IVF0024363 (gene) Melon (IVF77) v1

Overview


Name	IVF0024363
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	thymocyte nuclear protein 1
Location	chr07: 24391586 .. 24392423 (-)
RNA-Seq Expression	IVF0024363
Synteny	IVF0024363

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGACGGATACTAAAAATTTTAAGTACTGTGTATAAATAAATGAGGAGGGCCATCAATTTAGGCGCCAATATAACCACCATTTTCCCGCCGGTAACTTCACCGACGTCAACATCTCTTCTTCCTCTCCCACTTAACCGTCACAAGCGGAACGCAGTCATTCGTTCGGAGAAAACAATGGCCAACCCCGTCGCCGGAGACAAAAGGCAGTATTGGCTTCTCAAGACGGAGCCGGCAGAGTGGTCATGGGCGGACCAAGCCGCCAACGACGGACGATCAAAGTGGGACGGCGTTAAGAACAAGCAAGCTCAGAAGCATCTTAAGTCCATGAAACTCGGCGACCGCTGTTTCTTCTACCACTCGGGCGCCAAGGCCCGCCGTGTCGTGGGCGTGGTCGCGGTCGCAAGGGAGTGGTACTCATCGGTGGAGGATGAAGTTGTCGTGGACGTGGAGGCAGTTGGAGAGATGAGGGAACCGGTGGATTTGAAAGAGATGAAGAAGGGGATGGAAGGGATGAAGAATTTCGCTCTGTTTAGGCAACCGAGGCTGTCGGTCGTGCCGGTTGCGAAGGAGATTTGGGATAAAATCTGCGAATTGGGAGGCGGATTTGAAGGAGATGGAACTGAGGGCGGGCATGGGAGTGATTGAATTTGAATGCTCTCAAGGTGTTTGTGAATATTCTCAGGAGAATTTTAAGGGAATTGAATGCATAAACCGTATCTGTTTTGGAAATGTGGGAAGAAGAAGATCTAGAAAGGGAAAGGCTCAGTCAGGTATATATATATATCTATACATATTGTTTTTGTTGTCTGTTTAATGGTGGCTTATGAATTCTTGGGG

mRNA sequence

AGGACGGATACTAAAAATTTTAAGTACTGTGTATAAATAAATGAGGAGGGCCATCAATTTAGGCGCCAATATAACCACCATTTTCCCGCCGGTAACTTCACCGACGTCAACATCTCTTCTTCCTCTCCCACTTAACCGTCACAAGCGGAACGCAGTCATTCGTTCGGAGAAAACAATGGCCAACCCCGTCGCCGGAGACAAAAGGCAGTATTGGCTTCTCAAGACGGAGCCGGCAGAGTGGTCATGGGCGGACCAAGCCGCCAACGACGGACGATCAAAGTGGGACGGCGTTAAGAACAAGCAAGCTCAGAAGCATCTTAAGTCCATGAAACTCGGCGACCGCTGTTTCTTCTACCACTCGGGCGCCAAGGCCCGCCGTGTCGTGGGCGTGGTCGCGGTCGCAAGGGAGTGGTACTCATCGGTGGAGGATGAAGTTGTCGTGGACGTGGAGGCAGTTGGAGAGATGAGGGAACCGGTGGATTTGAAAGAGATGAAGAAGGGGATGGAAGGGATGAAGAATTTCGCTCTGTTTAGGCAACCGAGGCTGTCGGTCGTGCCGGTTGCGAAGGAGATTTGGGATAAAATCTGCGAATTGGGAGGCGGATTTGAAGGAGATGGAACTGAGGGCGGGCATGGGAGTGATTGAATTTGAATGCTCTCAAGGTGTTTGTGAATATTCTCAGGAGAATTTTAAGGGAATTGAATGCATAAACCGTATCTGTTTTGGAAATGTGGGAAGAAGAAGATCTAGAAAGGGAAAGGCTCAGTCAGGTATATATATATATCTATACATATTGTTTTTGTTGTCTGTTTAATGGTGGCTTATGAATTCTTGGGG

Coding sequence (CDS)

