421 CLIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480
CLIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 537 CLIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 596
Query: 481 LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAG------------ 540
LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAG
Sbjct: 597 LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 656
Query: 541 ------------------------------------------------------------ 600
Sbjct: 657 YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 716
Query: 601 ------IKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTTVFLQN 660
IKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANT VFLQN
Sbjct: 717 FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 776
Query: 661 RLPTKALKEKTPFEAW-------------------------------RASPGVFIGYSSI 720
RLPTKALKEKTPFEAW RASPGVFIGYSSI
Sbjct: 777 RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 836
Query: 721 SKAYKIFQPQTGKIIVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780
SKAYKIFQPQTGKI+VSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN
Sbjct: 837 SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 896
Query: 781 EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840
EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 897 EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 956
Query: 841 DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDNFAPVARMDTIRL 900
DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSD FAPVARMDTIRL
Sbjct: 957 DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 1016
Query: 901 LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960
LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 1017 LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 1076
Query: 961 PRAWYSKIDEHLLSLGFLKSLTESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKW 1020
PRAWYSKIDEHLLSLGFLKSL+ESTLYVKHNGT+ILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 1077 PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1136
Query: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMDQKE 1080
EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPM+QKE
Sbjct: 1137 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1196
Query: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTGTRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140
KLCKEDGADKVDEGYFRSLIGCLMYLT TRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1197 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1256
Query: 1141 YVKGTSDFGVKFTRGKEFKLISFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1158
YVKGTSDFGVKFTRGKEFKLI FSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1257 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1316
BLAST of IVF0024485 vs. NCBI nr
Match:
TYK00004.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 2212 bits (5733), Expect = 0.0
Identity = 1142/1268 (90.06%), Postives = 1150/1268 (90.69%), Query Frame = 0
Query: 1 MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMARI 60
MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMA+I
Sbjct: 620 MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 679
Query: 61 KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120
KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 680 KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 739
Query: 121 IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180
IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 740 IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 799
Query: 181 ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHKNVRNNKKKKFFKKNQIS 240
ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHH+NVRNNKKKKFFKKNQIS
Sbjct: 800 ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 859
Query: 241 TREFSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300
TRE STYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 860 TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 919
Query: 301 QDVEAKIAYQEEEE-DQLFVVTCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360
Q VEAKIAYQEEEE DQLFV TCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 920 QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 979
Query: 361 VIIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420
V IGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY
Sbjct: 980 VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 1039
Query: 421 CLIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480
CLIKDAANQDIFKVKMKGKSFSLNPLEE+QSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 1040 CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 1099
Query: 481 LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAG------------ 540
LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAG
Sbjct: 1100 LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 1159
Query: 541 ------------------------------------------------------------ 600
Sbjct: 1160 YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 1219
Query: 601 ------IKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTTVFLQN 660
IKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANT VFLQN
Sbjct: 1220 FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 1279
Query: 661 RLPTKALKEKTPFEAW-------------------------------RASPGVFIGYSSI 720
RLPTKALKEKTPFEAW RASPGVFIGYSSI
Sbjct: 1280 RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 1339
Query: 721 SKAYKIFQPQTGKIIVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780
SKAYKIFQPQTGKI+VSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN
Sbjct: 1340 SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 1399
Query: 781 EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840
EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 1400 EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 1459
Query: 841 DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDNFAPVARMDTIRL 900
DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSD FAPVARMDTIRL
Sbjct: 1460 DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 1519
Query: 901 LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960
LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 1520 LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 1579
Query: 961 PRAWYSKIDEHLLSLGFLKSLTESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKW 1020
PRAWYSKIDEHLLSLGFLKSL+ESTLYVKHNGT+ILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 1580 PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1639
Query: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMDQKE 1080
EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPM+QKE
Sbjct: 1640 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1699
Query: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTGTRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140
KLCKEDGADKVDEGYFRSLIGCLMYLT TRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1700 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1759
Query: 1141 YVKGTSDFGVKFTRGKEFKLISFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1158
YVKGTSDFGVKFTRGKEFKLI FSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1760 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1819
BLAST of IVF0024485 vs. NCBI nr
Match:
KAA0025843.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 2212 bits (5733), Expect = 0.0
Identity = 1142/1268 (90.06%), Postives = 1150/1268 (90.69%), Query Frame = 0
Query: 1 MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMARI 60
MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMA+I
Sbjct: 1 MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60
Query: 61 KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120
KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 61 KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120
Query: 121 IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180
IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 121 IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180
Query: 181 ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHKNVRNNKKKKFFKKNQIS 240
ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHH+NVRNNKKKKFFKKNQIS
Sbjct: 181 ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240
Query: 241 TREFSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300
TRE STYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 241 TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300
Query: 301 QDVEAKIAYQEEEE-DQLFVVTCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360
Q VEAKIAYQEEEE DQLFV TCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 301 QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360
Query: 361 VIIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420
V IGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY
Sbjct: 361 VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420
Query: 421 CLIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480
CLIKDAANQDIFKVKMKGKSFSLNPLEE+QSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 421 CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480
Query: 481 LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAG------------ 540
LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAG
Sbjct: 481 LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540
Query: 541 ------------------------------------------------------------ 600
Sbjct: 541 YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600
Query: 601 ------IKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTTVFLQN 660
IKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANT VFLQN
Sbjct: 601 FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660
Query: 661 RLPTKALKEKTPFEAW-------------------------------RASPGVFIGYSSI 720
RLPTKALKEKTPFEAW RASPGVFIGYSSI
Sbjct: 661 RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720
Query: 721 SKAYKIFQPQTGKIIVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780
SKAYKIFQPQTGKI+VSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN
Sbjct: 721 SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780
Query: 781 EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840
EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 781 EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840
Query: 841 DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDNFAPVARMDTIRL 900
DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSD FAPVARMDTIRL
Sbjct: 841 DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900
Query: 901 LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960
LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 901 LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960
Query: 961 PRAWYSKIDEHLLSLGFLKSLTESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKW 1020
PRAWYSKIDEHLLSLGFLKSL+ESTLYVKHNGT+ILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 961 PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020
Query: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMDQKE 1080
EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPM+QKE
Sbjct: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080
Query: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTGTRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140
KLCKEDGADKVDEGYFRSLIGCLMYLT TRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140
Query: 1141 YVKGTSDFGVKFTRGKEFKLISFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1158
YVKGTSDFGVKFTRGKEFKLI FSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200
BLAST of IVF0024485 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 356.7 bits (914), Expect = 7.1e-98
Identity = 188/465 (40.43%), Postives = 282/465 (60.65%), Query Frame = 0
Query: 691 CNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLN 750
C EP+ Y EAK+ W AM++E+ +E TW + P ++K IG KWV++ K N
Sbjct: 79 CIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYN 138
Query: 751 ADGSINKHKARLVVKGYAQIFGVDYSDNFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSA 810
+DG+I ++KARLV KGY Q G+D+ + F+PV ++ +++L+ AI+A + L+QLD+ +A
Sbjct: 139 SDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNA 198
Query: 811 FLNGVLQEEIYVEQPEG-CEKQGER---NKVYLLKKALYGLKQAPRAWYSKIDEHLLSLG 870
FLNG L EEIY++ P G +QG+ N V LKK++YGLKQA R W+ K L+ G
Sbjct: 199 FLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFG 258
Query: 871 FLKSLTESTLYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSY 930
F++S ++ T ++K T L V +YVDD+++ NN + K ++ F++ DLG + Y
Sbjct: 259 FVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKY 318
Query: 931 FLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMDQKEKLCKEDGADKVDEGYF 990
FLG+EI + + ICQ+KYA ++L + + CK S PMD G D VD +
Sbjct: 319 FLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAY 378
Query: 991 RSLIGCLMYLTGTRPDILNAVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGK 1050
R LIG LMYL TR DI AV+ LS+F H +A +++ Y+KGT G+ ++
Sbjct: 379 RRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQA 438
Query: 1051 EFKLISFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIVSQSTAEAEFIAATATA 1110
E +L FSD+ + D RST GYC L + + SW SKKQ++VS+S+AEAE+ A +
Sbjct: 439 EMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFAT 498
Query: 1111 NQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKH 1152
++ +WL + +L L K T + DN AAI I+ N VF+++TKH
Sbjct: 499 DEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKH 543
BLAST of IVF0024485 vs. TAIR 10
Match:
ATMG00810.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 159.5 bits (402), Expect = 1.7e-38
Identity = 90/222 (40.54%), Postives = 127/222 (57.21%), Query Frame = 0
Query: 890 LYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKE 949
LYVDD+L+TG++ + +++ F M DLG + YFLGI+IK +F+ Q KYA++
Sbjct: 5 LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64
Query: 950 ILKKFKMDECKAVSTPMDQKEKLCKEDGADKVDEGYFRSLIGCLMYLTGTRPDILNAVSI 1009
IL M +CK +STP+ K A D FRS++G L YLT TRPDI AV+I
Sbjct: 65 ILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNI 124
Query: 1010 LSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLISFSDSDWGGSIDDMRSTL 1069
+ + MH + KRV+RYVKGT G+ + + + +F DSDW G RST
Sbjct: 125 VCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTT 184
Query: 1070 GYCFTLSSGVFSWSSKKQEIVSQSTAEAEFIAATATANQALW 1112
G+C L + SWS+K+Q VS+S+ E E+ A TA + W
Sbjct: 185 GFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
BLAST of IVF0024485 vs. TAIR 10
Match:
ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )
HSP 1 Score: 101.3 bits (251), Expect = 5.4e-21
Identity = 46/101 (45.54%), Postives = 69/101 (68.32%), Query Frame = 0
Query: 697 EPANYAEAKKDQRWIAAMEEELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSIN 756
EP + A KD W AM+EEL + +NKTWILV P ++ ++G KWVF+TKL++DG+++
Sbjct: 27 EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86
Query: 757 KHKARLVVKGYAQIFGVDYSDNFAPVARMDTIRLLFAIAAQ 798
+ KARLV KG+ Q G+ + + ++PV R TIR + +A Q
Sbjct: 87 RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQ 127
BLAST of IVF0024485 vs. TAIR 10
Match:
AT3G21000.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 68.2 bits (165), Expect = 5.1e-11
Identity = 83/412 (20.15%), Postives = 169/412 (41.02%), Query Frame = 0
Query: 15 LIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPD-NPTMA------RIKAQKEKK 74
++ D +Y++WA ++ + +W+ V +P P NP +A + ++
Sbjct: 10 VVSDQFDYEIWAPITKSTLIEQGLWDVVVNG--VPQDPSKNPELAATIQPEELSKWRDFV 69
Query: 75 TKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLK--SEYEGDERIKGMRVLNLIREFE 134
K +KA L ++++ ++F + ++ SA ++W+ L+ +E R++ + + L ++ E
Sbjct: 70 VKDAKALQILQSSLTDSVFRKTLSASSAKDVWDLLRKGNEQATIRRLEQVTIRRLEKQLE 129
Query: 135 LQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISALENTKD 194
KM + ES Y + L+I ++ D I + + ++ F+ S LE D
Sbjct: 130 DLKMVDKESGSSYLDKALEILERLGRAKLEKSDYEICKNVFTTLSGSFDGLDSMLEELID 189
Query: 195 LTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHKNVRNNKKKKFFKKNQISTRE-- 254
+ ++T ++ +++ ++ ST E
Sbjct: 190 VHKMTSKSLVEYF----------------------------------YYRVHESSTEEAI 249
Query: 255 FSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQQDV 314
F +K S C C K H C R + ++++
Sbjct: 250 FGLLKDLRLKSKSEKWCGLCYKNNHNQEDCKFR-----------------IHTDKEEKED 309
Query: 315 EAKIAYQEEEEDQLFVVTCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITKVIIG 374
E + Y+ E L T ++ W+I +MT + F L T V
Sbjct: 310 EIVVDYRLETVPNLGAKT-----YDDDIWIIHKMAPINMTPYVKYFTTLDRTFKATVGTV 363
Query: 375 NGDYISVKGKGTIAIASCKGTKH-IQDVLFVPDINQNLLSVGQLIEKGFKVT 415
+G + V+GKG + I +G K I++V+FVP +N+N+LS G+++ K + ++
Sbjct: 370 DGTVLLVEGKGDVKIRMKEGKKKTIRNVIFVPGLNRNVLSFGKMVSKRYSIS 363
BLAST of IVF0024485 vs. TAIR 10
Match:
ATMG00240.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 65.9 bits (159), Expect = 2.5e-10
Identity = 32/79 (40.51%), Postives = 48/79 (60.76%), Query Frame = 0
Query: 994 MYLTGTRPDILNAVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLISF 1053
MYLT TRPD+ AV+ LS+F + ++A +V+ YVKGT G+ ++ + +L +F
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 1054 SDSDWGGSIDDMRSTLGYC 1073
+DSDW D RS G+C
Sbjct: 61 ADSDWASCPDTRRSVTGFC 79
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P10978 | 4.8e-123 | 27.71 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
Q94HW2 | 7.9e-118 | 26.15 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 9.7e-108 | 25.07 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
P04146 | 6.7e-93 | 30.95 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
P25600 | 5.6e-39 | 32.89 | Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7VC09 | 0.0e+00 | 95.78 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5D3DMJ1 | 0.0e+00 | 90.14 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5D3DBU0 | 0.0e+00 | 90.14 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5D3E2V7 | 0.0e+00 | 90.06 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5D3BL45 | 0.0e+00 | 90.06 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
Match Name | E-value | Identity | Description | |
KAA0063435.1 | 0.0 | 95.78 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
TYJ95793.1 | 0.0 | 90.14 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
TYK21117.1 | 0.0 | 90.14 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
TYK00004.1 | 0.0 | 90.06 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
KAA0025843.1 | 0.0 | 90.06 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |