IVF0024401 (gene) Melon (IVF77) v1

Overview
NameIVF0024401
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionEnvelope-like protein
Locationchr05: 16483804 .. 16484049 (-)
RNA-Seq ExpressionIVF0024401
SyntenyIVF0024401
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACATGCGCCCTTCCAGGAAACCTTGTGCGTTTGATACAGATGACATTGATGGTTCTATTGAAGGATTTTTTTGTTCCTCGTGATTTAGCCTCAAGAATCATCAACACTCTCATGGTTGAATCTCGAGCTCTCTCTACATCCACCAATTTGTTATTTGATAGAAGATTAGAGCTGGATTCTTTCGTTTGCAATTTAAAGACTCTTATTCGTTCTTCTAGTGCAACTGATCAGTCTCAAGAGTAG

mRNA sequence

ATGACATGCGCCCTTCCAGGAAACCTTGTGCGTTTGATACAGATGACATTGATGGTTCTATTGAAGGATTTTTTTGTTCCTCGTGATTTAGCCTCAAGAATCATCAACACTCTCATGGTTGAATCTCGAGCTCTCTCTACATCCACCAATTTGTTATTTGATAGAAGATTAGAGCTGGATTCTTTCGTTTGCAATTTAAAGACTCTTATTCGTTCTTCTAGTGCAACTGATCAGTCTCAAGAGTAG

Coding sequence (CDS)

ATGACATGCGCCCTTCCAGGAAACCTTGTGCGTTTGATACAGATGACATTGATGGTTCTATTGAAGGATTTTTTTGTTCCTCGTGATTTAGCCTCAAGAATCATCAACACTCTCATGGTTGAATCTCGAGCTCTCTCTACATCCACCAATTTGTTATTTGATAGAAGATTAGAGCTGGATTCTTTCGTTTGCAATTTAAAGACTCTTATTCGTTCTTCTAGTGCAACTGATCAGTCTCAAGAGTAG

Protein sequence

MTCALPGNLVRLIQMTLMVLLKDFFVPRDLASRIINTLMVESRALSTSTNLLFDRRLELDSFVCNLKTLIRSSSATDQSQE
Homology
BLAST of IVF0024401 vs. ExPASy TrEMBL
Match: A0A5A7TZW6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G001000 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 5.2e-11
Identity = 42/57 (73.68%), Postives = 46/57 (80.70%), Query Frame = 0

Query: 22  KDFFVPRDLASRIINTLMVESRALSTSTNLLFDRRLELDSFVCNLKTLIRSSSATDQ 79
           K FFV RDLASRIINTL +ESR LSTS NLLFDRRLE+DS V + KTLI SSS+  Q
Sbjct: 298 KGFFVHRDLASRIINTLTIESRVLSTSINLLFDRRLEVDSLVLHFKTLIPSSSSGAQ 354

BLAST of IVF0024401 vs. ExPASy TrEMBL
Match: A0A5D3DYF7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00960 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 6.8e-11
Identity = 41/57 (71.93%), Postives = 46/57 (80.70%), Query Frame = 0

Query: 22  KDFFVPRDLASRIINTLMVESRALSTSTNLLFDRRLELDSFVCNLKTLIRSSSATDQ 79
           K FF+ RDLASRIINTL +ESR LSTS NLLFDRRLE+DS V + KTLI SSS+  Q
Sbjct: 298 KGFFIHRDLASRIINTLTIESRVLSTSINLLFDRRLEVDSLVLHFKTLIPSSSSGAQ 354

BLAST of IVF0024401 vs. ExPASy TrEMBL
Match: A0A5D3BEJ9 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold598G00280 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 8.8e-11
Identity = 42/51 (82.35%), Postives = 45/51 (88.24%), Query Frame = 0

Query: 24  FFVPRDLASRIINTLMVESRALSTSTNLLFDRRLELDSFVCNLKTLIRSSS 75
           FFV RDLASRIINTL+VE+RALSTS NLLFDRRLE+DS V  LKTLI SSS
Sbjct: 331 FFVHRDLASRIINTLIVEARALSTSINLLFDRRLEVDSLVRRLKTLIPSSS 381

BLAST of IVF0024401 vs. ExPASy TrEMBL
Match: A0A5D3DJU1 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00900 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.5e-10
Identity = 43/58 (74.14%), Postives = 45/58 (77.59%), Query Frame = 0

Query: 24 FFVPRDLASRIINTLMVESRALSTSTNLLFDRRLELDSFVCNLKTLIRSSSATDQSQE 82
          FFVP DLASRIINTL  ESR LSTS NLL DRRLE+ S V  LKTLI SSSA D +QE
Sbjct: 42 FFVPCDLASRIINTLTAESRTLSTSINLLSDRRLEVHSLVRRLKTLIPSSSAVDPTQE 99

BLAST of IVF0024401 vs. ExPASy TrEMBL
Match: A0A5A7TUQ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00250 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.5e-10
Identity = 42/58 (72.41%), Postives = 47/58 (81.03%), Query Frame = 0

Query: 24  FFVPRDLASRIINTLMVESRALSTSTNLLFDRRLELDSFVCNLKTLIRSSSATDQSQE 82
           FFVP DLAS+IINTL   SRALSTS N+L  RRLE+DS V +LKTLI SSSA DQ+QE
Sbjct: 351 FFVPCDLASKIINTLTTGSRALSTSINMLSSRRLEVDSLVRHLKTLIPSSSAVDQAQE 408

BLAST of IVF0024401 vs. NCBI nr
Match: KAA0058853.1 (envelope-like protein [Cucumis melo var. makuwa] >TYK23768.1 envelope-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 74.7 bits (182), Expect = 4.22e-15
Identity = 43/60 (71.67%), Postives = 46/60 (76.67%), Query Frame = 0

Query: 22 KDFFVPRDLASRIINTLMVESRALSTSTNLLFDRRLELDSFVCNLKTLIRSSSATDQSQE 81
          + FFVP DLASRIINTL  ESR LSTS NLL DRRLE+ S V  LKTLI SSSA D +QE
Sbjct: 40 EGFFVPCDLASRIINTLTAESRTLSTSINLLSDRRLEVHSLVRRLKTLIPSSSAVDPTQE 99

BLAST of IVF0024401 vs. NCBI nr
Match: KAA0048488.1 (uncharacterized protein E6C27_scaffold61G001000 [Cucumis melo var. makuwa])

HSP 1 Score: 75.9 bits (185), Expect = 6.44e-14
Identity = 42/57 (73.68%), Postives = 46/57 (80.70%), Query Frame = 0

Query: 22  KDFFVPRDLASRIINTLMVESRALSTSTNLLFDRRLELDSFVCNLKTLIRSSSATDQ 78
           K FFV RDLASRIINTL +ESR LSTS NLLFDRRLE+DS V + KTLI SSS+  Q
Sbjct: 298 KGFFVHRDLASRIINTLTIESRVLSTSINLLFDRRLEVDSLVLHFKTLIPSSSSGAQ 354

BLAST of IVF0024401 vs. NCBI nr
Match: XP_008452365.1 (PREDICTED: uncharacterized protein LOC103493426 [Cucumis melo])

HSP 1 Score: 74.7 bits (182), Expect = 7.69e-14
Identity = 42/60 (70.00%), Postives = 48/60 (80.00%), Query Frame = 0

Query: 22  KDFFVPRDLASRIINTLMVESRALSTSTNLLFDRRLELDSFVCNLKTLIRSSSATDQSQE 81
           + FFVP DLAS+IINTL   SRALSTS N+L  RRLE+DS V +LKTLI SSSA DQ+QE
Sbjct: 203 EGFFVPCDLASKIINTLTTGSRALSTSINMLSSRRLEVDSLVRHLKTLIPSSSAVDQAQE 262

BLAST of IVF0024401 vs. NCBI nr
Match: KAA0054599.1 (uncharacterized protein E6C27_scaffold24G004000 [Cucumis melo var. makuwa] >TYK27563.1 uncharacterized protein E5676_scaffold22G00360 [Cucumis melo var. makuwa])

HSP 1 Score: 73.9 bits (180), Expect = 7.89e-14
Identity = 40/57 (70.18%), Postives = 45/57 (78.95%), Query Frame = 0

Query: 22  KDFFVPRDLASRIINTLMVESRALSTSTNLLFDRRLELDSFVCNLKTLIRSSSATDQ 78
           +  FVP DLASRIIN    ES+ALSTS  LL+DRRLE+DS VC+LKTLI SSSA DQ
Sbjct: 160 EGVFVPCDLASRIINMFTAESQALSTSIKLLYDRRLEVDSLVCHLKTLIPSSSAADQ 216

BLAST of IVF0024401 vs. NCBI nr
Match: TYK28280.1 (uncharacterized protein E5676_scaffold600G00960 [Cucumis melo var. makuwa])

HSP 1 Score: 75.5 bits (184), Expect = 8.89e-14
Identity = 41/57 (71.93%), Postives = 46/57 (80.70%), Query Frame = 0

Query: 22  KDFFVPRDLASRIINTLMVESRALSTSTNLLFDRRLELDSFVCNLKTLIRSSSATDQ 78
           K FF+ RDLASRIINTL +ESR LSTS NLLFDRRLE+DS V + KTLI SSS+  Q
Sbjct: 298 KGFFIHRDLASRIINTLTIESRVLSTSINLLFDRRLEVDSLVLHFKTLIPSSSSGAQ 354

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TZW65.2e-1173.68Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3DYF76.8e-1171.93Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BEJ98.8e-1182.35Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold59... [more]
A0A5D3DJU11.5e-1074.14Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16... [more]
A0A5A7TUQ01.5e-1072.41Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0058853.14.22e-1571.67envelope-like protein [Cucumis melo var. makuwa] >TYK23768.1 envelope-like prote... [more]
KAA0048488.16.44e-1473.68uncharacterized protein E6C27_scaffold61G001000 [Cucumis melo var. makuwa][more]
XP_008452365.17.69e-1470.00PREDICTED: uncharacterized protein LOC103493426 [Cucumis melo][more]
KAA0054599.17.89e-1470.18uncharacterized protein E6C27_scaffold24G004000 [Cucumis melo var. makuwa] >TYK2... [more]
TYK28280.18.89e-1471.93uncharacterized protein E5676_scaffold600G00960 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0024401.1IVF0024401.1mRNA