ATGAGGAGGGCCATCAATTTAGGCGCCAATATAACCACCATTTTCCCGCCGGTAACTTCACCGACGTCAACATCTCTTCTTCCTCTCCCACTTAACCGTCACAAGCGGAACGCAGTCATTCGTTCGGAGAAAACAATGGCCAACCCCGTCGCCGGAGACAAAAGGCAGTATTGGCTTCTCAAGACGGAGCCGGCAGAGTGGTCATGGGCGGACCAAGCCGCCAACGACGGACGATCAAAGTGGGACGGCGTTAAGAACAAGCAAGCTCAGAAGCATCTTAAGTCCATGAAACTCGGCGACCGCTGTTTCTTCTACCACTCGGGCGCCAAGGCCCGCCGTGTCGTGGGCGTGGTCGCGGTCGCAAGGGAGTGGTACTCATCGGTGGAGGATGAAGTTGTCGTGGACGTGGAGGCAGTTGGAGAGATGAGGGAACCGGTGGATTTGAAAGAGATGAAGAAGGGGATGGAAGGGATGAAGAATTTCGCTCTGTTTAGGCAACCGAGGCTGTCGGTCGTGCCGGTTGCGAAGGAGATTTGGGATAAAATCTGCGAATTGGGAGGCGGATTTGAAGGAGATGGAACTGAGGGCGGGCATGGGAGTGATTGA

Protein sequence

MRRAINLGANITTIFPPVTSPTSTSLLPLPLNRHKRNAVIRSEKTMANPVAGDKRQYWLLKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVAVAREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWDKICELGGGFEGDGTEGGHGSD

Homology

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BLAST of IVF0024363 vs. ExPASy Swiss-Prot
Match: Q91YJ3 (Thymocyte nuclear protein 1 OS=Mus musculus OX=10090 GN=Thyn1 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.9e-13
Identity = 57/164 (34.76%), Postives = 85/164 (51.83%), Query Frame = 0


Query: 57  YWLLKTEP---------AEWSWADQAANDGRSK-WDGVKNKQAQKHLKSMKLGDRCFFYH 116
           YWL+K+EP          ++S  D  A   ++  WDGV+N QA+  L++MKL D  FFYH
Sbjct: 57  YWLMKSEPESRLEKGIDMKFSIEDLKAQPKQTACWDGVRNYQARNFLRAMKLEDEAFFYH 116

Query: 117 SGAKARRVVGVVAVAREWY---------------SSVEDE---VVVDVEAVGEMREPVDL 176
           S  K   +VG++ + +E Y               SS ED+    +VDV+ V  M+  + L
Sbjct: 117 SNCKQPGIVGLMKIVKEAYPDHTQFEKSNPHYDPSSKEDDPKWSMVDVQFVRMMKRFIPL 176

Query: 177 KEMK------KGMEG-MKNFALFRQPRLSVVPVAKEIWDKICEL 186
           +E+K      K   G +K+  LF + RLSV P+ +E +D I  L
Sbjct: 177 EELKTYHQAHKATGGPLKSMTLFTRQRLSVQPLTQEEFDFILSL 220

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BLAST of IVF0024363 vs. ExPASy Swiss-Prot
Match: Q6P3E0 (Thymocyte nuclear protein 1 OS=Rattus norvegicus OX=10116 GN=Thyn1 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.0e-12
Identity = 62/179 (34.64%), Postives = 87/179 (48.60%), Query Frame = 0


Query: 43  EKTMANPVAG-DKRQYWLLKTEP---------AEWSWAD-QAANDGRSKWDGVKNKQAQK 102
           EKT      G +   YWL+K+EP          ++S  D QA     + WDGV+N QA  
Sbjct: 42  EKTTTFKTCGKNLSNYWLMKSEPESRLEKGIDMKFSIEDLQAQPKQTTCWDGVRNYQAWN 101

Query: 103 HLKSMKLGDRCFFYHSGAKARRVVGVVAVAREWY---------------SSVEDE---VV 162
            L++MKL D  FFYHS  K   +VG++ + +E Y               SS ED     +
Sbjct: 102 FLRAMKLEDEAFFYHSNCKQPGIVGLMKIVKEAYPDHTQFEKNDPHYDPSSKEDNPKWSM 161

Query: 163 VDVEAVGEMREPVDLKEMK------KGMEG-MKNFALFRQPRLSVVPVAKEIWDKICEL 186
           VDV+ V  M+  + L E+K      K   G +K+  LF + RLSV P+ +E +D I  L
Sbjct: 162 VDVQFVRMMKRFISLDELKTYHQAHKATGGPLKSMTLFTRQRLSVQPLTQEEFDFILSL 220

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BLAST of IVF0024363 vs. ExPASy Swiss-Prot
Match: Q9P016 (Thymocyte nuclear protein 1 OS=Homo sapiens OX=9606 GN=THYN1 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.3e-12
Identity = 54/164 (32.93%), Postives = 83/164 (50.61%), Query Frame = 0


Query: 57  YWLLKTEP---------AEWSWADQAANDGRSK-WDGVKNKQAQKHLKSMKLGDRCFFYH 116
           +WL+K+EP          ++S  D  A   ++  WDGV+N QA+  L++MKLG+  FFYH
Sbjct: 56  HWLMKSEPESRLEKGVDVKFSIEDLKAQPKQTTCWDGVRNYQARNFLRAMKLGEEAFFYH 115

Query: 117 SGAKARRVVGVVAVAREWY---------------SSVEDE---VVVDVEAVGEMREPVDL 176
           S  K   + G++ + +E Y               SS ED     +VDV+ V  M+  + L
Sbjct: 116 SNCKEPGIAGLMKIVKEAYPDHTQFEKNNPHYDPSSKEDNPKWSMVDVQFVRMMKRFIPL 175

Query: 177 KEMK------KGMEG-MKNFALFRQPRLSVVPVAKEIWDKICEL 186
            E+K      K   G +KN  LF + RLS+ P+ +E +D +  L
Sbjct: 176 AELKSYHQAHKATGGPLKNMVLFTRQRLSIQPLTQEEFDFVLSL 219

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BLAST of IVF0024363 vs. ExPASy Swiss-Prot
Match: Q90679 (Thymocyte nuclear protein 1 OS=Gallus gallus OX=9031 GN=THYN1 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.9e-11
Identity = 54/164 (32.93%), Postives = 82/164 (50.00%), Query Frame = 0


Query: 57  YWLLKTEP---------AEWSWADQAANDGRSK-WDGVKNKQAQKHLKSMKLGDRCFFYH 116
           +WLLK+EP          ++S  D  A   ++  W+GV+N QA+  L++MKLG + FFYH
Sbjct: 73  HWLLKSEPESRLEKGVDVKFSIEDLKAQPNQTTFWEGVRNYQARNFLRAMKLGQQAFFYH 132

Query: 117 SGAKARRVVGVVAVAREWY--------------SSVEDE----VVVDVEAVGEMREPVDL 176
           S  K   +VG+V + +E Y              SS   E     +VDV+ V   +  + L
Sbjct: 133 SNCKEPGIVGIVKIVKEAYPDHTQFDQKDPHYDSSSRKENPKWSMVDVQFVRMTKRFIPL 192

Query: 177 KEMK------KGMEG-MKNFALFRQPRLSVVPVAKEIWDKICEL 186
            E+K      K   G +KN  LF + RLS+ P+ +E +D +  L
Sbjct: 193 SEIKTHHLAHKADGGPLKNMMLFSRQRLSIQPLTQEEFDFVLSL 236

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BLAST of IVF0024363 vs. ExPASy Swiss-Prot
Match: Q6PFL8 (Thymocyte nuclear protein 1 OS=Danio rerio OX=7955 GN=thyn1 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.1e-10
Identity = 54/190 (28.42%), Postives = 91/190 (47.89%), Query Frame = 0


Query: 33  RHKRNAVIRSEKTMANPVAGDKRQY--WLLKTEP---------AEWSWAD-QAANDGRSK 92
           + KR+A ++ +    N     K  Y  WL+K+EP          ++   D +A  +    
Sbjct: 36  KRKRSAAVKGDVENKNDDDACKPSYSRWLMKSEPESRIENGVDVKFGIEDLKALPNQTGC 95

Query: 93  WDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVAVAREWY--------------- 152
           WDGV+N QA+  ++ MK+G + FFYHS  K   + G++ + +E Y               
Sbjct: 96  WDGVRNYQARNFMREMKVGQQAFFYHSNCKEPGIAGLMKIVKEAYVDHTQFDKKDVHYDP 155

Query: 153 SSVEDEV---VVDVEAVGEMREPVDLKEMKK-----GMEG--MKNFALFRQPRLSVVPVA 186
           SS  D     +VDV+    ++  + L E+KK      ++G  +K+ ALF + RLSV P+ 
Sbjct: 156 SSKADNPKWHMVDVQFERMVKRFIPLAELKKYHLEHRVKGGPLKDMALFTRARLSVQPLT 215

