IVF0024146 (gene) Melon (IVF77) v1

Overview


Name	IVF0024146
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	UPF0057 membrane protein
Location	chr02: 11810026 .. 11810645 (-)
RNA-Seq Expression	IVF0024146
Synteny	IVF0024146

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCATTTGGGAGTCTGCCCATACCTAACCTACCCTCCTCTTCCTCGTCTCGTTTTTCTGAATTTGCTCAGACCGCCATTAAAACATGCCATCTCGCTGTGAAATCTTCTGCGAGATTCTCATTGCTATCTTGATTCCTCCTTTGGGCGTCTGTCTCCGGCATGGATGTTGTACCGTACGTTTCTGATTCTTTTCTTCTTTTGTTTTAATTTTTCCTCTCTCTCTCTCTTTTTTTCTTTTTATTAATTCGAATGTAATTCTGATTTATGATTGCTTGTGGTTGTAGGTTGAGTTTTGTATATGCCTTCTGTTGACGTTTCTCGGTTATGTTCCTGGAATTATCTACGCTTTGTATGCCATCGTTTTCATCGATCGCGATGAGTACTTCGATGAATACAGACGTCCTCTGTATGCGCCGGCCTAGATTCCATAGGTATTTCGCTTTTATATCATTTCTTGTGCTGTAATTATTCCGAATTTCATCTGTTTGCGATTGGATCTGTGTATCGTGTATTCGCGTTCTGTTTCTGCTAAAACCCTTGTATTTCTTGCTAACTTCATCCTGATGGAGTAACCAATTAATCGATGTTGTTAATGGAACGACTACTATTTGCTTGTTCA

mRNA sequence

CCCATTTGGGAGTCTGCCCATACCTAACCTACCCTCCTCTTCCTCGTCTCGTTTTTCTGAATTTGCTCAGACCGCCATTAAAACATGCCATCTCGCTGTGAAATCTTCTGCGAGATTCTCATTGCTATCTTGATTCCTCCTTTGGGCGTCTGTCTCCGGCATGGATGTTGTACCGTTGAGTTTTGTATATGCCTTCTGTTGACGTTTCTCGGTTATGTTCCTGGAATTATCTACGCTTTGTATGCCATCGTTTTCATCGATCGCGATGAGTACTTCGATGAATACAGACGTCCTCTGTATGCGCCGGCCTAGATTCCATAGGTATTTCGCTTTTATATCATTTCTTGTGCTGTAATTATTCCGAATTTCATCTGTTTGCGATTGGATCTGTGTATCGTGTATTCGCGTTCTGTTTCTGCTAAAACCCTTGTATTTCTTGCTAACTTCATCCTGATGGAGTAACCAATTAATCGATGTTGTTAATGGAACGACTACTATTTGCTTGTTCA

Coding sequence (CDS)

ATGCCATCTCGCTGTGAAATCTTCTGCGAGATTCTCATTGCTATCTTGATTCCTCCTTTGGGCGTCTGTCTCCGGCATGGATGTTGTACCGTTGAGTTTTGTATATGCCTTCTGTTGACGTTTCTCGGTTATGTTCCTGGAATTATCTACGCTTTGTATGCCATCGTTTTCATCGATCGCGATGAGTACTTCGATGAATACAGACGTCCTCTGTATGCGCCGGCCTAG

Protein sequence

MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDRDEYFDEYRRPLYAPA

Homology

[Close]

BLAST of IVF0024146 vs. ExPASy Swiss-Prot
Match: Q9SUI0 (UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana OX=3702 GN=At4g30660 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 4.2e-28
Identity = 57/73 (78.08%), Postives = 64/73 (87.67%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MPS CEI CEI+IAIL+PPLGVC R GCCTVEF ICL+LT LGYVPGIIYA+Y IVF  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 DEYFDEYRRPLYA 74
          +EYFDEYRRP+Y+
Sbjct: 61 EEYFDEYRRPIYS 73

[Close]

BLAST of IVF0024146 vs. ExPASy Swiss-Prot
Match: O82232 (UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana OX=3702 GN=At2g24040 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 9.3e-28
Identity = 56/72 (77.78%), Postives = 64/72 (88.89%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          M S CE+ CEI IAIL+PP+GVCLRHGCCTVEF ICL+LT LGY+PGIIYA+YAI F+ R
Sbjct: 1  MASSCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHR 60

Query: 61 DEYFDEYRRPLY 73
          DEYFDEYRRP+Y
Sbjct: 61 DEYFDEYRRPIY 72

[Close]

BLAST of IVF0024146 vs. ExPASy Swiss-Prot
Match: Q9M095 (UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana OX=3702 GN=At4g30650 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 4.2e-20
Identity = 46/61 (75.41%), Postives = 53/61 (86.89%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          M S  E+FCEILIAIL+PPLGVCL+ GCCTVEF ICL+LT LGY+PGIIYALY IVF +R
Sbjct: 1  MASNMEVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIVFQNR 60

Query: 61 D 62
          +
Sbjct: 61 E 61

[Close]

BLAST of IVF0024146 vs. ExPASy Swiss-Prot
Match: Q9LRI7 (Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica OX=39947 GN=OSR8 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.3e-18
Identity = 44/64 (68.75%), Postives = 53/64 (82.81%), Query Frame = 0


Query: 4  RCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDRDEY 63
          RC  F EIL+AI++PPLGV LR GCC++EFCICLLLT LGYVPGIIYA+Y +V +D D+Y
Sbjct: 5  RCCTFLEILLAIILPPLGVFLRFGCCSMEFCICLLLTILGYVPGIIYAVYVLVALDSDQY 64

Query: 64 FDEY 68
            EY
Sbjct: 65 QREY 68

[Close]

BLAST of IVF0024146 vs. ExPASy Swiss-Prot
Match: A2Y075 (Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica OX=39946 GN=LTI6B PE=3 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 3.9e-10
Identity = 34/46 (73.91%), Postives = 40/46 (86.96%), Query Frame = 0


Query: 10 EILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAI 56
          +ILIAI++PPLGV L+ G C  EF ICLLLTFLGY+PGIIYA+YAI
Sbjct: 9  DILIAIILPPLGVFLKFG-CGHEFWICLLLTFLGYIPGIIYAIYAI 53

[Close]

BLAST of IVF0024146 vs. ExPASy TrEMBL
Match: A0A1S3B9R0 (UPF0057 membrane protein At4g30660 OS=Cucumis melo OX=3656 GN=LOC103487341 PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 9.6e-36
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          DEYFDEYRRPLYAPA
Sbjct: 61 DEYFDEYRRPLYAPA 75

[Close]

BLAST of IVF0024146 vs. ExPASy TrEMBL
Match: A0A0A0LTR2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257300 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 3.6e-35
Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          +EYFDEYRRPLYAPA
Sbjct: 61 NEYFDEYRRPLYAPA 75

[Close]

BLAST of IVF0024146 vs. ExPASy TrEMBL
Match: A0A6J1C169 (UPF0057 membrane protein At4g30660-like OS=Momordica charantia OX=3673 GN=LOC111007433 PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.2e-33
Identity = 71/75 (94.67%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGY+PGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          D+YFDEYRRPLY  A
Sbjct: 61 DQYFDEYRRPLYVLA 75

[Close]

BLAST of IVF0024146 vs. ExPASy TrEMBL
Match: A0A6J1HL57 (UPF0057 membrane protein At4g30660-like OS=Cucurbita maxima OX=3661 GN=LOC111465149 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.0e-33
Identity = 70/75 (93.33%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          M +RCEIFCEILIAILIPPLGVC RHGCCTVEFCICLLLTFLGYVPGIIYALY I+FIDR
Sbjct: 1  MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          DEYFDEYRRPLYAPA
Sbjct: 61 DEYFDEYRRPLYAPA 75

[Close]

BLAST of IVF0024146 vs. ExPASy TrEMBL
Match: A0A6J1ED38 (UPF0057 membrane protein At4g30660-like OS=Cucurbita moschata OX=3662 GN=LOC111433066 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.0e-33
Identity = 70/75 (93.33%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          M +RCEIFCEILIAILIPPLGVC RHGCCTVEFCICLLLTFLGYVPGIIYALY I+FIDR
Sbjct: 1  MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR 60

Query: 61 DEYFDEYRRPLYAPA 76
          DEYFDEYRRPLYAPA
Sbjct: 61 DEYFDEYRRPLYAPA 75

[Close]

BLAST of IVF0024146 vs. NCBI nr
Match: XP_008443846.1 (PREDICTED: UPF0057 membrane protein At4g30660 [Cucumis melo])

HSP 1 Score: 156 bits (395), Expect = 4.16e-48
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 DEYFDEYRRPLYAPA 75
          DEYFDEYRRPLYAPA
Sbjct: 61 DEYFDEYRRPLYAPA 75

[Close]

BLAST of IVF0024146 vs. NCBI nr
Match: XP_004146673.1 (UPF0057 membrane protein At4g30660 [Cucumis sativus] >KGN65173.1 hypothetical protein Csa_019763 [Cucumis sativus])

HSP 1 Score: 154 bits (390), Expect = 2.41e-47
Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60

Query: 61 DEYFDEYRRPLYAPA 75
          +EYFDEYRRPLYAPA
Sbjct: 61 NEYFDEYRRPLYAPA 75

[Close]

BLAST of IVF0024146 vs. NCBI nr
Match: XP_038879686.1 (UPF0057 membrane protein At4g30660-like [Benincasa hispida])

HSP 1 Score: 154 bits (389), Expect = 3.43e-47
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLT LGYVPGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYVPGIIYALYAIVFIDR 60

Query: 61 DEYFDEYRRPLYAPA 75
          DEYFDEYRRPLYAPA
Sbjct: 61 DEYFDEYRRPLYAPA 75

[Close]

BLAST of IVF0024146 vs. NCBI nr
Match: XP_022135490.1 (UPF0057 membrane protein At4g30660-like [Momordica charantia])

HSP 1 Score: 149 bits (377), Expect = 2.33e-45
Identity = 71/75 (94.67%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGY+PGIIYALYAIVFIDR
Sbjct: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYIPGIIYALYAIVFIDR 60

Query: 61 DEYFDEYRRPLYAPA 75
          D+YFDEYRRPLY  A
Sbjct: 61 DQYFDEYRRPLYVLA 75

[Close]

BLAST of IVF0024146 vs. NCBI nr
Match: XP_022925751.1 (UPF0057 membrane protein At4g30660-like [Cucurbita moschata] >XP_022925759.1 UPF0057 membrane protein At4g30660-like [Cucurbita moschata] >XP_022965238.1 UPF0057 membrane protein At4g30660-like [Cucurbita maxima] >XP_022965241.1 UPF0057 membrane protein At4g30660-like [Cucurbita maxima] >XP_023521009.1 UPF0057 membrane protein At4g30660-like [Cucurbita pepo subsp. pepo] >XP_023521011.1 UPF0057 membrane protein At4g30660-like [Cucurbita pepo subsp. pepo] >XP_023521012.1 UPF0057 membrane protein At4g30660-like [Cucurbita pepo subsp. pepo] >XP_023529545.1 UPF0057 membrane protein At4g30660-like [Cucurbita pepo subsp. pepo] >XP_023529546.1 UPF0057 membrane protein At4g30660-like [Cucurbita pepo subsp. pepo] >KAG7035687.1 UPF0057 membrane protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 149 bits (375), Expect = 4.70e-45
Identity = 70/75 (93.33%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          M +RCEIFCEILIAILIPPLGVC RHGCCTVEFCICLLLTFLGYVPGIIYALY I+FIDR
Sbjct: 1  MATRCEIFCEILIAILIPPLGVCFRHGCCTVEFCICLLLTFLGYVPGIIYALYVIIFIDR 60

Query: 61 DEYFDEYRRPLYAPA 75
          DEYFDEYRRPLYAPA
Sbjct: 61 DEYFDEYRRPLYAPA 75

[Close]

BLAST of IVF0024146 vs. TAIR 10
Match: AT4G28088.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 127.5 bits (319), Expect = 4.6e-30
Identity = 58/72 (80.56%), Postives = 66/72 (91.67%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          M + CEI CEI+IAILIPPLGVCLRHGCCT EF ICL+LT LGYVPGIIYALYAIV++DR
Sbjct: 1  MANGCEICCEIMIAILIPPLGVCLRHGCCTTEFMICLILTLLGYVPGIIYALYAIVYVDR 60

Query: 61 DEYFDEYRRPLY 73
          D++FDEYRRPL+
Sbjct: 61 DQFFDEYRRPLF 72

[Close]

BLAST of IVF0024146 vs. TAIR 10
Match: AT4G30660.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 124.8 bits (312), Expect = 3.0e-29
Identity = 57/73 (78.08%), Postives = 64/73 (87.67%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MPS CEI CEI+IAIL+PPLGVC R GCCTVEF ICL+LT LGYVPGIIYA+Y IVF  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 DEYFDEYRRPLYA 74
          +EYFDEYRRP+Y+
Sbjct: 61 EEYFDEYRRPIYS 73

[Close]

BLAST of IVF0024146 vs. TAIR 10
Match: AT4G30660.2 (Low temperature and salt responsive protein family )

HSP 1 Score: 124.8 bits (312), Expect = 3.0e-29
Identity = 57/73 (78.08%), Postives = 64/73 (87.67%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          MPS CEI CEI+IAIL+PPLGVC R GCCTVEF ICL+LT LGYVPGIIYA+Y IVF  R
Sbjct: 1  MPSNCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHR 60

Query: 61 DEYFDEYRRPLYA 74
          +EYFDEYRRP+Y+
Sbjct: 61 EEYFDEYRRPIYS 73

[Close]

BLAST of IVF0024146 vs. TAIR 10
Match: AT2G24040.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 123.6 bits (309), Expect = 6.6e-29
Identity = 56/72 (77.78%), Postives = 64/72 (88.89%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          M S CE+ CEI IAIL+PP+GVCLRHGCCTVEF ICL+LT LGY+PGIIYA+YAI F+ R
Sbjct: 1  MASSCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHR 60

Query: 61 DEYFDEYRRPLY 73
          DEYFDEYRRP+Y
Sbjct: 61 DEYFDEYRRPIY 72

[Close]

BLAST of IVF0024146 vs. TAIR 10
Match: AT4G30650.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 98.2 bits (243), Expect = 3.0e-21
Identity = 46/61 (75.41%), Postives = 53/61 (86.89%), Query Frame = 0


Query: 1  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTFLGYVPGIIYALYAIVFIDR 60
          M S  E+FCEILIAIL+PPLGVCL+ GCCTVEF ICL+LT LGY+PGIIYALY IVF +R
Sbjct: 1  MASNMEVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIVFQNR 60

Query: 61 D 62
          +
Sbjct: 61 E 61

The following BLAST results are available for this feature:

BLAST of IVF0024146 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SUI0	4.2e-28	78.08	UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana OX=3702 GN=At4g30660 ...	[more]
O82232	9.3e-28	77.78	UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana OX=3702 GN=At2g24040 ...	[more]
Q9M095	4.2e-20	75.41	UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana OX=3702 GN=At4g30650 ...	[more]
Q9LRI7	1.3e-18	68.75	Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica OX=39947 GN=OSR8 PE=3 S...	[more]
A2Y075	3.9e-10	73.91	Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica OX=39946 GN=LTI6B PE=3 S...	[more]

BLAST of IVF0024146 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B9R0	9.6e-36	100.00	UPF0057 membrane protein At4g30660 OS=Cucumis melo OX=3656 GN=LOC103487341 PE=3 ...	[more]
A0A0A0LTR2	3.6e-35	98.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257300 PE=3 SV=1	[more]
A0A6J1C169	1.2e-33	94.67	UPF0057 membrane protein At4g30660-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1HL57	2.0e-33	93.33	UPF0057 membrane protein At4g30660-like OS=Cucurbita maxima OX=3661 GN=LOC111465...	[more]
A0A6J1ED38	2.0e-33	93.33	UPF0057 membrane protein At4g30660-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of IVF0024146 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443846.1	4.16e-48	100.00	PREDICTED: UPF0057 membrane protein At4g30660 [Cucumis melo]	[more]
XP_004146673.1	2.41e-47	98.67	UPF0057 membrane protein At4g30660 [Cucumis sativus] >KGN65173.1 hypothetical pr...	[more]
XP_038879686.1	3.43e-47	98.67	UPF0057 membrane protein At4g30660-like [Benincasa hispida]	[more]
XP_022135490.1	2.33e-45	94.67	UPF0057 membrane protein At4g30660-like [Momordica charantia]	[more]
XP_022925751.1	4.70e-45	93.33	UPF0057 membrane protein At4g30660-like [Cucurbita moschata] >XP_022925759.1 UPF...	[more]

BLAST of IVF0024146 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28088.1	4.6e-30	80.56	Low temperature and salt responsive protein family	[more]
AT4G30660.1	3.0e-29	78.08	Low temperature and salt responsive protein family	[more]
AT4G30660.2	3.0e-29	78.08	Low temperature and salt responsive protein family	[more]
AT2G24040.1	6.6e-29	77.78	Low temperature and salt responsive protein family	[more]
AT4G30650.1	3.0e-21	75.41	Low temperature and salt responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000612	Proteolipid membrane potential modulator	PFAM	PF01679	Pmp3	coord: 9..56 e-value: 5.4E-17 score: 61.7
IPR000612	Proteolipid membrane potential modulator	PANTHER	PTHR21659	HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED	coord: 1..73
IPR000612	Proteolipid membrane potential modulator	PROSITE	PS01309	UPF0057	coord: 12..27
None	No IPR available	PANTHER	PTHR21659:SF93	BNAA03G50460D PROTEIN	coord: 1..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0024146.2	IVF0024146.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane