IVF0024300 (gene) Melon (IVF77) v1

Overview
NameIVF0024300
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionEnvelope-like protein
Locationchr04: 4495299 .. 4495532 (-)
RNA-Seq ExpressionIVF0024300
SyntenyIVF0024300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACAACGATTCAACGATTTGTTGAGGGAGAACACACAACCAAATAGGAAGAATACACCGAAAGAGGGAGAACACACAACCAAAGAGGGAGATTTAAGGGGATTTGATAAGGGAGAACACAGAACGAAGGGGAAAAGGGTTTCGCACAAACACGGGTTTAGGGGAAAGCCTAAACACAGGTTGAAGACGATAAGGCAGGAAGAGAGTTTCGACCGTTTGAGGGGAGAATGA

mRNA sequence

ATGAAACAACGATTCAACGATTTGTTGAGGGAGAACACACAACCAAATAGGAAGAATACACCGAAAGAGGGAGAACACACAACCAAAGAGGGAGATTTAAGGGGATTTGATAAGGGAGAACACAGAACGAAGGGGAAAAGGGTTTCGCACAAACACGGGTTTAGGGGAAAGCCTAAACACAGGTTGAAGACGATAAGGCAGGAAGAGAGTTTCGACCGTTTGAGGGGAGAATGA

Coding sequence (CDS)

ATGAAACAACGATTCAACGATTTGTTGAGGGAGAACACACAACCAAATAGGAAGAATACACCGAAAGAGGGAGAACACACAACCAAAGAGGGAGATTTAAGGGGATTTGATAAGGGAGAACACAGAACGAAGGGGAAAAGGGTTTCGCACAAACACGGGTTTAGGGGAAAGCCTAAACACAGGTTGAAGACGATAAGGCAGGAAGAGAGTTTCGACCGTTTGAGGGGAGAATGA

Protein sequence

MKQRFNDLLRENTQPNRKNTPKEGEHTTKEGDLRGFDKGEHRTKGKRVSHKHGFRGKPKHRLKTIRQEESFDRLRGE
Homology
BLAST of IVF0024300 vs. ExPASy TrEMBL
Match: A0A5A7TF63 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G001080 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.2e-25
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0

Query: 1  MKQRFNDLLRENTQPNRKNTPKEGEHTTKEGDLRGFDKGEHRTKGKRVSHKHGFRGKPKH 60
          MKQRFNDLLRENTQPNRKNTPKEGEHTTKEGDLRGFDKGEHRTKGKRVSHKHGFRGKPKH
Sbjct: 1  MKQRFNDLLRENTQPNRKNTPKEGEHTTKEGDLRGFDKGEHRTKGKRVSHKHGFRGKPKH 60

Query: 61 R 62
          R
Sbjct: 61 R 61

BLAST of IVF0024300 vs. ExPASy TrEMBL
Match: A0A5D3C0R8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G00590 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 5.4e-10
Identity = 35/48 (72.92%), Postives = 39/48 (81.25%), Query Frame = 0

Query: 20 TPKEGEHTTKEGDLRGFDKGEHRTKGKRVSHKHGFRGKPKHRLKTIRQ 68
          +P  G  + KEGDLRGFD GEHRTKGKRVSH+HG RGKP+H LKT RQ
Sbjct: 7  SPNNGTSSNKEGDLRGFDDGEHRTKGKRVSHEHGLRGKPEHGLKTTRQ 54

BLAST of IVF0024300 vs. ExPASy TrEMBL
Match: A0A5A7U0L7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00090 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.1e-09
Identity = 37/52 (71.15%), Postives = 42/52 (80.77%), Query Frame = 0

Query: 15 PNRKNTPKEGEHTTKEGDLRGFDKGEHRTKGKRVSHKHGFRGKPKHRLKTIR 67
          P+R N    G  + KEGDLR FD+GEHRTKGKRVSH+HG RGKP+HRLKTIR
Sbjct: 6  PSRNN----GTSSAKEGDLRRFDEGEHRTKGKRVSHEHGLRGKPEHRLKTIR 53

BLAST of IVF0024300 vs. ExPASy TrEMBL
Match: A0A5D3BPU2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G00950 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.1e-09
Identity = 37/52 (71.15%), Postives = 42/52 (80.77%), Query Frame = 0

Query: 15 PNRKNTPKEGEHTTKEGDLRGFDKGEHRTKGKRVSHKHGFRGKPKHRLKTIR 67
          P+R N    G  + KEGDLR FD+GEHRTKGKRVSH+HG RGKP+HRLKTIR
Sbjct: 6  PSRNN----GTSSAKEGDLRRFDEGEHRTKGKRVSHEHGLRGKPEHRLKTIR 53

BLAST of IVF0024300 vs. ExPASy TrEMBL
Match: A0A5A7V6A8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5168G00010 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.5e-09
Identity = 37/54 (68.52%), Postives = 42/54 (77.78%), Query Frame = 0