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BLAST of IVF0024363 vs. ExPASy TrEMBL
Match: E5GBH2 (EVE domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 4.1e-110
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MRRAINLGANITTIFPPVTSPTSTSLLPLPLNRHKRNAVIRSEKTMANPVAGDKRQYWLL 60
           MRRAINLGANITTIFPPVTSPTSTSLLPLPLNRHKRNAVIRSEKTMANPVAGDKRQYWLL
Sbjct: 1   MRRAINLGANITTIFPPVTSPTSTSLLPLPLNRHKRNAVIRSEKTMANPVAGDKRQYWLL 60

Query: 61  KTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVAV 120
           KTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVAV
Sbjct: 61  KTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVAV 120

Query: 121 AREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWD 180
           AREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWD
Sbjct: 121 AREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWD 180

Query: 181 KICELGGGFEGDGTEGGHGSD 202
           KICELGGGFEGDGTEGGHGSD
Sbjct: 181 KICELGGGFEGDGTEGGHGSD 201

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BLAST of IVF0024363 vs. ExPASy TrEMBL
Match: A0A1S4E0I6 (thymocyte nuclear protein 1 OS=Cucumis melo OX=3656 GN=LOC103494826 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 4.1e-110
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MRRAINLGANITTIFPPVTSPTSTSLLPLPLNRHKRNAVIRSEKTMANPVAGDKRQYWLL 60
           MRRAINLGANITTIFPPVTSPTSTSLLPLPLNRHKRNAVIRSEKTMANPVAGDKRQYWLL
Sbjct: 1   MRRAINLGANITTIFPPVTSPTSTSLLPLPLNRHKRNAVIRSEKTMANPVAGDKRQYWLL 60

Query: 61  KTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVAV 120
           KTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVAV
Sbjct: 61  KTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVAV 120

Query: 121 AREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWD 180
           AREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWD
Sbjct: 121 AREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWD 180

Query: 181 KICELGGGFEGDGTEGGHGSD 202
           KICELGGGFEGDGTEGGHGSD
Sbjct: 181 KICELGGGFEGDGTEGGHGSD 201

[Close]

BLAST of IVF0024363 vs. ExPASy TrEMBL
Match: A0A0A0KWC0 (EVE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G000630 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 4.9e-95
Identity = 180/202 (89.11%), Postives = 187/202 (92.57%), Query Frame = 0


Query: 1   MRRAINLGANITTIFPPVTSPTSTSLLPLPLNRHKR-NAVIRSEKTMANPVAGDKRQYWL 60
           MRRA+ LG NITTIFP    P+  SLLPLPLN HK+ +AVIRSEKTMAN VAGDKRQYWL
Sbjct: 1   MRRAMYLGGNITTIFPLEILPSLPSLLPLPLNHHKQISAVIRSEKTMANAVAGDKRQYWL 60

Query: 61  LKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVA 120
           LKTEPAEWSWADQAANDGR+ WDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVA
Sbjct: 61  LKTEPAEWSWADQAANDGRTTWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVA 120

Query: 121 VAREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIW 180
           VAREWYSSV+DEVVVDVEAVGEMREPVDLKEMKK MEGMKNFALFRQPRLSVVPV KEIW
Sbjct: 121 VAREWYSSVDDEVVVDVEAVGEMREPVDLKEMKKRMEGMKNFALFRQPRLSVVPVTKEIW 180

Query: 181 DKICELGGGFEGDGTEGGHGSD 202
           DKICELGGGFEGDGTEGG GS+
Sbjct: 181 DKICELGGGFEGDGTEGGDGSE 202

[Close]

BLAST of IVF0024363 vs. ExPASy TrEMBL
Match: A0A5D3E131 (Thymocyte nuclear protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00410 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.8e-84
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 46  MANPVAGDKRQYWLLKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFY 105
           MANPVAGDKRQYWLLKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFY
Sbjct: 1   MANPVAGDKRQYWLLKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFY 60

Query: 106 HSGAKARRVVGVVAVAREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFR 165
           HSGAKARRVVGVVAVAREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFR
Sbjct: 61  HSGAKARRVVGVVAVAREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFR 120

Query: 166 QPRLSVVPVAKEIWDKICELGGGFEGDGTEGGHGSD 202
           QPRLSVVPVAKEIWDKICELGGGFEGDGTEGGHGSD
Sbjct: 121 QPRLSVVPVAKEIWDKICELGGGFEGDGTEGGHGSD 156

[Close]

BLAST of IVF0024363 vs. ExPASy TrEMBL
Match: A0A6J1JS35 (thymocyte nuclear protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111489276 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 7.9e-69
Identity = 130/157 (82.80%), Postives = 144/157 (91.72%), Query Frame = 0


Query: 46  MANPVAGDKRQYWLLKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFY 105
           MA+   GDK+Q+WLLKTEPAEWSWADQAAN GR+KWDGVKNKQAQKHLKSMKLGD CFFY
Sbjct: 1   MADAAVGDKKQFWLLKTEPAEWSWADQAANGGRTKWDGVKNKQAQKHLKSMKLGDHCFFY 60

Query: 106 HSGAKARRVVGVVAVAREWYSSVE-DEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALF 165
           HSGAKARR+VGVV+VAREWYS  +  + VVDVE VGEMREPVDLKEMKKG+EGMK+FALF
Sbjct: 61  HSGAKARRIVGVVSVAREWYSEGDGGDGVVDVEEVGEMREPVDLKEMKKGIEGMKDFALF 120

Query: 166 RQPRLSVVPVAKEIWDKICELGGGFEGDGTEGGHGSD 202
           RQPRLSVVPVAKEIW+KICELGGGFEGDGT+  HG++
Sbjct: 121 RQPRLSVVPVAKEIWEKICELGGGFEGDGTDCRHGNE 157

[Close]

BLAST of IVF0024363 vs. NCBI nr
Match: XP_016901490.1 (PREDICTED: thymocyte nuclear protein 1 [Cucumis melo] >ADN33814.1 hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 407 bits (1046), Expect = 2.51e-143
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MRRAINLGANITTIFPPVTSPTSTSLLPLPLNRHKRNAVIRSEKTMANPVAGDKRQYWLL 60
           MRRAINLGANITTIFPPVTSPTSTSLLPLPLNRHKRNAVIRSEKTMANPVAGDKRQYWLL
Sbjct: 1   MRRAINLGANITTIFPPVTSPTSTSLLPLPLNRHKRNAVIRSEKTMANPVAGDKRQYWLL 60

Query: 61  KTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVAV 120
           KTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVAV
Sbjct: 61  KTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVAV 120

Query: 121 AREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWD 180
           AREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWD
Sbjct: 121 AREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWD 180

Query: 181 KICELGGGFEGDGTEGGHGSD 201
           KICELGGGFEGDGTEGGHGSD
Sbjct: 181 KICELGGGFEGDGTEGGHGSD 201

[Close]

BLAST of IVF0024363 vs. NCBI nr
Match: XP_004150262.2 (thymocyte nuclear protein 1 [Cucumis sativus] >KGN52742.1 hypothetical protein Csa_014551 [Cucumis sativus])

HSP 1 Score: 357 bits (916), Expect = 1.78e-123
Identity = 180/202 (89.11%), Postives = 187/202 (92.57%), Query Frame = 0


Query: 1   MRRAINLGANITTIFPPVTSPTSTSLLPLPLNRHKR-NAVIRSEKTMANPVAGDKRQYWL 60
           MRRA+ LG NITTIFP    P+  SLLPLPLN HK+ +AVIRSEKTMAN VAGDKRQYWL
Sbjct: 1   MRRAMYLGGNITTIFPLEILPSLPSLLPLPLNHHKQISAVIRSEKTMANAVAGDKRQYWL 60

Query: 61  LKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVA 120
           LKTEPAEWSWADQAANDGR+ WDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVA
Sbjct: 61  LKTEPAEWSWADQAANDGRTTWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVA 120

Query: 121 VAREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIW 180
           VAREWYSSV+DEVVVDVEAVGEMREPVDLKEMKK MEGMKNFALFRQPRLSVVPV KEIW
Sbjct: 121 VAREWYSSVDDEVVVDVEAVGEMREPVDLKEMKKRMEGMKNFALFRQPRLSVVPVTKEIW 180

Query: 181 DKICELGGGFEGDGTEGGHGSD 201
           DKICELGGGFEGDGTEGG GS+
Sbjct: 181 DKICELGGGFEGDGTEGGDGSE 202

[Close]

BLAST of IVF0024363 vs. NCBI nr
Match: KAA0044320.1 (thymocyte nuclear protein 1 [Cucumis melo var. makuwa] >TYK29448.1 thymocyte nuclear protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 321 bits (822), Expect = 7.29e-110
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 46  MANPVAGDKRQYWLLKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFY 105
           MANPVAGDKRQYWLLKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFY
Sbjct: 1   MANPVAGDKRQYWLLKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFY 60

Query: 106 HSGAKARRVVGVVAVAREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFR 165
           HSGAKARRVVGVVAVAREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFR
Sbjct: 61  HSGAKARRVVGVVAVAREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFR 120

Query: 166 QPRLSVVPVAKEIWDKICELGGGFEGDGTEGGHGSD 201
           QPRLSVVPVAKEIWDKICELGGGFEGDGTEGGHGSD
Sbjct: 121 QPRLSVVPVAKEIWDKICELGGGFEGDGTEGGHGSD 156

[Close]

BLAST of IVF0024363 vs. NCBI nr
Match: XP_038905606.1 (thymocyte nuclear protein 1 [Benincasa hispida])

HSP 1 Score: 301 bits (772), Expect = 3.15e-102
Identity = 145/156 (92.95%), Postives = 152/156 (97.44%), Query Frame = 0


Query: 46  MANPVAGDKRQYWLLKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFY 105
           MA  VAGD++QYWLLKTEPAEWSWADQAANDGR+KWDGVKNKQAQKHLKSMKLGD CFFY
Sbjct: 1   MAKDVAGDRKQYWLLKTEPAEWSWADQAANDGRTKWDGVKNKQAQKHLKSMKLGDLCFFY 60

Query: 106 HSGAKARRVVGVVAVAREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFR 165
           HSGAKARRVVGVVAVAREWYS+ +D+VVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFR
Sbjct: 61  HSGAKARRVVGVVAVAREWYSADDDDVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFR 120

Query: 166 QPRLSVVPVAKEIWDKICELGGGFEGDGTEGGHGSD 201
           QPRLSVVPVAKEIWDKICELGGGFEGDGTEGGHGS+
Sbjct: 121 QPRLSVVPVAKEIWDKICELGGGFEGDGTEGGHGSE 156

[Close]

BLAST of IVF0024363 vs. NCBI nr
Match: KAG7030934.1 (Thymocyte nuclear protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 302 bits (774), Expect = 2.29e-100
Identity = 150/199 (75.38%), Postives = 169/199 (84.92%), Query Frame = 0


Query: 4   AINLGANITTIFPPVTSPTSTSLLPLPLNRHKRNAVIRSEKTMANPVAGDKRQYWLLKTE 63
           A  +GAN++ IFPP  SPTS SLLPLP +         S K MA+  AGDK+Q+WLLKTE
Sbjct: 104 ATEIGANVSAIFPPGKSPTSLSLLPLPTSTKTTITSTSSSKIMADAAAGDKKQFWLLKTE 163

Query: 64  PAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVAVARE 123
           PAEWSWADQAAN GR+KWDGVKNKQAQK+LKSMKLGD CFFYHSGAKARR+VGV++VARE
Sbjct: 164 PAEWSWADQAANGGRTKWDGVKNKQAQKYLKSMKLGDLCFFYHSGAKARRIVGVISVARE 223

Query: 124 WYSSVED-EVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWDKI 183
           WYS  +  + VVDVEAVGEMRE VDLKEMKKG+EGMK+FALFRQPRLSVVPVAKEIW+KI
Sbjct: 224 WYSEGDGGDAVVDVEAVGEMREAVDLKEMKKGIEGMKDFALFRQPRLSVVPVAKEIWEKI 283

Query: 184 CELGGGFEGDGTEGGHGSD 201
           CELGGGFEGDGT+  HGS+
Sbjct: 284 CELGGGFEGDGTDCRHGSE 302

[Close]

BLAST of IVF0024363 vs. TAIR 10
Match: AT2G14660.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0310 (InterPro:IPR002740); Has 2761 Blast hits to 2761 proteins in 686 species: Archae - 5; Bacteria - 1143; Metazoa - 73; Fungi - 78; Plants - 42; Viruses - 0; Other Eukaryotes - 1420 (source: NCBI BLink). )

HSP 1 Score: 200.3 bits (508), Expect = 1.5e-51
Identity = 104/156 (66.67%), Postives = 121/156 (77.56%), Query Frame = 0


Query: 52  GDKRQYWLLKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKA 111
           G  ++YWLLKTEP EWSW+DQ +N G SKWDGVKNKQAQK+LKSM LGD CFFYHSG K+
Sbjct: 2   GKTKRYWLLKTEPNEWSWSDQESNGGISKWDGVKNKQAQKNLKSMTLGDLCFFYHSGTKS 61

Query: 112 RRVVGVVAVAREWYS----SVEDEVVVDVEAVGEMREPVDLKEMKKGMEGM--KNFALFR 171
           R VVGVV V+REWY+     VE E  VDV+A+GEMR+ VDLKEM KG +G+  K F LFR
Sbjct: 62  RCVVGVVEVSREWYTDDAEGVEGEGAVDVKAIGEMRKCVDLKEM-KGDKGIITKGFVLFR 121

Query: 172 QPRLSVVPVAKEIWDKICELGGGFEGDGTEGGHGSD 202
           QPRLSVVPV +++W+ ICELG GF GDG E    SD
Sbjct: 122 QPRLSVVPVEEDVWNMICELGNGFCGDGKEDCESSD 156

The following BLAST results are available for this feature:

BLAST of IVF0024363 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q91YJ3	5.9e-13	34.76	Thymocyte nuclear protein 1 OS=Mus musculus OX=10090 GN=Thyn1 PE=1 SV=1	[more]
Q6P3E0	1.0e-12	34.64	Thymocyte nuclear protein 1 OS=Rattus norvegicus OX=10116 GN=Thyn1 PE=2 SV=1	[more]
Q9P016	2.3e-12	32.93	Thymocyte nuclear protein 1 OS=Homo sapiens OX=9606 GN=THYN1 PE=1 SV=1	[more]
Q90679	1.9e-11	32.93	Thymocyte nuclear protein 1 OS=Gallus gallus OX=9031 GN=THYN1 PE=1 SV=1	[more]
Q6PFL8	6.1e-10	28.42	Thymocyte nuclear protein 1 OS=Danio rerio OX=7955 GN=thyn1 PE=2 SV=1	[more]

BLAST of IVF0024363 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E5GBH2	4.1e-110	100.00	EVE domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S4E0I6	4.1e-110	100.00	thymocyte nuclear protein 1 OS=Cucumis melo OX=3656 GN=LOC103494826 PE=4 SV=1	[more]
A0A0A0KWC0	4.9e-95	89.11	EVE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G000630 PE=4 SV...	[more]
A0A5D3E131	1.8e-84	100.00	Thymocyte nuclear protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A6J1JS35	7.9e-69	82.80	thymocyte nuclear protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111489276 PE=4 SV=...	[more]

BLAST of IVF0024363 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901490.1	2.51e-143	100.00	PREDICTED: thymocyte nuclear protein 1 [Cucumis melo] >ADN33814.1 hypothetical p...	[more]
XP_004150262.2	1.78e-123	89.11	thymocyte nuclear protein 1 [Cucumis sativus] >KGN52742.1 hypothetical protein C...	[more]
KAA0044320.1	7.29e-110	100.00	thymocyte nuclear protein 1 [Cucumis melo var. makuwa] >TYK29448.1 thymocyte nuc...	[more]
XP_038905606.1	3.15e-102	92.95	thymocyte nuclear protein 1 [Benincasa hispida]	[more]
KAG7030934.1	2.29e-100	75.38	Thymocyte nuclear protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]

BLAST of IVF0024363 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G14660.1	1.5e-51	66.67	unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002740	EVE domain	PFAM	PF01878	EVE	coord: 56..185 e-value: 2.2E-38 score: 131.5
None	No IPR available	GENE3D	3.10.590.10	ph1033 like domains	coord: 54..195 e-value: 8.0E-43 score: 147.8
None	No IPR available	PANTHER	PTHR14087	THYMOCYTE NUCLEAR PROTEIN 1	coord: 46..193
IPR015947	PUA-like superfamily	SUPERFAMILY	88697	PUA domain-like	coord: 53..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0024363.1	IVF0024363.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus