IVF0024265 (gene) Melon (IVF77) v1

Overview


Name	IVF0024265
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	17.8 kDa class I heat shock protein-like
Location	chr10: 7765204 .. 7765966 (+)
RNA-Seq Expression	IVF0024265
Synteny	IVF0024265

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAAGGAAATTAAAAAGCAAGAAAAGCCTAGAAATATCTCCAACCATATCATAAGTCGTCGACAACAACAACAAAACCTCACATTCTTTCCCCAACTTTTACAGCTTCAATTTATCATTCTTTTTTCCCATCACGCTAACTTATTTCAACGGTCAAACTAAAACCATGTCGCTGATTCCAAGCATTTTTGGTGGCCGACGAAGCAACATGTTCGACCCCTTTTCATCGGATGTTTGGGATCCGTTCGAAGGCTTCCCATTTTCAAACTCATTGGCCAATGTCCCTTCATCTGCTTTTTCCAACACTCGCATCGATTGGAAAGAAACCCCAGAAGCCCATATCTTCAAGGCTGATCTTCCCGGAATCAAGAAGGAAGATGTCAAAGTAGAAGTGGAAGAAGGCAGAGTTTTGCAAATCAGTGGCGAGAGGAGCAAAGAGCAGGAAGAGAAGAATGATAAATGGCATAGAATTGAACGAAGCAGTGGAAAGTTCGAGAGGAGATTTAGGCTGCCTGAGAATGCTAAAGTTGAGGAGGTGAAGGCCAACATGGAGAACGGAGTGCTGACAGTGACGGTGCCTAAAATGGAGAAGAAGCCTGAGGTCAACTCCATCGACATCTCTGGTTAAAGTTGAATCTCTGATATTTGTGTGAATGCTTTGTTTGGGTTGATGTGGTTAGTAAATGACTTAAAAATGTATTTTATGGAACTATTGAGTGTCAAAACAGTTCGATTGTTTACTTTTTGTATTATATTATCGTGGG

mRNA sequence

TTAAGGAAATTAAAAAGCAAGAAAAGCCTAGAAATATCTCCAACCATATCATAAGTCGTCGACAACAACAACAAAACCTCACATTCTTTCCCCAACTTTTACAGCTTCAATTTATCATTCTTTTTTCCCATCACGCTAACTTATTTCAACGGTCAAACTAAAACCATGTCGCTGATTCCAAGCATTTTTGGTGGCCGACGAAGCAACATGTTCGACCCCTTTTCATCGGATGTTTGGGATCCGTTCGAAGGCTTCCCATTTTCAAACTCATTGGCCAATGTCCCTTCATCTGCTTTTTCCAACACTCGCATCGATTGGAAAGAAACCCCAGAAGCCCATATCTTCAAGGCTGATCTTCCCGGAATCAAGAAGGAAGATGTCAAAGTAGAAGTGGAAGAAGGCAGAGTTTTGCAAATCAGTGGCGAGAGGAGCAAAGAGCAGGAAGAGAAGAATGATAAATGGCATAGAATTGAACGAAGCAGTGGAAAGTTCGAGAGGAGATTTAGGCTGCCTGAGAATGCTAAAGTTGAGGAGGTGAAGGCCAACATGGAGAACGGAGTGCTGACAGTGACGGTGCCTAAAATGGAGAAGAAGCCTGAGGTCAACTCCATCGACATCTCTGGTTAAAGTTGAATCTCTGATATTTGTGTGAATGCTTTGTTTGGGTTGATGTGGTTAGTAAATGACTTAAAAATGTATTTTATGGAACTATTGAGTGTCAAAACAGTTCGATTGTTTACTTTTTGTATTATATTATCGTGGG

Coding sequence (CDS)

ATGTCGCTGATTCCAAGCATTTTTGGTGGCCGACGAAGCAACATGTTCGACCCCTTTTCATCGGATGTTTGGGATCCGTTCGAAGGCTTCCCATTTTCAAACTCATTGGCCAATGTCCCTTCATCTGCTTTTTCCAACACTCGCATCGATTGGAAAGAAACCCCAGAAGCCCATATCTTCAAGGCTGATCTTCCCGGAATCAAGAAGGAAGATGTCAAAGTAGAAGTGGAAGAAGGCAGAGTTTTGCAAATCAGTGGCGAGAGGAGCAAAGAGCAGGAAGAGAAGAATGATAAATGGCATAGAATTGAACGAAGCAGTGGAAAGTTCGAGAGGAGATTTAGGCTGCCTGAGAATGCTAAAGTTGAGGAGGTGAAGGCCAACATGGAGAACGGAGTGCTGACAGTGACGGTGCCTAAAATGGAGAAGAAGCCTGAGGTCAACTCCATCGACATCTCTGGTTAA

Protein sequence

MSLIPSIFGGRRSNMFDPFSSDVWDPFEGFPFSNSLANVPSSAFSNTRIDWKETPEAHIFKADLPGIKKEDVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFERRFRLPENAKVEEVKANMENGVLTVTVPKMEKKPEVNSIDISG

Homology

[Close]

BLAST of IVF0024265 vs. ExPASy Swiss-Prot
Match: P13853 (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 240.0 bits (611), Expect = 1.8e-62
Identity = 119/157 (75.80%), Postives = 141/157 (89.81%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNMFDPFSSDVWDPFEGFPFSNSLANVPS---SAFSNTRIDWKETPEA 60
           MSLIPSIFGGRR+N+FDPFS DV+DPFEGF   + LAN P+   +AF+N ++DW+ETPEA
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEA 60

Query: 61  HIFKADLPGIKKEDVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFERRFRLPE 120
           H+FKADLPG++KE+VKVEVE+G +LQISGERS E EEKNDKWHR+ERSSGKF RRFRLPE
Sbjct: 61  HVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPE 120

Query: 121 NAKVEEVKANMENGVLTVTVPKM-EKKPEVNSIDISG 154
           NAK+EE+KA+MENGVL+VTVPK+ EKKPEV SIDISG
Sbjct: 121 NAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of IVF0024265 vs. ExPASy Swiss-Prot
Match: P19037 (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 9.0e-62
Identity = 123/159 (77.36%), Postives = 139/159 (87.42%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNMFDPFSSDVWDPFEG-FPFSNSLANVPS----SAFSNTRIDWKETP 60
           MSLIPSIFGGRRSN+FDPFS D+WDPFEG F  S++LAN  +    +AF+N R+DWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60

Query: 61  EAHIFKADLPGIKKEDVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFERRFRL 120
           EAH+FKADLPG+KKE+VKVEVE+  VLQISGERSKE EEKNDKWHR+ER+SGKF RRFRL
Sbjct: 61  EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRL 120

Query: 121 PENAKVEEVKANMENGVLTVTVPKM-EKKPEVNSIDISG 154
           PENAK+EEVKA MENGVLTV VPK  EKKP+V SIDISG
Sbjct: 121 PENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of IVF0024265 vs. ExPASy Swiss-Prot
Match: P27880 (18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 2.6e-61
Identity = 121/158 (76.58%), Postives = 141/158 (89.24%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNMFDPFSSDVWDPFEGFPFSNSL--ANVP--SSAFSNTRIDWKETPE 60
           MSLIPS FGGRRSN+FDPFS DVWDPF+ FPF+NS   A+ P  +SAF +TR+DWKETPE
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSALSASFPRENSAFVSTRVDWKETPE 60

Query: 61  AHIFKADLPGIKKEDVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFERRFRLP 120
           AH+FKADLPG+KKE+VKVE+E+ RVLQISGERS E+E+KND+WHR+ERSSGKF RRFRLP
Sbjct: 61  AHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLP 120

Query: 121 ENAKVEEVKANMENGVLTVTVPKME-KKPEVNSIDISG 154
           ENAK+++VKA MENGVLTVTVPK E KKPEV +IDISG
Sbjct: 121 ENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158

[Close]

BLAST of IVF0024265 vs. ExPASy Swiss-Prot
Match: P27396 (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 5.8e-61
Identity = 119/157 (75.80%), Postives = 138/157 (87.90%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNMFDPFSSDVWDPFEGFPFSNSLAN---VPSSAFSNTRIDWKETPEA 60
           MS+IPS FGGRRSN+FDPFS DVWDPF+ FP   S A+     ++AF NT IDWKETP+A
Sbjct: 1   MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTSSASEFGKETAAFVNTHIDWKETPQA 60

Query: 61  HIFKADLPGIKKEDVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFERRFRLPE 120
           H+FKADLPG+KKE+VKVE+EEG+VLQISGER+KE+EEKNDKWHR+ERSSGKF RRFRLPE
Sbjct: 61  HVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPE 120

Query: 121 NAKVEEVKANMENGVLTVTVPKME-KKPEVNSIDISG 154
           NAKV+EVKA M NGV+TVTVPK+E KKPEV +IDISG
Sbjct: 121 NAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157

[Close]

BLAST of IVF0024265 vs. ExPASy Swiss-Prot
Match: P02519 (17.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 4.9e-60
Identity = 114/154 (74.03%), Postives = 139/154 (90.26%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNMFDPFSSDVWDPFEGFPFSNSLANVPSSAFSNTRIDWKETPEAHIF 60
           MSLIPS FGGRRS++FDPFS DVWDPF+ FPF +SL +  +SAF +TR+DWKETPEAH+F
Sbjct: 1   MSLIPSFFGGRRSSVFDPFSLDVWDPFKDFPFPSSL-SAENSAFVSTRVDWKETPEAHVF 60

Query: 61  KADLPGIKKEDVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFERRFRLPENAK 120
           KAD+PG+KKE+VK+E+++GRVLQISGER+ E+E+KND WHR+ERSSGK  RRFRLPENAK
Sbjct: 61  KADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAK 120

Query: 121 VEEVKANMENGVLTVTVPKME-KKPEVNSIDISG 154
           V++VKA+MENGVLTVTVPK E KKP+V +IDISG
Sbjct: 121 VDQVKASMENGVLTVTVPKEEIKKPDVKAIDISG 153

[Close]

BLAST of IVF0024265 vs. ExPASy TrEMBL
Match: A0A1S3CN24 (17.6 kDa class I heat shock protein 3-like OS=Cucumis melo OX=3656 GN=LOC103502661 PE=3 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 4.9e-79
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNMFDPFSSDVWDPFEGFPFSNSLANVPSSAFSNTRIDWKETPEAHIF 60
           MSLIPSIFGGRRSNMFDPFSSDVWDPFEGFPFSNSLANVPSSAFSNTRIDWKETPEAHIF
Sbjct: 1   MSLIPSIFGGRRSNMFDPFSSDVWDPFEGFPFSNSLANVPSSAFSNTRIDWKETPEAHIF 60

Query: 61  KADLPGIKKEDVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFERRFRLPENAK 120
           KADLPGIKKEDVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFERRFRLPENAK
Sbjct: 61  KADLPGIKKEDVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFERRFRLPENAK 120

Query: 121 VEEVKANMENGVLTVTVPKMEKKPEVNSIDISG 154
           VEEVKANMENGVLTVTVPKMEKKPEVNSIDISG
Sbjct: 121 VEEVKANMENGVLTVTVPKMEKKPEVNSIDISG 153

[Close]

BLAST of IVF0024265 vs. ExPASy TrEMBL
Match: A0A5D3DH18 (17.6 kDa class I heat shock protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75208G00010 PE=3 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.9e-71
Identity = 142/159 (89.31%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNMFDPFSSDVWDPFEGFPFSNSLANVPS-----SAFSNTRIDWKETP 60
           MSLIPSIFGGRRSN+FDPFS D+WDPFEGFPFSNSLANVPS     SAF+NTRIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANVPSSAVETSAFANTRIDWKETP 60

Query: 61  EAHIFKADLPGIKKEDVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFERRFRL 120
           +AHIFKADLPGIKKE+VKVEVEEGRVLQISGERSKEQEEKNDKWHR+ERSSGKF RRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PENAKVEEVKANMENGVLTVTVPKM-EKKPEVNSIDISG 154
           PENAKVEEVKANMENGVLTVTVPK+ EKKPE+ SIDISG
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKVEEKKPEIKSIDISG 159

[Close]

BLAST of IVF0024265 vs. ExPASy TrEMBL
Match: A0A1S3CQK2 (17.6 kDa class I heat shock protein 3-like OS=Cucumis melo OX=3656 GN=LOC103503166 PE=3 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.9e-71
Identity = 142/159 (89.31%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNMFDPFSSDVWDPFEGFPFSNSLANVPS-----SAFSNTRIDWKETP 60
           MSLIPSIFGGRRSN+FDPFS D+WDPFEGFPFSNSLANVPS     SAF+NTRIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANVPSSAVETSAFANTRIDWKETP 60

Query: 61  EAHIFKADLPGIKKEDVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFERRFRL 120
           +AHIFKADLPGIKKE+VKVEVEEGRVLQISGERSKEQEEKNDKWHR+ERSSGKF RRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PENAKVEEVKANMENGVLTVTVPKM-EKKPEVNSIDISG 154
           PENAKVEEVKANMENGVLTVTVPK+ EKKPE+ SIDISG
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKVEEKKPEIKSIDISG 159

[Close]

BLAST of IVF0024265 vs. ExPASy TrEMBL
Match: A0A5D3DKH8 (17.6 kDa class I heat shock protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold610G00240 PE=3 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.1e-70
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 15  MFDPFSSDVWDPFEGFPFSNSLANVPSSAFSNTRIDWKETPEAHIFKADLPGIKKEDVKV 74
           MFDPFSSDVWDPFEGFPFSNSLANVPSSAFSNTRIDWKETPEAHIFKADLPGIKKEDVKV
Sbjct: 1   MFDPFSSDVWDPFEGFPFSNSLANVPSSAFSNTRIDWKETPEAHIFKADLPGIKKEDVKV 60

Query: 75  EVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFERRFRLPENAKVEEVKANMENGVLT 134
           EVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFERRFRLPENAKVEEVKANMENGVLT
Sbjct: 61  EVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFERRFRLPENAKVEEVKANMENGVLT 120

Query: 135 VTVPKMEKKPEVNSIDISG 154
           VTVPKMEKKPEVNSIDISG
Sbjct: 121 VTVPKMEKKPEVNSIDISG 139

[Close]

BLAST of IVF0024265 vs. ExPASy TrEMBL
Match: A0A5D3BEM2 (18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G001020 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 9.3e-70
Identity = 140/159 (88.05%), Postives = 149/159 (93.71%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNMFDPFSSDVWDPFEGFPFSNSLANVPS-----SAFSNTRIDWKETP 60
           M+LIPSIFGGRRSN+FDPFS D+WDPFEGF FSNSLAN+PS     SAF+NTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  EAHIFKADLPGIKKEDVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFERRFRL 120
           +AHIFKADLPGIKKE+VKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKF RRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKANMENGVLTVTVPKM-EKKPEVNSIDISG 154
           PENAKVEEVKANMENGVLTVTVPKM EKKPE+ SIDI+G
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of IVF0024265 vs. NCBI nr
Match: XP_008464901.1 (PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis melo])

HSP 1 Score: 305 bits (781), Expect = 1.68e-104
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNMFDPFSSDVWDPFEGFPFSNSLANVPSSAFSNTRIDWKETPEAHIF 60
           MSLIPSIFGGRRSNMFDPFSSDVWDPFEGFPFSNSLANVPSSAFSNTRIDWKETPEAHIF
Sbjct: 1   MSLIPSIFGGRRSNMFDPFSSDVWDPFEGFPFSNSLANVPSSAFSNTRIDWKETPEAHIF 60

Query: 61  KADLPGIKKEDVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFERRFRLPENAK 120
           KADLPGIKKEDVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFERRFRLPENAK
Sbjct: 61  KADLPGIKKEDVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFERRFRLPENAK 120

Query: 121 VEEVKANMENGVLTVTVPKMEKKPEVNSIDISG 153
           VEEVKANMENGVLTVTVPKMEKKPEVNSIDISG
Sbjct: 121 VEEVKANMENGVLTVTVPKMEKKPEVNSIDISG 153

[Close]

BLAST of IVF0024265 vs. NCBI nr
Match: XP_008465538.1 (PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis melo] >KAA0051493.1 17.6 kDa class I heat shock protein 3-like [Cucumis melo var. makuwa] >TYK22768.1 17.6 kDa class I heat shock protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 279 bits (714), Expect = 3.41e-94
Identity = 142/159 (89.31%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNMFDPFSSDVWDPFEGFPFSNSLANVPSSA-----FSNTRIDWKETP 60
           MSLIPSIFGGRRSN+FDPFS D+WDPFEGFPFSNSLANVPSSA     F+NTRIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANVPSSAVETSAFANTRIDWKETP 60

Query: 61  EAHIFKADLPGIKKEDVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFERRFRL 120
           +AHIFKADLPGIKKE+VKVEVEEGRVLQISGERSKEQEEKNDKWHR+ERSSGKF RRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PENAKVEEVKANMENGVLTVTVPKME-KKPEVNSIDISG 153
           PENAKVEEVKANMENGVLTVTVPK+E KKPE+ SIDISG
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKVEEKKPEIKSIDISG 159

[Close]

BLAST of IVF0024265 vs. NCBI nr
Match: KAA0051538.1 (17.6 kDa class I heat shock protein 3-like [Cucumis melo var. makuwa] >TYK24126.1 17.6 kDa class I heat shock protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 277 bits (709), Expect = 9.98e-94
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 15  MFDPFSSDVWDPFEGFPFSNSLANVPSSAFSNTRIDWKETPEAHIFKADLPGIKKEDVKV 74
           MFDPFSSDVWDPFEGFPFSNSLANVPSSAFSNTRIDWKETPEAHIFKADLPGIKKEDVKV
Sbjct: 1   MFDPFSSDVWDPFEGFPFSNSLANVPSSAFSNTRIDWKETPEAHIFKADLPGIKKEDVKV 60

Query: 75  EVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFERRFRLPENAKVEEVKANMENGVLT 134
           EVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFERRFRLPENAKVEEVKANMENGVLT
Sbjct: 61  EVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFERRFRLPENAKVEEVKANMENGVLT 120

Query: 135 VTVPKMEKKPEVNSIDISG 153
           VTVPKMEKKPEVNSIDISG
Sbjct: 121 VTVPKMEKKPEVNSIDISG 139

[Close]

BLAST of IVF0024265 vs. NCBI nr
Match: XP_038891795.1 (17.6 kDa class I heat shock protein 3-like [Benincasa hispida])

HSP 1 Score: 277 bits (709), Expect = 1.97e-93
Identity = 142/159 (89.31%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNMFDPFSSDVWDPFEGFPFSNSLANVPSSA-----FSNTRIDWKETP 60
           M+LIPSIFGGRRSN+FDPFS DVWDPFEGFPFS+SLAN+PSSA     F+NTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  EAHIFKADLPGIKKEDVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFERRFRL 120
           EAHIFKADLPGIKKE+VKVEVEEG+VLQISGERSKEQEEKNDKWHRIERSSGKF RRFRL
Sbjct: 61  EAHIFKADLPGIKKEEVKVEVEEGQVLQISGERSKEQEEKNDKWHRIERSSGKFSRRFRL 120

Query: 121 PENAKVEEVKANMENGVLTVTVPKM-EKKPEVNSIDISG 153
           PENAKVEEVKANMENGVLTVTVPKM EKKPE+ SIDISG
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMVEKKPEIKSIDISG 159

[Close]

BLAST of IVF0024265 vs. NCBI nr
Match: XP_038892901.1 (18.1 kDa class I heat shock protein-like [Benincasa hispida])

HSP 1 Score: 277 bits (708), Expect = 2.80e-93
Identity = 140/159 (88.05%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNMFDPFSSDVWDPFEGFPFSNSLANVPSSA-----FSNTRIDWKETP 60
           M+LIPSIFGGRRSN+FDPFS D+WDPFEGFPFS+SLAN+PSSA     F+NTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFPFSSSLANIPSSARETSAFANTRIDWKETP 60

Query: 61  EAHIFKADLPGIKKEDVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFERRFRL 120
           EAHIFKADLPGIKKE+VKVEVEEGRVLQISGERSKEQEEKNDKWHR+ERSSGKF RRFRL
Sbjct: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKANMENGVLTVTVPKME-KKPEVNSIDISG 153
           PENAKVEEVKANMENGVLTVTVPKME KKPE+ +IDISG
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEEKKPEIKTIDISG 159

[Close]

BLAST of IVF0024265 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 240.0 bits (611), Expect = 1.3e-63
Identity = 119/157 (75.80%), Postives = 141/157 (89.81%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNMFDPFSSDVWDPFEGFPFSNSLANVPS---SAFSNTRIDWKETPEA 60
           MSLIPSIFGGRR+N+FDPFS DV+DPFEGF   + LAN P+   +AF+N ++DW+ETPEA
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEA 60

Query: 61  HIFKADLPGIKKEDVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFERRFRLPE 120
           H+FKADLPG++KE+VKVEVE+G +LQISGERS E EEKNDKWHR+ERSSGKF RRFRLPE
Sbjct: 61  HVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPE 120

Query: 121 NAKVEEVKANMENGVLTVTVPKM-EKKPEVNSIDISG 154
           NAK+EE+KA+MENGVL+VTVPK+ EKKPEV SIDISG
Sbjct: 121 NAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of IVF0024265 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 237.7 bits (605), Expect = 6.4e-63
Identity = 123/159 (77.36%), Postives = 139/159 (87.42%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNMFDPFSSDVWDPFEG-FPFSNSLANVPS----SAFSNTRIDWKETP 60
           MSLIPSIFGGRRSN+FDPFS D+WDPFEG F  S++LAN  +    +AF+N R+DWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60

Query: 61  EAHIFKADLPGIKKEDVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFERRFRL 120
           EAH+FKADLPG+KKE+VKVEVE+  VLQISGERSKE EEKNDKWHR+ER+SGKF RRFRL
Sbjct: 61  EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRL 120

Query: 121 PENAKVEEVKANMENGVLTVTVPKM-EKKPEVNSIDISG 154
           PENAK+EEVKA MENGVLTV VPK  EKKP+V SIDISG
Sbjct: 121 PENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of IVF0024265 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 231.9 bits (590), Expect = 3.5e-61
Identity = 115/157 (73.25%), Postives = 137/157 (87.26%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNMFDPFSSDVWDPFEGFPFSNSLANVPS---SAFSNTRIDWKETPEA 60
           MSL+PS FGGRR+N+FDPFS DVWDPFEGF  +  L N P+   +AF+N ++DW+ETPEA
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGF-LTPGLTNAPAKDVAAFTNAKVDWRETPEA 60

Query: 61  HIFKADLPGIKKEDVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFERRFRLPE 120
           H+FKAD+PG+KKE+VKVEVE+G +LQISGERS E EEK+D WHR+ERSSGKF RRFRLPE
Sbjct: 61  HVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPE 120

Query: 121 NAKVEEVKANMENGVLTVTVPKM-EKKPEVNSIDISG 154
           NAKVEEVKA+MENGVL+VTVPK+ E KPEV S+DISG
Sbjct: 121 NAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of IVF0024265 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 201.1 bits (510), Expect = 6.6e-52
Identity = 106/158 (67.09%), Postives = 130/158 (82.28%), Query Frame = 0


Query: 1   MSLIPSIFG-GRRSN-MFDPFSSDVWDPFEGFPFSNSLANVPSSAFSNTRIDWKETPEAH 60
           MSLIPS FG  RRSN +FDPFS DVWDPF+   F +SL+   +SA +N R+DWKET EAH
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSG-ETSAITNARVDWKETAEAH 60

Query: 61  IFKADLPGIKKEDVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFERRFRLPEN 120
           +FKADLPG+KKE+VKVE+E+  VL+ISGER  E+EEK D WHR+ERSSG+F R+F+LPEN
Sbjct: 61  VFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPEN 120

Query: 121 AKVEEVKANMENGVLTVTVPKME---KKPEVNSIDISG 154
            K+++VKA+MENGVLTVTVPK+E   KK +V SIDISG
Sbjct: 121 VKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

[Close]

BLAST of IVF0024265 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 199.9 bits (507), Expect = 1.5e-51
Identity = 104/155 (67.10%), Postives = 126/155 (81.29%), Query Frame = 0


Query: 1   MSLIPSIF-GGRRSNMFDPFSSDVWDPFEGFPFSNSLANVPSSAFSNTRIDWKETPEAHI 60
           MS+IPS F   RRSN+FDPFS DVWDPF+    ++S  +  +SA  N R+DW+ETPEAH+
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFSLDVWDPFK--ELTSSSLSRENSAIVNARVDWRETPEAHV 60

Query: 61  FKADLPGIKKEDVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFERRFRLPENA 120
           FKADLPG+KKE+VKVE+EE  VL+ISGER  E+E+KND WHR+ERSSG+F RRFRLPEN 
Sbjct: 61  FKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENV 120

Query: 121 KVEEVKANMENGVLTVTVPKME-KKPEVNSIDISG 154
           K+++VKA MENGVLTVTVPK E KK +V SI ISG
Sbjct: 121 KMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

The following BLAST results are available for this feature:

BLAST of IVF0024265 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P13853	1.8e-62	75.80	17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6...	[more]
P19037	9.0e-62	77.36	18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 P...	[more]
P27880	2.6e-61	76.58	18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 S...	[more]
P27396	5.8e-61	75.80	17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1	[more]
P02519	4.9e-60	74.03	17.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=...	[more]

BLAST of IVF0024265 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CN24	4.9e-79	100.00	17.6 kDa class I heat shock protein 3-like OS=Cucumis melo OX=3656 GN=LOC1035026...	[more]
A0A5D3DH18	2.9e-71	89.31	17.6 kDa class I heat shock protein 3-like OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CQK2	2.9e-71	89.31	17.6 kDa class I heat shock protein 3-like OS=Cucumis melo OX=3656 GN=LOC1035031...	[more]
A0A5D3DKH8	1.1e-70	100.00	17.6 kDa class I heat shock protein 3-like OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A5D3BEM2	9.3e-70	88.05	18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of IVF0024265 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464901.1	1.68e-104	100.00	PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis melo]	[more]
XP_008465538.1	3.41e-94	89.31	PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis melo] >KAA0051493...	[more]
KAA0051538.1	9.98e-94	100.00	17.6 kDa class I heat shock protein 3-like [Cucumis melo var. makuwa] >TYK24126....	[more]
XP_038891795.1	1.97e-93	89.31	17.6 kDa class I heat shock protein 3-like [Benincasa hispida]	[more]
XP_038892901.1	2.80e-93	88.05	18.1 kDa class I heat shock protein-like [Benincasa hispida]	[more]

BLAST of IVF0024265 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53540.1	1.3e-63	75.80	HSP20-like chaperones superfamily protein	[more]
AT5G59720.1	6.4e-63	77.36	heat shock protein 18.2	[more]
AT3G46230.1	3.5e-61	73.25	heat shock protein 17.4	[more]
AT1G07400.1	6.6e-52	67.09	HSP20-like chaperones superfamily protein	[more]
AT2G29500.1	1.5e-51	67.10	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 9..153 e-value: 4.8E-51 score: 174.4
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 19..152
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 50..151 e-value: 2.4E-30 score: 104.7
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 40..153 score: 31.005432
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 2..153
None	No IPR available	PANTHER	PTHR11527:SF336	SUBFAMILY NOT NAMED	coord: 2..153
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 48..139 e-value: 7.69988E-56 score: 168.252
IPR007052	CS domain	PROSITE	PS51203	CS	coord: 44..150 score: 9.082064

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0024265.1	IVF0024265.1	mRNA