IVF0024385 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACATATTGTGAGGACGTTGACGACGTGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACGACCTAGCTGAATCGATATTAACCGATTGGCAGTTGCGTAACGCTTAG ATGACATATTGTGAGGACGTTGACGACGTGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACGACCTAGCTGAATCGATATTAACCGATTGGCAGTTGCGTAACGCTTAG ATGACATATTGTGAGGACGTTGACGACGTGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACGACCTAGCTGAATCGATATTAACCGATTGGCAGTTGCGTAACGCTTAG MTYCEDVDDVDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESILTDWQLRNA Homology
BLAST of IVF0024385 vs. ExPASy TrEMBL
Match: A0A5A7SMG5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold417G00160 PE=3 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 6.8e-23 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0024385 vs. ExPASy TrEMBL
Match: A0A5D3C0Q5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00540 PE=3 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 6.8e-23 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0024385 vs. ExPASy TrEMBL
Match: A0A5A7U3B3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold172G00460 PE=3 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 2.2e-21 Identity = 52/55 (94.55%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of IVF0024385 vs. ExPASy TrEMBL
Match: A0A5A7ST53 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002720 PE=3 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 4.9e-21 Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of IVF0024385 vs. ExPASy TrEMBL
Match: A0A5D3C4P9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold9399G00010 PE=3 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 4.9e-21 Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of IVF0024385 vs. NCBI nr
Match: TYK04752.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 113 bits (283), Expect = 5.10e-29 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0024385 vs. NCBI nr
Match: KAA0025431.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 113 bits (283), Expect = 5.53e-29 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0024385 vs. NCBI nr
Match: TYK05336.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 107 bits (267), Expect = 1.52e-28 Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of IVF0024385 vs. NCBI nr
Match: KAA0054051.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYJ96871.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 103 bits (258), Expect = 8.54e-28 Identity = 48/55 (87.27%), Postives = 52/55 (94.55%), Query Frame = 0
BLAST of IVF0024385 vs. NCBI nr
Match: KAA0062284.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 105 bits (262), Expect = 8.81e-28 Identity = 49/55 (89.09%), Postives = 53/55 (96.36%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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