IVF0024315 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAACAGTTCAGCCACTTTCAAATGGGTTTCTGAGATTACTCAAGAGGTGGGGTTTTTATTAATTTGCTAAATTTTGATTTCTTCTTCTTCTTCTTCTTTGTTTTTTGCATGTGACTTTTGATCCATTTTTGCATTGATTTTTTGATTAGATTTTCAGCTGTTTTAGAGCTCAGCGATTAACAATGTCGTGTTCTTTCGAGTTCTGTCAGATTGTTGTTTACAATTATTATGAGGAATTAATTATAGTTCATTTTGATTCATTTGAGTGCTAAGGTTTCTTCTAAACAGTTAAATTTTATATTTCCTGAGCTTAATTGAGCTGAGTTGTTGTTGTTATCCTAAACAGGATGTTACGGTTGTCCCATTTTGGGGGAATTTTCTTTATCTTTCTACTGTTGGTACTTTGTAGATCTTGAACAGTGTATCAAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATTATATATATATATATACCAAAAAGAATAAAGCTCATGTATATCAACTATAGATCTAGATTGTCCAGATTTTTTGCACAATGTTTAATCGCTAAGCATGGCAAGTCTATCTAATAATCTTGGATACTCTCTTATTTTCATCTTATTTGAATAATTATAAATCTAAACTGAAATAGGGTCTGAATGAATGGATGTTTGGGAAATTTTCAATATGATGCTTCGGCACGTGGGCTTATTCTCGTTCCTGGGCGGGTGACAAAGTGGTGGGATGCCTTTGCCATGGATTGACTCACTTAGGCCTCCCCTCCACAAGAGATTAGTTGAGGTGGCCGCCAGAATATGGCTTGTACTATTGTATTTATGAGAGAGAAATTGTAAAAGTACATCGAATTTATATTTCGTGATGCTCAGAGGAGTTTGAGTTTGTTGTGCTTGACTTCCTATATAAAACATTAGAAGAATAATGTTACTTTTGCAAGTCCCTTCAGGGGCATCTGATAAAATTGGAACATTACATAGAAGATTAGCATGGCCCCTGCTCAAGGATGGCACGCACAAATCAAGAAATAATGTTATTTTTGCAAACAGCTAGCCAAACATTGAGGTCTTGTTGTCAGGAGTTGATTGGCAGGCATTCGTAGAGTTACTTGGCTGCATTTTTTTTGGTAAAATAACAAATTTATATTAACATTCCTTGAGGTGAACTTGGGAGTGGATCCATTGACAAATGAAGAACTGGATTACTAAAGATAAGTGAAATATGAAATGCTTTATCTGAGATGTCATTCATATCCTTTCTCTAAAGACTTTTCCTTTGTGAGTTTTTTTTCTCTGTATATTATTGAACTGCTTAGATCGTCAATGCATTTAACTTGAATTTGTATCTGATTGTTTGTTATAAGCAGGAAGACACCGAGATTGTAAAATCTGTAAATGAACAAACTTCAGATACTGGACATAGTAGTAGACGGCCTGATATTTCACTTCAAATACCCCCGAGATCGACAGGCTTTGGTAAAAGCCGTAGTGGAAAAGGTTTACTGCAATCTCAAGGTTCCAACAAAGGTGGTTTATCTCCAGGAAGCTTCTTAAGGGCTTTAAGCTTTAAGAGGAAAGGCATTGCTCCTGAAGGTGAGAAAAGTTCACTCCTAAGTTCAGACCCAAAGACAGCTGCTGAAAGTTCGATATCGACAATTGCTTCAGCCTTTTCGTGGAAAAAGTCCACCTCTCTCCCAGTAACTCCTGCATCAAACTTGTCCCCCTTGATTCCCCTCCCCGCCACAACTAGTACGGTCGTTGAAAAGCCAATCCCACATGTGAGTTATCTCTGTTACAAAGTTCCATTGAGTTTCGTCATACAAAAACCCGTTAAGTTTTTAATTACATAACTCGTTGGATAAGGCCGCAATTGTACGACCTATAAAACAAATCTCGTTCATTCAAGTAAGGTCGTTACTTGTTACTTAACTCCTTTCAACCACAGTGAAAAATGTTTACTACAATGCTACTTTACAAGATCTGTAACTTTGTCTTTCTTTTCTTATCTCCAACAGAAAGAAGCAGTGCGTGCAGTTTCGAGATCTCTATCTGTGCCCGTAAGAAATATCGTTATAGTACGATCTACATCTTTTGCTACCCCTAGGGCAATTTCTGAGGCCAGTGCCAGTTCTGGTATAAGTCCAAAAACCCTACTATTAGTTCACTTTACCCTTTTTGCTTTGCATCCCATAGAATCTGAGGCATGGTTTTATTACATATTACAGTTTTTTTGTATAGTATATATTAGATCCTTTAAGTTTTTAATAATTATAGTATTGGTCATGTGAGTGATTTTCATATTTAATCTTTTGAATCAAGTATTTATTTTCACCATAAAAGGGTGATGCATGAATTTTGAAAAGATATTTCATATTTTTCTTTTATGAGGCTGTCGCTAGAATTTTTAATTAGTTCATTTTCTAATCCCAACCAAAATAGTATGGTCAAGTCATGTAAAATGGGTAAGTTTTCAATTTTACCGGCGAACATTGTCTATTTCATAAAAATAAAATAGAGGATATATTTAAATTAACAAAATGTGCTTTAATGTCACATCATTATTTAGTTAGATAAGGATTTGAATAGAAAAGAAGGTTAAATACGAGTTTAGTCTTGAACTACAAGGTTTGTGTCTATTTGATCCCAGACTTTCAAAGTGTGGAATAGGTCCCTAAATGTTTAATTTTTATGTCTAATGGAACCTTCTGCAATCAATTTTGAATATGATAAATTCGTGAATTTCAAAATTTTCAAAAGTTCACGGGTTAAATCAATAATTTGAAAGTTCAATGACCAAATAGATACAAACTTCAAAGGTCATGGACTAAATTTGTAAGTTAACCAAAAAAGAAATTGATGTCGAAAATAATGAGACCAAAACTTTTGAAAGATTAGAGCCTAATTCTGAAGTTTACACGAACATTAGGGATGATTATATATTGAACCTTATGCAAATTTTTACATGTGACAGATCAGGCTGGTTCTGTTACCTTAGAAAATGATGATGAAGAAATTCCTGAAGAGGAAGCAGTTTGTAGAATCTGTCTCGATCCATGTGAAGAAGAAAACACTCTTAAAATGGAATGCAGTTGCAAAGGAGCCCTTAGGCTTGTACATAAAGATTGTGCAATAGAATGGTTTAGTATAAGAGGAAGCAAGGTGTGTGAAGTTTGTAGGCAGGAAGTACAGAATTTACCCGTCACACTACTCCGCATTCCAACCACTGCTCAACAGGACGGAAGACAGTTGCAAAATCAACTGACGTTTCGTTCACGGACAATAAGGTATTACAGCAGCTTGTCATGATTTGGCTTTTTAATGAAGGATTCTGTTATTCAACCAAACCATTTCTGATTTTAACGACGTTTGAAAACTTCCCTCTCGTTTACCATTTTTCATCTATCATACTTGGCCGAAACTGTACTAATTTCTGTGTATGTTGCAGTGTTTGGCAAGACTTTGTGGTGCTCGTTTTAATCAGCACAATATGCTATTTCTTCTTCCTTGAGCAGCTCCTGGTATGCCATTTGCTACGGAAGAGGAAATTGTTTGAATTTCTTTCAACTTGAACTTCTTTAGGATTTATATGGATTCTTTTTTGCTTGATATTCTCCACATCGTGTTTGGTTTTCAATATTGTTCAATTGAACTAATAATATTGTGTTTTTGCCTTCTGATTGTTTGTTTTAGATTCACGACTTGAAGACTCAAGCTATTGTTTATGCTGCACCTTTTGCACTGGTGTTTGGTCTCACATCATCGATATTCTCTGTCATCCTCGGTATAGATTTCTGTAAAACTTTAGGCTTCGCTTGAGAACTGTATTTTTAAATTTATAAACACGACTCTTTCTTATAGTTTCTCTAGTCTTATTACCTAATATTTGAAAATGTTCAAGAAAAAAAAAGCCAAATTTTGAAAACTAGAAAGTAATTTTTTCTTTTTGAAATTTGACTTAGAATTCAAATGTGTCTTTTAAGTTTGATGAAAAAACTTACCACAAAATTATGAGGAAATCGACATAATTTTTTAGAACAGAGAACCAAAACCAGCTGGTTATTAAACTGAACCTTAAACATTTTCTTTCTTTACTCATTTATGAATCTCAGTATTTGCCTATTTGCATAACTTTGCAGCAATCAGGGAGTACATATGGACTTATGCAGCTCTTGAGTTTGCACTTGTAGCTATTATTCTTCACCTTTTCTATACTTTGGTGAGTAAAATTTTCATGCATTAGACAGCACAATTTTATTCTGATTACTATGAAAGAAATCCAATCTCAAAGACCAACCCTTGTTTATGAAGGGTTACGCCCATACTCCACGGTAACCGTTAGGCACCTCATTAAGAAAGCATTTGGATAATCAGACATTAGTTTGATTGGTAGCAAGGGGTATTTGAGTAATTAGACATTAAGTTTGTTAGGTATTTTGAGTTATAAAACAGCAGGAGAGCATGGCTAGAGGCGTAGGTGTAGAGAATTTGAGTGAGCTTCGGCTCTTTGGGAGAGGATCCTCGGCCCAACCAGCGGATTAGTTCATTTTTCTTGGTGTTCGTATTGTTTTCTCTGTGCTTTTCATCTTGTAATTGTTGTGGTTTCCTGCGAGACTTGCTCTGTGAGTTATGGATATTTAGTACTTTTTGGGATTTTTTTGTTTGTAGAAAGAAGAATCCTAACAGCTTCTTTGTATGTGCTCCAAAGCATCAAAGCTAACTCACTAATAAACAAAAACTATTTTAAATCGACCCGAAAAATTTAGGGCCTGTATTTAAGGGTTTACATCAGCTCGGTTTGTCAAAACTAAAGAGGAAAAATTCAAATGTGATTGACTCAAGAAAAGTATTAAGCTTTCTTGTTTTCTAAATTATGTTGACAAACTTTTGGCCTTGTTTGCAGCTGAAACTGAAGGCCATATATGCCATTTTGCTGTCTGCAATCTTGGGTTTTGGTGTGGCTATGAGCTTGAATGCTGTATACATTCATTACTACATTTGGCGAATTCGAATCGCTCAGAATCCCAACCAAGTATGA ATGGCAACAGTTCAGCCACTTTCAAATGGGTTTCTGAGATTACTCAAGAGGTGGGACACCGAGATTGTAAAATCTGTAAATGAACAAACTTCAGATACTGGACATAGTAGTAGACGGCCTGATATTTCACTTCAAATACCCCCGAGATCGACAGGCTTTGGTAAAAGCCGTAGTGGAAAAGGTTTACTGCAATCTCAAGGTTCCAACAAAGGTGGTTTATCTCCAGGAAGCTTCTTAAGGGCTTTAAGCTTTAAGAGGAAAGGCATTGCTCCTGAAGGTGAGAAAAGTTCACTCCTAAGTTCAGACCCAAAGACAGCTGCTGAAAGTTCGATATCGACAATTGCTTCAGCCTTTTCGTGGAAAAAGTCCACCTCTCTCCCAGTAACTCCTGCATCAAACTTGTCCCCCTTGATTCCCCTCCCCGCCACAACTAGTACGGTCGTTGAAAAGCCAATCCCACATAAAGAAGCAGTGCGTGCAGTTTCGAGATCTCTATCTGTGCCCGTAAGAAATATCGTTATAGTACGATCTACATCTTTTGCTACCCCTAGGGCAATTTCTGAGGCCAGTGCCAGTTCTGATCAGGCTGGTTCTGTTACCTTAGAAAATGATGATGAAGAAATTCCTGAAGAGGAAGCAGTTTGTAGAATCTGTCTCGATCCATGTGAAGAAGAAAACACTCTTAAAATGGAATGCAGTTGCAAAGGAGCCCTTAGGCTTGTACATAAAGATTGTGCAATAGAATGGTTTAGTATAAGAGGAAGCAAGGTGTGTGAAGTTTGTAGGCAGGAAGTACAGAATTTACCCGTCACACTACTCCGCATTCCAACCACTGCTCAACAGGACGGAAGACAGTTGCAAAATCAACTGACGTTTCGTTCACGGACAATAAGTGTTTGGCAAGACTTTGTGGTGCTCGTTTTAATCAGCACAATATGCTATTTCTTCTTCCTTGAGCAGCTCCTGATTCACGACTTGAAGACTCAAGCTATTGTTTATGCTGCACCTTTTGCACTGGTGTTTGGTCTCACATCATCGATATTCTCTGTCATCCTCGCAATCAGGGAGTACATATGGACTTATGCAGCTCTTGAGTTTGCACTTGTAGCTATTATTCTTCACCTTTTCTATACTTTGCTGAAACTGAAGGCCATATATGCCATTTTGCTGTCTGCAATCTTGGGTTTTGGTGTGGCTATGAGCTTGAATGCTGTATACATTCATTACTACATTTGGCGAATTCGAATCGCTCAGAATCCCAACCAAGTATGA ATGGCAACAGTTCAGCCACTTTCAAATGGGTTTCTGAGATTACTCAAGAGGTGGGACACCGAGATTGTAAAATCTGTAAATGAACAAACTTCAGATACTGGACATAGTAGTAGACGGCCTGATATTTCACTTCAAATACCCCCGAGATCGACAGGCTTTGGTAAAAGCCGTAGTGGAAAAGGTTTACTGCAATCTCAAGGTTCCAACAAAGGTGGTTTATCTCCAGGAAGCTTCTTAAGGGCTTTAAGCTTTAAGAGGAAAGGCATTGCTCCTGAAGGTGAGAAAAGTTCACTCCTAAGTTCAGACCCAAAGACAGCTGCTGAAAGTTCGATATCGACAATTGCTTCAGCCTTTTCGTGGAAAAAGTCCACCTCTCTCCCAGTAACTCCTGCATCAAACTTGTCCCCCTTGATTCCCCTCCCCGCCACAACTAGTACGGTCGTTGAAAAGCCAATCCCACATAAAGAAGCAGTGCGTGCAGTTTCGAGATCTCTATCTGTGCCCGTAAGAAATATCGTTATAGTACGATCTACATCTTTTGCTACCCCTAGGGCAATTTCTGAGGCCAGTGCCAGTTCTGATCAGGCTGGTTCTGTTACCTTAGAAAATGATGATGAAGAAATTCCTGAAGAGGAAGCAGTTTGTAGAATCTGTCTCGATCCATGTGAAGAAGAAAACACTCTTAAAATGGAATGCAGTTGCAAAGGAGCCCTTAGGCTTGTACATAAAGATTGTGCAATAGAATGGTTTAGTATAAGAGGAAGCAAGGTGTGTGAAGTTTGTAGGCAGGAAGTACAGAATTTACCCGTCACACTACTCCGCATTCCAACCACTGCTCAACAGGACGGAAGACAGTTGCAAAATCAACTGACGTTTCGTTCACGGACAATAAGTGTTTGGCAAGACTTTGTGGTGCTCGTTTTAATCAGCACAATATGCTATTTCTTCTTCCTTGAGCAGCTCCTGATTCACGACTTGAAGACTCAAGCTATTGTTTATGCTGCACCTTTTGCACTGGTGTTTGGTCTCACATCATCGATATTCTCTGTCATCCTCGCAATCAGGGAGTACATATGGACTTATGCAGCTCTTGAGTTTGCACTTGTAGCTATTATTCTTCACCTTTTCTATACTTTGCTGAAACTGAAGGCCATATATGCCATTTTGCTGTCTGCAATCTTGGGTTTTGGTGTGGCTATGAGCTTGAATGCTGTATACATTCATTACTACATTTGGCGAATTCGAATCGCTCAGAATCCCAACCAAGTATGA MATVQPLSNGFLRLLKRWDTEIVKSVNEQTSDTGHSSRRPDISLQIPPRSTGFGKSRSGKGLLQSQGSNKGGLSPGSFLRALSFKRKGIAPEGEKSSLLSSDPKTAAESSISTIASAFSWKKSTSLPVTPASNLSPLIPLPATTSTVVEKPIPHKEAVRAVSRSLSVPVRNIVIVRSTSFATPRAISEASASSDQAGSVTLENDDEEIPEEEAVCRICLDPCEEENTLKMECSCKGALRLVHKDCAIEWFSIRGSKVCEVCRQEVQNLPVTLLRIPTTAQQDGRQLQNQLTFRSRTISVWQDFVVLVLISTICYFFFLEQLLIHDLKTQAIVYAAPFALVFGLTSSIFSVILAIREYIWTYAALEFALVAIILHLFYTLLKLKAIYAILLSAILGFGVAMSLNAVYIHYYIWRIRIAQNPNQV Homology
BLAST of IVF0024315 vs. ExPASy Swiss-Prot
Match: F4JKK0 (Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis thaliana OX=3702 GN=SUD1 PE=1 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 9.9e-10 Identity = 32/94 (34.04%), Postives = 52/94 (55.32%), Query Frame = 0
BLAST of IVF0024315 vs. ExPASy Swiss-Prot
Match: P40318 (ERAD-associated E3 ubiquitin-protein ligase DOA10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SSM4 PE=1 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 3.6e-04 Identity = 18/62 (29.03%), Postives = 32/62 (51.61%), Query Frame = 0
BLAST of IVF0024315 vs. ExPASy Swiss-Prot
Match: Q32L65 (E3 ubiquitin-protein ligase MARCHF2 OS=Bos taurus OX=9913 GN=MARCHF2 PE=2 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 8.1e-04 Identity = 26/91 (28.57%), Postives = 41/91 (45.05%), Query Frame = 0
BLAST of IVF0024315 vs. ExPASy TrEMBL
Match: A0A1S3C838 (E3 ubiquitin-protein ligase MARCH7 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497891 PE=4 SV=1) HSP 1 Score: 770.8 bits (1989), Expect = 3.0e-219 Identity = 415/423 (98.11%), Postives = 417/423 (98.58%), Query Frame = 0
BLAST of IVF0024315 vs. ExPASy TrEMBL
Match: A0A5A7SWB1 (E3 ubiquitin-protein ligase MARCH7 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G001160 PE=4 SV=1) HSP 1 Score: 751.9 bits (1940), Expect = 1.4e-213 Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0
BLAST of IVF0024315 vs. ExPASy TrEMBL
Match: A0A1S3C800 (uncharacterized protein LOC103497891 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497891 PE=4 SV=1) HSP 1 Score: 751.9 bits (1940), Expect = 1.4e-213 Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0
BLAST of IVF0024315 vs. ExPASy TrEMBL
Match: A0A0A0KEI7 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G067930 PE=4 SV=1) HSP 1 Score: 744.6 bits (1921), Expect = 2.3e-211 Identity = 398/421 (94.54%), Postives = 408/421 (96.91%), Query Frame = 0
BLAST of IVF0024315 vs. ExPASy TrEMBL
Match: A0A6J1ER12 (uncharacterized protein LOC111436767 OS=Cucurbita moschata OX=3662 GN=LOC111436767 PE=4 SV=1) HSP 1 Score: 627.9 bits (1618), Expect = 3.1e-176 Identity = 337/424 (79.48%), Postives = 376/424 (88.68%), Query Frame = 0
BLAST of IVF0024315 vs. NCBI nr
Match: XP_008458500.1 (PREDICTED: E3 ubiquitin-protein ligase MARCH7 isoform X1 [Cucumis melo] >XP_008458501.1 PREDICTED: E3 ubiquitin-protein ligase MARCH7 isoform X1 [Cucumis melo]) HSP 1 Score: 770 bits (1989), Expect = 1.33e-279 Identity = 415/423 (98.11%), Postives = 417/423 (98.58%), Query Frame = 0
BLAST of IVF0024315 vs. NCBI nr
Match: XP_008458502.1 (PREDICTED: uncharacterized protein LOC103497891 isoform X2 [Cucumis melo] >KAA0033455.1 E3 ubiquitin-protein ligase MARCH7 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 751 bits (1940), Expect = 3.88e-272 Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0
BLAST of IVF0024315 vs. NCBI nr
Match: XP_011656659.1 (uncharacterized protein LOC101219282 isoform X2 [Cucumis sativus] >KGN46186.1 hypothetical protein Csa_005031 [Cucumis sativus]) HSP 1 Score: 744 bits (1921), Expect = 3.04e-269 Identity = 398/421 (94.54%), Postives = 408/421 (96.91%), Query Frame = 0
BLAST of IVF0024315 vs. NCBI nr
Match: XP_011656658.1 (uncharacterized protein LOC101219282 isoform X1 [Cucumis sativus]) HSP 1 Score: 725 bits (1872), Expect = 9.55e-262 Identity = 388/403 (96.28%), Postives = 396/403 (98.26%), Query Frame = 0
BLAST of IVF0024315 vs. NCBI nr
Match: XP_038906457.1 (uncharacterized protein LOC120092441 [Benincasa hispida]) HSP 1 Score: 717 bits (1850), Expect = 1.99e-258 Identity = 383/423 (90.54%), Postives = 400/423 (94.56%), Query Frame = 0
BLAST of IVF0024315 vs. TAIR 10
Match: AT3G06330.1 (RING/U-box superfamily protein ) HSP 1 Score: 375.9 bits (964), Expect = 4.1e-104 Identity = 218/402 (54.23%), Postives = 284/402 (70.65%), Query Frame = 0
BLAST of IVF0024315 vs. TAIR 10
Match: AT3G06330.2 (RING/U-box superfamily protein ) HSP 1 Score: 318.5 bits (815), Expect = 7.9e-87 Identity = 162/257 (63.04%), Postives = 204/257 (79.38%), Query Frame = 0
BLAST of IVF0024315 vs. TAIR 10
Match: AT5G18760.1 (RING/U-box superfamily protein ) HSP 1 Score: 300.1 bits (767), Expect = 2.9e-81 Identity = 197/400 (49.25%), Postives = 253/400 (63.25%), Query Frame = 0
BLAST of IVF0024315 vs. TAIR 10
Match: AT3G06330.3 (RING/U-box superfamily protein ) HSP 1 Score: 290.0 bits (741), Expect = 3.0e-78 Identity = 176/336 (52.38%), Postives = 227/336 (67.56%), Query Frame = 0
BLAST of IVF0024315 vs. TAIR 10
Match: AT5G60580.1 (RING/U-box superfamily protein ) HSP 1 Score: 198.4 bits (503), Expect = 1.2e-50 Identity = 159/435 (36.55%), Postives = 237/435 (54.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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