Query: 15 PNRKNTPKEGEHTTKEGDLRGFDKGEHRTKGKRVSHKHGFRGKPKHRLKTIRQE 69
          P+R N    G  + KEGDLRGFD+GEHR KGK VSH+HG RGKP+H LKTIRQE
Sbjct: 6  PSRNN----GTSSDKEGDLRGFDEGEHRMKGKSVSHEHGLRGKPEHGLKTIRQE 55

BLAST of IVF0024300 vs. NCBI nr
Match: KAA0041548.1 (envelope-like protein [Cucumis melo var. makuwa] >TYK19706.1 envelope-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 123 bits (308), Expect = 4.32e-34
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0

Query: 1  MKQRFNDLLRENTQPNRKNTPKEGEHTTKEGDLRGFDKGEHRTKGKRVSHKHGFRGKPKH 60
          MKQRFNDLLRENTQPNRKNTPKEGEHTTKEGDLRGFDKGEHRTKGKRVSHKHGFRGKPKH
Sbjct: 1  MKQRFNDLLRENTQPNRKNTPKEGEHTTKEGDLRGFDKGEHRTKGKRVSHKHGFRGKPKH 60

BLAST of IVF0024300 vs. NCBI nr
Match: TYK04868.1 (hypothetical protein E5676_scaffold143G00590 [Cucumis melo var. makuwa])

HSP 1 Score: 72.0 bits (175), Expect = 1.10e-14
Identity = 35/48 (72.92%), Postives = 39/48 (81.25%), Query Frame = 0

Query: 20 TPKEGEHTTKEGDLRGFDKGEHRTKGKRVSHKHGFRGKPKHRLKTIRQ 67
          +P  G  + KEGDLRGFD GEHRTKGKRVSH+HG RGKP+H LKT RQ
Sbjct: 7  SPNNGTSSNKEGDLRGFDDGEHRTKGKRVSHEHGLRGKPEHGLKTTRQ 54

BLAST of IVF0024300 vs. NCBI nr
Match: TYK01078.1 (hypothetical protein E5676_scaffold264G00950 [Cucumis melo var. makuwa])

HSP 1 Score: 70.1 bits (170), Expect = 6.34e-14
Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 0

Query: 24 GEHTTKEGDLRGFDKGEHRTKGKRVSHKHGFRGKPKHRLKTIR 66
          G  + KEGDLR FD+GEHRTKGKRVSH+HG RGKP+HRLKTIR
Sbjct: 11 GTSSAKEGDLRRFDEGEHRTKGKRVSHEHGLRGKPEHRLKTIR 53

BLAST of IVF0024300 vs. NCBI nr
Match: KAA0047776.1 (hypothetical protein E6C27_scaffold133G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 70.1 bits (170), Expect = 6.34e-14
Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 0

Query: 24 GEHTTKEGDLRGFDKGEHRTKGKRVSHKHGFRGKPKHRLKTIR 66
          G  + KEGDLR FD+GEHRTKGKRVSH+HG RGKP+HRLKTIR
Sbjct: 11 GTSSAKEGDLRRFDEGEHRTKGKRVSHEHGLRGKPEHRLKTIR 53

BLAST of IVF0024300 vs. NCBI nr
Match: KAA0061239.1 (hypothetical protein E6C27_scaffold455G00740 [Cucumis melo var. makuwa] >TYJ99958.1 hypothetical protein E5676_scaffold5168G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 69.3 bits (168), Expect = 1.28e-13
Identity = 34/45 (75.56%), Postives = 38/45 (84.44%), Query Frame = 0

Query: 24 GEHTTKEGDLRGFDKGEHRTKGKRVSHKHGFRGKPKHRLKTIRQE 68
          G  + KEGDLRGFD+GEHR KGK VSH+HG RGKP+H LKTIRQE
Sbjct: 11 GTSSDKEGDLRGFDEGEHRMKGKSVSHEHGLRGKPEHGLKTIRQE 55

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TF631.2e-25100.00Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold24... [more]
A0A5D3C0R85.4e-1072.92Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U0L72.1e-0971.15Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BPU22.1e-0971.15Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V6A83.5e-0968.52Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0041548.14.32e-34100.00envelope-like protein [Cucumis melo var. makuwa] >TYK19706.1 envelope-like prote... [more]
TYK04868.11.10e-1472.92hypothetical protein E5676_scaffold143G00590 [Cucumis melo var. makuwa][more]
TYK01078.16.34e-1479.07hypothetical protein E5676_scaffold264G00950 [Cucumis melo var. makuwa][more]
KAA0047776.16.34e-1479.07hypothetical protein E6C27_scaffold133G00090 [Cucumis melo var. makuwa][more]
KAA0061239.11.28e-1375.56hypothetical protein E6C27_scaffold455G00740 [Cucumis melo var. makuwa] >TYJ9995... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..77

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0024300.1IVF0024300.1mRNA