IVF0024324 (gene) Melon (IVF77) v1

Overview
NameIVF0024324
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionMajor pollen allergen Ole e 6-like
Locationchr07: 21309840 .. 21310124 (-)
RNA-Seq ExpressionIVF0024324
SyntenyIVF0024324
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAAAACCAGTACGGTTGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACTGCTGAAAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAGCGTAATGCCTCAATTCAAATCATGTGTGGAAACCTGTGAGAAAGCATGCATCGCAAAAGACGGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGGTATCGTCTTGAATCTTTGA

mRNA sequence

ATGGCAAAAACCAGTACGGTTGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACTGCTGAAAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAGCGTAATGCCTCAATTCAAATCATGTGTGGAAACCTGTGAGAAAGCATGCATCGCAAAAGACGGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGGTATCGTCTTGAATCTTTGA

Coding sequence (CDS)

ATGGCAAAAACCAGTACGGTTGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACTGCTGAAAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAGCGTAATGCCTCAATTCAAATCATGTGTGGAAACCTGTGAGAAAGCATGCATCGCAAAAGACGGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGGTATCGTCTTGAATCTTTGA

Protein sequence

MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETCEKACIAKDGANTSCHSTCDKDCMKKEVVGIVLNL
Homology
BLAST of IVF0024324 vs. ExPASy TrEMBL
Match: A0A5A7SXV7 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13030G00010 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 4.6e-43
Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAKTSTVVFFMCIVVVVGSLQFSRADMTA+RDTEIEMRSKLLQSEISSVMPQFKSCVETC
Sbjct: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60

Query: 61 EKACIAKDGANTSCHSTCDKDCMKKEVVGIVLNL 95
          EKACIAKDGANTSCHSTCDKDCMKKEVVGIVLNL
Sbjct: 61 EKACIAKDGANTSCHSTCDKDCMKKEVVGIVLNL 94

BLAST of IVF0024324 vs. ExPASy TrEMBL
Match: A0A5A7T3F9 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold494G00090 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 7.5e-38
Identity = 83/88 (94.32%), Postives = 86/88 (97.73%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAK+ST+VFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEIS+VMPQFKSCVETC
Sbjct: 1  MAKSSTIVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60

Query: 61 EKACIAKDGANTSCHSTCDKDCMKKEVV 89
           KACIAKD ANTSCHSTCDKDCMKKEVV
Sbjct: 61 AKACIAKDSANTSCHSTCDKDCMKKEVV 88

BLAST of IVF0024324 vs. ExPASy TrEMBL
Match: A0A5A7TDR1 (Carotenoid cleavage dioxygenase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002630 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.9e-04
Identity = 36/93 (38.71%), Postives = 50/93 (53.76%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAK    VF MCI V+V +LQF+   +  E D   +  +K           ++KSC ETC
Sbjct: 1  MAKKMMAVFLMCI-VLVATLQFA---IAKEEDEVTKYEAKF--------DAKYKSCYETC 60

Query: 61 EKACIAK-DGANTSCHSTCDKDCMKKEVVGIVL 93
          EK C+ K +   + C   CD+DC +KE  GI+L
Sbjct: 61 EKECLQKGNNGQSFCEVKCDEDCSEKEAAGILL 81

BLAST of IVF0024324 vs. NCBI nr
Match: KAA0035393.1 (major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 182 bits (463), Expect = 6.82e-58
Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAKTSTVVFFMCIVVVVGSLQFSRADMTA+RDTEIEMRSKLLQSEISSVMPQFKSCVETC
Sbjct: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60

Query: 61 EKACIAKDGANTSCHSTCDKDCMKKEVVGIVLNL 94
          EKACIAKDGANTSCHSTCDKDCMKKEVVGIVLNL
Sbjct: 61 EKACIAKDGANTSCHSTCDKDCMKKEVVGIVLNL 94

BLAST of IVF0024324 vs. NCBI nr
Match: KAA0036015.1 (major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 165 bits (418), Expect = 5.84e-51
Identity = 83/88 (94.32%), Postives = 86/88 (97.73%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAK+ST+VFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEIS+VMPQFKSCVETC
Sbjct: 1  MAKSSTIVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60

Query: 61 EKACIAKDGANTSCHSTCDKDCMKKEVV 88
           KACIAKD ANTSCHSTCDKDCMKKEVV
Sbjct: 61 AKACIAKDSANTSCHSTCDKDCMKKEVV 88

BLAST of IVF0024324 vs. NCBI nr
Match: KAE8637567.1 (hypothetical protein CSA_017844, partial [Cucumis sativus])

HSP 1 Score: 77.0 bits (188), Expect = 7.89e-16
Identity = 41/89 (46.07%), Postives = 54/89 (60.67%), Query Frame = 0

Query: 3   KTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQ-SEISSVMPQFKSCVETCE 62
           K   VVFFMCIVV+ GSLQFS+A  TA    +++   K+   +E   + PQ +SCV TC 
Sbjct: 20  KNIMVVFFMCIVVM-GSLQFSKAQTTANMSPDLQAAEKIKSIAEGMKLWPQMESCVLTCR 79

Query: 63  KACIAKDGANTSCHSTCDKDCMKKEVVGI 90
           K C AK  AN SCH  C+ DC +K +  +
Sbjct: 80  KECDAKGNANASCHQKCNNDCTEKTIASV 107

BLAST of IVF0024324 vs. NCBI nr
Match: KAG6595593.1 (hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 67.0 bits (162), Expect = 3.88e-12
Identity = 41/87 (47.13%), Postives = 51/87 (58.62%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAK    V  MC V+VV +LQFS    TA++ TE+E + K   S+  +V  +FKSC  TC
Sbjct: 1  MAKKMMAVVLMC-VLVVSALQFS----TADKSTEMEAKFKSFFSDFGTVEAKFKSCAATC 60

Query: 61 EKACIAKDGANTSCHSTCDKDCMKKEV 87
          +K C      N SC S CD DC KKEV
Sbjct: 61 QKKC-----TNASCRSKCDADCGKKEV 77

BLAST of IVF0024324 vs. NCBI nr
Match: KAG6595587.1 (hypothetical protein SDJN03_12140, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 66.6 bits (161), Expect = 6.08e-12
Identity = 40/87 (45.98%), Postives = 50/87 (57.47%), Query Frame = 0

Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETC 60
          MAK    V  MC V++V +LQFS AD  AE    +E R K    ++S V  + KSC  TC
Sbjct: 1  MAKKMMAVLLMC-VLLVSALQFSTADSPAE----MEARFKSFFGDLSGVEAKLKSCAATC 60

Query: 61 EKACIAKDGANTSCHSTCDKDCMKKEV 87
          EK C+AK   + SC   C+ DC KKEV
Sbjct: 61 EKECVAKGETSESCKPKCNTDCGKKEV 82

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SXV74.6e-4398.94Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... [more]
A0A5A7T3F97.5e-3894.32Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... [more]
A0A5A7TDR11.9e-0438.71Carotenoid cleavage dioxygenase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
Match NameE-valueIdentityDescription
KAA0035393.16.82e-5898.94major pollen allergen Ole e 6-like [Cucumis melo var. makuwa][more]
KAA0036015.15.84e-5194.32major pollen allergen Ole e 6-like [Cucumis melo var. makuwa][more]
KAE8637567.17.89e-1646.07hypothetical protein CSA_017844, partial [Cucumis sativus][more]
KAG6595593.13.88e-1247.13hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6595587.16.08e-1245.98hypothetical protein SDJN03_12140, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036466Pollen allergen ole e 6 superfamilyGENE3D1.10.287.720Pollen allergen ole e 6coord: 51..93
e-value: 4.7E-10
score: 40.8
IPR036466Pollen allergen ole e 6 superfamilySUPERFAMILY111388Pollen allergen ole e 6coord: 52..88

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0024324.2IVF0024324.2mRNA