IVF0024467 (gene) Melon (IVF77) v1

Overview
NameIVF0024467
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionADP-ribosylation factor
Locationchr04: 15884710 .. 15884877 (-)
RNA-Seq ExpressionIVF0024467
SyntenyIVF0024467
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATTGACCTTCACCAAGCACTTCAGTAGGCTTTTTGCCAAGAAGGAGATGCAAATTTTGATGATTGGTCTTGATGCTGCTGGAAAGACCACGATTTTGAACAAGCTCAAGCTCGGAGAAATTGTCACAACTATTCCTACGATTGGTGTGTTCTTTCATTACTAA

mRNA sequence

ATGGGATTGACCTTCACCAAGCACTTCAGTAGGCTTTTTGCCAAGAAGGAGATGCAAATTTTGATGATTGGTCTTGATGCTGCTGGAAAGACCACGATTTTGAACAAGCTCAAGCTCGGAGAAATTGTCACAACTATTCCTACGATTGGTGTGTTCTTTCATTACTAA

Coding sequence (CDS)

ATGGGATTGACCTTCACCAAGCACTTCAGTAGGCTTTTTGCCAAGAAGGAGATGCAAATTTTGATGATTGGTCTTGATGCTGCTGGAAAGACCACGATTTTGAACAAGCTCAAGCTCGGAGAAATTGTCACAACTATTCCTACGATTGGTGTGTTCTTTCATTACTAA

Protein sequence

MGLTFTKHFSRLFAKKEMQILMIGLDAAGKTTILNKLKLGEIVTTIPTIGVFFHY
Homology
BLAST of IVF0024467 vs. ExPASy Swiss-Prot
Match: Q06396 (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0813400 PE=2 SV=3)

HSP 1 Score: 90.5 bits (223), Expect = 6.4e-18
Identity = 46/50 (92.00%), Postives = 48/50 (96.00%), Query Frame = 0

Query: 1  MGLTFTKHFSRLFAKKEMQILMIGLDAAGKTTILNKLKLGEIVTTIPTIG 51
          MGLTFTK FSRLFAKKEM+ILM+GLDAAGKTTIL KLKLGEIVTTIPTIG
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

BLAST of IVF0024467 vs. ExPASy Swiss-Prot
Match: P51823 (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF PE=2 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 6.4e-18
Identity = 46/50 (92.00%), Postives = 48/50 (96.00%), Query Frame = 0

Query: 1  MGLTFTKHFSRLFAKKEMQILMIGLDAAGKTTILNKLKLGEIVTTIPTIG 51
          MGLTFTK FSRLFAKKEM+ILM+GLDAAGKTTIL KLKLGEIVTTIPTIG
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

BLAST of IVF0024467 vs. ExPASy Swiss-Prot
Match: P49076 (ADP-ribosylation factor OS=Zea mays OX=4577 GN=ARF1 PE=2 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 6.4e-18
Identity = 46/50 (92.00%), Postives = 48/50 (96.00%), Query Frame = 0

Query: 1  MGLTFTKHFSRLFAKKEMQILMIGLDAAGKTTILNKLKLGEIVTTIPTIG 51
          MGLTFTK FSRLFAKKEM+ILM+GLDAAGKTTIL KLKLGEIVTTIPTIG
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

BLAST of IVF0024467 vs. ExPASy Swiss-Prot
Match: P51822 (ADP-ribosylation factor 1 OS=Daucus carota OX=4039 GN=ARF1 PE=2 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 1.9e-17
Identity = 45/50 (90.00%), Postives = 48/50 (96.00%), Query Frame = 0

Query: 1  MGLTFTKHFSRLFAKKEMQILMIGLDAAGKTTILNKLKLGEIVTTIPTIG 51
          MGL+FTK FSRLFAKKEM+ILM+GLDAAGKTTIL KLKLGEIVTTIPTIG
Sbjct: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

BLAST of IVF0024467 vs. ExPASy Swiss-Prot
Match: O48920 (ADP-ribosylation factor OS=Vigna unguiculata OX=3917 GN=ARF PE=2 SV=3)

HSP 1 Score: 89.0 bits (219), Expect = 1.9e-17
Identity = 45/50 (90.00%), Postives = 48/50 (96.00%), Query Frame = 0

Query: 1  MGLTFTKHFSRLFAKKEMQILMIGLDAAGKTTILNKLKLGEIVTTIPTIG 51
          MGL+FTK FSRLFAKKEM+ILM+GLDAAGKTTIL KLKLGEIVTTIPTIG
Sbjct: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

BLAST of IVF0024467 vs. ExPASy TrEMBL
Match: A0A5D3C085 (ADP-ribosylation factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001420 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.7e-21
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0

Query: 1  MGLTFTKHFSRLFAKKEMQILMIGLDAAGKTTILNKLKLGEIVTTIPTIGVFFHY 56
          MGLTFTKHFSRLFAKKEMQILMIGLDAAGKTTILNKLKLGEIVTTIPTIGVFFHY
Sbjct: 1  MGLTFTKHFSRLFAKKEMQILMIGLDAAGKTTILNKLKLGEIVTTIPTIGVFFHY 55

BLAST of IVF0024467 vs. ExPASy TrEMBL
Match: A0A6A4QLW6 (Putative small GTPase superfamily, ARF/SAR type, P-loop containing nucleoside triphosphate hydrolase OS=Lupinus albus OX=3870 GN=Lalb_Chr05g0228261 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.5e-17
Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 0

Query: 1  MGLTFTKHFSRLFAKKEMQILMIGLDAAGKTTILNKLKLGEIVTTIPTIGVFFHY 56
          MGLTFTK FSRLFAKKEM+ILM+GLDAAGKTTIL KLKLGEIVTTIPTIG FFH+
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGKFFHF 55

BLAST of IVF0024467 vs. ExPASy TrEMBL
Match: A0A5D3CPT1 (ADP-ribosylation factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold179G00030 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.5e-17
Identity = 48/55 (87.27%), Postives = 52/55 (94.55%), Query Frame = 0

Query: 1  MGLTFTKHFSRLFAKKEMQILMIGLDAAGKTTILNKLKLGEIVTTIPTIGVFFHY 56
          MGLTFTK F+RLFAKKEMQILM+GLDAAGKTTIL KLKLGEI+TTIPT+GVFF Y
Sbjct: 1  MGLTFTKLFTRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIITTIPTMGVFFDY 55

BLAST of IVF0024467 vs. ExPASy TrEMBL
Match: A0A2P2LC40 (Putative adp-ribosylation factor 2 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.5e-17
Identity = 49/54 (90.74%), Postives = 51/54 (94.44%), Query Frame = 0

Query: 1  MGLTFTKHFSRLFAKKEMQILMIGLDAAGKTTILNKLKLGEIVTTIPTIGVFFH 55
          MGLTFTK FSRLFAKKEM+ILM+GLDAAGKTTIL KLKLGEIVTTIPTIG FFH
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGKFFH 54

BLAST of IVF0024467 vs. ExPASy TrEMBL
Match: A0A6A4NZK4 (Putative small GTPase superfamily, ARF/SAR type, P-loop containing nucleoside triphosphate hydrolase OS=Lupinus albus OX=3870 GN=Lalb_Chr16g0392341 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 7.3e-17
Identity = 48/55 (87.27%), Postives = 51/55 (92.73%), Query Frame = 0

Query: 1  MGLTFTKHFSRLFAKKEMQILMIGLDAAGKTTILNKLKLGEIVTTIPTIGVFFHY 56
          MGLTFTK FSRLFAKKEM+ILM+GLDAAGKTTIL KLKLGEIVTTIPTIG F H+
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGKFLHF 55

BLAST of IVF0024467 vs. NCBI nr
Match: KAA0051138.1 (ADP-ribosylation factor 2 [Cucumis melo var. makuwa] >TYK03759.1 ADP-ribosylation factor 2 [Cucumis melo var. makuwa])

HSP 1 Score: 110 bits (274), Expect = 3.08e-30
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0

Query: 1  MGLTFTKHFSRLFAKKEMQILMIGLDAAGKTTILNKLKLGEIVTTIPTIGVFFHY 55
          MGLTFTKHFSRLFAKKEMQILMIGLDAAGKTTILNKLKLGEIVTTIPTIGVFFHY
Sbjct: 1  MGLTFTKHFSRLFAKKEMQILMIGLDAAGKTTILNKLKLGEIVTTIPTIGVFFHY 55

BLAST of IVF0024467 vs. NCBI nr
Match: KAE9614447.1 (putative small GTPase superfamily, ARF/SAR type, P-loop containing nucleoside triphosphate hydrolase [Lupinus albus])

HSP 1 Score: 97.1 bits (240), Expect = 5.56e-25
Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 0

Query: 1  MGLTFTKHFSRLFAKKEMQILMIGLDAAGKTTILNKLKLGEIVTTIPTIGVFFHY 55
          MGLTFTK FSRLFAKKEM+ILM+GLDAAGKTTIL KLKLGEIVTTIPTIG FFH+
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGKFFHF 55

BLAST of IVF0024467 vs. NCBI nr
Match: KAA0036532.1 (ADP-ribosylation factor 2 [Cucumis melo var. makuwa] >TYK13450.1 ADP-ribosylation factor 2 [Cucumis melo var. makuwa])

HSP 1 Score: 96.3 bits (238), Expect = 9.66e-25
Identity = 48/55 (87.27%), Postives = 52/55 (94.55%), Query Frame = 0

Query: 1  MGLTFTKHFSRLFAKKEMQILMIGLDAAGKTTILNKLKLGEIVTTIPTIGVFFHY 55
          MGLTFTK F+RLFAKKEMQILM+GLDAAGKTTIL KLKLGEI+TTIPT+GVFF Y
Sbjct: 1  MGLTFTKLFTRLFAKKEMQILMVGLDAAGKTTILYKLKLGEIITTIPTMGVFFDY 55

BLAST of IVF0024467 vs. NCBI nr
Match: KAE9597983.1 (putative small GTPase superfamily, ARF/SAR type, P-loop containing nucleoside triphosphate hydrolase [Lupinus albus])

HSP 1 Score: 94.7 bits (234), Expect = 7.41e-24
Identity = 48/55 (87.27%), Postives = 51/55 (92.73%), Query Frame = 0

Query: 1  MGLTFTKHFSRLFAKKEMQILMIGLDAAGKTTILNKLKLGEIVTTIPTIGVFFHY 55
          MGLTFTK FSRLFAKKEM+ILM+GLDAAGKTTIL KLKLGEIVTTIPTIG F H+
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGKFLHF 55

BLAST of IVF0024467 vs. NCBI nr
Match: RYQ89430.1 (hypothetical protein Ahy_B09g096084 isoform E [Arachis hypogaea])

HSP 1 Score: 92.0 bits (227), Expect = 7.77e-23
Identity = 47/55 (85.45%), Postives = 51/55 (92.73%), Query Frame = 0

Query: 1  MGLTFTKHFSRLFAKKEMQILMIGLDAAGKTTILNKLKLGEIVTTIPTIGVFFHY 55
          MGLTFTK FSRLFAKKEM+ILM+GLDAAGKTTIL KLKLGEIVTTIPTIG+F  +
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGMFLPF 55

BLAST of IVF0024467 vs. TAIR 10
Match: AT5G14670.1 (ADP-ribosylation factor A1B )

HSP 1 Score: 88.6 bits (218), Expect = 1.7e-18
Identity = 45/50 (90.00%), Postives = 47/50 (94.00%), Query Frame = 0

Query: 1  MGLTFTKHFSRLFAKKEMQILMIGLDAAGKTTILNKLKLGEIVTTIPTIG 51
          MGL FTK FSRLFAKKEM+ILM+GLDAAGKTTIL KLKLGEIVTTIPTIG
Sbjct: 1  MGLNFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

BLAST of IVF0024467 vs. TAIR 10
Match: AT1G70490.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 87.0 bits (214), Expect = 5.0e-18
Identity = 44/50 (88.00%), Postives = 47/50 (94.00%), Query Frame = 0

Query: 1  MGLTFTKHFSRLFAKKEMQILMIGLDAAGKTTILNKLKLGEIVTTIPTIG 51
          MGL+F K FSRLFAKKEM+ILM+GLDAAGKTTIL KLKLGEIVTTIPTIG
Sbjct: 1  MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

BLAST of IVF0024467 vs. TAIR 10
Match: AT1G23490.1 (ADP-ribosylation factor 1 )

HSP 1 Score: 87.0 bits (214), Expect = 5.0e-18
Identity = 44/50 (88.00%), Postives = 47/50 (94.00%), Query Frame = 0

Query: 1  MGLTFTKHFSRLFAKKEMQILMIGLDAAGKTTILNKLKLGEIVTTIPTIG 51
          MGL+F K FSRLFAKKEM+ILM+GLDAAGKTTIL KLKLGEIVTTIPTIG
Sbjct: 1  MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

BLAST of IVF0024467 vs. TAIR 10
Match: AT1G10630.1 (ADP-ribosylation factor A1F )

HSP 1 Score: 87.0 bits (214), Expect = 5.0e-18
Identity = 44/50 (88.00%), Postives = 47/50 (94.00%), Query Frame = 0

Query: 1  MGLTFTKHFSRLFAKKEMQILMIGLDAAGKTTILNKLKLGEIVTTIPTIG 51
          MGL+F K FSRLFAKKEM+ILM+GLDAAGKTTIL KLKLGEIVTTIPTIG
Sbjct: 1  MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

BLAST of IVF0024467 vs. TAIR 10
Match: AT1G70490.3 (Ras-related small GTP-binding family protein )

HSP 1 Score: 87.0 bits (214), Expect = 5.0e-18
Identity = 44/50 (88.00%), Postives = 47/50 (94.00%), Query Frame = 0

Query: 1  MGLTFTKHFSRLFAKKEMQILMIGLDAAGKTTILNKLKLGEIVTTIPTIG 51
          MGL+F K FSRLFAKKEM+ILM+GLDAAGKTTIL KLKLGEIVTTIPTIG
Sbjct: 1  MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q063966.4e-1892.00ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g08134... [more]
P518236.4e-1892.00ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF PE=2 S... [more]
P490766.4e-1892.00ADP-ribosylation factor OS=Zea mays OX=4577 GN=ARF1 PE=2 SV=2[more]
P518221.9e-1790.00ADP-ribosylation factor 1 OS=Daucus carota OX=4039 GN=ARF1 PE=2 SV=2[more]
O489201.9e-1790.00ADP-ribosylation factor OS=Vigna unguiculata OX=3917 GN=ARF PE=2 SV=3[more]
Match NameE-valueIdentityDescription
A0A5D3C0851.7e-21100.00ADP-ribosylation factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A6A4QLW61.5e-1789.09Putative small GTPase superfamily, ARF/SAR type, P-loop containing nucleoside tr... [more]
A0A5D3CPT12.5e-1787.27ADP-ribosylation factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A2P2LC402.5e-1790.74Putative adp-ribosylation factor 2 OS=Rhizophora mucronata OX=61149 PE=4 SV=1[more]
A0A6A4NZK47.3e-1787.27Putative small GTPase superfamily, ARF/SAR type, P-loop containing nucleoside tr... [more]
Match NameE-valueIdentityDescription
KAA0051138.13.08e-30100.00ADP-ribosylation factor 2 [Cucumis melo var. makuwa] >TYK03759.1 ADP-ribosylatio... [more]
KAE9614447.15.56e-2589.09putative small GTPase superfamily, ARF/SAR type, P-loop containing nucleoside tr... [more]
KAA0036532.19.66e-2587.27ADP-ribosylation factor 2 [Cucumis melo var. makuwa] >TYK13450.1 ADP-ribosylatio... [more]
KAE9597983.17.41e-2487.27putative small GTPase superfamily, ARF/SAR type, P-loop containing nucleoside tr... [more]
RYQ89430.17.77e-2385.45hypothetical protein Ahy_B09g096084 isoform E [Arachis hypogaea][more]
Match NameE-valueIdentityDescription
AT5G14670.11.7e-1890.00ADP-ribosylation factor A1B [more]
AT1G70490.15.0e-1888.00Ras-related small GTP-binding family protein [more]
AT1G23490.15.0e-1888.00ADP-ribosylation factor 1 [more]
AT1G10630.15.0e-1888.00ADP-ribosylation factor A1F [more]
AT1G70490.35.0e-1888.00Ras-related small GTP-binding family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 6..51
e-value: 2.2E-15
score: 56.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 3..54
e-value: 1.1E-15
score: 59.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..54
NoneNo IPR availablePANTHERPTHR11711ADP RIBOSYLATION FACTOR-RELATEDcoord: 1..51
NoneNo IPR availablePANTHERPTHR11711:SF377ADP RIBOSYLATION FACTORcoord: 1..51

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0024467.2IVF0024467.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding